MD10G1121400.v1.1

Armadillo/beta-catenin-like repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0015849
Physical Location & Seq
Forward (+)
19821875 .. 19823821
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1121400.v1.1.491

Sequence Viewer

Length: 1947 bp
ATGGCGGCGATTGTGAAAGAGATCCTGGCAAGGCCAATACAATTGGCAGACCAGGTGAGCAAGGCCGCCGACGAGGCACAATCTAACAAACAAGAGTGCATGGAGCTTAAATCCAAGACTGAGAAGCTCGCTGGCCTCCTCCGCCAGGCAGCGCGTGCGAGCAATGATCTCTACGAGCGCCCCACGCGTCGCATCATCGACGAAACCGAACAAGCCCTCGACAAGGCCCTCACCCTCGTCATCAAGTGCCGAGCCACCGGCCTTATGAAACGTGTATTCACCATCATCCCCAGCGGCGCCTTCAAAAAGATCGGTCAGCTACTCGACAACCACATTGGCGACGTGTCATGGCTCCTCCAAGTCTCAGCCCCTGCCGACGACCGTGATGATGAGTATCTAGGGCTCCCCCCGATCGCCTCTAATGAACCGATCCTCTGCCTTATCTGGGAACAGATTGCGATCCTCTACACTGGCTCGATGGAGAAGCGATCTGATGCGGCAGCTTCTTTGGTGTCGTTGGCGAGAGACAACGACAGGTACGGGAGGCTGATCATTGAGGAAGGCGGGGTGCCTCCGCTGCTGAAGGTGGCGAAGGAAGGAGGAAAGGAAGGGCAGGAGAGCGCCGCCAGGGCAATTGGGTTGTTGGGAAAGGACCCCGAAAGCGTCGAGCAGATTGTGAACGCCGGCGTCTGCCCAGTGTTTGCGAAAATCCTCAAAGAAGGCCACATGAAAGTCCAGGCGCTCGTTGCTTGGGCGGTCTCCGAATTGGCGGAGAATCATCCGAAATGCCAAGACCCTTTTGCGCAAAACAATGTCATCCGATTGCTCGTAAGTCATCTCGCTTTCGAGACGATTCAGGAGCACAGCAAGTACACTATCCCCAGCAAGGAACAAATGTCGTTGCACTCGATTGTGATGGCGAGCAACAACAACACGGAGCATCAGACGGTACACCCGATAACTGGGAATCAAAACATGTTTAGTCAGATACAGAATGTTGTGAAAAGCACAATGGCTACGAACAATCAGGGTCCGGCTCCCCCCGGCTCTGGTCATGCCCAGGGGAAGCCAACTCAAAATAACAATCACCAGAACCTTCATCATCAGCCTCCGAGTCACCACATCGCAAGACCGCACAATCACCACGTGGCGCTGTCAGGGGCCAGCATCAAGGGGAGGGAGTACGAGGACCCCGAAACCAAGGCGGAGATGAAGGCAATGGCGGCGAGGGCGCTGTGGAAACTTGCCAAGGGGAATGCGAGTGTTTGTGGTAGCATCACGGAGTCAAGAGCGCTTTTGTGTTTCGCGGTTTTGCTAGAAACAGGTTCTTGGGAAGTTCAGCAGAATTCGGCCAATGCGCTTATGGAGATCACCGCGGTGGCAGAGCAGAATGCGGACTTGAGGCGGTCGGCCTTCAAGCCGACATCACCCGCCTGCAAAGCAGTGGTCGAGCAGCTGCTGAAAATAATCAAAAAGGCAGACTCCGACCTGCTTGAACCGTGCATCCAAGCGATCGGAAACTTAGCAAGAACTTTCAGAGCGACGGAGACGCGATTCATTGGGCCATTGGTGAAGCTGCTCGACGAAACAGAACTGAATATCTCTACAGCGGCTGTGATTGCACTGAACAAGTTTGCATGCACTGAGAATTTCCTCCACGTAAATCACTGCAAAGCGATTATAGAAGCTGGGGGAACCAAGCATCTAATTCAACTGGTTTATTTTGGGGAATCCAGGGTGCAGATTCCGTCATTGACTCTGCTGTGCTACATTGCGCTGCATATTCCGGACAGCGAGACGCTTGCTCAGGAGGAGGTGCTGATTGTGCTAGAGTGGTCGATAAAGCAGGCTCATCTGGCGAATGAACCGTCAGTCGAAGAATTATTACCGGAAGCTAAAAGTAGGCTGGAGCTTTATCAGTCTAGAGGATCAAGAGGATTTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm

Protein Analysis

649

Amino Acids

71.08

Weight (kDa)

6.44

Isoelectric Point (pI)

41.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7792 PF25055 6 - 122 4.6e-50 Domain of unknown function (DUF7792)
ARM_ARMC5 PF24768 186 - 339 5.3e-06 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015849)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34940
fragaria_vesca FvH4_2g01590
malus_domestica MD05G1118400.v1.1 MD10G1121400.v1.1
prunus_persica Prupe.8G162900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0244271
rosa_laevigata RLG00000015369
rosa_multiflora Rmu_sc0006898.1_g000016
rosa_roxburghii Rroxscaffold_7G00215890
rosa_rugosa Rorug05G0507900
rosa_samantha Rh6AG022900 Rh6BG018700 Rh6CG015900 Rh6DG017100
rosa_wichuraiana Rw6G001900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 804
Acc36I ACCTGC 1 cut(s) 1497
AccB1I GGYRCC 2 cut(s) 296, 568
AccII CGCG 5 cut(s) 154, 187, 1307, 1376, 1552
AccIII TCCGGA 1 cut(s) 1786
AclWI GGATC 4 cut(s) 16, 424, 454, 1936
AcoI YGGCCR 1 cut(s) 1350
AcsI RAATTY 2 cut(s) 1345, 1648
AcuI CTGAAG 1 cut(s) 602
AcvI CACGTG 1 cut(s) 1147
AcyI GRCGYC 2 cut(s) 297, 687
AdeI CACNNNGTG 1 cut(s) 1147
AfaI GTAC 4 cut(s) 539, 872, 951, 1184
AfeI AGCGCT 1 cut(s) 1293
AfiI CCNNNNNNNGG 6 cut(s) 145, 223, 445, 886, 962, 1049
AflIII ACRYGT 4 cut(s) 185, 271, 342, 975
AgsI TTSAA 4 cut(s) 304, 1417, 1496, 1712
AjiI CACGTC 1 cut(s) 343
AjnI CCWGG 7 cut(s) 24, 51, 144, 626, 735, 1059, 1733
AleI CACNNNNGTG 1 cut(s) 1376
AloI GAACNNNNNNTCC 2 cut(s) 1488, 1520
AluBI AGCT 9 cut(s) 106, 127, 319, 503, 1456, 1576, 1688, 1895, 1912
AluI AGCT 9 cut(s) 106, 127, 319, 503, 1456, 1576, 1688, 1895, 1912
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 6 cut(s) 367, 519, 763, 842, 1541, 1790
AlwI GGATC 4 cut(s) 16, 424, 454, 1936
AlwNI CAGNNNCTG 3 cut(s) 371, 1459, 1613
Aor13HI TCCGGA 1 cut(s) 1786
Aor51HI AGCGCT 1 cut(s) 1293
ApeKI GCWGC 7 cut(s) 149, 500, 577, 1453, 1456, 1576, 1777
ApoI RAATTY 2 cut(s) 1345, 1648
ArsI GACNNNNNNTTYG 4 cut(s) 1431, 1463, 1853, 1885
AspS9I GGNCC 6 cut(s) 226, 652, 1031, 1161, 1189, 1562
AsuC2I CCSGG 1 cut(s) 1044
AsuHPI GGTGA 9 cut(s) 67, 223, 271, 1079, 1109, 1133, 1363, 1419, 1582
AvaII GGWCC 3 cut(s) 652, 1031, 1189
BanI GGYRCC 2 cut(s) 296, 568
BanII GRGCYC 1 cut(s) 405
BarI GAAGNNNNNNTAC 2 cut(s) 1869, 1901
BbrPI CACGTG 1 cut(s) 1147
Bbv12I GWGCWC 1 cut(s) 864
BbvI GCAGC 7 cut(s) 161, 512, 564, 1443, 1465, 1563, 1764
BccI CCATC 3 cut(s) 290, 472, 910
BcgI CGANNNNNNTGC 2 cut(s) 1784, 1818
BciT130I CCWGG 7 cut(s) 26, 53, 146, 628, 737, 1061, 1735
BclI TGATCA 1 cut(s) 549
BcnI CCSGG 1 cut(s) 1044
BcoDI GTCTC 6 cut(s) 367, 519, 763, 842, 1541, 1790
BfaI CTAG 4 cut(s) 398, 1316, 1829, 1923
BfmI CTRYAG 1 cut(s) 1605
BfoI RGCGCY 7 cut(s) 181, 300, 624, 743, 1154, 1235, 1295
BfuAI ACCTGC 1 cut(s) 1497
BglI GCCNNNNNGGC 2 cut(s) 74, 629
Bme1390I CCNGG 8 cut(s) 26, 53, 146, 628, 737, 1044, 1061, 1735
Bme18I GGWCC 3 cut(s) 652, 1031, 1189
BmgBI CACGTC 1 cut(s) 343
BmgT120I GGNCC 6 cut(s) 226, 652, 1031, 1161, 1189, 1562
BmrFI CCNGG 8 cut(s) 26, 53, 146, 628, 737, 1044, 1061, 1735
BmrI ACTGGG 2 cut(s) 689, 972
BmsI GCATC 7 cut(s) 201, 484, 949, 1176, 1284, 1512, 1711
BmuI ACTGGG 2 cut(s) 689, 972
BpmI CTGGAG 1 cut(s) 1928
Bpu10I CCTNAGC 1 cut(s) 1806
BpuEI CTTGAG 1 cut(s) 1420
BpuMI CCSGG 1 cut(s) 1044
BsaAI YACGTR 2 cut(s) 1147, 1660
BsaBI GATNNNNATC 2 cut(s) 393, 458
BsaHI GRCGYC 2 cut(s) 297, 687
BsaI GGTCTC 1 cut(s) 763
BsaJI CCNNGG 8 cut(s) 627, 1042, 1059, 1060, 1200, 1248, 1374, 1734
BsaWI WCCGGW 2 cut(s) 1786, 1888
Bsc4I CCNNNNNNNGG 6 cut(s) 145, 223, 445, 886, 962, 1049
Bse118I RCCGGY 2 cut(s) 257, 683
Bse1I ACTGG 4 cut(s) 475, 695, 967, 1719
Bse3DI GCAATG 3 cut(s) 169, 1224, 1770
Bse8I GATNNNNATC 2 cut(s) 393, 458
BseAI TCCGGA 1 cut(s) 1786
BseBI CCWGG 7 cut(s) 26, 53, 146, 628, 737, 1061, 1735
BseDI CCNNGG 8 cut(s) 627, 1042, 1059, 1060, 1200, 1248, 1374, 1734
BseGI GGATG 4 cut(s) 285, 778, 816, 1503
BseJI GATNNNNATC 2 cut(s) 393, 458
BseLI CCNNNNNNNGG 6 cut(s) 145, 223, 445, 886, 962, 1049
BseMI GCAATG 3 cut(s) 169, 1224, 1770
BseMII CTCAG 4 cut(s) 111, 378, 1635, 1820
BseNI ACTGG 4 cut(s) 475, 695, 967, 1719
BseRI GAGGAG 3 cut(s) 128, 344, 1826
BseXI GCAGC 7 cut(s) 161, 512, 564, 1443, 1465, 1563, 1764
BseYI CCCAGC 3 cut(s) 290, 881, 1688
BsgI GTGCAG 1 cut(s) 1760
Bsh1236I CGCG 5 cut(s) 154, 187, 1307, 1376, 1552
Bsh1285I CGRYCG 4 cut(s) 382, 414, 1409, 1515
BshNI GGYRCC 2 cut(s) 296, 568
BsiEI CGRYCG 4 cut(s) 382, 414, 1409, 1515
BsiHKAI GWGCWC 1 cut(s) 864
BsiSI CCGG 6 cut(s) 258, 684, 1034, 1044, 1787, 1889
BslI CCNNNNNNNGG 6 cut(s) 145, 223, 445, 886, 962, 1049
BsmAI GTCTC 6 cut(s) 367, 519, 763, 842, 1541, 1790
BsmBI CGTCTC 3 cut(s) 842, 1541, 1790
BsmI GAATGC 2 cut(s) 1261, 1396
Bso31I GGTCTC 1 cut(s) 763
Bsp1286I GDGCHC 2 cut(s) 405, 864
Bsp13I TCCGGA 1 cut(s) 1786
BspCNI CTCAG 4 cut(s) 112, 377, 1636, 1819
BspEI TCCGGA 1 cut(s) 1786
BspFNI CGCG 5 cut(s) 154, 187, 1307, 1376, 1552
BspMI ACCTGC 1 cut(s) 1497
BspPI GGATC 4 cut(s) 16, 424, 454, 1936
BspT107I GGYRCC 2 cut(s) 296, 568
BspTNI GGTCTC 1 cut(s) 763
BsrDI GCAATG 3 cut(s) 169, 1224, 1770
BsrFI RCCGGY 2 cut(s) 257, 683
BsrI ACTGG 4 cut(s) 475, 695, 967, 1719
BssAI RCCGGY 2 cut(s) 257, 683
BssECI CCNNGG 8 cut(s) 627, 1042, 1059, 1060, 1200, 1248, 1374, 1734
BssNI GRCGYC 2 cut(s) 297, 687
BssT1I CCWWGG 2 cut(s) 1200, 1248
Bst2UI CCWGG 7 cut(s) 26, 53, 146, 628, 737, 1061, 1735
Bst4CI ACNGT 4 cut(s) 383, 949, 1500, 1869
BstACI GRCGYC 2 cut(s) 297, 687
BstAPI GCANNNNNTGC 1 cut(s) 155
BstBAI YACGTR 2 cut(s) 1147, 1660
BstDEI CTNAG 5 cut(s) 120, 364, 1522, 1644, 1806
BstDSI CCRYGG 1 cut(s) 1374
BstENI CCTNNNNNAGG 2 cut(s) 143, 221
BstF5I GGATG 4 cut(s) 285, 778, 816, 1503
BstFNI CGCG 5 cut(s) 154, 187, 1307, 1376, 1552
BstH2I RGCGCY 7 cut(s) 181, 300, 624, 743, 1154, 1235, 1295
BstMAI GTCTC 6 cut(s) 367, 519, 763, 842, 1541, 1790
BstMCI CGRYCG 4 cut(s) 382, 414, 1409, 1515
BstNI CCWGG 7 cut(s) 26, 53, 146, 628, 737, 1061, 1735
BstNSI RCATGY 2 cut(s) 979, 1641
BstSCI CCNGG 8 cut(s) 24, 51, 144, 626, 735, 1042, 1059, 1733
BstSFI CTRYAG 1 cut(s) 1605
BstUI CGCG 5 cut(s) 154, 187, 1307, 1376, 1552
BstV1I GCAGC 7 cut(s) 161, 512, 564, 1443, 1465, 1563, 1764
BstX2I RGATCY 1 cut(s) 21
BstYI RGATCY 1 cut(s) 21
BtgI CCRYGG 1 cut(s) 1374
BtgZI GCGATG 1 cut(s) 1108
BtrI CACGTC 1 cut(s) 343
BtsCI GGATG 4 cut(s) 285, 778, 816, 1503
BtsI GCAGTG 2 cut(s) 1449, 1666
BtsIMutI CAGTG 6 cut(s) 468, 702, 1449, 1622, 1641, 1666
BveI ACCTGC 1 cut(s) 1497
CaiI CAGNNNCTG 3 cut(s) 371, 1459, 1613
Cfr10I RCCGGY 2 cut(s) 257, 683
Cfr13I GGNCC 6 cut(s) 226, 652, 1031, 1161, 1189, 1562
Cfr42I CCGCGG 1 cut(s) 1377
CseI GACGC 5 cut(s) 176, 652, 676, 1558, 1807
CsiI ACCWGGT 1 cut(s) 51
Csp6I GTAC 4 cut(s) 538, 871, 950, 1183
CviAII CATG 6 cut(s) 100, 348, 727, 976, 1055, 1638
CviQI GTAC 4 cut(s) 538, 871, 950, 1183
DdeI CTNAG 5 cut(s) 120, 364, 1522, 1644, 1806
DinI GGCGCC 1 cut(s) 298
DraIII CACNNNGTG 1 cut(s) 1147
EaeI YGGCCR 1 cut(s) 1350
EciI GGCGGA 3 cut(s) 131, 785, 1220
Eco130I CCWWGG 2 cut(s) 1200, 1248
Eco24I GRGCYC 1 cut(s) 405
Eco31I GGTCTC 1 cut(s) 763
Eco47I GGWCC 3 cut(s) 652, 1031, 1189
Eco47III AGCGCT 1 cut(s) 1293
Eco57I CTGAAG 1 cut(s) 602
Eco72I CACGTG 1 cut(s) 1147
EcoNI CCTNNNNNAGG 2 cut(s) 143, 221
EcoO109I RGGNCCY 3 cut(s) 226, 652, 1189
EcoRI GAATTC 1 cut(s) 1345
EcoRII CCWGG 7 cut(s) 24, 51, 144, 626, 735, 1059, 1733
EcoT14I CCWWGG 2 cut(s) 1200, 1248
EcoT38I GRGCYC 1 cut(s) 405
EgeI GGCGCC 1 cut(s) 298
EheI GGCGCC 1 cut(s) 298
ErhI CCWWGG 2 cut(s) 1200, 1248
Esp3I CGTCTC 3 cut(s) 842, 1541, 1790
FaeI CATG 6 cut(s) 103, 351, 730, 979, 1058, 1641
FatI CATG 6 cut(s) 99, 347, 726, 975, 1054, 1637
FauI CCCGC 2 cut(s) 557, 1438
FbaI TGATCA 1 cut(s) 549
FokI GGATG 4 cut(s) 272, 765, 803, 1490
FriOI GRGCYC 1 cut(s) 405
FspBI CTAG 4 cut(s) 398, 1316, 1829, 1923
FspI TGCGCA 1 cut(s) 804
GsaI CCCAGC 3 cut(s) 294, 885, 1692
GsuI CTGGAG 1 cut(s) 1928
HaeII RGCGCY 7 cut(s) 181, 300, 624, 743, 1154, 1235, 1295
HapII CCGG 6 cut(s) 258, 684, 1034, 1044, 1787, 1889
HgaI GACGC 5 cut(s) 176, 652, 676, 1558, 1807
Hin1I GRCGYC 2 cut(s) 297, 687
Hin1II CATG 6 cut(s) 103, 351, 730, 979, 1058, 1641
HpaII CCGG 6 cut(s) 258, 684, 1034, 1044, 1787, 1889
HphI GGTGA 9 cut(s) 67, 223, 271, 1079, 1109, 1133, 1363, 1419, 1582
Hpy166II GTNNAC 3 cut(s) 679, 873, 952
Hpy188III TCNNGA 7 cut(s) 847, 857, 1287, 1787, 1808, 1923, 1932
Hpy8I GTNNAC 3 cut(s) 679, 873, 952
Hpy99I CGWCG 8 cut(s) 74, 192, 203, 344, 380, 668, 1546, 1586
HpyCH4III ACNGT 4 cut(s) 383, 949, 1500, 1869
HpyCH4IV ACGT 4 cut(s) 271, 342, 1146, 1659
HpyF3I CTNAG 5 cut(s) 120, 364, 1522, 1644, 1806
HpySE526I ACGT 4 cut(s) 271, 342, 1146, 1659
Hsp92I GRCGYC 2 cut(s) 297, 687
Hsp92II CATG 6 cut(s) 103, 351, 730, 979, 1058, 1641
KasI GGCGCC 1 cut(s) 296
Kpn2I TCCGGA 1 cut(s) 1786
KroI GCCGGC 1 cut(s) 683
KroNI GCCGGC 1 cut(s) 685
Ksp22I TGATCA 1 cut(s) 549
KspI CCGCGG 1 cut(s) 1377
LmnI GCTCC 7 cut(s) 103, 357, 408, 859, 937, 1042, 1909
Lsp1109I GCAGC 7 cut(s) 161, 512, 564, 1443, 1465, 1563, 1764
LweI GCATC 7 cut(s) 201, 484, 949, 1176, 1284, 1512, 1711
MabI ACCWGGT 1 cut(s) 51
MaeI CTAG 4 cut(s) 398, 1316, 1829, 1923
MaeII ACGT 4 cut(s) 271, 342, 1146, 1659
MaeIII GTNAC 1 cut(s) 1115
MboII GAAGA 1 cut(s) 1889
MfeI CAATTG 2 cut(s) 41, 633
MflI RGATCY 1 cut(s) 21
MhlI GDGCHC 2 cut(s) 405, 864
MluCI AATT 7 cut(s) 41, 633, 764, 1345, 1648, 1707, 1880
MluI ACGCGT 1 cut(s) 185
Mly113I GGCGCC 1 cut(s) 297
MlyI GAGTC 4 cut(s) 1123, 1292, 1475, 1750
MmeI TCCRAC 1 cut(s) 1509
MreI CGCCGGCG 1 cut(s) 683
MroI TCCGGA 1 cut(s) 1786
MroNI GCCGGC 1 cut(s) 683
MseI TTAA 1 cut(s) 108
MslI CAYNNNNRTG 1 cut(s) 1376
MspA1I CMGCKG 5 cut(s) 294, 577, 1376, 1456, 1610
MspI CCGG 6 cut(s) 258, 684, 1034, 1044, 1787, 1889
MspR9I CCNGG 8 cut(s) 26, 53, 146, 628, 737, 1044, 1061, 1735
MunI CAATTG 2 cut(s) 41, 633
Mva1269I GAATGC 2 cut(s) 1261, 1396
MvaI CCWGG 7 cut(s) 26, 53, 146, 628, 737, 1061, 1735
MvnI CGCG 5 cut(s) 154, 187, 1307, 1376, 1552
NaeI GCCGGC 1 cut(s) 685
NarI GGCGCC 1 cut(s) 297
NciI CCSGG 1 cut(s) 1044
NgoMIV GCCGGC 1 cut(s) 683
NlaIII CATG 6 cut(s) 103, 351, 730, 979, 1058, 1641
NmeAIII GCCGAG 1 cut(s) 275
NmuCI GTSAC 1 cut(s) 1115
NsbI TGCGCA 1 cut(s) 804
NspI RCATGY 2 cut(s) 979, 1641
OliI CACNNNNGTG 1 cut(s) 1376
PaeI GCATGC 1 cut(s) 1641
PasI CCCWGGG 1 cut(s) 1060
PciI ACATGT 1 cut(s) 975
PcsI WCGNNNNNNNCGW 4 cut(s) 204, 905, 953, 1191
PctI GAATGC 2 cut(s) 1261, 1396
PdiI GCCGGC 1 cut(s) 685
PfeI GAWTC 6 cut(s) 775, 853, 967, 1554, 1730, 1744
Ple19I CGATCG 2 cut(s) 414, 1515
PleI GAGTC 4 cut(s) 1122, 1291, 1475, 1750
PluTI GGCGCC 1 cut(s) 300
PmaCI CACGTG 1 cut(s) 1147
PmlI CACGTG 1 cut(s) 1147
PpsI GAGTC 4 cut(s) 1122, 1291, 1475, 1750
Ppu21I YACGTR 2 cut(s) 1147, 1660
PpuMI RGGWCCY 2 cut(s) 652, 1189
PscI ACATGT 1 cut(s) 975
Psp5II RGGWCCY 2 cut(s) 652, 1189
Psp6I CCWGG 7 cut(s) 24, 51, 144, 626, 735, 1059, 1733
PspCI CACGTG 1 cut(s) 1147
PspFI CCCAGC 3 cut(s) 290, 881, 1688
PspGI CCWGG 7 cut(s) 24, 51, 144, 626, 735, 1059, 1733
PspPI GGNCC 6 cut(s) 226, 652, 1031, 1161, 1189, 1562
PspPPI RGGWCCY 2 cut(s) 652, 1189
PstNI CAGNNNCTG 3 cut(s) 371, 1459, 1613
PsuI RGATCY 1 cut(s) 21
PvuI CGATCG 2 cut(s) 414, 1515
PvuII CAGCTG 1 cut(s) 1456
RsaI GTAC 4 cut(s) 539, 872, 951, 1184
RsaNI GTAC 4 cut(s) 538, 871, 950, 1183
RseI CAYNNNNRTG 1 cut(s) 1376
SacII CCGCGG 1 cut(s) 1377
SaqAI TTAA 1 cut(s) 108
Sau96I GGNCC 6 cut(s) 226, 652, 1031, 1161, 1189, 1562
SchI GAGTC 4 cut(s) 1123, 1292, 1475, 1750
ScrFI CCNGG 8 cut(s) 26, 53, 146, 628, 737, 1044, 1061, 1735
SduI GDGCHC 2 cut(s) 405, 864
SexAI ACCWGGT 1 cut(s) 51
SfaNI GCATC 7 cut(s) 201, 484, 949, 1176, 1284, 1512, 1711
SfcI CTRYAG 1 cut(s) 1605
SfoI GGCGCC 1 cut(s) 298
Sfr303I CCGCGG 1 cut(s) 1377
SgrAI CRCCGGYG 1 cut(s) 683
SgrBI CCGCGG 1 cut(s) 1377
SinI GGWCC 3 cut(s) 652, 1031, 1189
SmiMI CAYNNNNRTG 1 cut(s) 1376
SmlI CTYRAG 1 cut(s) 1399
SmoI CTYRAG 1 cut(s) 1399
SphI GCATGC 1 cut(s) 1641
Sse9I AATT 7 cut(s) 41, 633, 764, 1345, 1648, 1707, 1880
SspDI GGCGCC 1 cut(s) 296
SspMI CTAG 4 cut(s) 398, 1316, 1829, 1923
StyD4I CCNGG 8 cut(s) 24, 51, 144, 626, 735, 1042, 1059, 1733
StyI CCWWGG 2 cut(s) 1200, 1248
TaaI ACNGT 4 cut(s) 383, 949, 1500, 1869
TaiI ACGT 4 cut(s) 274, 345, 1149, 1662
TaqII GACCGA 1 cut(s) 302
TasI AATT 7 cut(s) 41, 633, 764, 1345, 1648, 1707, 1880
TatI WGTACW 1 cut(s) 870
TauI GCSGC 7 cut(s) 8, 68, 297, 500, 626, 1226, 1613
TfiI GAWTC 6 cut(s) 775, 853, 967, 1554, 1730, 1744
Tru1I TTAA 1 cut(s) 108
Tru9I TTAA 1 cut(s) 108
TscAI CASTG 6 cut(s) 475, 702, 1449, 1629, 1648, 1673
TseFI GTSAC 1 cut(s) 1115
TseI GCWGC 7 cut(s) 149, 500, 577, 1453, 1456, 1576, 1777
Tsp45I GTSAC 1 cut(s) 1115
TspDTI ATGAA 7 cut(s) 281, 438, 743, 1088, 1226, 1546, 1878
TspGWI ACGGA 4 cut(s) 950, 1295, 1559, 1737
TspRI CASTG 6 cut(s) 475, 702, 1449, 1629, 1648, 1673
VpaK11BI GGWCC 3 cut(s) 652, 1031, 1189
XagI CCTNNNNNAGG 2 cut(s) 143, 221
XapI RAATTY 2 cut(s) 1345, 1648
XbaI TCTAGA 1 cut(s) 1922
XceI RCATGY 2 cut(s) 979, 1641
XcmI CCANNNNNNNNNTGG 1 cut(s) 1360
XspI CTAG 4 cut(s) 398, 1316, 1829, 1923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.