RLG00000015369

Armadillo/beta-catenin-like repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0015849
Physical Location & Seq
Forward (+)
65101692 .. 65104218
2527 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015369

Sequence Viewer

Length: 2040 bp
ATGCCCCATAACTCCTCCTCCCTCTGTCGGCGGCGCCACCCATCACAGCCACCGCTTGTTCCACAACCACCACCCTTTTCTGTTTCGGCGTCAATGGCGGCAATTGTGAAGGAGATCCTGGCCCGGCCGATCCAGCTGGCCGACCAAGTCACCAAAGCCGCCGACGAGGCACAGTCTTTCCGACAAGACTGCATGGAGCTCAAATCCAAAACGGAGAAGCTCGCCGGCCTCCTACGCCAGGCCGCGCGTGCGAGCAACGACCTCTACGAGCGTCCGACACGTCGCATCATCGACGACACCGAGCAAGTCCTCGACAAGGCCCTCGCTCTCGTCATCAAGTGCCGCGCCAACGGCATCATGAAGCGCGTATTCACCATCATTCCAGCCACGGCGTTCCGAAAGACGTCGCAGCAGCTCGAGAATTCCATCGGCGACGTGTCGTGGCTGCTCCGAGTCTCGGCCCCCTCCGACGATCGAGACGACGAGTACCTCGGCCTGCCGCCGATCGCCACCAACGAGCCAATCCTCTGCGTCATTTGGGAGCAGATAGCTATTCTTTACACCGGCTCGTTGGAGGAGCGCTCGGATGCGGCAGCCTCTCTGGTCTCATTGGCCAGAGACAATGACAGATACGGAAAGCTTATCATCGAGGAAGGTGGGGTCCCACCGCTGTTGAAGGTAGCTAAGGAAGGGGGAAACAAGGAGGGCCAAGAAAATGCAGCTCGTGCGATCGGCTTACTAGGCCGAGACCCTGAGAGTGTGGAGCAGATTGTGCAATCTGGGGTTTGCCCGGTGTTTGCGAAAATACTCAAAGATGGTCATATGAAGATTCAGGCAGTTGTGGCCTGGGCGGTTTCGGAACTAGCAGAGCACCATCCCAAATGCCAGGATCCGTTTGCGCAGAACAATGTGATAAGAATGCTGGTTAGTCATCTCGCGTTCGAGACCATCCAGGAACATAGCAAGTATGCAATCGCTAGTAAGCAGAACATGTCGCTTCATTCGATTGTGATGGGGAATAATAGTAACAGGCTCGATATGGTTGAGCATAGTTCTTCTGGTCATGTTCCGCATCCGATAACAGGGAATCATCAGGTATCTAATCAGATGCAGAATTTGGTGCAGACTCTGGCAAAGAATAAGCCAACTAATGCTGGAGGGGGAGCAGCTCACAATCATCACCATCATCCTAATGCGCAGGGCAATGCAAAGCCGCACCACCACGGTCAAAACCCAGCTAATGTTTTGTCCGGGAATAGCCTTAAGGGGAGGGAGTACGAAGACCCGGTTACCAAGGCTGAGATGAAGGCAATGGCGGCAAGGGCGCTTTGGAAGCTTGCTAAGGGGAATGTCACCGTCTGCCATAGCATCACAGAGTCAAGGGCGCTTTTGTGCTTTGCGGTTTTGATAGAAAAGGGTACCGAGGATGTTAAGAGGTATTCGGCTTATGCGTTGGCGGAAATCACCGCGGTAGCAGAGCAGAATTCGGACTTGAGGCGCAATGCCTTCAAGCCTACTTCCCCTGCTGCCAAGGCTGTGCTGGAACAATTGTTGAGAATCATAGAAAAGGCGGATGATGAGCTTCTTATACCTTGCGTACAGTCTATTGGGAACTTGGCAAGGACTTTTCGAGCAACAGAAACAAGGCTAATCGGGCCATTGGTGAAGCTGCTTGACGAAAGAGAACCAGAGGTTTCTGTTGAGGCTGTGGTTGCACTCATCAAGTTTGCATGCACCGACAATTTTCTCCATGTCAATCACTGTAAAGCAATTACAGATGCAGGAGGAACCAAGCATCTAATTCAGCTGGTTTACTTTGGAGAACAAATGTTGCAGATTCCTTCATTAGTTCTTTTATGTTACATTGCCATGCATATTCCAGATAGTGAGACTCTTGCTCAGGAAGAAGTGCTTATTGTGCTGGAATGGTCAACAAAGCAGGCTCATCTTGCTAATGAACCATCAATTGAACCATTATTACCAGAAGCCAAAAGTAGGTTGGAGCTTTACCAATCTAGAGGTTCAAGAGGATTTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm

Protein Analysis

680

Amino Acids

74.69

Weight (kDa)

6.82

Isoelectric Point (pI)

45.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7792 PF25055 37 - 153 9.3e-54 Domain of unknown function (DUF7792)
ARM_ARMC5 PF24768 216 - 320 4.9e-06 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015849)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34940
fragaria_vesca FvH4_2g01590
malus_domestica MD05G1118400.v1.1 MD10G1121400.v1.1
prunus_persica Prupe.8G162900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0244271
rosa_laevigata RLG00000015369
rosa_multiflora Rmu_sc0006898.1_g000016
rosa_roxburghii Rroxscaffold_7G00215890
rosa_rugosa Rorug05G0507900
rosa_samantha Rh6AG022900 Rh6BG018700 Rh6CG015900 Rh6DG017100
rosa_wichuraiana Rw6G001900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 407
Acc16I TGCGCA 2 cut(s) 900, 1197
Acc65I GGTACC 1 cut(s) 1418
AccB1I GGYRCC 2 cut(s) 33, 1418
AccII CGCG 6 cut(s) 245, 247, 345, 366, 938, 1469
AclWI GGATC 4 cut(s) 109, 124, 884, 897
AcoI YGGCCR 3 cut(s) 125, 138, 612
AcsI RAATTY 3 cut(s) 421, 1114, 1483
AcyI GRCGYC 3 cut(s) 34, 89, 404
AfaI GTAC 4 cut(s) 488, 1277, 1420, 1599
AfeI AGCGCT 1 cut(s) 581
AfiI CCNNNNNNNGG 6 cut(s) 27, 238, 316, 457, 1082, 1995
AflII CTTAAG 1 cut(s) 1262
AflIII ACRYGT 3 cut(s) 278, 435, 990
AgsI TTSAA 4 cut(s) 676, 1510, 1970, 2025
AjiI CACGTC 2 cut(s) 281, 436
AjnI CCWGG 5 cut(s) 117, 237, 845, 885, 951
Alw21I GWGCWC 2 cut(s) 201, 873
Alw26I GTCTC 7 cut(s) 460, 471, 610, 612, 741, 938, 1883
AlwI GGATC 4 cut(s) 109, 124, 884, 897
AlwNI CAGNNNCTG 1 cut(s) 1129
Ama87I CYCGRG 1 cut(s) 416
Aor51HI AGCGCT 1 cut(s) 581
ApeKI GCWGC 8 cut(s) 409, 412, 445, 593, 719, 1166, 1526, 1669
ApoI RAATTY 3 cut(s) 421, 1114, 1483
Asp718I GGTACC 1 cut(s) 1418
AspS9I GGNCC 6 cut(s) 121, 319, 460, 661, 706, 1655
AsuC2I CCSGG 4 cut(s) 124, 791, 1252, 1286
AsuHPI GGTGA 6 cut(s) 142, 364, 1172, 1345, 1456, 1675
AvaI CYCGRG 1 cut(s) 416
AvaII GGWCC 1 cut(s) 661
BalI TGGCCA 1 cut(s) 614
BamHI GGATCC 1 cut(s) 889
BanI GGYRCC 2 cut(s) 33, 1418
BanII GRGCYC 1 cut(s) 201
BauI CACGAG 1 cut(s) 723
BbsI GAAGAC 1 cut(s) 1287
Bbv12I GWGCWC 2 cut(s) 201, 873
BbvI GCAGC 8 cut(s) 421, 424, 432, 605, 731, 1178, 1513, 1656
BccI CCATC 9 cut(s) 49, 383, 434, 809, 882, 956, 1006, 1191, 1969
BceAI ACGGC 2 cut(s) 367, 405
BcgI CGANNNNNNTGC 2 cut(s) 171, 205
BciT130I CCWGG 5 cut(s) 119, 239, 847, 887, 953
BcnI CCSGG 4 cut(s) 124, 791, 1252, 1286
BcoDI GTCTC 7 cut(s) 460, 471, 610, 612, 741, 938, 1883
BfaI CTAG 4 cut(s) 740, 863, 978, 2016
BfoI RGCGCY 4 cut(s) 37, 583, 1328, 1388
BfrI CTTAAG 1 cut(s) 1262
BglI GCCNNNNNGGC 1 cut(s) 167
Bme1390I CCNGG 9 cut(s) 119, 124, 239, 791, 847, 887, 953, 1252, 1286
Bme18I GGWCC 1 cut(s) 661
BmeT110I CYCGRG 1 cut(s) 416
BmgBI CACGTC 2 cut(s) 281, 436
BmgT120I GGNCC 6 cut(s) 121, 319, 460, 661, 706, 1655
BmiI GGNNCC 7 cut(s) 35, 462, 662, 663, 891, 1420, 1789
BmrFI CCNGG 9 cut(s) 119, 124, 239, 791, 847, 887, 953, 1252, 1286
BmsI GCATC 8 cut(s) 294, 363, 577, 1081, 1098, 1377, 1768, 1804
BpiI GAAGAC 1 cut(s) 1287
BplI GAGNNNNNCTC 2 cut(s) 566, 598
BpmI CTGGAG 1 cut(s) 1176
Bpu10I CCTNAGC 3 cut(s) 684, 1341, 1899
BpuEI CTTGAG 1 cut(s) 1513
BpuMI CCSGG 4 cut(s) 124, 791, 1252, 1286
BsaHI GRCGYC 3 cut(s) 34, 89, 404
BsaI GGTCTC 3 cut(s) 610, 741, 938
BsaJI CCNNGG 8 cut(s) 387, 490, 846, 1222, 1293, 1422, 1467, 1530
BsaXI ACNNNNNCTCC 1 cut(s) 32
Bsc4I CCNNNNNNNGG 6 cut(s) 27, 238, 316, 457, 1082, 1995
Bse118I RCCGGY 2 cut(s) 224, 563
Bse3DI GCAATG 4 cut(s) 1210, 1317, 1507, 1863
BseBI CCWGG 5 cut(s) 119, 239, 847, 887, 953
BseDI CCNNGG 8 cut(s) 387, 490, 846, 1222, 1293, 1422, 1467, 1530
BseGI GGATG 7 cut(s) 592, 874, 948, 1072, 1186, 1432, 1579
BseLI CCNNNNNNNGG 6 cut(s) 27, 238, 316, 457, 1082, 1995
BseMI GCAATG 4 cut(s) 1210, 1317, 1507, 1863
BseMII CTCAG 3 cut(s) 744, 1290, 1913
BseRI GAGGAG 3 cut(s) 4, 7, 590
BseX3I CGGCCG 1 cut(s) 125
BseXI GCAGC 8 cut(s) 421, 424, 432, 605, 731, 1178, 1513, 1656
BseYI CCCAGC 1 cut(s) 1234
BsgI GTGCAG 1 cut(s) 1142
Bsh1236I CGCG 6 cut(s) 245, 247, 345, 366, 938, 1469
Bsh1285I CGRYCG 4 cut(s) 128, 475, 507, 732
BshNI GGYRCC 2 cut(s) 33, 1418
BsiEI CGRYCG 4 cut(s) 128, 475, 507, 732
BsiHKAI GWGCWC 2 cut(s) 201, 873
BsiHKCI CYCGRG 1 cut(s) 416
BsiSI CCGG 6 cut(s) 124, 225, 564, 791, 1251, 1286
BslFI GGGAC 1 cut(s) 647
BslI CCNNNNNNNGG 6 cut(s) 27, 238, 316, 457, 1082, 1995
BsmAI GTCTC 7 cut(s) 460, 471, 610, 612, 741, 938, 1883
BsmBI CGTCTC 1 cut(s) 471
BsmFI GGGAC 1 cut(s) 647
BsmI GAATGC 1 cut(s) 924
Bso31I GGTCTC 3 cut(s) 610, 741, 938
BsoBI CYCGRG 1 cut(s) 416
Bsp1286I GDGCHC 2 cut(s) 201, 873
Bsp143I GATC 6 cut(s) 114, 129, 472, 504, 729, 889
BspCNI CTCAG 3 cut(s) 745, 1291, 1912
BspFNI CGCG 6 cut(s) 245, 247, 345, 366, 938, 1469
BspHI TCATGA 1 cut(s) 357
BspLI GGNNCC 7 cut(s) 35, 462, 662, 663, 891, 1420, 1789
BspPI GGATC 4 cut(s) 109, 124, 884, 897
BspT107I GGYRCC 2 cut(s) 33, 1418
BspTI CTTAAG 1 cut(s) 1262
BspTNI GGTCTC 3 cut(s) 610, 741, 938
BsrDI GCAATG 4 cut(s) 1210, 1317, 1507, 1863
BsrFI RCCGGY 2 cut(s) 224, 563
BssAI RCCGGY 2 cut(s) 224, 563
BssECI CCNNGG 8 cut(s) 387, 490, 846, 1222, 1293, 1422, 1467, 1530
BssMI GATC 6 cut(s) 114, 129, 472, 504, 729, 889
BssNI GRCGYC 3 cut(s) 34, 89, 404
BssSI CACGAG 1 cut(s) 723
BssT1I CCWWGG 2 cut(s) 1293, 1530
Bst2BI CACGAG 1 cut(s) 723
Bst2UI CCWGG 5 cut(s) 119, 239, 847, 887, 953
Bst4CI ACNGT 5 cut(s) 174, 1226, 1357, 1602, 1763
BstACI GRCGYC 3 cut(s) 34, 89, 404
BstAFI CTTAAG 1 cut(s) 1262
BstAPI GCANNNNNTGC 2 cut(s) 725, 772
BstC8I GCNNGC 9 cut(s) 138, 222, 226, 249, 253, 497, 1338, 1732, 1941
BstDEI CTNAG 5 cut(s) 684, 753, 1299, 1341, 1899
BstDSI CCRYGG 3 cut(s) 387, 1222, 1467
BstEII GGTNACC 1 cut(s) 1288
BstENI CCTNNNNNAGG 2 cut(s) 236, 314
BstF5I GGATG 7 cut(s) 592, 874, 948, 1072, 1186, 1432, 1579
BstFNI CGCG 6 cut(s) 245, 247, 345, 366, 938, 1469
BstH2I RGCGCY 4 cut(s) 37, 583, 1328, 1388
BstKTI GATC 6 cut(s) 117, 132, 475, 507, 732, 892
BstMAI GTCTC 7 cut(s) 460, 471, 610, 612, 741, 938, 1883
BstMBI GATC 6 cut(s) 114, 129, 472, 504, 729, 889
BstMCI CGRYCG 4 cut(s) 128, 475, 507, 732
BstNI CCWGG 5 cut(s) 119, 239, 847, 887, 953
BstNSI RCATGY 2 cut(s) 994, 1734
BstPI GGTNACC 1 cut(s) 1288
BstSCI CCNGG 9 cut(s) 117, 122, 237, 789, 845, 885, 951, 1250, 1284
BstUI CGCG 6 cut(s) 245, 247, 345, 366, 938, 1469
BstV1I GCAGC 8 cut(s) 421, 424, 432, 605, 731, 1178, 1513, 1656
BstV2I GAAGAC 1 cut(s) 1287
BstX2I RGATCY 2 cut(s) 114, 889
BstYI RGATCY 2 cut(s) 114, 889
BstZI CGGCCG 1 cut(s) 125
BtgI CCRYGG 3 cut(s) 387, 1222, 1467
BtrI CACGTC 2 cut(s) 281, 436
BtsCI GGATG 7 cut(s) 592, 874, 948, 1072, 1186, 1432, 1579
BtsIMutI CAGTG 1 cut(s) 1759
Cac8I GCNNGC 9 cut(s) 138, 222, 226, 249, 253, 497, 1338, 1732, 1941
CaiI CAGNNNCTG 1 cut(s) 1129
CciI TCATGA 1 cut(s) 357
Cfr10I RCCGGY 2 cut(s) 224, 563
Cfr13I GGNCC 6 cut(s) 121, 319, 460, 661, 706, 1655
Cfr42I CCGCGG 1 cut(s) 1470
CseI GACGC 3 cut(s) 78, 260, 520
Csp6I GTAC 4 cut(s) 487, 1276, 1419, 1598
CspCI CAANNNNNGTGG 2 cut(s) 654, 689
CviAII CATG 7 cut(s) 193, 358, 991, 1064, 1731, 1751, 1870
CviQI GTAC 4 cut(s) 487, 1276, 1419, 1598
DdeI CTNAG 5 cut(s) 684, 753, 1299, 1341, 1899
DinI GGCGCC 1 cut(s) 35
DpnI GATC 6 cut(s) 116, 131, 474, 506, 731, 891
DpnII GATC 6 cut(s) 114, 129, 472, 504, 729, 889
EaeI YGGCCR 3 cut(s) 125, 138, 612
EagI CGGCCG 1 cut(s) 125
EciI GGCGGA 2 cut(s) 1472, 1586
Ecl136II GAGCTC 1 cut(s) 199
EclXI CGGCCG 1 cut(s) 125
Eco130I CCWWGG 2 cut(s) 1293, 1530
Eco24I GRGCYC 1 cut(s) 201
Eco31I GGTCTC 3 cut(s) 610, 741, 938
Eco47I GGWCC 1 cut(s) 661
Eco47III AGCGCT 1 cut(s) 581
Eco52I CGGCCG 1 cut(s) 125
Eco53kI GAGCTC 1 cut(s) 199
Eco88I CYCGRG 1 cut(s) 416
Eco91I GGTNACC 1 cut(s) 1288
EcoICRI GAGCTC 1 cut(s) 199
EcoNI CCTNNNNNAGG 2 cut(s) 236, 314
EcoO109I RGGNCCY 2 cut(s) 319, 661
EcoO65I GGTNACC 1 cut(s) 1288
EcoRI GAATTC 2 cut(s) 421, 1483
EcoRII CCWGG 5 cut(s) 117, 237, 845, 885, 951
EcoT14I CCWWGG 2 cut(s) 1293, 1530
EcoT22I ATGCAT 1 cut(s) 1875
EcoT38I GRGCYC 1 cut(s) 201
EgeI GGCGCC 1 cut(s) 35
EheI GGCGCC 1 cut(s) 35
ErhI CCWWGG 2 cut(s) 1293, 1530
Esp3I CGTCTC 1 cut(s) 471
FaeI CATG 7 cut(s) 196, 361, 994, 1067, 1734, 1754, 1873
FalI AAGNNNNNCTT 2 cut(s) 1896, 1928
FaqI GGGAC 1 cut(s) 647
FatI CATG 7 cut(s) 192, 357, 990, 1063, 1730, 1750, 1869
FauNDI CATATG 1 cut(s) 822
FokI GGATG 7 cut(s) 599, 861, 935, 1059, 1173, 1439, 1586
FriOI GRGCYC 1 cut(s) 201
FspBI CTAG 4 cut(s) 740, 863, 978, 2016
FspI TGCGCA 2 cut(s) 900, 1197
GsaI CCCAGC 1 cut(s) 1238
GsuI CTGGAG 1 cut(s) 1176
HaeII RGCGCY 4 cut(s) 37, 583, 1328, 1388
HapII CCGG 6 cut(s) 124, 225, 564, 791, 1251, 1286
HgaI GACGC 3 cut(s) 78, 260, 520
Hin1I GRCGYC 3 cut(s) 34, 89, 404
Hin1II CATG 7 cut(s) 196, 361, 994, 1067, 1734, 1754, 1873
HincII GTYRAC 1 cut(s) 1932
HindII GTYRAC 1 cut(s) 1932
HindIII AAGCTT 2 cut(s) 638, 1334
HinfI GANTC 8 cut(s) 453, 829, 1087, 1126, 1376, 1557, 1837, 1891
HpaII CCGG 6 cut(s) 124, 225, 564, 791, 1251, 1286
HphI GGTGA 6 cut(s) 142, 364, 1172, 1345, 1456, 1675
Hpy166II GTNNAC 2 cut(s) 1813, 1932
Hpy188III TCNNGA 8 cut(s) 358, 418, 476, 943, 1880, 1901, 2016, 2025
Hpy8I GTNNAC 2 cut(s) 1813, 1932
Hpy99I CGWCG 7 cut(s) 167, 285, 296, 409, 437, 473, 485
HpyAV CCTTC 7 cut(s) 103, 647, 670, 683, 1300, 1516, 1851
HpyCH4III ACNGT 5 cut(s) 174, 1226, 1357, 1602, 1763
HpyCH4IV ACGT 3 cut(s) 280, 404, 435
HpyF3I CTNAG 5 cut(s) 684, 753, 1299, 1341, 1899
HpySE526I ACGT 3 cut(s) 280, 404, 435
Hsp92I GRCGYC 3 cut(s) 34, 89, 404
Hsp92II CATG 7 cut(s) 196, 361, 994, 1067, 1734, 1754, 1873
KasI GGCGCC 1 cut(s) 33
KflI GGGWCCC 1 cut(s) 661
KpnI GGTACC 1 cut(s) 1422
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
KspI CCGCGG 1 cut(s) 1470
Kzo9I GATC 6 cut(s) 114, 129, 472, 504, 729, 889
LmnI GCTCC 7 cut(s) 196, 453, 541, 577, 763, 1163, 2002
Lsp1109I GCAGC 8 cut(s) 421, 424, 432, 605, 731, 1178, 1513, 1656
LweI GCATC 8 cut(s) 294, 363, 577, 1081, 1098, 1377, 1768, 1804
MaeI CTAG 4 cut(s) 740, 863, 978, 2016
MaeII ACGT 3 cut(s) 280, 404, 435
MaeIII GTNAC 5 cut(s) 148, 1025, 1288, 1351, 1859
MalI GATC 6 cut(s) 116, 131, 474, 506, 731, 891
MboI GATC 6 cut(s) 114, 129, 472, 504, 729, 889
MboII GAAGA 4 cut(s) 838, 1047, 1292, 1916
MfeI CAATTG 3 cut(s) 102, 1547, 1965
MflI RGATCY 2 cut(s) 114, 889
MhlI GDGCHC 2 cut(s) 201, 873
MlsI TGGCCA 1 cut(s) 614
MluCI AATT 9 cut(s) 102, 421, 1114, 1483, 1547, 1741, 1770, 1800, 1965
MluNI TGGCCA 1 cut(s) 614
Mly113I GGCGCC 1 cut(s) 34
MlyI GAGTC 4 cut(s) 462, 1120, 1385, 1885
MmeI TCCRAC 5 cut(s) 205, 299, 492, 552, 1980
Mox20I TGGCCA 1 cut(s) 614
Mph1103I ATGCAT 1 cut(s) 1875
MroNI GCCGGC 1 cut(s) 224
MscI TGGCCA 1 cut(s) 614
MseI TTAA 2 cut(s) 1263, 1431
MslI CAYNNNNRTG 2 cut(s) 1191, 1868
Msp20I TGGCCA 1 cut(s) 614
MspA1I CMGCKG 4 cut(s) 136, 670, 1469, 1807
MspCI CTTAAG 1 cut(s) 1262
MspI CCGG 6 cut(s) 124, 225, 564, 791, 1251, 1286
MspR9I CCNGG 9 cut(s) 119, 124, 239, 791, 847, 887, 953, 1252, 1286
MunI CAATTG 3 cut(s) 102, 1547, 1965
Mva1269I GAATGC 1 cut(s) 924
MvaI CCWGG 5 cut(s) 119, 239, 847, 887, 953
MvnI CGCG 6 cut(s) 245, 247, 345, 366, 938, 1469
NaeI GCCGGC 1 cut(s) 226
NarI GGCGCC 1 cut(s) 34
NciI CCSGG 4 cut(s) 124, 791, 1252, 1286
NdeI CATATG 1 cut(s) 822
NdeII GATC 6 cut(s) 114, 129, 472, 504, 729, 889
NgoMIV GCCGGC 1 cut(s) 224
NlaIII CATG 7 cut(s) 196, 361, 994, 1067, 1734, 1754, 1873
NlaIV GGNNCC 7 cut(s) 35, 462, 662, 663, 891, 1420, 1789
NmeAIII GCCGAG 3 cut(s) 437, 471, 770
NmuCI GTSAC 2 cut(s) 148, 1351
NsbI TGCGCA 2 cut(s) 900, 1197
NsiI ATGCAT 1 cut(s) 1875
NspI RCATGY 2 cut(s) 994, 1734
PaeI GCATGC 1 cut(s) 1734
PaeR7I CTCGAG 1 cut(s) 416
PagI TCATGA 1 cut(s) 357
PciI ACATGT 1 cut(s) 990
PcsI WCGNNNNNNNCGW 6 cut(s) 264, 297, 477, 513, 1001, 1448
PctI GAATGC 1 cut(s) 924
PdiI GCCGGC 1 cut(s) 226
PfeI GAWTC 4 cut(s) 829, 1087, 1557, 1837
PflFI GACNNNGTC 1 cut(s) 146
PfoI TCCNGGA 2 cut(s) 951, 1250
Ple19I CGATCG 3 cut(s) 475, 507, 732
PleI GAGTC 4 cut(s) 461, 1120, 1384, 1885
PluTI GGCGCC 1 cut(s) 37
PpsI GAGTC 4 cut(s) 461, 1120, 1384, 1885
PpuMI RGGWCCY 1 cut(s) 661
PscI ACATGT 1 cut(s) 990
Psp124BI GAGCTC 1 cut(s) 201
Psp5II RGGWCCY 1 cut(s) 661
Psp6I CCWGG 5 cut(s) 117, 237, 845, 885, 951
PspEI GGTNACC 1 cut(s) 1288
PspFI CCCAGC 1 cut(s) 1234
PspGI CCWGG 5 cut(s) 117, 237, 845, 885, 951
PspN4I GGNNCC 7 cut(s) 35, 462, 662, 663, 891, 1420, 1789
PspPI GGNCC 6 cut(s) 121, 319, 460, 661, 706, 1655
PspPPI RGGWCCY 1 cut(s) 661
PsrI GAACNNNNNNTAC 2 cut(s) 1962, 1994
PstNI CAGNNNCTG 1 cut(s) 1129
PsuI RGATCY 2 cut(s) 114, 889
PsyI GACNNNGTC 1 cut(s) 146
PvuI CGATCG 3 cut(s) 475, 507, 732
PvuII CAGCTG 2 cut(s) 136, 1807
RsaI GTAC 4 cut(s) 488, 1277, 1420, 1599
RsaNI GTAC 4 cut(s) 487, 1276, 1419, 1598
RseI CAYNNNNRTG 2 cut(s) 1191, 1868
SacI GAGCTC 1 cut(s) 201
SacII CCGCGG 1 cut(s) 1470
SaqAI TTAA 2 cut(s) 1263, 1431
Sau3AI GATC 6 cut(s) 114, 129, 472, 504, 729, 889
Sau96I GGNCC 6 cut(s) 121, 319, 460, 661, 706, 1655
SchI GAGTC 4 cut(s) 462, 1120, 1385, 1885
ScrFI CCNGG 9 cut(s) 119, 124, 239, 791, 847, 887, 953, 1252, 1286
SduI GDGCHC 2 cut(s) 201, 873
SfaNI GCATC 8 cut(s) 294, 363, 577, 1081, 1098, 1377, 1768, 1804
SfoI GGCGCC 1 cut(s) 35
Sfr274I CTCGAG 1 cut(s) 416
Sfr303I CCGCGG 1 cut(s) 1470
SgrBI CCGCGG 1 cut(s) 1470
SinI GGWCC 1 cut(s) 661
SlaI CTCGAG 1 cut(s) 416
SmiMI CAYNNNNRTG 2 cut(s) 1191, 1868
SmlI CTYRAG 3 cut(s) 416, 1262, 1492
SmoI CTYRAG 3 cut(s) 416, 1262, 1492
SphI GCATGC 1 cut(s) 1734
Sse9I AATT 9 cut(s) 102, 421, 1114, 1483, 1547, 1741, 1770, 1800, 1965
SspDI GGCGCC 1 cut(s) 33
SspMI CTAG 4 cut(s) 740, 863, 978, 2016
SstI GAGCTC 1 cut(s) 201
StyD4I CCNGG 9 cut(s) 117, 122, 237, 789, 845, 885, 951, 1250, 1284
StyI CCWWGG 2 cut(s) 1293, 1530
TaaI ACNGT 5 cut(s) 174, 1226, 1357, 1602, 1763
TaiI ACGT 3 cut(s) 283, 407, 438
TaqI TCGA 9 cut(s) 291, 312, 417, 475, 648, 942, 1004, 1035, 1630
TasI AATT 9 cut(s) 102, 421, 1114, 1483, 1547, 1741, 1770, 1800, 1965
TauI GCSGC 9 cut(s) 34, 101, 161, 245, 345, 502, 593, 1216, 1319
TfiI GAWTC 4 cut(s) 829, 1087, 1557, 1837
Tru1I TTAA 2 cut(s) 1263, 1431
Tru9I TTAA 2 cut(s) 1263, 1431
TscAI CASTG 1 cut(s) 1766
TseFI GTSAC 2 cut(s) 148, 1351
TseI GCWGC 8 cut(s) 409, 412, 445, 593, 719, 1166, 1526, 1669
Tsp45I GTSAC 2 cut(s) 148, 1351
TspDTI ATGAA 6 cut(s) 374, 839, 989, 1319, 1833, 1971
TspGWI ACGGA 3 cut(s) 227, 648, 882
TspRI CASTG 1 cut(s) 1766
Tth111I GACNNNGTC 1 cut(s) 146
Vha464I CTTAAG 1 cut(s) 1262
VpaK11BI GGWCC 1 cut(s) 661
XagI CCTNNNNNAGG 2 cut(s) 236, 314
XapI RAATTY 3 cut(s) 421, 1114, 1483
XbaI TCTAGA 1 cut(s) 2015
XceI RCATGY 2 cut(s) 994, 1734
XcmI CCANNNNNNNNNTGG 2 cut(s) 1537, 1996
XhoI CTCGAG 1 cut(s) 416
XspI CTAG 4 cut(s) 740, 863, 978, 2016
ZraI GACGTC 1 cut(s) 405
Zsp2I ATGCAT 1 cut(s) 1875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.