MD05G1118400.v1.1

Armadillo/beta-catenin-like repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0015849
Physical Location & Seq
Forward (+)
23940786 .. 23942732
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1118400.v1.1.491

Sequence Viewer

Length: 1947 bp
ATGGCGGCGATTGTGAAGGAGATCCTGGCAAGGCCAATACAATTGGCGGACCAGGTGAGCAAGGCCGCCGACGAGGCACAATCAAACAAACAAGAGTGCATGGAGCTCAAATCCAAGACCGAGAAGCTCGCCGGCCTCCTCCGCCAGGCAGCGCGTGCGAGCAACGATCTCTACGAGCGCCCCACGCGTCGCATCATCGACGATACGGAACAAGCCCTCGACAAGGCCCTCACCCTCGTCATCAAGTGCCGAGCCACCGGCCTCATGCAACGCGTCTTCACCATCATCCCCAGCGGCTCGTTCAAAAGGATCGGTCAGTCCCTCGACAACAACATTGGAGACGTGTCGTGGCTCCTCCGAGTCTCAGCCTCCTCCGACGACCGCGACGACGAGTATCTGGGGCTTCCCCCGATCGCCTCCAACGAGCCCATCCTCTGCCTCATTTGGGAACAGATTGCGACCCTCCACACTGGCTCGATGGAGGAGCGATCGGATGCGGCAGCTTCTTTGGTGTCGTTGGCAAAAGACAACGACAGGTACGGGAGGCTGATTATTGAGGAAGGCGGGGTGCCTCCGCTGCTGAAGATGCTGAAGGAAGGAGGAAACGAAGGACAGGAGAGCGCAGCCAGGGCAATTGGGTTGTTAGGAAAGGACCCCGAAAGCGTTGAACAGATTGTGAACGCGGGAGTCTGCCCAGTGTTTGCGAAAATCCTCAAAGAAGGCAACATGAAAGTCCAGGCGCTTGTCGCCTGGGCAGTCTCCGAAATGGCGGAGAATCATCCGAAATGCCAAGACCCTTTTGCGCAAAACAATGTCATCCGATTGCTCGTGAGTCATCTCGCTTTTGAGACGATTCAGGAGCATAGCAAGTACGTCATACCGAGCAAGCAACAAATGTCGTTGCACTCGATTGTCATGGGGAGCAGCAAGAACACCGAGCATCAGACGGCACACCCTATAACGGGGAATCAAAACACGTTTAGTCAGATGCAGAATCTTGTGAGTAGCGCAATGACTATGAAGAATCAGGGTTCGGCTCCCCCTGACTCTGCTCATGGCCAAGGGAAGCCGACTCAGAATAGCAATCACCAGAACCTTCATCATCCACCTCCAACTCACCACATTGTGAGACCACACAATCACCATGTGGCGCTGTCCGGGGCTAGCATCAAGGGGAGGGAGTACGAGGACCCCGAAACCAAGGCGGAGATGAAGGCAATGGCGGCGAGGGCACTGTGGAAGCTTTCCAAGGGGAATGCGAGTGTTTGTGGCAGCATCACGGAGTCAAGAGCGCTTTTATGTTTCGCAGTTTTACTAGAAAAAGGTTCTTGGGACGTTCAGCAGAATTCGGCCAAAGCACTGATGGAGATAACCGCAGTGGCTGAGCAGAATGCGGACTTGAGGCGGTCGGCTTTCAAGCCAACATCCCCCGCCTGCAAAGCCGTGGTCGAGCAGCTTCTGAAAATAGTCGAAAAGGCAGACTCCGACCTGCTTGAACCGTGCATACAAGCGATCGGAAACTTAGCAAGAACTTTCAGAGCAACCGAGACGCGATTCATTGGCCCATTGGTGAAGCTGCTCGATGAAACAGAAACGAGTATTTCTACGGCGGCTGTGATTGCACTGAACAAGTTTGCATGCACTGAAAATTTCCTCCACGTAAATCACTGTAAAGCGATTATAGACGCTGGGGGAACCAAGCATCTGATTCAACTGGTTTACTTTGGGGAATCCGGAGTGCAGATTCCGTCGTTGATTCTGCTGTGCTACATTGCACTGCATATTCCGGACAGCGAGACGCTTGCTCAGGAGGAGGTACTGATTGTGCTAGAATGGTCGACAAAGCAGGCTCATTTGGCGAATGATGAGTCAGTCGAACAATTGTTACCGGAAGCTAAAAGTAGGCTGGAGCTTTATCAGTCTAGAGGATCAAGAGGATTTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm

Protein Analysis

649

Amino Acids

70.96

Weight (kDa)

6.18

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7792 PF25055 6 - 122 3.4e-49 Domain of unknown function (DUF7792)
ARM_ARMC5 PF24768 186 - 341 1.3e-06 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015849)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34940
fragaria_vesca FvH4_2g01590
malus_domestica MD05G1118400.v1.1 MD10G1121400.v1.1
prunus_persica Prupe.8G162900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0244271
rosa_laevigata RLG00000015369
rosa_multiflora Rmu_sc0006898.1_g000016
rosa_roxburghii Rroxscaffold_7G00215890
rosa_rugosa Rorug05G0507900
rosa_samantha Rh6AG022900 Rh6BG018700 Rh6CG015900 Rh6DG017100
rosa_wichuraiana Rw6G001900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 804
Acc36I ACCTGC 1 cut(s) 1497
AccB1I GGYRCC 1 cut(s) 568
AccI GTMKAC 1 cut(s) 1838
AccII CGCG 6 cut(s) 154, 187, 273, 384, 683, 1552
AccIII TCCGGA 2 cut(s) 1733, 1786
AclWI GGATC 3 cut(s) 16, 317, 1936
AcoI YGGCCR 2 cut(s) 1057, 1350
AcsI RAATTY 2 cut(s) 1345, 1648
AcuI CTGAAG 2 cut(s) 602, 611
AdeI CACNNNGTG 2 cut(s) 1126, 1147
AfaI GTAC 4 cut(s) 539, 872, 1184, 1818
AfeI AGCGCT 1 cut(s) 1293
AfiI CCNNNNNNNGG 5 cut(s) 145, 223, 445, 961, 962
AflIII ACRYGT 4 cut(s) 185, 271, 342, 975
AgsI TTSAA 5 cut(s) 304, 668, 1417, 1496, 1712
AjiI CACGTC 1 cut(s) 343
AjnI CCWGG 6 cut(s) 24, 51, 144, 626, 735, 749
AluBI AGCT 8 cut(s) 106, 127, 503, 1243, 1456, 1576, 1895, 1912
AluI AGCT 8 cut(s) 106, 127, 503, 1243, 1456, 1576, 1895, 1912
Alw21I GWGCWC 1 cut(s) 108
Alw26I GTCTC 7 cut(s) 333, 367, 763, 842, 1123, 1541, 1790
AlwI GGATC 3 cut(s) 16, 317, 1936
AlwNI CAGNNNCTG 2 cut(s) 1382, 1459
Aor13HI TCCGGA 2 cut(s) 1733, 1786
Aor51HI AGCGCT 1 cut(s) 1293
AoxI GGCC 8 cut(s) 32, 63, 133, 225, 259, 1057, 1350, 1561
ApeKI GCWGC 8 cut(s) 149, 500, 577, 623, 924, 1272, 1453, 1576
ApoI RAATTY 2 cut(s) 1345, 1648
ArsI GACNNNNNNTTYG 4 cut(s) 1431, 1463, 1853, 1885
AspLEI GCGC 8 cut(s) 154, 180, 623, 742, 805, 1010, 1153, 1294
AspS9I GGNCC 5 cut(s) 49, 226, 652, 1189, 1562
AsuC2I CCSGG 1 cut(s) 1159
AsuHPI GGTGA 7 cut(s) 67, 223, 271, 1079, 1109, 1133, 1582
AsuNHI GCTAGC 1 cut(s) 1163
AvaII GGWCC 3 cut(s) 49, 652, 1189
BaeGI GKGCMC 1 cut(s) 1234
BalI TGGCCA 1 cut(s) 1059
BanI GGYRCC 1 cut(s) 568
BanII GRGCYC 2 cut(s) 108, 429
BauI CACGAG 1 cut(s) 827
BbsI GAAGAC 1 cut(s) 268
Bbv12I GWGCWC 1 cut(s) 108
BbvI GCAGC 8 cut(s) 161, 512, 564, 635, 936, 1284, 1465, 1563
BccI CCATC 4 cut(s) 290, 437, 472, 1357
BceAI ACGGC 3 cut(s) 963, 1427, 1623
BcgI CGANNNNNNTGC 2 cut(s) 1784, 1818
BciT130I CCWGG 6 cut(s) 26, 53, 146, 628, 737, 751
BcnI CCSGG 1 cut(s) 1159
BcoDI GTCTC 7 cut(s) 333, 367, 763, 842, 1123, 1541, 1790
BfaI CTAG 4 cut(s) 1164, 1316, 1829, 1923
BfoI RGCGCY 4 cut(s) 181, 743, 1154, 1295
BfuAI ACCTGC 1 cut(s) 1497
BglI GCCNNNNNGGC 1 cut(s) 74
BlpI GCTNAGC 1 cut(s) 1383
Bme1390I CCNGG 7 cut(s) 26, 53, 146, 628, 737, 751, 1159
Bme18I GGWCC 3 cut(s) 49, 652, 1189
BmgBI CACGTC 1 cut(s) 343
BmgT120I GGNCC 5 cut(s) 49, 226, 652, 1189, 1562
BmiI GGNNCC 6 cut(s) 353, 570, 654, 1038, 1191, 1696
BmrFI CCNGG 7 cut(s) 26, 53, 146, 628, 737, 751, 1159
BmrI ACTGGG 1 cut(s) 689
BmsI GCATC 8 cut(s) 201, 484, 576, 949, 978, 1176, 1284, 1711
BmtI GCTAGC 1 cut(s) 1167
BmuI ACTGGG 1 cut(s) 689
BpiI GAAGAC 1 cut(s) 268
BpmI CTGGAG 1 cut(s) 1928
Bpu10I CCTNAGC 1 cut(s) 1806
Bpu1102I GCTNAGC 1 cut(s) 1383
BpuEI CTTGAG 1 cut(s) 1420
BpuMI CCSGG 1 cut(s) 1159
BsaAI YACGTR 1 cut(s) 1660
BsaI GGTCTC 1 cut(s) 1123
BsaJI CCNNGG 7 cut(s) 627, 750, 1060, 1158, 1200, 1248, 1443
BsaWI WCCGGW 3 cut(s) 1733, 1786, 1888
Bsc4I CCNNNNNNNGG 5 cut(s) 145, 223, 445, 961, 962
Bse118I RCCGGY 2 cut(s) 131, 257
Bse1I ACTGG 3 cut(s) 475, 695, 1719
Bse3DI GCAATG 3 cut(s) 1017, 1224, 1770
BseAI TCCGGA 2 cut(s) 1733, 1786
BseBI CCWGG 6 cut(s) 26, 53, 146, 628, 737, 751
BseDI CCNNGG 7 cut(s) 627, 750, 1060, 1158, 1200, 1248, 1443
BseGI GGATG 7 cut(s) 285, 429, 499, 778, 816, 1102, 1424
BseLI CCNNNNNNNGG 5 cut(s) 145, 223, 445, 961, 962
BseMI GCAATG 3 cut(s) 1017, 1224, 1770
BseMII CTCAG 4 cut(s) 378, 1088, 1374, 1820
BseNI ACTGG 3 cut(s) 475, 695, 1719
BseRI GAGGAG 5 cut(s) 128, 344, 361, 497, 1826
BseSI GKGCMC 1 cut(s) 1234
BseXI GCAGC 8 cut(s) 161, 512, 564, 635, 936, 1284, 1465, 1563
BseYI CCCAGC 2 cut(s) 290, 1688
BsgI GTGCAG 1 cut(s) 1760
Bsh1236I CGCG 6 cut(s) 154, 187, 273, 384, 683, 1552
Bsh1285I CGRYCG 5 cut(s) 382, 414, 491, 1409, 1515
BshFI GGCC 8 cut(s) 34, 65, 135, 227, 261, 1059, 1352, 1563
BshNI GGYRCC 1 cut(s) 568
BsiEI CGRYCG 5 cut(s) 382, 414, 491, 1409, 1515
BsiHKAI GWGCWC 1 cut(s) 108
BsiSI CCGG 6 cut(s) 132, 258, 1158, 1734, 1787, 1889
BslFI GGGAC 2 cut(s) 304, 1346
BslI CCNNNNNNNGG 5 cut(s) 145, 223, 445, 961, 962
BsmAI GTCTC 7 cut(s) 333, 367, 763, 842, 1123, 1541, 1790
BsmBI CGTCTC 4 cut(s) 333, 842, 1541, 1790
BsmFI GGGAC 2 cut(s) 304, 1346
BsmI GAATGC 2 cut(s) 1261, 1396
BsnI GGCC 8 cut(s) 34, 65, 135, 227, 261, 1059, 1352, 1563
Bso31I GGTCTC 1 cut(s) 1123
Bsp1286I GDGCHC 3 cut(s) 108, 429, 1234
Bsp13I TCCGGA 2 cut(s) 1733, 1786
Bsp143I GATC 7 cut(s) 21, 166, 309, 411, 488, 1512, 1928
Bsp1720I GCTNAGC 1 cut(s) 1383
BspANI GGCC 8 cut(s) 34, 65, 135, 227, 261, 1059, 1352, 1563
BspCNI CTCAG 4 cut(s) 377, 1087, 1375, 1819
BspEI TCCGGA 2 cut(s) 1733, 1786
BspFNI CGCG 6 cut(s) 154, 187, 273, 384, 683, 1552
BspLI GGNNCC 6 cut(s) 353, 570, 654, 1038, 1191, 1696
BspMI ACCTGC 1 cut(s) 1497
BspOI GCTAGC 1 cut(s) 1167
BspPI GGATC 3 cut(s) 16, 317, 1936
BspT107I GGYRCC 1 cut(s) 568
BspTNI GGTCTC 1 cut(s) 1123
BsrDI GCAATG 3 cut(s) 1017, 1224, 1770
BsrFI RCCGGY 2 cut(s) 131, 257
BsrI ACTGG 3 cut(s) 475, 695, 1719
BssAI RCCGGY 2 cut(s) 131, 257
BssECI CCNNGG 7 cut(s) 627, 750, 1060, 1158, 1200, 1248, 1443
BssMI GATC 7 cut(s) 21, 166, 309, 411, 488, 1512, 1928
BssSI CACGAG 1 cut(s) 827
BssT1I CCWWGG 3 cut(s) 1060, 1200, 1248
Bst2BI CACGAG 1 cut(s) 827
Bst2UI CCWGG 6 cut(s) 26, 53, 146, 628, 737, 751
Bst4CI ACNGT 3 cut(s) 1236, 1500, 1670
BstAPI GCANNNNNTGC 1 cut(s) 155
BstBAI YACGTR 1 cut(s) 1660
BstDEI CTNAG 5 cut(s) 364, 1074, 1383, 1522, 1806
BstDSI CCRYGG 1 cut(s) 1443
BstENI CCTNNNNNAGG 2 cut(s) 143, 221
BstF5I GGATG 7 cut(s) 285, 429, 499, 778, 816, 1102, 1424
BstFNI CGCG 6 cut(s) 154, 187, 273, 384, 683, 1552
BstH2I RGCGCY 4 cut(s) 181, 743, 1154, 1295
BstHHI GCGC 8 cut(s) 154, 180, 623, 742, 805, 1010, 1153, 1294
BstKTI GATC 7 cut(s) 24, 169, 312, 414, 491, 1515, 1931
BstMAI GTCTC 7 cut(s) 333, 367, 763, 842, 1123, 1541, 1790
BstMBI GATC 7 cut(s) 21, 166, 309, 411, 488, 1512, 1928
BstMCI CGRYCG 5 cut(s) 382, 414, 491, 1409, 1515
BstNI CCWGG 6 cut(s) 26, 53, 146, 628, 737, 751
BstNSI RCATGY 1 cut(s) 1641
BstSCI CCNGG 7 cut(s) 24, 51, 144, 626, 735, 749, 1157
BstSLI GKGCMC 1 cut(s) 1234
BstUI CGCG 6 cut(s) 154, 187, 273, 384, 683, 1552
BstV1I GCAGC 8 cut(s) 161, 512, 564, 635, 936, 1284, 1465, 1563
BstV2I GAAGAC 1 cut(s) 268
BstX2I RGATCY 1 cut(s) 21
BstYI RGATCY 1 cut(s) 21
BsuRI GGCC 8 cut(s) 34, 65, 135, 227, 261, 1059, 1352, 1563
BtgI CCRYGG 1 cut(s) 1443
BtrI CACGTC 1 cut(s) 343
BtsCI GGATG 7 cut(s) 285, 429, 499, 778, 816, 1102, 1424
BtsI GCAGTG 2 cut(s) 1383, 1775
BtsIMutI CAGTG 9 cut(s) 468, 702, 1232, 1358, 1383, 1622, 1641, 1666, 1775
BveI ACCTGC 1 cut(s) 1497
CaiI CAGNNNCTG 2 cut(s) 1382, 1459
CfoI GCGC 8 cut(s) 154, 180, 623, 742, 805, 1010, 1153, 1294
Cfr10I RCCGGY 2 cut(s) 131, 257
Cfr13I GGNCC 5 cut(s) 49, 226, 652, 1189, 1562
CseI GACGC 5 cut(s) 176, 262, 1558, 1694, 1807
CsiI ACCWGGT 1 cut(s) 51
Csp6I GTAC 4 cut(s) 538, 871, 1183, 1817
CviAII CATG 7 cut(s) 100, 265, 727, 916, 1055, 1145, 1638
CviQI GTAC 4 cut(s) 538, 871, 1183, 1817
DdeI CTNAG 5 cut(s) 364, 1074, 1383, 1522, 1806
DpnI GATC 7 cut(s) 23, 168, 311, 413, 490, 1514, 1930
DpnII GATC 7 cut(s) 21, 166, 309, 411, 488, 1512, 1928
DraIII CACNNNGTG 2 cut(s) 1126, 1147
EaeI YGGCCR 2 cut(s) 1057, 1350
EciI GGCGGA 4 cut(s) 62, 131, 785, 1220
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 3 cut(s) 1060, 1200, 1248
Eco24I GRGCYC 2 cut(s) 108, 429
Eco31I GGTCTC 1 cut(s) 1123
Eco47I GGWCC 3 cut(s) 49, 652, 1189
Eco47III AGCGCT 1 cut(s) 1293
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 2 cut(s) 602, 611
EcoICRI GAGCTC 1 cut(s) 106
EcoNI CCTNNNNNAGG 2 cut(s) 143, 221
EcoO109I RGGNCCY 3 cut(s) 226, 652, 1189
EcoRI GAATTC 1 cut(s) 1345
EcoRII CCWGG 6 cut(s) 24, 51, 144, 626, 735, 749
EcoT14I CCWWGG 3 cut(s) 1060, 1200, 1248
EcoT38I GRGCYC 2 cut(s) 108, 429
ErhI CCWWGG 3 cut(s) 1060, 1200, 1248
Esp3I CGTCTC 4 cut(s) 333, 842, 1541, 1790
FaeI CATG 7 cut(s) 103, 268, 730, 919, 1058, 1148, 1641
FaqI GGGAC 2 cut(s) 304, 1346
FatI CATG 7 cut(s) 99, 264, 726, 915, 1054, 1144, 1637
FauI CCCGC 3 cut(s) 557, 676, 1438
FblI GTMKAC 1 cut(s) 1838
FokI GGATG 7 cut(s) 272, 416, 506, 765, 803, 1089, 1411
FriOI GRGCYC 2 cut(s) 108, 429
FspBI CTAG 4 cut(s) 1164, 1316, 1829, 1923
FspI TGCGCA 1 cut(s) 804
GlaI GCGC 8 cut(s) 153, 179, 622, 741, 804, 1009, 1152, 1293
GsaI CCCAGC 2 cut(s) 294, 1692
GsuI CTGGAG 1 cut(s) 1928
HaeII RGCGCY 4 cut(s) 181, 743, 1154, 1295
HaeIII GGCC 8 cut(s) 34, 65, 135, 227, 261, 1059, 1352, 1563
HapII CCGG 6 cut(s) 132, 258, 1158, 1734, 1787, 1889
HgaI GACGC 5 cut(s) 176, 262, 1558, 1694, 1807
HhaI GCGC 8 cut(s) 154, 180, 623, 742, 805, 1010, 1153, 1294
Hin1II CATG 7 cut(s) 103, 268, 730, 919, 1058, 1148, 1641
Hin6I GCGC 8 cut(s) 152, 178, 621, 740, 803, 1008, 1151, 1292
HinP1I GCGC 8 cut(s) 152, 178, 621, 740, 803, 1008, 1151, 1292
HincII GTYRAC 1 cut(s) 1839
HindII GTYRAC 1 cut(s) 1839
HindIII AAGCTT 1 cut(s) 1241
HpaII CCGG 6 cut(s) 132, 258, 1158, 1734, 1787, 1889
HphI GGTGA 7 cut(s) 67, 223, 271, 1079, 1109, 1133, 1582
Hpy166II GTNNAC 3 cut(s) 679, 1720, 1839
Hpy188III TCNNGA 8 cut(s) 829, 857, 1287, 1734, 1787, 1808, 1923, 1932
Hpy8I GTNNAC 3 cut(s) 679, 1720, 1839
Hpy99I CGWCG 7 cut(s) 74, 192, 203, 380, 389, 392, 1753
HpyAV CCTTC 8 cut(s) 10, 554, 586, 590, 602, 713, 1106, 1207
HpyCH4III ACNGT 3 cut(s) 1236, 1500, 1670
HpyCH4IV ACGT 5 cut(s) 342, 873, 977, 1335, 1659
HpyF3I CTNAG 5 cut(s) 364, 1074, 1383, 1522, 1806
HpySE526I ACGT 5 cut(s) 342, 873, 977, 1335, 1659
Hsp92II CATG 7 cut(s) 103, 268, 730, 919, 1058, 1148, 1641
HspAI GCGC 8 cut(s) 152, 178, 621, 740, 803, 1008, 1151, 1292
Kpn2I TCCGGA 2 cut(s) 1733, 1786
KroI GCCGGC 1 cut(s) 131
KroNI GCCGGC 1 cut(s) 133
Kzo9I GATC 7 cut(s) 21, 166, 309, 411, 488, 1512, 1928
LmnI GCTCC 7 cut(s) 103, 357, 484, 859, 921, 1042, 1909
Lsp1109I GCAGC 8 cut(s) 161, 512, 564, 635, 936, 1284, 1465, 1563
LweI GCATC 8 cut(s) 201, 484, 576, 949, 978, 1176, 1284, 1711
MabI ACCWGGT 1 cut(s) 51
MaeI CTAG 4 cut(s) 1164, 1316, 1829, 1923
MaeII ACGT 5 cut(s) 342, 873, 977, 1335, 1659
MaeIII GTNAC 1 cut(s) 1884
MalI GATC 7 cut(s) 23, 168, 311, 413, 490, 1514, 1930
MboI GATC 7 cut(s) 21, 166, 309, 411, 488, 1512, 1928
MboII GAAGA 3 cut(s) 268, 595, 1033
MfeI CAATTG 3 cut(s) 41, 633, 1880
MflI RGATCY 1 cut(s) 21
MhlI GDGCHC 3 cut(s) 108, 429, 1234
MlsI TGGCCA 1 cut(s) 1059
MluCI AATT 5 cut(s) 41, 633, 1345, 1648, 1880
MluI ACGCGT 2 cut(s) 185, 271
MluNI TGGCCA 1 cut(s) 1059
MlyI GAGTC 8 cut(s) 369, 696, 841, 1040, 1066, 1292, 1475, 1877
MmeI TCCRAC 4 cut(s) 399, 444, 1136, 1509
Mox20I TGGCCA 1 cut(s) 1059
MroI TCCGGA 2 cut(s) 1733, 1786
MroNI GCCGGC 1 cut(s) 131
MscI TGGCCA 1 cut(s) 1059
Msp20I TGGCCA 1 cut(s) 1059
MspA1I CMGCKG 2 cut(s) 294, 577
MspI CCGG 6 cut(s) 132, 258, 1158, 1734, 1787, 1889
MspR9I CCNGG 7 cut(s) 26, 53, 146, 628, 737, 751, 1159
MunI CAATTG 3 cut(s) 41, 633, 1880
Mva1269I GAATGC 2 cut(s) 1261, 1396
MvaI CCWGG 6 cut(s) 26, 53, 146, 628, 737, 751
MvnI CGCG 6 cut(s) 154, 187, 273, 384, 683, 1552
NaeI GCCGGC 1 cut(s) 133
NciI CCSGG 1 cut(s) 1159
NdeII GATC 7 cut(s) 21, 166, 309, 411, 488, 1512, 1928
NgoMIV GCCGGC 1 cut(s) 131
NheI GCTAGC 1 cut(s) 1163
NlaIII CATG 7 cut(s) 103, 268, 730, 919, 1058, 1148, 1641
NlaIV GGNNCC 6 cut(s) 353, 570, 654, 1038, 1191, 1696
NmeAIII GCCGAG 1 cut(s) 275
NsbI TGCGCA 1 cut(s) 804
NspI RCATGY 1 cut(s) 1641
PaeI GCATGC 1 cut(s) 1641
PcsI WCGNNNNNNNCGW 5 cut(s) 171, 384, 420, 905, 1191
PctI GAATGC 2 cut(s) 1261, 1396
PdiI GCCGGC 1 cut(s) 133
Ple19I CGATCG 3 cut(s) 414, 491, 1515
PleI GAGTC 8 cut(s) 368, 695, 840, 1040, 1066, 1291, 1475, 1876
PpsI GAGTC 8 cut(s) 368, 695, 840, 1040, 1066, 1291, 1475, 1876
Ppu21I YACGTR 1 cut(s) 1660
PpuMI RGGWCCY 2 cut(s) 652, 1189
Psp124BI GAGCTC 1 cut(s) 108
Psp5II RGGWCCY 2 cut(s) 652, 1189
Psp6I CCWGG 6 cut(s) 24, 51, 144, 626, 735, 749
PspFI CCCAGC 2 cut(s) 290, 1688
PspGI CCWGG 6 cut(s) 24, 51, 144, 626, 735, 749
PspN4I GGNNCC 6 cut(s) 353, 570, 654, 1038, 1191, 1696
PspPI GGNCC 5 cut(s) 49, 226, 652, 1189, 1562
PspPPI RGGWCCY 2 cut(s) 652, 1189
PsrI GAACNNNNNNTAC 4 cut(s) 1488, 1520, 1869, 1901
PstNI CAGNNNCTG 2 cut(s) 1382, 1459
PsuI RGATCY 1 cut(s) 21
PvuI CGATCG 3 cut(s) 414, 491, 1515
RsaI GTAC 4 cut(s) 539, 872, 1184, 1818
RsaNI GTAC 4 cut(s) 538, 871, 1183, 1817
SacI GAGCTC 1 cut(s) 108
SalI GTCGAC 1 cut(s) 1837
Sau3AI GATC 7 cut(s) 21, 166, 309, 411, 488, 1512, 1928
Sau96I GGNCC 5 cut(s) 49, 226, 652, 1189, 1562
SchI GAGTC 8 cut(s) 369, 696, 841, 1040, 1066, 1292, 1475, 1877
ScrFI CCNGG 7 cut(s) 26, 53, 146, 628, 737, 751, 1159
SduI GDGCHC 3 cut(s) 108, 429, 1234
SexAI ACCWGGT 1 cut(s) 51
SfaNI GCATC 8 cut(s) 201, 484, 576, 949, 978, 1176, 1284, 1711
SinI GGWCC 3 cut(s) 49, 652, 1189
SmlI CTYRAG 1 cut(s) 1399
SmoI CTYRAG 1 cut(s) 1399
SphI GCATGC 1 cut(s) 1641
Sse9I AATT 5 cut(s) 41, 633, 1345, 1648, 1880
SspMI CTAG 4 cut(s) 1164, 1316, 1829, 1923
SstI GAGCTC 1 cut(s) 108
StyD4I CCNGG 7 cut(s) 24, 51, 144, 626, 735, 749, 1157
StyI CCWWGG 3 cut(s) 1060, 1200, 1248
TaaI ACNGT 3 cut(s) 1236, 1500, 1670
TaiI ACGT 5 cut(s) 345, 876, 980, 1338, 1662
TaqII GACCGA 2 cut(s) 134, 302
TasI AATT 5 cut(s) 41, 633, 1345, 1648, 1880
TauI GCSGC 6 cut(s) 8, 68, 297, 500, 1226, 1613
TscAI CASTG 9 cut(s) 475, 702, 1239, 1365, 1383, 1629, 1648, 1673, 1782
TseI GCWGC 8 cut(s) 149, 500, 577, 623, 924, 1272, 1453, 1576
TspDTI ATGAA 6 cut(s) 743, 1034, 1088, 1226, 1546, 1599
TspGWI ACGGA 3 cut(s) 221, 1295, 1737
TspRI CASTG 9 cut(s) 475, 702, 1239, 1365, 1383, 1629, 1648, 1673, 1782
VpaK11BI GGWCC 3 cut(s) 49, 652, 1189
XagI CCTNNNNNAGG 2 cut(s) 143, 221
XapI RAATTY 2 cut(s) 1345, 1648
XbaI TCTAGA 1 cut(s) 1922
XceI RCATGY 1 cut(s) 1641
XcmI CCANNNNNNNNNTGG 1 cut(s) 1360
XmiI GTMKAC 1 cut(s) 1838
XspI CTAG 4 cut(s) 1164, 1316, 1829, 1923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.