Domain of unknown function (DUF4408)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34560 |
| fragaria_vesca | FvH4_2g09200 |
| malus_domestica | MD05G1064000.v1.1 MD10G1072700.v1.1 |
| prunus_persica | Prupe.6G200500_v2.0.a1 Prupe.8G094100_v2.0.a1 |
| pyrus_communis | pycom10g05740 |
| rosa_chinensis | RchiOBHm_Chr6g0265051 |
| rosa_laevigata | RLG00000014213 |
| rosa_roxburghii | Rroxscaffold_175G00432120 Rroxscaffold_7G00203000 |
| rosa_rugosa | Rorug06G0013400 |
| rosa_samantha | Rh6AG136400 Rh6BG133400 Rh6CG131800 Rh6DG119100 |
| rosa_wichuraiana | Rw6G011770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 57 |
| AccB1I | GGYRCC | 1 cut(s) | 57 |
| AccII | CGCG | 1 cut(s) | 483 |
| AciI | CCGC | 1 cut(s) | 61 |
| AcsI | RAATTY | 1 cut(s) | 472 |
| AfaI | GTAC | 2 cut(s) | 59, 377 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 54 |
| AgsI | TTSAA | 2 cut(s) | 288, 538 |
| AjnI | CCWGG | 2 cut(s) | 128, 641 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 567, 599 |
| AluBI | AGCT | 4 cut(s) | 32, 67, 278, 296 |
| AluI | AGCT | 4 cut(s) | 32, 67, 278, 296 |
| Alw21I | GWGCWC | 1 cut(s) | 395 |
| Alw26I | GTCTC | 2 cut(s) | 177, 518 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 578 |
| ApeKI | GCWGC | 2 cut(s) | 618, 646 |
| ApoI | RAATTY | 1 cut(s) | 472 |
| Asp718I | GGTACC | 1 cut(s) | 57 |
| AsuHPI | GGTGA | 1 cut(s) | 320 |
| BanI | GGYRCC | 1 cut(s) | 57 |
| BbsI | GAAGAC | 1 cut(s) | 44 |
| Bbv12I | GWGCWC | 1 cut(s) | 395 |
| BbvI | GCAGC | 2 cut(s) | 605, 658 |
| BccI | CCATC | 1 cut(s) | 395 |
| BceAI | ACGGC | 1 cut(s) | 489 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 638, 672 |
| BciT130I | CCWGG | 2 cut(s) | 130, 643 |
| BcoDI | GTCTC | 2 cut(s) | 177, 518 |
| BfaI | CTAG | 2 cut(s) | 98, 456 |
| BisI | GCNGC | 2 cut(s) | 619, 647 |
| BlsI | GCNGC | 2 cut(s) | 620, 648 |
| Bme1390I | CCNGG | 2 cut(s) | 130, 643 |
| BmiI | GGNNCC | 1 cut(s) | 59 |
| BmrFI | CCNGG | 2 cut(s) | 130, 643 |
| BpiI | GAAGAC | 1 cut(s) | 44 |
| Bpu10I | CCTNAGC | 2 cut(s) | 279, 301 |
| BsaJI | CCNNGG | 1 cut(s) | 435 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 54 |
| Bse3DI | GCAATG | 1 cut(s) | 636 |
| BseBI | CCWGG | 2 cut(s) | 130, 643 |
| BseDI | CCNNGG | 1 cut(s) | 435 |
| BseGI | GGATG | 1 cut(s) | 246 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 54 |
| BseMI | GCAATG | 1 cut(s) | 636 |
| BseMII | CTCAG | 3 cut(s) | 24, 288, 315 |
| BseRI | GAGGAG | 1 cut(s) | 623 |
| BseXI | GCAGC | 2 cut(s) | 605, 658 |
| BsgI | GTGCAG | 1 cut(s) | 402 |
| Bsh1236I | CGCG | 1 cut(s) | 483 |
| BshNI | GGYRCC | 1 cut(s) | 57 |
| BsiHKAI | GWGCWC | 1 cut(s) | 395 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 54 |
| BsmAI | GTCTC | 2 cut(s) | 177, 518 |
| BsmBI | CGTCTC | 1 cut(s) | 518 |
| Bsp1286I | GDGCHC | 1 cut(s) | 395 |
| Bsp143I | GATC | 3 cut(s) | 9, 592, 681 |
| BspACI | CCGC | 1 cut(s) | 61 |
| BspCNI | CTCAG | 3 cut(s) | 25, 287, 314 |
| BspFNI | CGCG | 1 cut(s) | 483 |
| BspLI | GGNNCC | 1 cut(s) | 59 |
| BspT107I | GGYRCC | 1 cut(s) | 57 |
| BsrDI | GCAATG | 1 cut(s) | 636 |
| BssECI | CCNNGG | 1 cut(s) | 435 |
| BssMI | GATC | 3 cut(s) | 9, 592, 681 |
| BssT1I | CCWWGG | 1 cut(s) | 435 |
| Bst2UI | CCWGG | 2 cut(s) | 130, 643 |
| Bst4CI | ACNGT | 2 cut(s) | 338, 375 |
| BstC8I | GCNNGC | 3 cut(s) | 65, 298, 490 |
| BstDEI | CTNAG | 5 cut(s) | 33, 68, 274, 279, 301 |
| BstF5I | GGATG | 1 cut(s) | 246 |
| BstFNI | CGCG | 1 cut(s) | 483 |
| BstKTI | GATC | 3 cut(s) | 12, 595, 684 |
| BstMAI | GTCTC | 2 cut(s) | 177, 518 |
| BstMBI | GATC | 3 cut(s) | 9, 592, 681 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 139, 297, 489, 638 |
| BstNI | CCWGG | 2 cut(s) | 130, 643 |
| BstSCI | CCNGG | 2 cut(s) | 128, 641 |
| BstUI | CGCG | 1 cut(s) | 483 |
| BstV1I | GCAGC | 2 cut(s) | 605, 658 |
| BstV2I | GAAGAC | 1 cut(s) | 44 |
| BtsCI | GGATG | 1 cut(s) | 246 |
| BtsIMutI | CAGTG | 1 cut(s) | 343 |
| Cac8I | GCNNGC | 3 cut(s) | 65, 298, 490 |
| CaiI | CAGNNNCTG | 1 cut(s) | 578 |
| Csp6I | GTAC | 2 cut(s) | 58, 376 |
| CviAII | CATG | 1 cut(s) | 598 |
| CviQI | GTAC | 2 cut(s) | 58, 376 |
| DdeI | CTNAG | 5 cut(s) | 33, 68, 274, 279, 301 |
| DpnI | GATC | 3 cut(s) | 11, 594, 683 |
| DpnII | GATC | 3 cut(s) | 9, 592, 681 |
| Eco130I | CCWWGG | 1 cut(s) | 435 |
| EcoRII | CCWGG | 2 cut(s) | 128, 641 |
| EcoT14I | CCWWGG | 1 cut(s) | 435 |
| ErhI | CCWWGG | 1 cut(s) | 435 |
| Esp3I | CGTCTC | 1 cut(s) | 518 |
| FaeI | CATG | 1 cut(s) | 601 |
| FaiI | YATR | 9 cut(s) | 21, 50, 188, 239, 397, 399, 410, 429, 599 |
| FatI | CATG | 1 cut(s) | 597 |
| FauNDI | CATATG | 1 cut(s) | 397 |
| Fnu4HI | GCNGC | 2 cut(s) | 619, 647 |
| FokI | GGATG | 1 cut(s) | 233 |
| Fsp4HI | GCNGC | 2 cut(s) | 619, 647 |
| FspBI | CTAG | 2 cut(s) | 98, 456 |
| GluI | GCNGC | 2 cut(s) | 619, 647 |
| Hin1II | CATG | 1 cut(s) | 601 |
| HinfI | GANTC | 5 cut(s) | 5, 284, 346, 355, 460 |
| HphI | GGTGA | 1 cut(s) | 320 |
| Hpy188I | TCNGA | 7 cut(s) | 182, 333, 351, 390, 469, 523, 556 |
| Hpy188III | TCNNGA | 3 cut(s) | 160, 303, 538 |
| Hpy99I | CGWCG | 1 cut(s) | 227 |
| HpyCH4III | ACNGT | 2 cut(s) | 338, 375 |
| HpyCH4V | TGCA | 4 cut(s) | 142, 419, 621, 664 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 139, 297, 489, 638 |
| HpyF3I | CTNAG | 5 cut(s) | 33, 68, 274, 279, 301 |
| Hsp92II | CATG | 1 cut(s) | 601 |
| KpnI | GGTACC | 1 cut(s) | 61 |
| Kzo9I | GATC | 3 cut(s) | 9, 592, 681 |
| Lsp1109I | GCAGC | 2 cut(s) | 605, 658 |
| MaeI | CTAG | 2 cut(s) | 98, 456 |
| MalI | GATC | 3 cut(s) | 11, 594, 683 |
| MboI | GATC | 3 cut(s) | 9, 592, 681 |
| MboII | GAAGA | 6 cut(s) | 49, 364, 457, 574, 602, 680 |
| MhlI | GDGCHC | 1 cut(s) | 395 |
| MluCI | AATT | 3 cut(s) | 13, 472, 543 |
| MlyI | GAGTC | 1 cut(s) | 469 |
| MmeI | TCCRAC | 1 cut(s) | 208 |
| MnlI | CCTC | 8 cut(s) | 48, 219, 260, 299, 478, 507, 601, 622 |
| MspA1I | CMGCKG | 1 cut(s) | 296 |
| MspR9I | CCNGG | 2 cut(s) | 130, 643 |
| MvaI | CCWGG | 2 cut(s) | 130, 643 |
| MvnI | CGCG | 1 cut(s) | 483 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 139, 297, 489, 638 |
| NdeI | CATATG | 1 cut(s) | 397 |
| NdeII | GATC | 3 cut(s) | 9, 592, 681 |
| NlaIII | CATG | 1 cut(s) | 601 |
| NlaIV | GGNNCC | 1 cut(s) | 59 |
| NmeAIII | GCCGAG | 1 cut(s) | 386 |
| PfeI | GAWTC | 3 cut(s) | 284, 346, 355 |
| PkrI | GCNGC | 2 cut(s) | 620, 648 |
| PleI | GAGTC | 1 cut(s) | 468 |
| PpsI | GAGTC | 1 cut(s) | 468 |
| Psp6I | CCWGG | 2 cut(s) | 128, 641 |
| PspGI | CCWGG | 2 cut(s) | 128, 641 |
| PspN4I | GGNNCC | 1 cut(s) | 59 |
| PstNI | CAGNNNCTG | 1 cut(s) | 578 |
| PvuII | CAGCTG | 1 cut(s) | 296 |
| RsaI | GTAC | 2 cut(s) | 59, 377 |
| RsaNI | GTAC | 2 cut(s) | 58, 376 |
| SatI | GCNGC | 2 cut(s) | 619, 647 |
| Sau3AI | GATC | 3 cut(s) | 9, 592, 681 |
| SchI | GAGTC | 1 cut(s) | 469 |
| ScrFI | CCNGG | 2 cut(s) | 130, 643 |
| SduI | GDGCHC | 1 cut(s) | 395 |
| Sse9I | AATT | 3 cut(s) | 13, 472, 543 |
| SsiI | CCGC | 1 cut(s) | 61 |
| SspMI | CTAG | 2 cut(s) | 98, 456 |
| StyD4I | CCNGG | 2 cut(s) | 128, 641 |
| StyI | CCWWGG | 1 cut(s) | 435 |
| TaaI | ACNGT | 2 cut(s) | 338, 375 |
| TaqI | TCGA | 3 cut(s) | 8, 91, 658 |
| TasI | AATT | 3 cut(s) | 13, 472, 543 |
| TatI | WGTACW | 1 cut(s) | 375 |
| TfiI | GAWTC | 3 cut(s) | 284, 346, 355 |
| TscAI | CASTG | 1 cut(s) | 343 |
| TseI | GCWGC | 2 cut(s) | 618, 646 |
| TspDTI | ATGAA | 3 cut(s) | 381, 416, 625 |
| TspGWI | ACGGA | 1 cut(s) | 542 |
| TspRI | CASTG | 1 cut(s) | 343 |
| XapI | RAATTY | 1 cut(s) | 472 |
| XspI | CTAG | 2 cut(s) | 98, 456 |