Rmu_sc0012870.1_g000006
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012870.1
Physical Location & Seq
Forward (+)
41456 .. 41767
312 bp
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UTR
Exon/CDS
Intron
Rmu_sc0012870.1_g000006.1.cds

Sequence Viewer

Length: 312 bp
atgaaggatacaagtgaggcgaattctaagataatggtatctaacaatactgcaatgtcttgtaggcttgaaattagacaagctggagaagggagacatcatgttccaggacttgttgaggaacatgtgaaaaacatgaatgaagtctgggaagttctccaaactgatagtaatgcaagggctgttggctcaaccaatgccaatgagcatagcagctgtgactttggattcagatatttttaccaagaattttgtatcccaatgcaagtgatgcatcttagaatggtggttctgcacattagacctgaatag

Protein Analysis

103

Amino Acids

11.82

Weight (kDa)

6.04

Isoelectric Point (pI)

50.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 22, 248
AflIII ACRYGT 1 cut(s) 124
AgsI TTSAA 1 cut(s) 71
AjnI CCWGG 1 cut(s) 106
AluBI AGCT 2 cut(s) 83, 216
AluI AGCT 2 cut(s) 83, 216
Alw26I GTCTC 1 cut(s) 88
ApeKI GCWGC 1 cut(s) 213
ApoI RAATTY 2 cut(s) 22, 248
BbvI GCAGC 1 cut(s) 225
BciT130I CCWGG 1 cut(s) 108
BciVI GTATCC 1 cut(s) 266
BcoDI GTCTC 1 cut(s) 88
BfuI GTATCC 1 cut(s) 266
BisI GCNGC 1 cut(s) 214
BlsI GCNGC 1 cut(s) 215
Bme1390I CCNGG 1 cut(s) 108
BmrFI CCNGG 1 cut(s) 108
BmsI GCATC 2 cut(s) 261, 283
BpmI CTGGAG 1 cut(s) 105
Bse3DI GCAATG 1 cut(s) 60
BseBI CCWGG 1 cut(s) 108
BseMI GCAATG 1 cut(s) 60
BseXI GCAGC 1 cut(s) 225
BsgI GTGCAG 1 cut(s) 278
BsmAI GTCTC 1 cut(s) 88
BsrDI GCAATG 1 cut(s) 60
Bst2UI CCWGG 1 cut(s) 108
BstAPI GCANNNNNTGC 1 cut(s) 271
BstDEI CTNAG 2 cut(s) 27, 278
BstMAI GTCTC 1 cut(s) 88
BstMWI GCNNNNNNNGC 1 cut(s) 271
BstNI CCWGG 1 cut(s) 108
BstNSI RCATGY 1 cut(s) 128
BstSCI CCNGG 1 cut(s) 106
BstV1I GCAGC 1 cut(s) 225
BsuI GTATCC 1 cut(s) 266
CviAII CATG 3 cut(s) 101, 125, 136
CviJI RGCY 5 cut(s) 67, 83, 182, 189, 216
CviKI_1 RGCY 5 cut(s) 67, 83, 182, 189, 216
DdeI CTNAG 2 cut(s) 27, 278
EcoRI GAATTC 1 cut(s) 22
EcoRII CCWGG 1 cut(s) 106
EcoT22I ATGCAT 1 cut(s) 276
FaeI CATG 3 cut(s) 104, 128, 139
FaiI YATR 4 cut(s) 102, 126, 137, 210
FatI CATG 3 cut(s) 100, 124, 135
Fnu4HI GCNGC 1 cut(s) 214
Fsp4HI GCNGC 1 cut(s) 214
GluI GCNGC 1 cut(s) 214
GsuI CTGGAG 1 cut(s) 105
Hin1II CATG 3 cut(s) 104, 128, 139
HinfI GANTC 1 cut(s) 228
Hpy188I TCNGA 1 cut(s) 233
HpyAV CCTTC 1 cut(s) 83
HpyCH4V TGCA 5 cut(s) 53, 176, 265, 274, 295
HpyF10VI GCNNNNNNNGC 1 cut(s) 271
HpyF3I CTNAG 2 cut(s) 27, 278
Hsp92II CATG 3 cut(s) 104, 128, 139
LpnPI CCDG 4 cut(s) 69, 93, 120, 133
Lsp1109I GCAGC 1 cut(s) 225
LweI GCATC 2 cut(s) 261, 283
MaeIII GTNAC 1 cut(s) 218
MluCI AATT 3 cut(s) 22, 72, 248
MnlI CCTC 2 cut(s) 10, 112
Mph1103I ATGCAT 1 cut(s) 276
MspA1I CMGCKG 1 cut(s) 216
MspR9I CCNGG 1 cut(s) 108
MvaI CCWGG 1 cut(s) 108
MwoI GCNNNNNNNGC 1 cut(s) 271
NlaIII CATG 3 cut(s) 104, 128, 139
NmuCI GTSAC 1 cut(s) 218
NsiI ATGCAT 1 cut(s) 276
NspI RCATGY 1 cut(s) 128
PciI ACATGT 1 cut(s) 124
PfeI GAWTC 1 cut(s) 228
PfoI TCCNGGA 1 cut(s) 106
PkrI GCNGC 1 cut(s) 215
PscI ACATGT 1 cut(s) 124
Psp6I CCWGG 1 cut(s) 106
PspGI CCWGG 1 cut(s) 106
PvuII CAGCTG 1 cut(s) 216
SatI GCNGC 1 cut(s) 214
ScrFI CCNGG 1 cut(s) 108
SetI ASST 3 cut(s) 85, 218, 307
SfaNI GCATC 2 cut(s) 261, 283
Sse9I AATT 3 cut(s) 22, 72, 248
StyD4I CCNGG 1 cut(s) 106
TasI AATT 3 cut(s) 22, 72, 248
TfiI GAWTC 1 cut(s) 228
TseFI GTSAC 1 cut(s) 218
TseI GCWGC 1 cut(s) 213
Tsp45I GTSAC 1 cut(s) 218
TspDTI ATGAA 3 cut(s) 17, 152, 156
XapI RAATTY 2 cut(s) 22, 248
XceI RCATGY 1 cut(s) 128
Zsp2I ATGCAT 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.