component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g29510 FvH4_1g29510 FvH4_1g29510 FvH4_1g29510 FvH4_1g29510 FvH4_1g29510 FvH4_1g29510 FvH4_1g29510 |
| rosa_chinensis | RchiOBHm_Chr4g0387911 |
| rosa_laevigata | RLG00000018091 |
| rosa_multiflora | Rmu_sc0006221.1_g000008 Rmu_sc0012870.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00401020 Rroxscaffold_7G00208740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 475 |
| AcsI | RAATTY | 1 cut(s) | 37 |
| AcvI | CACGTG | 1 cut(s) | 142 |
| AfaI | GTAC | 2 cut(s) | 373, 492 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 302 |
| AflIII | ACRYGT | 1 cut(s) | 139 |
| AgsI | TTSAA | 3 cut(s) | 10, 86, 421 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 470 |
| AjnI | CCWGG | 1 cut(s) | 121 |
| AluBI | AGCT | 5 cut(s) | 98, 231, 346, 404, 430 |
| AluI | AGCT | 5 cut(s) | 98, 231, 346, 404, 430 |
| Alw21I | GWGCWC | 1 cut(s) | 348 |
| Alw26I | GTCTC | 1 cut(s) | 310 |
| ApeKI | GCWGC | 3 cut(s) | 228, 379, 401 |
| ApoI | RAATTY | 1 cut(s) | 37 |
| AspS9I | GGNCC | 1 cut(s) | 464 |
| AsuHPI | GGTGA | 1 cut(s) | 46 |
| AvaII | GGWCC | 1 cut(s) | 464 |
| BaeGI | GKGCMC | 1 cut(s) | 112 |
| BanII | GRGCYC | 2 cut(s) | 348, 441 |
| BbrPI | CACGTG | 1 cut(s) | 142 |
| Bbv12I | GWGCWC | 1 cut(s) | 348 |
| BbvI | GCAGC | 3 cut(s) | 240, 366, 413 |
| BccI | CCATC | 1 cut(s) | 473 |
| BciT130I | CCWGG | 1 cut(s) | 123 |
| BciVI | GTATCC | 1 cut(s) | 16 |
| BcoDI | GTCTC | 1 cut(s) | 310 |
| BfaI | CTAG | 1 cut(s) | 350 |
| BfuAI | ACCTGC | 1 cut(s) | 475 |
| BfuI | GTATCC | 1 cut(s) | 16 |
| BisI | GCNGC | 3 cut(s) | 229, 380, 402 |
| BlsI | GCNGC | 3 cut(s) | 230, 381, 403 |
| Bme1390I | CCNGG | 1 cut(s) | 123 |
| Bme18I | GGWCC | 1 cut(s) | 464 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 470 |
| BmgT120I | GGNCC | 1 cut(s) | 464 |
| BmrFI | CCNGG | 1 cut(s) | 123 |
| BpmI | CTGGAG | 1 cut(s) | 120 |
| BpuEI | CTTGAG | 2 cut(s) | 332, 362 |
| BsaAI | YACGTR | 1 cut(s) | 142 |
| BsaI | GGTCTC | 1 cut(s) | 310 |
| BsaJI | CCNNGG | 1 cut(s) | 441 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 474, 504 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 302 |
| Bse1I | ACTGG | 1 cut(s) | 184 |
| Bse3DI | GCAATG | 1 cut(s) | 75 |
| BseBI | CCWGG | 1 cut(s) | 123 |
| BseDI | CCNNGG | 1 cut(s) | 441 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 302 |
| BseMI | GCAATG | 1 cut(s) | 75 |
| BseMII | CTCAG | 1 cut(s) | 445 |
| BseNI | ACTGG | 1 cut(s) | 184 |
| BseSI | GKGCMC | 1 cut(s) | 112 |
| BseXI | GCAGC | 3 cut(s) | 240, 366, 413 |
| BsiHKAI | GWGCWC | 1 cut(s) | 348 |
| BslFI | GGGAC | 1 cut(s) | 253 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 302 |
| BsmAI | GTCTC | 1 cut(s) | 310 |
| BsmFI | GGGAC | 1 cut(s) | 253 |
| Bso31I | GGTCTC | 1 cut(s) | 310 |
| Bsp1286I | GDGCHC | 3 cut(s) | 112, 348, 441 |
| BspCNI | CTCAG | 1 cut(s) | 444 |
| BspHI | TCATGA | 1 cut(s) | 283 |
| BspMI | ACCTGC | 1 cut(s) | 475 |
| BspTNI | GGTCTC | 1 cut(s) | 310 |
| BsrDI | GCAATG | 1 cut(s) | 75 |
| BsrI | ACTGG | 1 cut(s) | 184 |
| BssECI | CCNNGG | 1 cut(s) | 441 |
| BssT1I | CCWWGG | 1 cut(s) | 441 |
| Bst2UI | CCWGG | 1 cut(s) | 123 |
| Bst4CI | ACNGT | 1 cut(s) | 411 |
| BstBAI | YACGTR | 1 cut(s) | 142 |
| BstDEI | CTNAG | 1 cut(s) | 431 |
| BstMAI | GTCTC | 1 cut(s) | 310 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 388, 436 |
| BstNI | CCWGG | 1 cut(s) | 123 |
| BstSCI | CCNGG | 1 cut(s) | 121 |
| BstSLI | GKGCMC | 1 cut(s) | 112 |
| BstV1I | GCAGC | 3 cut(s) | 240, 366, 413 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 49, 382 |
| BsuI | GTATCC | 1 cut(s) | 16 |
| BtsI | GCAGTG | 1 cut(s) | 363 |
| BtsIMutI | CAGTG | 1 cut(s) | 363 |
| BveI | ACCTGC | 1 cut(s) | 475 |
| CciI | TCATGA | 1 cut(s) | 283 |
| Cfr13I | GGNCC | 1 cut(s) | 464 |
| Csp6I | GTAC | 2 cut(s) | 372, 491 |
| CviAII | CATG | 4 cut(s) | 116, 151, 284, 376 |
| CviJI | RGCY | 9 cut(s) | 82, 98, 197, 204, 231, 346, 404, 430, 439 |
| CviKI_1 | RGCY | 9 cut(s) | 82, 98, 197, 204, 231, 346, 404, 430, 439 |
| CviQI | GTAC | 2 cut(s) | 372, 491 |
| DdeI | CTNAG | 1 cut(s) | 431 |
| DriI | GACNNNNNGTC | 1 cut(s) | 470 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 470 |
| Ecl136II | GAGCTC | 1 cut(s) | 346 |
| Eco130I | CCWWGG | 1 cut(s) | 441 |
| Eco24I | GRGCYC | 2 cut(s) | 348, 441 |
| Eco31I | GGTCTC | 1 cut(s) | 310 |
| Eco32I | GATATC | 1 cut(s) | 281 |
| Eco47I | GGWCC | 1 cut(s) | 464 |
| Eco53kI | GAGCTC | 1 cut(s) | 346 |
| Eco72I | CACGTG | 1 cut(s) | 142 |
| EcoICRI | GAGCTC | 1 cut(s) | 346 |
| EcoRI | GAATTC | 1 cut(s) | 37 |
| EcoRII | CCWGG | 1 cut(s) | 121 |
| EcoRV | GATATC | 1 cut(s) | 281 |
| EcoT14I | CCWWGG | 1 cut(s) | 441 |
| EcoT38I | GRGCYC | 2 cut(s) | 348, 441 |
| ErhI | CCWWGG | 1 cut(s) | 441 |
| FaeI | CATG | 4 cut(s) | 119, 154, 287, 379 |
| FaqI | GGGAC | 1 cut(s) | 253 |
| FatI | CATG | 4 cut(s) | 115, 150, 283, 375 |
| FauNDI | CATATG | 1 cut(s) | 327 |
| Fnu4HI | GCNGC | 3 cut(s) | 229, 380, 402 |
| FriOI | GRGCYC | 2 cut(s) | 348, 441 |
| Fsp4HI | GCNGC | 3 cut(s) | 229, 380, 402 |
| FspBI | CTAG | 1 cut(s) | 350 |
| GluI | GCNGC | 3 cut(s) | 229, 380, 402 |
| GsuI | CTGGAG | 1 cut(s) | 120 |
| Hin1II | CATG | 4 cut(s) | 119, 154, 287, 379 |
| HincII | GTYRAC | 1 cut(s) | 414 |
| HindII | GTYRAC | 1 cut(s) | 414 |
| HinfI | GANTC | 1 cut(s) | 307 |
| HpaI | GTTAAC | 1 cut(s) | 414 |
| HphI | GGTGA | 1 cut(s) | 46 |
| Hpy166II | GTNNAC | 1 cut(s) | 414 |
| Hpy188I | TCNGA | 2 cut(s) | 257, 434 |
| Hpy188III | TCNNGA | 5 cut(s) | 270, 284, 296, 311, 421 |
| Hpy8I | GTNNAC | 1 cut(s) | 414 |
| HpyAV | CCTTC | 3 cut(s) | 13, 98, 238 |
| HpyCH4III | ACNGT | 1 cut(s) | 411 |
| HpyCH4IV | ACGT | 2 cut(s) | 141, 493 |
| HpyCH4V | TGCA | 4 cut(s) | 68, 191, 331, 361 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 388, 436 |
| HpyF3I | CTNAG | 1 cut(s) | 431 |
| HpySE526I | ACGT | 2 cut(s) | 141, 493 |
| Hsp92II | CATG | 4 cut(s) | 119, 154, 287, 379 |
| KspAI | GTTAAC | 1 cut(s) | 414 |
| LmnI | GCTCC | 2 cut(s) | 258, 351 |
| LpnPI | CCDG | 9 cut(s) | 84, 108, 135, 148, 165, 287, 309, 368, 480 |
| Lsp1109I | GCAGC | 3 cut(s) | 240, 366, 413 |
| MaeI | CTAG | 1 cut(s) | 350 |
| MaeII | ACGT | 2 cut(s) | 141, 493 |
| MaeIII | GTNAC | 1 cut(s) | 454 |
| MhlI | GDGCHC | 3 cut(s) | 112, 348, 441 |
| MluCI | AATT | 2 cut(s) | 37, 87 |
| MlyI | GAGTC | 1 cut(s) | 316 |
| MmeI | TCCRAC | 1 cut(s) | 280 |
| MnlI | CCTC | 4 cut(s) | 25, 127, 346, 417 |
| MseI | TTAA | 1 cut(s) | 413 |
| MspA1I | CMGCKG | 1 cut(s) | 231 |
| MspR9I | CCNGG | 1 cut(s) | 123 |
| MvaI | CCWGG | 1 cut(s) | 123 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 388, 436 |
| NdeI | CATATG | 1 cut(s) | 327 |
| NlaIII | CATG | 4 cut(s) | 119, 154, 287, 379 |
| NmuCI | GTSAC | 1 cut(s) | 454 |
| PagI | TCATGA | 1 cut(s) | 283 |
| PfoI | TCCNGGA | 1 cut(s) | 121 |
| PkrI | GCNGC | 3 cut(s) | 230, 381, 403 |
| PleI | GAGTC | 1 cut(s) | 315 |
| PmaCI | CACGTG | 1 cut(s) | 142 |
| PmlI | CACGTG | 1 cut(s) | 142 |
| PpsI | GAGTC | 1 cut(s) | 315 |
| Ppu21I | YACGTR | 1 cut(s) | 142 |
| Psp124BI | GAGCTC | 1 cut(s) | 348 |
| Psp6I | CCWGG | 1 cut(s) | 121 |
| PspCI | CACGTG | 1 cut(s) | 142 |
| PspGI | CCWGG | 1 cut(s) | 121 |
| PspPI | GGNCC | 1 cut(s) | 464 |
| PvuII | CAGCTG | 1 cut(s) | 231 |
| RsaI | GTAC | 2 cut(s) | 373, 492 |
| RsaNI | GTAC | 2 cut(s) | 372, 491 |
| SacI | GAGCTC | 1 cut(s) | 348 |
| SaqAI | TTAA | 1 cut(s) | 413 |
| SatI | GCNGC | 3 cut(s) | 229, 380, 402 |
| Sau96I | GGNCC | 1 cut(s) | 464 |
| SchI | GAGTC | 1 cut(s) | 316 |
| ScrFI | CCNGG | 1 cut(s) | 123 |
| SduI | GDGCHC | 3 cut(s) | 112, 348, 441 |
| SinI | GGWCC | 1 cut(s) | 464 |
| SmlI | CTYRAG | 2 cut(s) | 311, 341 |
| SmoI | CTYRAG | 2 cut(s) | 311, 341 |
| Sse9I | AATT | 2 cut(s) | 37, 87 |
| SspMI | CTAG | 1 cut(s) | 350 |
| SstI | GAGCTC | 1 cut(s) | 348 |
| StyD4I | CCNGG | 1 cut(s) | 121 |
| StyI | CCWWGG | 1 cut(s) | 441 |
| TaaI | ACNGT | 1 cut(s) | 411 |
| TaiI | ACGT | 2 cut(s) | 144, 496 |
| TasI | AATT | 2 cut(s) | 37, 87 |
| Tru1I | TTAA | 1 cut(s) | 413 |
| Tru9I | TTAA | 1 cut(s) | 413 |
| TscAI | CASTG | 1 cut(s) | 363 |
| TseFI | GTSAC | 1 cut(s) | 454 |
| TseI | GCWGC | 3 cut(s) | 228, 379, 401 |
| Tsp45I | GTSAC | 1 cut(s) | 454 |
| TspDTI | ATGAA | 3 cut(s) | 32, 167, 171 |
| TspGWI | ACGGA | 1 cut(s) | 464 |
| TspRI | CASTG | 1 cut(s) | 363 |
| VpaK11BI | GGWCC | 1 cut(s) | 464 |
| XapI | RAATTY | 1 cut(s) | 37 |
| XspI | CTAG | 1 cut(s) | 350 |