FvH4_2g01590

Armadillo/beta-catenin-like repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0015849
Physical Location & Seq
Reverse (-)
1451351 .. 1453273
1923 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g01590.t1

Sequence Viewer

Length: 1923 bp
ATGGCGGCAATTGTGAAGGAGATTCTGGCCCGGCCGATTCAGCTGGCCGATCACGTCACCAAAGCCGCCGACGAGGCACAGTCTTTCCGTCAAGACTGCATGGAGCTCAAAGCCAAAACCGAGAAGCTCGCCGCCCTCCTCCGCCAGGCCGCGCGTGCCAGCAACGAGCTCTACGAGCGTCCCACACGTCGCATCATCGACGACACCGAGCAAGTCCTCGACAAGGCCCTCGGTCTCGTCATCAAGTGCCGAGCCAACGGCATCATGAAGCGAGTCTTCACCATCATCCCCGCCACGGCCTTCCGCAAAACCGCGCAGCAGCTCGAGAACTCCATCGGCGACGTGTCGTGGCTCCTCCGCGTCTCCGCCCCCTCCGACGACCGTGACGACGAGTACCTCGGCTTGCCTCCGATCGCAGCCAACGAGCCGATCCTCTGCCTCATTTGGGAGCAGATAGCTAATCTCCACACCGGCACGTTGGAAGAGCGATCGGATGCGGCAGCGTCTCTGGTCTCATTGGCCAGAGACAATGAGAGATACGGAAAGCTCATAATAGAAGAAGGTGGGGTGCCACCGCTGCTCAAGGTTGCCAAGGAAGGAGGACACAAAGAGGGTCAAGAAAATGCCGCTCGTGCTATAGGGTTACTAGGCCGGGATCCCGAGAGTGTGGAGCAGATTGTTAACTCTGGGGTTTGCCCGGTGTTTGCGAAAATACTTAAAGATGGTCACATGAAGATTCAAGCAGTTGTGGCCTGGGCGGTGTCGGAGCTAGCCGAGCACCACCCCAAATGCCAGGATCCGTTTGCACAGAACAATGTGATCAGAATGCTTGTCAGTCATCTCGCGTTTGAGACTATTCCGGAACATAGCAAGTATGCAATCGCTAGTAAGCAGAACATTTCGTTACATTCTGTTGTCATGGCGAATAATAGTAACAGGCCCGATACGATCGAGCATAGTTCCTCTGGTCATGTTGCGCATCCGTTGTCAGGGAATCAACATCAGACGATGCAGAATGTGGTGCAGACTGCGGCGAAGAATAAGCAGGCACATAATGCTGCAGGCGGAGCAGGTCACAATCATCACCATCATCCTAATACGCACGGGAATGCAAAGTCAAACCACCAGCTGTCTGGGGCTAGCCTTAAGGGGAGGGAGTACGAAGACCCGGCTACTAAGGCCGAGATGAAGGCAATGGCCGCAAGGGCGCTTTGGAAGCTTGCTAAGGGGAATGTCACTGTGTGTCATAGCATCACAGAGTCAAGGGCGCTTTTGTGCTTTGCGGTTTTGATAGAAAAGGGTCCTGATGATGTTAAGATGTATTCGGCTTATGCGTTGATGGAAATCACAGCGGTAGCAGAGCAGAATTCAGACTTGAGGCGCAATGCCTTCAAGCCTACTTCCCCGGCTGCCAAGGCTGTGCTGGAACAATTGTTGAGGATCATAGAGAAGGCGGATGATGAGCTTCTTATACCGTCTGTACAGTCGATTGGAAACTTGGCAAGGACTTTTCGAGCAACAGAAACAAGGCTAATCGGGCCATTGGTGAAGCTGCTCGATGAAAGAGAACCTGAGGTTTCTGTTGAGGCTGTGATTGCACTCAACAAGTTTGCATGCACTGAAAATTTTCTCCATGTCTATCACTGTAAAGCGATTATAGATGCAGGAGGAGCCAAGCATCTAATTCAGCTGGTTTACTTTGGAGAACAAATGGTGCAGATTCCTTCACTAGTTCTTTTATGTTACATTGCATTGCATATTCCAGATAGTGAGACACTTGCTCAGGAAGAAGTGCTTATCGTGCTGGAATGGTCAACAAAGCAGGCACATCTTGCTAATGAACCATCAATTGAACCATTGTTACCAGAGGCCAAAAGTAGGCTGGAGCTTTACCAATCCAGAGGTTCAAGAGGATTTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm

Protein Analysis

641

Amino Acids

70.34

Weight (kDa)

6.46

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7792 PF25055 6 - 122 9e-53 Domain of unknown function (DUF7792)
ARM_ARMC5 PF24768 184 - 349 3e-06 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015849)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34940
fragaria_vesca FvH4_2g01590
malus_domestica MD05G1118400.v1.1 MD10G1121400.v1.1
prunus_persica Prupe.8G162900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0244271
rosa_laevigata RLG00000015369
rosa_multiflora Rmu_sc0006898.1_g000016
rosa_roxburghii Rroxscaffold_7G00215890
rosa_rugosa Rorug05G0507900
rosa_samantha Rh6AG022900 Rh6BG018700 Rh6CG015900 Rh6DG017100
rosa_wichuraiana Rw6G001900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 978
Acc36I ACCTGC 1 cut(s) 1061
AccB1I GGYRCC 1 cut(s) 568
AccBSI CCGCTC 1 cut(s) 629
AccII CGCG 5 cut(s) 152, 154, 314, 360, 845
AccIII TCCGGA 1 cut(s) 859
AclWI GGATC 6 cut(s) 424, 650, 663, 791, 804, 1448
AcoI YGGCCR 4 cut(s) 32, 45, 519, 1197
AcsI RAATTY 2 cut(s) 1366, 1624
AdeI CACNNNGTG 1 cut(s) 1242
AfaI GTAC 3 cut(s) 395, 1160, 1482
AfiI CCNNNNNNNGG 6 cut(s) 145, 223, 295, 445, 989, 1878
AflII CTTAAG 1 cut(s) 1145
AflIII ACRYGT 2 cut(s) 185, 342
AgsI TTSAA 4 cut(s) 740, 1393, 1853, 1908
AhlI ACTAGT 1 cut(s) 1729
AjiI CACGTC 3 cut(s) 55, 188, 343
AjnI CCWGG 3 cut(s) 144, 752, 792
Alw21I GWGCWC 3 cut(s) 108, 171, 780
Alw26I GTCTC 7 cut(s) 239, 367, 510, 517, 519, 845, 1766
AlwI GGATC 6 cut(s) 424, 650, 663, 791, 804, 1448
Ama87I CYCGRG 2 cut(s) 323, 659
Aor13HI TCCGGA 1 cut(s) 859
ApeKI GCWGC 8 cut(s) 316, 319, 416, 500, 577, 1058, 1409, 1552
ApoI RAATTY 2 cut(s) 1366, 1624
Asp700I GAANNNNTTC 1 cut(s) 1626
AspLEI GCGC 6 cut(s) 154, 316, 979, 1210, 1270, 1383
AspS9I GGNCC 5 cut(s) 28, 226, 939, 1301, 1538
AsuC2I CCSGG 5 cut(s) 31, 653, 698, 1169, 1406
AsuHPI GGTGA 4 cut(s) 49, 271, 1076, 1558
AsuNHI GCTAGC 2 cut(s) 769, 1139
AvaI CYCGRG 2 cut(s) 323, 659
AvaII GGWCC 1 cut(s) 1301
AxyI CCTNAGG 1 cut(s) 1572
BalI TGGCCA 1 cut(s) 521
BamHI GGATCC 2 cut(s) 655, 796
BanI GGYRCC 1 cut(s) 568
BanII GRGCYC 2 cut(s) 108, 171
BauI CACGAG 1 cut(s) 630
BbsI GAAGAC 2 cut(s) 268, 1170
Bbv12I GWGCWC 3 cut(s) 108, 171, 780
BbvI GCAGC 8 cut(s) 328, 331, 428, 512, 564, 1045, 1396, 1539
BccI CCATC 6 cut(s) 290, 341, 716, 1095, 1333, 1852
BceAI ACGGC 2 cut(s) 274, 312
BciT130I CCWGG 3 cut(s) 146, 754, 794
BclI TGATCA 1 cut(s) 819
BcnI CCSGG 5 cut(s) 31, 653, 698, 1169, 1406
BcoDI GTCTC 7 cut(s) 239, 367, 510, 517, 519, 845, 1766
BcuI ACTAGT 1 cut(s) 1729
BfaI CTAG 5 cut(s) 647, 770, 885, 1140, 1730
BfmI CTRYAG 2 cut(s) 636, 1059
BfoI RGCGCY 2 cut(s) 1211, 1271
BfrI CTTAAG 1 cut(s) 1145
BfuAI ACCTGC 1 cut(s) 1061
BglI GCCNNNNNGGC 2 cut(s) 74, 1205
Bme1390I CCNGG 8 cut(s) 31, 146, 653, 698, 754, 794, 1169, 1406
Bme18I GGWCC 1 cut(s) 1301
BmeT110I CYCGRG 2 cut(s) 323, 659
BmgBI CACGTC 3 cut(s) 55, 188, 343
BmgT120I GGNCC 5 cut(s) 28, 226, 939, 1301, 1538
BmiI GGNNCC 6 cut(s) 353, 570, 657, 798, 1302, 1672
BmrFI CCNGG 8 cut(s) 31, 146, 653, 698, 754, 794, 1169, 1406
BmsI GCATC 8 cut(s) 201, 270, 484, 988, 999, 1260, 1651, 1687
BmtI GCTAGC 2 cut(s) 773, 1143
BpiI GAAGAC 2 cut(s) 268, 1170
BpmI CTGGAG 1 cut(s) 1904
Bpu10I CCTNAGC 2 cut(s) 1224, 1782
BpuEI CTTGAG 2 cut(s) 566, 1396
BpuMI CCSGG 5 cut(s) 31, 653, 698, 1169, 1406
BsaBI GATNNNNATC 1 cut(s) 1343
BsaI GGTCTC 2 cut(s) 239, 517
BsaJI CCNNGG 7 cut(s) 229, 294, 397, 591, 753, 1404, 1413
BsaWI WCCGGW 1 cut(s) 859
Bsc4I CCNNNNNNNGG 6 cut(s) 145, 223, 295, 445, 989, 1878
Bse118I RCCGGY 1 cut(s) 470
Bse21I CCTNAGG 1 cut(s) 1572
Bse3DI GCAATG 4 cut(s) 1200, 1390, 1746, 1751
Bse8I GATNNNNATC 1 cut(s) 1343
BseAI TCCGGA 1 cut(s) 859
BseBI CCWGG 3 cut(s) 146, 754, 794
BseDI CCNNGG 7 cut(s) 229, 294, 397, 591, 753, 1404, 1413
BseGI GGATG 5 cut(s) 285, 499, 979, 1090, 1462
BseJI GATNNNNATC 1 cut(s) 1343
BseLI CCNNNNNNNGG 6 cut(s) 145, 223, 295, 445, 989, 1878
BseMI GCAATG 4 cut(s) 1200, 1390, 1746, 1751
BseMII CTCAG 2 cut(s) 1563, 1796
BseRI GAGGAG 3 cut(s) 128, 344, 1683
BseX3I CGGCCG 1 cut(s) 32
BseXI GCAGC 8 cut(s) 328, 331, 428, 512, 564, 1045, 1396, 1539
BsgI GTGCAG 2 cut(s) 1043, 1736
Bsh1236I CGCG 5 cut(s) 152, 154, 314, 360, 845
Bsh1285I CGRYCG 5 cut(s) 35, 382, 414, 491, 951
BshNI GGYRCC 1 cut(s) 568
BsiEI CGRYCG 5 cut(s) 35, 382, 414, 491, 951
BsiHKAI GWGCWC 3 cut(s) 108, 171, 780
BsiHKCI CYCGRG 2 cut(s) 323, 659
BsiSI CCGG 7 cut(s) 31, 471, 652, 698, 860, 1169, 1406
BslFI GGGAC 1 cut(s) 165
BslI CCNNNNNNNGG 6 cut(s) 145, 223, 295, 445, 989, 1878
BsmAI GTCTC 7 cut(s) 239, 367, 510, 517, 519, 845, 1766
BsmBI CGTCTC 2 cut(s) 367, 510
BsmFI GGGAC 1 cut(s) 165
BsmI GAATGC 2 cut(s) 831, 1114
Bso31I GGTCTC 2 cut(s) 239, 517
BsoBI CYCGRG 2 cut(s) 323, 659
Bsp1286I GDGCHC 3 cut(s) 108, 171, 780
Bsp13I TCCGGA 1 cut(s) 859
Bsp1407I TGTACA 1 cut(s) 1480
Bsp143I GATC 9 cut(s) 49, 411, 429, 488, 655, 796, 819, 948, 1440
BspCNI CTCAG 2 cut(s) 1564, 1795
BspEI TCCGGA 1 cut(s) 859
BspFNI CGCG 5 cut(s) 152, 154, 314, 360, 845
BspHI TCATGA 1 cut(s) 264
BspLI GGNNCC 6 cut(s) 353, 570, 657, 798, 1302, 1672
BspMAI CTGCAG 1 cut(s) 1063
BspMI ACCTGC 1 cut(s) 1061
BspOI GCTAGC 2 cut(s) 773, 1143
BspPI GGATC 6 cut(s) 424, 650, 663, 791, 804, 1448
BspQI GCTCTTC 1 cut(s) 477
BspT107I GGYRCC 1 cut(s) 568
BspTI CTTAAG 1 cut(s) 1145
BspTNI GGTCTC 2 cut(s) 239, 517
BsrBI CCGCTC 1 cut(s) 629
BsrDI GCAATG 4 cut(s) 1200, 1390, 1746, 1751
BsrFI RCCGGY 1 cut(s) 470
BsrGI TGTACA 1 cut(s) 1480
BssAI RCCGGY 1 cut(s) 470
BssECI CCNNGG 7 cut(s) 229, 294, 397, 591, 753, 1404, 1413
BssMI GATC 9 cut(s) 49, 411, 429, 488, 655, 796, 819, 948, 1440
BssSI CACGAG 1 cut(s) 630
BssT1I CCWWGG 2 cut(s) 591, 1413
Bst2BI CACGAG 1 cut(s) 630
Bst2UI CCWGG 3 cut(s) 146, 754, 794
Bst4CI ACNGT 6 cut(s) 81, 383, 1240, 1476, 1485, 1646
Bst6I CTCTTC 1 cut(s) 477
BstAFI CTTAAG 1 cut(s) 1145
BstAPI GCANNNNNTGC 2 cut(s) 1055, 1832
BstAUI TGTACA 1 cut(s) 1480
BstDEI CTNAG 4 cut(s) 1176, 1224, 1572, 1782
BstDSI CCRYGG 1 cut(s) 294
BstENI CCTNNNNNAGG 2 cut(s) 143, 221
BstF5I GGATG 5 cut(s) 285, 499, 979, 1090, 1462
BstFNI CGCG 5 cut(s) 152, 154, 314, 360, 845
BstH2I RGCGCY 2 cut(s) 1211, 1271
BstHHI GCGC 6 cut(s) 154, 316, 979, 1210, 1270, 1383
BstKTI GATC 9 cut(s) 52, 414, 432, 491, 658, 799, 822, 951, 1443
BstMAI GTCTC 7 cut(s) 239, 367, 510, 517, 519, 845, 1766
BstMBI GATC 9 cut(s) 49, 411, 429, 488, 655, 796, 819, 948, 1440
BstMCI CGRYCG 5 cut(s) 35, 382, 414, 491, 951
BstNI CCWGG 3 cut(s) 146, 754, 794
BstNSI RCATGY 1 cut(s) 1617
BstSCI CCNGG 8 cut(s) 29, 144, 651, 696, 752, 792, 1167, 1404
BstSFI CTRYAG 2 cut(s) 636, 1059
BstUI CGCG 5 cut(s) 152, 154, 314, 360, 845
BstV1I GCAGC 8 cut(s) 328, 331, 428, 512, 564, 1045, 1396, 1539
BstV2I GAAGAC 2 cut(s) 268, 1170
BstX2I RGATCY 2 cut(s) 655, 796
BstXI CCANNNNNNTGG 1 cut(s) 1133
BstYI RGATCY 2 cut(s) 655, 796
BstZI CGGCCG 1 cut(s) 32
Bsu36I CCTNAGG 1 cut(s) 1572
BtgI CCRYGG 1 cut(s) 294
BtrI CACGTC 3 cut(s) 55, 188, 343
BtsCI GGATG 5 cut(s) 285, 499, 979, 1090, 1462
BtsIMutI CAGTG 3 cut(s) 1236, 1617, 1642
BveI ACCTGC 1 cut(s) 1061
CciI TCATGA 1 cut(s) 264
CfoI GCGC 6 cut(s) 154, 316, 979, 1210, 1270, 1383
Cfr10I RCCGGY 1 cut(s) 470
Cfr13I GGNCC 5 cut(s) 28, 226, 939, 1301, 1538
CseI GACGC 3 cut(s) 167, 349, 492
Csp6I GTAC 3 cut(s) 394, 1159, 1481
CviAII CATG 7 cut(s) 100, 265, 730, 919, 971, 1614, 1634
CviQI GTAC 3 cut(s) 394, 1159, 1481
DdeI CTNAG 4 cut(s) 1176, 1224, 1572, 1782
DpnI GATC 9 cut(s) 51, 413, 431, 490, 657, 798, 821, 950, 1442
DpnII GATC 9 cut(s) 49, 411, 429, 488, 655, 796, 819, 948, 1440
DraIII CACNNNGTG 1 cut(s) 1242
EaeI YGGCCR 4 cut(s) 32, 45, 519, 1197
EagI CGGCCG 1 cut(s) 32
Eam1104I CTCTTC 1 cut(s) 477
EarI CTCTTC 1 cut(s) 477
EciI GGCGGA 4 cut(s) 131, 355, 1080, 1469
Ecl136II GAGCTC 2 cut(s) 106, 169
EclXI CGGCCG 1 cut(s) 32
Eco130I CCWWGG 2 cut(s) 591, 1413
Eco24I GRGCYC 2 cut(s) 108, 171
Eco31I GGTCTC 2 cut(s) 239, 517
Eco47I GGWCC 1 cut(s) 1301
Eco52I CGGCCG 1 cut(s) 32
Eco53kI GAGCTC 2 cut(s) 106, 169
Eco81I CCTNAGG 1 cut(s) 1572
Eco88I CYCGRG 2 cut(s) 323, 659
EcoICRI GAGCTC 2 cut(s) 106, 169
EcoNI CCTNNNNNAGG 2 cut(s) 143, 221
EcoO109I RGGNCCY 2 cut(s) 226, 1301
EcoRI GAATTC 1 cut(s) 1366
EcoRII CCWGG 3 cut(s) 144, 752, 792
EcoT14I CCWWGG 2 cut(s) 591, 1413
EcoT38I GRGCYC 2 cut(s) 108, 171
ErhI CCWWGG 2 cut(s) 591, 1413
Esp3I CGTCTC 2 cut(s) 367, 510
FaeI CATG 7 cut(s) 103, 268, 733, 922, 974, 1617, 1637
FalI AAGNNNNNCTT 4 cut(s) 260, 292, 1779, 1811
FaqI GGGAC 1 cut(s) 165
FatI CATG 7 cut(s) 99, 264, 729, 918, 970, 1613, 1633
FauI CCCGC 1 cut(s) 298
FbaI TGATCA 1 cut(s) 819
FokI GGATG 5 cut(s) 272, 506, 966, 1077, 1469
FriOI GRGCYC 2 cut(s) 108, 171
FspBI CTAG 5 cut(s) 647, 770, 885, 1140, 1730
FspI TGCGCA 1 cut(s) 978
GlaI GCGC 6 cut(s) 153, 315, 978, 1209, 1269, 1382
GsuI CTGGAG 1 cut(s) 1904
HaeII RGCGCY 2 cut(s) 1211, 1271
HapII CCGG 7 cut(s) 31, 471, 652, 698, 860, 1169, 1406
HgaI GACGC 3 cut(s) 167, 349, 492
HhaI GCGC 6 cut(s) 154, 316, 979, 1210, 1270, 1383
Hin1II CATG 7 cut(s) 103, 268, 733, 922, 974, 1617, 1637
Hin6I GCGC 6 cut(s) 152, 314, 977, 1208, 1268, 1381
HinP1I GCGC 6 cut(s) 152, 314, 977, 1208, 1268, 1381
HincII GTYRAC 2 cut(s) 682, 1815
HindII GTYRAC 2 cut(s) 682, 1815
HindIII AAGCTT 1 cut(s) 1217
HinfI GANTC 7 cut(s) 22, 37, 273, 736, 994, 1259, 1720
HpaI GTTAAC 1 cut(s) 682
HpaII CCGG 7 cut(s) 31, 471, 652, 698, 860, 1169, 1406
HphI GGTGA 4 cut(s) 49, 271, 1076, 1558
Hpy166II GTNNAC 3 cut(s) 682, 1696, 1815
Hpy188I TCNGA 7 cut(s) 376, 411, 493, 766, 824, 1005, 1372
Hpy8I GTNNAC 3 cut(s) 682, 1696, 1815
Hpy99I CGWCG 6 cut(s) 74, 192, 203, 344, 380, 392
HpyAV CCTTC 8 cut(s) 10, 310, 554, 590, 1183, 1399, 1444, 1734
HpyCH4III ACNGT 6 cut(s) 81, 383, 1240, 1476, 1485, 1646
HpyCH4IV ACGT 4 cut(s) 54, 187, 342, 476
HpyF3I CTNAG 4 cut(s) 1176, 1224, 1572, 1782
HpySE526I ACGT 4 cut(s) 54, 187, 342, 476
Hsp92II CATG 7 cut(s) 103, 268, 733, 922, 974, 1617, 1637
HspAI GCGC 6 cut(s) 152, 314, 977, 1208, 1268, 1381
Kpn2I TCCGGA 1 cut(s) 859
Ksp22I TGATCA 1 cut(s) 819
KspAI GTTAAC 1 cut(s) 682
Kzo9I GATC 9 cut(s) 49, 411, 429, 488, 655, 796, 819, 948, 1440
LguI GCTCTTC 1 cut(s) 477
LmnI GCTCC 8 cut(s) 103, 357, 448, 670, 766, 1067, 1670, 1885
Lsp1109I GCAGC 8 cut(s) 328, 331, 428, 512, 564, 1045, 1396, 1539
LweI GCATC 8 cut(s) 201, 270, 484, 988, 999, 1260, 1651, 1687
MaeI CTAG 5 cut(s) 647, 770, 885, 1140, 1730
MaeII ACGT 4 cut(s) 54, 187, 342, 476
MalI GATC 9 cut(s) 51, 413, 431, 490, 657, 798, 821, 950, 1442
MbiI CCGCTC 1 cut(s) 629
MboI GATC 9 cut(s) 49, 411, 429, 488, 655, 796, 819, 948, 1440
MboII GAAGA 7 cut(s) 268, 494, 569, 745, 1048, 1175, 1799
MfeI CAATTG 3 cut(s) 9, 1430, 1848
MflI RGATCY 2 cut(s) 655, 796
MhlI GDGCHC 3 cut(s) 108, 171, 780
MlsI TGGCCA 1 cut(s) 521
MluCI AATT 6 cut(s) 9, 1366, 1430, 1624, 1683, 1848
MluNI TGGCCA 1 cut(s) 521
MlyI GAGTC 2 cut(s) 282, 1268
MmeI TCCRAC 3 cut(s) 399, 459, 744
Mox20I TGGCCA 1 cut(s) 521
MroI TCCGGA 1 cut(s) 859
MroXI GAANNNNTTC 1 cut(s) 1626
MscI TGGCCA 1 cut(s) 521
MseI TTAA 4 cut(s) 681, 717, 1146, 1314
MslI CAYNNNNRTG 1 cut(s) 1107
Msp20I TGGCCA 1 cut(s) 521
MspA1I CMGCKG 5 cut(s) 43, 577, 1129, 1352, 1690
MspCI CTTAAG 1 cut(s) 1145
MspI CCGG 7 cut(s) 31, 471, 652, 698, 860, 1169, 1406
MspR9I CCNGG 8 cut(s) 31, 146, 653, 698, 754, 794, 1169, 1406
MunI CAATTG 3 cut(s) 9, 1430, 1848
Mva1269I GAATGC 2 cut(s) 831, 1114
MvaI CCWGG 3 cut(s) 146, 754, 794
MvnI CGCG 5 cut(s) 152, 154, 314, 360, 845
NciI CCSGG 5 cut(s) 31, 653, 698, 1169, 1406
NdeII GATC 9 cut(s) 49, 411, 429, 488, 655, 796, 819, 948, 1440
NheI GCTAGC 2 cut(s) 769, 1139
NlaIII CATG 7 cut(s) 103, 268, 733, 922, 974, 1617, 1637
NlaIV GGNNCC 6 cut(s) 353, 570, 657, 798, 1302, 1672
NmeAIII GCCGAG 4 cut(s) 275, 378, 799, 1207
NmuCI GTSAC 5 cut(s) 55, 383, 725, 1073, 1234
NsbI TGCGCA 1 cut(s) 978
NspI RCATGY 1 cut(s) 1617
PaeI GCATGC 1 cut(s) 1617
PaeR7I CTCGAG 1 cut(s) 323
PagI TCATGA 1 cut(s) 264
PciSI GCTCTTC 1 cut(s) 477
PcsI WCGNNNNNNNCGW 5 cut(s) 171, 204, 384, 420, 1331
PctI GAATGC 2 cut(s) 831, 1114
PdmI GAANNNNTTC 1 cut(s) 1626
PfeI GAWTC 5 cut(s) 22, 37, 736, 994, 1720
Ple19I CGATCG 3 cut(s) 414, 491, 951
PleI GAGTC 2 cut(s) 281, 1267
PpsI GAGTC 2 cut(s) 281, 1267
PpuMI RGGWCCY 1 cut(s) 1301
Psp124BI GAGCTC 2 cut(s) 108, 171
Psp5II RGGWCCY 1 cut(s) 1301
Psp6I CCWGG 3 cut(s) 144, 752, 792
PspGI CCWGG 3 cut(s) 144, 752, 792
PspN4I GGNNCC 6 cut(s) 353, 570, 657, 798, 1302, 1672
PspPI GGNCC 5 cut(s) 28, 226, 939, 1301, 1538
PspPPI RGGWCCY 1 cut(s) 1301
PsrI GAACNNNNNNTAC 2 cut(s) 1845, 1877
PstI CTGCAG 1 cut(s) 1063
PsuI RGATCY 2 cut(s) 655, 796
PvuI CGATCG 3 cut(s) 414, 491, 951
PvuII CAGCTG 3 cut(s) 43, 1129, 1690
RsaI GTAC 3 cut(s) 395, 1160, 1482
RsaNI GTAC 3 cut(s) 394, 1159, 1481
RseI CAYNNNNRTG 1 cut(s) 1107
SacI GAGCTC 2 cut(s) 108, 171
SapI GCTCTTC 1 cut(s) 477
SaqAI TTAA 4 cut(s) 681, 717, 1146, 1314
Sau3AI GATC 9 cut(s) 49, 411, 429, 488, 655, 796, 819, 948, 1440
Sau96I GGNCC 5 cut(s) 28, 226, 939, 1301, 1538
SchI GAGTC 2 cut(s) 282, 1268
ScrFI CCNGG 8 cut(s) 31, 146, 653, 698, 754, 794, 1169, 1406
SduI GDGCHC 3 cut(s) 108, 171, 780
SfaNI GCATC 8 cut(s) 201, 270, 484, 988, 999, 1260, 1651, 1687
SfcI CTRYAG 2 cut(s) 636, 1059
Sfr274I CTCGAG 1 cut(s) 323
SinI GGWCC 1 cut(s) 1301
SlaI CTCGAG 1 cut(s) 323
SmiMI CAYNNNNRTG 1 cut(s) 1107
SmlI CTYRAG 4 cut(s) 323, 581, 1145, 1375
SmoI CTYRAG 4 cut(s) 323, 581, 1145, 1375
SpeI ACTAGT 1 cut(s) 1729
SphI GCATGC 1 cut(s) 1617
Sse9I AATT 6 cut(s) 9, 1366, 1430, 1624, 1683, 1848
SspMI CTAG 5 cut(s) 647, 770, 885, 1140, 1730
SstI GAGCTC 2 cut(s) 108, 171
StyD4I CCNGG 8 cut(s) 29, 144, 651, 696, 752, 792, 1167, 1404
StyI CCWWGG 2 cut(s) 591, 1413
TaaI ACNGT 6 cut(s) 81, 383, 1240, 1476, 1485, 1646
TaiI ACGT 4 cut(s) 57, 190, 345, 479
TaqI TCGA 7 cut(s) 198, 219, 324, 951, 1487, 1513, 1557
TaqII GACCGA 1 cut(s) 221
TasI AATT 6 cut(s) 9, 1366, 1430, 1624, 1683, 1848
TatI WGTACW 1 cut(s) 1480
TauI GCSGC 8 cut(s) 8, 68, 134, 152, 500, 629, 1034, 1202
TfiI GAWTC 5 cut(s) 22, 37, 736, 994, 1720
Tru1I TTAA 4 cut(s) 681, 717, 1146, 1314
Tru9I TTAA 4 cut(s) 681, 717, 1146, 1314
TscAI CASTG 3 cut(s) 1243, 1624, 1649
TseFI GTSAC 5 cut(s) 55, 383, 725, 1073, 1234
TseI GCWGC 8 cut(s) 316, 319, 416, 500, 577, 1058, 1409, 1552
Tsp45I GTSAC 5 cut(s) 55, 383, 725, 1073, 1234
TspDTI ATGAA 5 cut(s) 281, 746, 1202, 1575, 1854
TspGWI ACGGA 4 cut(s) 77, 555, 789, 972
TspRI CASTG 3 cut(s) 1243, 1624, 1649
Vha464I CTTAAG 1 cut(s) 1145
VpaK11BI GGWCC 1 cut(s) 1301
XagI CCTNNNNNAGG 2 cut(s) 143, 221
XapI RAATTY 2 cut(s) 1366, 1624
XceI RCATGY 1 cut(s) 1617
XcmI CCANNNNNNNNNTGG 3 cut(s) 1130, 1420, 1879
XhoI CTCGAG 1 cut(s) 323
XmnI GAANNNNTTC 1 cut(s) 1626
XspI CTAG 5 cut(s) 647, 770, 885, 1140, 1730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.