Rh6CG015900

Armadillo/beta-catenin-like repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0015849
Physical Location & Seq
Reverse (-)
1679965 .. 1682720
2756 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG015900.1

Sequence Viewer

Length: 1947 bp
ATGGCGGCAATTGTGAAGGAGATCCTGGCCCGGCCGATCCAGCTGGCCGACCAAGTCACCAAAGCCGCCGACGAGGCACAGTCTTTCCGACAAGACTGCATGGAGCTCAAATCCAAAACGGAGAAGCTCGCCGGCCTCCTCCGCCAGGCCGCGCGTGCGAGCAACGACCTCTACGAGCGTCCGACACGTCGCATCATCGACGAAACCGAGCAAGTCCTCGAGAAGGCCCTCGCCCTCGTCATCAAGTGCCGCGCCAACGGCATCATGAAGCGAGTATTCACCATCATTCCCGCCACGGCGTTCCGAAAGACGTCGCAGCAGCTCGAGAATTCCATCGGCGACGTGTCGTGGCTGCTCCGCGTCTCGGCCCCCTCCGACGACCGAGACGACGAGTACCTCGGCCTGCCGCCGATCGCCTCCAACGAGCCGATCCTCTGCCTCATTTGGGAGCAGATAGCTATTCTCTACACCGGCTCGTTGGAGGAGCGATCGGATGCGACAGCCTCACTGGTCTCATTGGCCAGAGACAATGACAGATACGGAAAGCTCATCATTGAGGAAGGTGGGGTCCCACCGCTGTTGAAGGTAGCTAAGGAAGGGGGAAACAAGGAGGGCCAAGAAAATGCAGCTCGTGCGATCGGGTTACTAGGCCGGGACCCTGAGAGCGTGGAGCAGATTGTGCAATCTGGGGTTTGCCCGGTGTTTGCGAAGATACTCAAAGATGGTCACATGAAGATTCAGGCAGTTGTGGCCTGGGCGGTTTCGGAACTAGCCGAGCACCATCCCAAATGCCAGGATCCGTTTGCGCAGAACAATGTGATAAGAATGCTGGTTAGTCATCTCGCGTTTGAAACGATCCAGGAACATAGCAAGTATGCAATCGCTAGTAAGCAGAACATGTCGCTTCATTCGATTGTGATGGGGAATAATAGTAACAGGCCCGATATGGTTGAGCATGGTTCTTCTGGTCATGTTCCGCATCCGATAACAGGGAATCATCAGGCAGCTAATCAGATGCAGAATTTGGTGCAGACTGTGGCAAAGAATAAGCCATCTAATGCTGGAGGGGGAGCAGCTCACAATCATCACCATCATCCTAATGCGCAGGGCAATGCAAAGCCGCACCACCACGGTCAAAACCCAGCTAATGTTTTGTCCGGGAATAGCATTAAGGGGAGGGAGTACGAAGACCCGGTTACCAAGGCTGAGATGAAGGCAATGGCGGCAAGGGCGCTTTGGAAGCTTGCTAAGGGGAATGTTACTGTGTGCCATAGCATCACAGAGTCAAGGGCGCTTTTGTGCTTTGCGGTTTTGATAGAAAAGGGTCATGAGGATGTTAAGAGGTATTCGGCTTATGCGTTGGCGGAAATCACCGCGGTAGCAGAGCAGAATTCAGACTTGAGGCGCAATGCCTTCAAGCCTACTTCCCCTGCTGCCAAGGCTGTGCTGGAACAACTGTTGAGAATCATAGAAAAGGCGGATGATGAGCTTCTTATACCTTGCGTACAGTCTATTGGAAACTTGGCAAGGACTTTTCGAGCAACAGAAACAAGGCTAATCGGGCCATTGGTGAAGCTGCTCGACGAAAGAGAACCAGAGGTTTCTGTTGAGGCTGTGGTTGCACTCATCAAGTTTGCATGCACCGACAATTTTCTCCATGTCAATCACTGTAAAGCGATTACAGATGCAGGAGGAACCAAGCATTTGATTCAGCTGGTTTACTTTGGAGAACAAATGTTGCAGATTCCTTCATTAGTTCTTTTATGTTACATTGCATTGCATATTCCAGATAGTGAGACACTTGCTCAGGAAGAAGTGCTTATTGTGCTGGAATGGTCAACAAAGCAGGCTCATCTTGCTAATGAACCATCAATTGAACCATTATTACCAGAAGCCAAAAGTAGGTTGGAGCTTTACCAATCCAGAGGTTCAAGAGGGTTTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm

Protein Analysis

648

Amino Acids

71.27

Weight (kDa)

6.5

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7792 PF25055 6 - 122 7e-54 Domain of unknown function (DUF7792)
ARM_ARMC5 PF24768 183 - 284 4.1e-06 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015849)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34940
fragaria_vesca FvH4_2g01590
malus_domestica MD05G1118400.v1.1 MD10G1121400.v1.1
prunus_persica Prupe.8G162900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0244271
rosa_laevigata RLG00000015369
rosa_multiflora Rmu_sc0006898.1_g000016
rosa_roxburghii Rroxscaffold_7G00215890
rosa_rugosa Rorug05G0507900
rosa_samantha Rh6AG022900 Rh6BG018700 Rh6CG015900 Rh6DG017100
rosa_wichuraiana Rw6G001900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 314
Acc16I TGCGCA 2 cut(s) 807, 1104
AccII CGCG 6 cut(s) 152, 154, 252, 360, 845, 1376
AclWI GGATC 6 cut(s) 16, 31, 424, 791, 804, 850
AcoI YGGCCR 3 cut(s) 32, 45, 519
AcsI RAATTY 3 cut(s) 328, 1021, 1390
AcyI GRCGYC 1 cut(s) 311
AfaI GTAC 3 cut(s) 395, 1184, 1506
AfiI CCNNNNNNNGG 6 cut(s) 145, 223, 364, 445, 989, 1902
AflIII ACRYGT 3 cut(s) 185, 342, 897
AgsI TTSAA 5 cut(s) 583, 851, 1417, 1877, 1932
AjiI CACGTC 2 cut(s) 188, 343
AjnI CCWGG 5 cut(s) 24, 144, 752, 792, 858
Alw21I GWGCWC 2 cut(s) 108, 780
Alw26I GTCTC 5 cut(s) 367, 378, 517, 519, 1790
AlwI GGATC 6 cut(s) 16, 31, 424, 791, 804, 850
Ama87I CYCGRG 2 cut(s) 218, 323
ApeKI GCWGC 8 cut(s) 316, 319, 352, 626, 1004, 1073, 1433, 1576
ApoI RAATTY 3 cut(s) 328, 1021, 1390
AspLEI GCGC 7 cut(s) 154, 254, 808, 1105, 1234, 1294, 1407
AspS9I GGNCC 8 cut(s) 28, 226, 367, 568, 613, 655, 939, 1562
AsuC2I CCSGG 5 cut(s) 31, 653, 698, 1159, 1193
AsuHPI GGTGA 5 cut(s) 49, 271, 1079, 1363, 1582
AvaI CYCGRG 2 cut(s) 218, 323
AvaII GGWCC 2 cut(s) 568, 655
BalI TGGCCA 1 cut(s) 521
BamHI GGATCC 1 cut(s) 796
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 1 cut(s) 630
BbsI GAAGAC 1 cut(s) 1194
Bbv12I GWGCWC 2 cut(s) 108, 780
BbvI GCAGC 8 cut(s) 328, 331, 339, 638, 1016, 1085, 1420, 1563
BccI CCATC 8 cut(s) 290, 341, 716, 789, 913, 1060, 1098, 1876
BceAI ACGGC 2 cut(s) 274, 312
BcgI CGANNNNNNTGC 2 cut(s) 78, 112
BciT130I CCWGG 5 cut(s) 26, 146, 754, 794, 860
BcnI CCSGG 5 cut(s) 31, 653, 698, 1159, 1193
BcoDI GTCTC 5 cut(s) 367, 378, 517, 519, 1790
BfaI CTAG 3 cut(s) 647, 770, 885
BfoI RGCGCY 2 cut(s) 1235, 1295
BglI GCCNNNNNGGC 1 cut(s) 74
Bme18I GGWCC 2 cut(s) 568, 655
BmeT110I CYCGRG 2 cut(s) 218, 323
BmgBI CACGTC 2 cut(s) 188, 343
BmgT120I GGNCC 8 cut(s) 28, 226, 367, 568, 613, 655, 939, 1562
BmiI GGNNCC 7 cut(s) 369, 569, 570, 656, 657, 798, 1696
BmsI GCATC 7 cut(s) 201, 270, 484, 988, 1005, 1284, 1675
BpiI GAAGAC 1 cut(s) 1194
BpmI CTGGAG 1 cut(s) 1083
Bpu10I CCTNAGC 3 cut(s) 591, 1248, 1806
BpuEI CTTGAG 1 cut(s) 1420
BpuMI CCSGG 5 cut(s) 31, 653, 698, 1159, 1193
BsaHI GRCGYC 1 cut(s) 311
BsaI GGTCTC 1 cut(s) 517
BsaJI CCNNGG 7 cut(s) 294, 397, 753, 1129, 1200, 1374, 1437
Bsc4I CCNNNNNNNGG 6 cut(s) 145, 223, 364, 445, 989, 1902
Bse118I RCCGGY 2 cut(s) 131, 470
Bse1I ACTGG 1 cut(s) 513
Bse3DI GCAATG 5 cut(s) 1117, 1224, 1414, 1770, 1775
BseBI CCWGG 5 cut(s) 26, 146, 754, 794, 860
BseDI CCNNGG 7 cut(s) 294, 397, 753, 1129, 1200, 1374, 1437
BseGI GGATG 6 cut(s) 499, 781, 979, 1093, 1339, 1486
BseLI CCNNNNNNNGG 6 cut(s) 145, 223, 364, 445, 989, 1902
BseMI GCAATG 5 cut(s) 1117, 1224, 1414, 1770, 1775
BseMII CTCAG 3 cut(s) 651, 1197, 1820
BseNI ACTGG 1 cut(s) 513
BseRI GAGGAG 2 cut(s) 128, 497
BseX3I CGGCCG 1 cut(s) 32
BseXI GCAGC 8 cut(s) 328, 331, 339, 638, 1016, 1085, 1420, 1563
BseYI CCCAGC 1 cut(s) 1141
BsgI GTGCAG 1 cut(s) 1049
Bsh1236I CGCG 6 cut(s) 152, 154, 252, 360, 845, 1376
Bsh1285I CGRYCG 5 cut(s) 35, 382, 414, 491, 639
BsiEI CGRYCG 5 cut(s) 35, 382, 414, 491, 639
BsiHKAI GWGCWC 2 cut(s) 108, 780
BsiHKCI CYCGRG 2 cut(s) 218, 323
BsiSI CCGG 7 cut(s) 31, 132, 471, 652, 698, 1158, 1193
BslFI GGGAC 2 cut(s) 554, 668
BslI CCNNNNNNNGG 6 cut(s) 145, 223, 364, 445, 989, 1902
BsmAI GTCTC 5 cut(s) 367, 378, 517, 519, 1790
BsmBI CGTCTC 2 cut(s) 367, 378
BsmFI GGGAC 2 cut(s) 554, 668
BsmI GAATGC 1 cut(s) 831
Bso31I GGTCTC 1 cut(s) 517
BsoBI CYCGRG 2 cut(s) 218, 323
Bsp1286I GDGCHC 2 cut(s) 108, 780
Bsp143I GATC 8 cut(s) 21, 36, 411, 429, 488, 636, 796, 855
BspCNI CTCAG 3 cut(s) 652, 1198, 1819
BspFNI CGCG 6 cut(s) 152, 154, 252, 360, 845, 1376
BspHI TCATGA 2 cut(s) 264, 1327
BspLI GGNNCC 7 cut(s) 369, 569, 570, 656, 657, 798, 1696
BspPI GGATC 6 cut(s) 16, 31, 424, 791, 804, 850
BspTNI GGTCTC 1 cut(s) 517
BsrDI GCAATG 5 cut(s) 1117, 1224, 1414, 1770, 1775
BsrFI RCCGGY 2 cut(s) 131, 470
BsrI ACTGG 1 cut(s) 513
BssAI RCCGGY 2 cut(s) 131, 470
BssECI CCNNGG 7 cut(s) 294, 397, 753, 1129, 1200, 1374, 1437
BssMI GATC 8 cut(s) 21, 36, 411, 429, 488, 636, 796, 855
BssNI GRCGYC 1 cut(s) 311
BssSI CACGAG 1 cut(s) 630
BssT1I CCWWGG 2 cut(s) 1200, 1437
Bst2BI CACGAG 1 cut(s) 630
Bst2UI CCWGG 5 cut(s) 26, 146, 754, 794, 860
Bst4CI ACNGT 7 cut(s) 81, 1036, 1133, 1264, 1458, 1509, 1670
BstACI GRCGYC 1 cut(s) 311
BstAPI GCANNNNNTGC 2 cut(s) 632, 679
BstC8I GCNNGC 9 cut(s) 45, 129, 133, 156, 160, 404, 1245, 1639, 1848
BstDEI CTNAG 5 cut(s) 591, 660, 1206, 1248, 1806
BstDSI CCRYGG 3 cut(s) 294, 1129, 1374
BstEII GGTNACC 1 cut(s) 1195
BstENI CCTNNNNNAGG 2 cut(s) 143, 221
BstF5I GGATG 6 cut(s) 499, 781, 979, 1093, 1339, 1486
BstFNI CGCG 6 cut(s) 152, 154, 252, 360, 845, 1376
BstH2I RGCGCY 2 cut(s) 1235, 1295
BstHHI GCGC 7 cut(s) 154, 254, 808, 1105, 1234, 1294, 1407
BstKTI GATC 8 cut(s) 24, 39, 414, 432, 491, 639, 799, 858
BstMAI GTCTC 5 cut(s) 367, 378, 517, 519, 1790
BstMBI GATC 8 cut(s) 21, 36, 411, 429, 488, 636, 796, 855
BstMCI CGRYCG 5 cut(s) 35, 382, 414, 491, 639
BstNI CCWGG 5 cut(s) 26, 146, 754, 794, 860
BstNSI RCATGY 2 cut(s) 901, 1641
BstPI GGTNACC 1 cut(s) 1195
BstUI CGCG 6 cut(s) 152, 154, 252, 360, 845, 1376
BstV1I GCAGC 8 cut(s) 328, 331, 339, 638, 1016, 1085, 1420, 1563
BstV2I GAAGAC 1 cut(s) 1194
BstX2I RGATCY 2 cut(s) 21, 796
BstYI RGATCY 2 cut(s) 21, 796
BstZI CGGCCG 1 cut(s) 32
BtgI CCRYGG 3 cut(s) 294, 1129, 1374
BtrI CACGTC 2 cut(s) 188, 343
BtsCI GGATG 6 cut(s) 499, 781, 979, 1093, 1339, 1486
BtsIMutI CAGTG 2 cut(s) 506, 1666
Cac8I GCNNGC 9 cut(s) 45, 129, 133, 156, 160, 404, 1245, 1639, 1848
CciI TCATGA 2 cut(s) 264, 1327
CfoI GCGC 7 cut(s) 154, 254, 808, 1105, 1234, 1294, 1407
Cfr10I RCCGGY 2 cut(s) 131, 470
Cfr13I GGNCC 8 cut(s) 28, 226, 367, 568, 613, 655, 939, 1562
Cfr42I CCGCGG 1 cut(s) 1377
CseI GACGC 2 cut(s) 167, 349
Csp6I GTAC 3 cut(s) 394, 1183, 1505
CspCI CAANNNNNGTGG 2 cut(s) 561, 596
CviAII CATG 9 cut(s) 100, 265, 730, 898, 956, 971, 1328, 1638, 1658
CviQI GTAC 3 cut(s) 394, 1183, 1505
DdeI CTNAG 5 cut(s) 591, 660, 1206, 1248, 1806
DpnI GATC 8 cut(s) 23, 38, 413, 431, 490, 638, 798, 857
DpnII GATC 8 cut(s) 21, 36, 411, 429, 488, 636, 796, 855
EaeI YGGCCR 3 cut(s) 32, 45, 519
EagI CGGCCG 1 cut(s) 32
EciI GGCGGA 3 cut(s) 131, 1379, 1493
Ecl136II GAGCTC 1 cut(s) 106
EclXI CGGCCG 1 cut(s) 32
Eco130I CCWWGG 2 cut(s) 1200, 1437
Eco24I GRGCYC 1 cut(s) 108
Eco31I GGTCTC 1 cut(s) 517
Eco47I GGWCC 2 cut(s) 568, 655
Eco52I CGGCCG 1 cut(s) 32
Eco53kI GAGCTC 1 cut(s) 106
Eco88I CYCGRG 2 cut(s) 218, 323
Eco91I GGTNACC 1 cut(s) 1195
EcoICRI GAGCTC 1 cut(s) 106
EcoNI CCTNNNNNAGG 2 cut(s) 143, 221
EcoO109I RGGNCCY 3 cut(s) 226, 568, 655
EcoO65I GGTNACC 1 cut(s) 1195
EcoRI GAATTC 2 cut(s) 328, 1390
EcoRII CCWGG 5 cut(s) 24, 144, 752, 792, 858
EcoT14I CCWWGG 2 cut(s) 1200, 1437
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 2 cut(s) 1200, 1437
Esp3I CGTCTC 2 cut(s) 367, 378
FaeI CATG 9 cut(s) 103, 268, 733, 901, 959, 974, 1331, 1641, 1661
FalI AAGNNNNNCTT 2 cut(s) 1803, 1835
FaqI GGGAC 2 cut(s) 554, 668
FatI CATG 9 cut(s) 99, 264, 729, 897, 955, 970, 1327, 1637, 1657
FauI CCCGC 1 cut(s) 298
FokI GGATG 6 cut(s) 506, 768, 966, 1080, 1346, 1493
FriOI GRGCYC 1 cut(s) 108
FspBI CTAG 3 cut(s) 647, 770, 885
FspI TGCGCA 2 cut(s) 807, 1104
GlaI GCGC 7 cut(s) 153, 253, 807, 1104, 1233, 1293, 1406
GsaI CCCAGC 1 cut(s) 1145
GsuI CTGGAG 1 cut(s) 1083
HaeII RGCGCY 2 cut(s) 1235, 1295
HapII CCGG 7 cut(s) 31, 132, 471, 652, 698, 1158, 1193
HgaI GACGC 2 cut(s) 167, 349
HhaI GCGC 7 cut(s) 154, 254, 808, 1105, 1234, 1294, 1407
Hin1I GRCGYC 1 cut(s) 311
Hin1II CATG 9 cut(s) 103, 268, 733, 901, 959, 974, 1331, 1641, 1661
Hin6I GCGC 7 cut(s) 152, 252, 806, 1103, 1232, 1292, 1405
HinP1I GCGC 7 cut(s) 152, 252, 806, 1103, 1232, 1292, 1405
HincII GTYRAC 1 cut(s) 1839
HindII GTYRAC 1 cut(s) 1839
HindIII AAGCTT 1 cut(s) 1241
HinfI GANTC 6 cut(s) 736, 994, 1283, 1464, 1708, 1744
HpaII CCGG 7 cut(s) 31, 132, 471, 652, 698, 1158, 1193
HphI GGTGA 5 cut(s) 49, 271, 1079, 1363, 1582
Hpy166II GTNNAC 2 cut(s) 1720, 1839
Hpy188I TCNGA 9 cut(s) 89, 183, 305, 376, 493, 766, 984, 1014, 1396
Hpy188III TCNNGA 8 cut(s) 220, 265, 325, 1328, 1787, 1808, 1923, 1932
Hpy8I GTNNAC 2 cut(s) 1720, 1839
Hpy99I CGWCG 8 cut(s) 74, 192, 203, 316, 344, 380, 392, 1586
HpyAV CCTTC 8 cut(s) 10, 217, 554, 577, 590, 1207, 1423, 1758
HpyCH4III ACNGT 7 cut(s) 81, 1036, 1133, 1264, 1458, 1509, 1670
HpyCH4IV ACGT 3 cut(s) 187, 311, 342
HpyF3I CTNAG 5 cut(s) 591, 660, 1206, 1248, 1806
HpySE526I ACGT 3 cut(s) 187, 311, 342
Hsp92I GRCGYC 1 cut(s) 311
Hsp92II CATG 9 cut(s) 103, 268, 733, 901, 959, 974, 1331, 1641, 1661
HspAI GCGC 7 cut(s) 152, 252, 806, 1103, 1232, 1292, 1405
KflI GGGWCCC 2 cut(s) 568, 655
KroI GCCGGC 1 cut(s) 131
KroNI GCCGGC 1 cut(s) 133
KspI CCGCGG 1 cut(s) 1377
Kzo9I GATC 8 cut(s) 21, 36, 411, 429, 488, 636, 796, 855
LmnI GCTCC 7 cut(s) 103, 360, 448, 484, 670, 1070, 1909
Lsp1109I GCAGC 8 cut(s) 328, 331, 339, 638, 1016, 1085, 1420, 1563
LweI GCATC 7 cut(s) 201, 270, 484, 988, 1005, 1284, 1675
MaeI CTAG 3 cut(s) 647, 770, 885
MaeII ACGT 3 cut(s) 187, 311, 342
MaeIII GTNAC 7 cut(s) 55, 642, 725, 932, 1195, 1258, 1766
MalI GATC 8 cut(s) 23, 38, 413, 431, 490, 638, 798, 857
MboI GATC 8 cut(s) 21, 36, 411, 429, 488, 636, 796, 855
MboII GAAGA 5 cut(s) 721, 745, 954, 1199, 1823
MfeI CAATTG 2 cut(s) 9, 1872
MflI RGATCY 2 cut(s) 21, 796
MhlI GDGCHC 2 cut(s) 108, 780
MlsI TGGCCA 1 cut(s) 521
MluCI AATT 6 cut(s) 9, 328, 1021, 1390, 1648, 1872
MluNI TGGCCA 1 cut(s) 521
MlyI GAGTC 1 cut(s) 1292
MmeI TCCRAC 6 cut(s) 112, 206, 399, 444, 459, 1887
Mox20I TGGCCA 1 cut(s) 521
MroNI GCCGGC 1 cut(s) 131
MscI TGGCCA 1 cut(s) 521
MseI TTAA 2 cut(s) 1170, 1338
MslI CAYNNNNRTG 2 cut(s) 1098, 1332
Msp20I TGGCCA 1 cut(s) 521
MspA1I CMGCKG 4 cut(s) 43, 577, 1376, 1714
MspI CCGG 7 cut(s) 31, 132, 471, 652, 698, 1158, 1193
MunI CAATTG 2 cut(s) 9, 1872
Mva1269I GAATGC 1 cut(s) 831
MvaI CCWGG 5 cut(s) 26, 146, 754, 794, 860
MvnI CGCG 6 cut(s) 152, 154, 252, 360, 845, 1376
NaeI GCCGGC 1 cut(s) 133
NciI CCSGG 5 cut(s) 31, 653, 698, 1159, 1193
NdeII GATC 8 cut(s) 21, 36, 411, 429, 488, 636, 796, 855
NgoMIV GCCGGC 1 cut(s) 131
NlaIII CATG 9 cut(s) 103, 268, 733, 901, 959, 974, 1331, 1641, 1661
NlaIV GGNNCC 7 cut(s) 369, 569, 570, 656, 657, 798, 1696
NmeAIII GCCGAG 3 cut(s) 344, 378, 799
NmuCI GTSAC 2 cut(s) 55, 725
NsbI TGCGCA 2 cut(s) 807, 1104
NspI RCATGY 2 cut(s) 901, 1641
PaeI GCATGC 1 cut(s) 1641
PaeR7I CTCGAG 2 cut(s) 218, 323
PagI TCATGA 2 cut(s) 264, 1327
PciI ACATGT 1 cut(s) 897
PcsI WCGNNNNNNNCGW 6 cut(s) 171, 204, 384, 420, 908, 1355
PctI GAATGC 1 cut(s) 831
PdiI GCCGGC 1 cut(s) 133
PfeI GAWTC 5 cut(s) 736, 994, 1464, 1708, 1744
PflFI GACNNNGTC 1 cut(s) 53
PfoI TCCNGGA 2 cut(s) 858, 1157
Ple19I CGATCG 3 cut(s) 414, 491, 639
PleI GAGTC 1 cut(s) 1291
PpsI GAGTC 1 cut(s) 1291
PpuMI RGGWCCY 2 cut(s) 568, 655
PscI ACATGT 1 cut(s) 897
Psp124BI GAGCTC 1 cut(s) 108
Psp5II RGGWCCY 2 cut(s) 568, 655
Psp6I CCWGG 5 cut(s) 24, 144, 752, 792, 858
PspEI GGTNACC 1 cut(s) 1195
PspFI CCCAGC 1 cut(s) 1141
PspGI CCWGG 5 cut(s) 24, 144, 752, 792, 858
PspN4I GGNNCC 7 cut(s) 369, 569, 570, 656, 657, 798, 1696
PspPI GGNCC 8 cut(s) 28, 226, 367, 568, 613, 655, 939, 1562
PspPPI RGGWCCY 2 cut(s) 568, 655
PsrI GAACNNNNNNTAC 2 cut(s) 1869, 1901
PsuI RGATCY 2 cut(s) 21, 796
PsyI GACNNNGTC 1 cut(s) 53
PvuI CGATCG 3 cut(s) 414, 491, 639
PvuII CAGCTG 2 cut(s) 43, 1714
RsaI GTAC 3 cut(s) 395, 1184, 1506
RsaNI GTAC 3 cut(s) 394, 1183, 1505
RseI CAYNNNNRTG 2 cut(s) 1098, 1332
SacI GAGCTC 1 cut(s) 108
SacII CCGCGG 1 cut(s) 1377
SaqAI TTAA 2 cut(s) 1170, 1338
Sau3AI GATC 8 cut(s) 21, 36, 411, 429, 488, 636, 796, 855
Sau96I GGNCC 8 cut(s) 28, 226, 367, 568, 613, 655, 939, 1562
SchI GAGTC 1 cut(s) 1292
SduI GDGCHC 2 cut(s) 108, 780
SfaNI GCATC 7 cut(s) 201, 270, 484, 988, 1005, 1284, 1675
Sfr274I CTCGAG 2 cut(s) 218, 323
Sfr303I CCGCGG 1 cut(s) 1377
SgrBI CCGCGG 1 cut(s) 1377
SinI GGWCC 2 cut(s) 568, 655
SlaI CTCGAG 2 cut(s) 218, 323
SmiMI CAYNNNNRTG 2 cut(s) 1098, 1332
SmlI CTYRAG 3 cut(s) 218, 323, 1399
SmoI CTYRAG 3 cut(s) 218, 323, 1399
SphI GCATGC 1 cut(s) 1641
Sse9I AATT 6 cut(s) 9, 328, 1021, 1390, 1648, 1872
SspMI CTAG 3 cut(s) 647, 770, 885
SstI GAGCTC 1 cut(s) 108
StyI CCWWGG 2 cut(s) 1200, 1437
TaaI ACNGT 7 cut(s) 81, 1036, 1133, 1264, 1458, 1509, 1670
TaiI ACGT 3 cut(s) 190, 314, 345
TaqI TCGA 6 cut(s) 198, 219, 324, 911, 1537, 1581
TaqII GACCGA 1 cut(s) 396
TasI AATT 6 cut(s) 9, 328, 1021, 1390, 1648, 1872
TauI GCSGC 7 cut(s) 8, 68, 152, 252, 409, 1123, 1226
TfiI GAWTC 5 cut(s) 736, 994, 1464, 1708, 1744
Tru1I TTAA 2 cut(s) 1170, 1338
Tru9I TTAA 2 cut(s) 1170, 1338
TscAI CASTG 2 cut(s) 513, 1673
TseFI GTSAC 2 cut(s) 55, 725
TseI GCWGC 8 cut(s) 316, 319, 352, 626, 1004, 1073, 1433, 1576
Tsp45I GTSAC 2 cut(s) 55, 725
TspDTI ATGAA 6 cut(s) 281, 746, 896, 1226, 1740, 1878
TspGWI ACGGA 3 cut(s) 134, 555, 789
TspRI CASTG 2 cut(s) 513, 1673
Tth111I GACNNNGTC 1 cut(s) 53
VpaK11BI GGWCC 2 cut(s) 568, 655
XagI CCTNNNNNAGG 2 cut(s) 143, 221
XapI RAATTY 3 cut(s) 328, 1021, 1390
XceI RCATGY 2 cut(s) 901, 1641
XcmI CCANNNNNNNNNTGG 2 cut(s) 1444, 1903
XhoI CTCGAG 2 cut(s) 218, 323
XspI CTAG 3 cut(s) 647, 770, 885
ZraI GACGTC 1 cut(s) 312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.