Domain of unknown function (DUF4408)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34560 |
| fragaria_vesca | FvH4_2g09200 |
| malus_domestica | MD05G1064000.v1.1 MD10G1072700.v1.1 |
| prunus_persica | Prupe.6G200500_v2.0.a1 Prupe.8G094100_v2.0.a1 |
| pyrus_communis | pycom10g05740 |
| rosa_chinensis | RchiOBHm_Chr6g0265051 |
| rosa_laevigata | RLG00000014213 |
| rosa_roxburghii | Rroxscaffold_175G00432120 Rroxscaffold_7G00203000 |
| rosa_rugosa | Rorug06G0013400 |
| rosa_samantha | Rh6AG136400 Rh6BG133400 Rh6CG131800 Rh6DG119100 |
| rosa_wichuraiana | Rw6G011770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 3 cut(s) | 257, 483, 502 |
| AciI | CCGC | 3 cut(s) | 61, 500, 502 |
| AclI | AACGTT | 1 cut(s) | 546 |
| AcsI | RAATTY | 1 cut(s) | 472 |
| AcuI | CTGAAG | 1 cut(s) | 606 |
| AfaI | GTAC | 1 cut(s) | 377 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 590 |
| AgsI | TTSAA | 4 cut(s) | 181, 445, 514, 538 |
| AjnI | CCWGG | 3 cut(s) | 128, 378, 553 |
| AluBI | AGCT | 4 cut(s) | 67, 278, 300, 425 |
| AluI | AGCT | 4 cut(s) | 67, 278, 300, 425 |
| Alw21I | GWGCWC | 1 cut(s) | 293 |
| Alw26I | GTCTC | 1 cut(s) | 518 |
| Ama87I | CYCGRG | 1 cut(s) | 286 |
| AoxI | GGCC | 1 cut(s) | 381 |
| ApeKI | GCWGC | 2 cut(s) | 297, 643 |
| ApoI | RAATTY | 1 cut(s) | 472 |
| AspLEI | GCGC | 2 cut(s) | 365, 507 |
| AsuII | TTCGAA | 1 cut(s) | 70 |
| AvaI | CYCGRG | 1 cut(s) | 286 |
| AxyI | CCTNAGG | 1 cut(s) | 399 |
| BanII | GRGCYC | 1 cut(s) | 500 |
| BbsI | GAAGAC | 1 cut(s) | 594 |
| Bbv12I | GWGCWC | 1 cut(s) | 293 |
| BbvI | GCAGC | 2 cut(s) | 309, 655 |
| BceAI | ACGGC | 1 cut(s) | 607 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 635, 669 |
| BciT130I | CCWGG | 3 cut(s) | 130, 380, 555 |
| BciVI | GTATCC | 1 cut(s) | 591 |
| BcoDI | GTCTC | 1 cut(s) | 518 |
| BfaI | CTAG | 1 cut(s) | 682 |
| BfoI | RGCGCY | 2 cut(s) | 366, 508 |
| BfuI | GTATCC | 1 cut(s) | 591 |
| BisI | GCNGC | 3 cut(s) | 298, 503, 644 |
| BlsI | GCNGC | 3 cut(s) | 299, 504, 645 |
| Bme1390I | CCNGG | 3 cut(s) | 130, 380, 555 |
| BmeT110I | CYCGRG | 1 cut(s) | 286 |
| BmrFI | CCNGG | 3 cut(s) | 130, 380, 555 |
| BpiI | GAAGAC | 1 cut(s) | 594 |
| Bpu14I | TTCGAA | 1 cut(s) | 70 |
| BsaJI | CCNNGG | 1 cut(s) | 500 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 590 |
| Bse118I | RCCGGY | 1 cut(s) | 565 |
| Bse21I | CCTNAGG | 1 cut(s) | 399 |
| Bse3DI | GCAATG | 1 cut(s) | 633 |
| BseBI | CCWGG | 3 cut(s) | 130, 380, 555 |
| BseDI | CCNNGG | 1 cut(s) | 500 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 590 |
| BseMI | GCAATG | 1 cut(s) | 633 |
| BseMII | CTCAG | 2 cut(s) | 24, 408 |
| BseRI | GAGGAG | 2 cut(s) | 417, 620 |
| BseXI | GCAGC | 2 cut(s) | 309, 655 |
| Bsh1236I | CGCG | 3 cut(s) | 257, 483, 502 |
| Bsh1285I | CGRYCG | 1 cut(s) | 521 |
| BshFI | GGCC | 1 cut(s) | 383 |
| BsiEI | CGRYCG | 1 cut(s) | 521 |
| BsiHKAI | GWGCWC | 1 cut(s) | 293 |
| BsiHKCI | CYCGRG | 1 cut(s) | 286 |
| BsiSI | CCGG | 2 cut(s) | 192, 566 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 590 |
| BsmAI | GTCTC | 1 cut(s) | 518 |
| BsnI | GGCC | 1 cut(s) | 383 |
| BsoBI | CYCGRG | 1 cut(s) | 286 |
| Bsp119I | TTCGAA | 1 cut(s) | 70 |
| Bsp1286I | GDGCHC | 2 cut(s) | 293, 500 |
| Bsp143I | GATC | 2 cut(s) | 310, 518 |
| Bsp68I | TCGCGA | 1 cut(s) | 257 |
| BspACI | CCGC | 3 cut(s) | 61, 500, 502 |
| BspANI | GGCC | 1 cut(s) | 383 |
| BspCNI | CTCAG | 2 cut(s) | 25, 409 |
| BspFNI | CGCG | 3 cut(s) | 257, 483, 502 |
| BspT104I | TTCGAA | 1 cut(s) | 70 |
| BsrDI | GCAATG | 1 cut(s) | 633 |
| BsrFI | RCCGGY | 1 cut(s) | 565 |
| BssAI | RCCGGY | 1 cut(s) | 565 |
| BssECI | CCNNGG | 1 cut(s) | 500 |
| BssMI | GATC | 2 cut(s) | 310, 518 |
| Bst2UI | CCWGG | 3 cut(s) | 130, 380, 555 |
| Bst6I | CTCTTC | 2 cut(s) | 257, 315 |
| BstBI | TTCGAA | 1 cut(s) | 70 |
| BstC8I | GCNNGC | 5 cut(s) | 65, 108, 423, 500, 567 |
| BstDEI | CTNAG | 3 cut(s) | 33, 399, 417 |
| BstDSI | CCRYGG | 1 cut(s) | 500 |
| BstFNI | CGCG | 3 cut(s) | 257, 483, 502 |
| BstH2I | RGCGCY | 2 cut(s) | 366, 508 |
| BstHHI | GCGC | 2 cut(s) | 365, 507 |
| BstKTI | GATC | 2 cut(s) | 313, 521 |
| BstMAI | GTCTC | 1 cut(s) | 518 |
| BstMBI | GATC | 2 cut(s) | 310, 518 |
| BstMCI | CGRYCG | 1 cut(s) | 521 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 297, 303, 489, 504 |
| BstNI | CCWGG | 3 cut(s) | 130, 380, 555 |
| BstSCI | CCNGG | 3 cut(s) | 128, 378, 553 |
| BstUI | CGCG | 3 cut(s) | 257, 483, 502 |
| BstV1I | GCAGC | 2 cut(s) | 309, 655 |
| BstV2I | GAAGAC | 1 cut(s) | 594 |
| Bsu36I | CCTNAGG | 1 cut(s) | 399 |
| BsuI | GTATCC | 1 cut(s) | 591 |
| BsuRI | GGCC | 1 cut(s) | 383 |
| BtgI | CCRYGG | 1 cut(s) | 500 |
| BtgZI | GCGATG | 1 cut(s) | 321 |
| BtuMI | TCGCGA | 1 cut(s) | 257 |
| Cac8I | GCNNGC | 5 cut(s) | 65, 108, 423, 500, 567 |
| CfoI | GCGC | 2 cut(s) | 365, 507 |
| Cfr10I | RCCGGY | 1 cut(s) | 565 |
| Cfr42I | CCGCGG | 1 cut(s) | 503 |
| Csp6I | GTAC | 1 cut(s) | 376 |
| CviAII | CATG | 3 cut(s) | 152, 199, 595 |
| CviQI | GTAC | 1 cut(s) | 376 |
| DdeI | CTNAG | 3 cut(s) | 33, 399, 417 |
| DpnI | GATC | 2 cut(s) | 312, 520 |
| DpnII | GATC | 2 cut(s) | 310, 518 |
| Eam1104I | CTCTTC | 2 cut(s) | 257, 315 |
| EarI | CTCTTC | 2 cut(s) | 257, 315 |
| Eco24I | GRGCYC | 1 cut(s) | 500 |
| Eco57I | CTGAAG | 1 cut(s) | 606 |
| Eco81I | CCTNAGG | 1 cut(s) | 399 |
| Eco88I | CYCGRG | 1 cut(s) | 286 |
| EcoRII | CCWGG | 3 cut(s) | 128, 378, 553 |
| EcoT38I | GRGCYC | 1 cut(s) | 500 |
| FaeI | CATG | 3 cut(s) | 155, 202, 598 |
| FaiI | YATR | 8 cut(s) | 21, 153, 188, 200, 318, 386, 410, 596 |
| FatI | CATG | 3 cut(s) | 151, 198, 594 |
| FauI | CCCGC | 1 cut(s) | 507 |
| Fnu4HI | GCNGC | 3 cut(s) | 298, 503, 644 |
| FriOI | GRGCYC | 1 cut(s) | 500 |
| Fsp4HI | GCNGC | 3 cut(s) | 298, 503, 644 |
| FspBI | CTAG | 1 cut(s) | 682 |
| GlaI | GCGC | 2 cut(s) | 364, 506 |
| GluI | GCNGC | 3 cut(s) | 298, 503, 644 |
| HaeII | RGCGCY | 2 cut(s) | 366, 508 |
| HaeIII | GGCC | 1 cut(s) | 383 |
| HapII | CCGG | 2 cut(s) | 192, 566 |
| HhaI | GCGC | 2 cut(s) | 365, 507 |
| Hin1II | CATG | 3 cut(s) | 155, 202, 598 |
| Hin6I | GCGC | 2 cut(s) | 363, 505 |
| HinP1I | GCGC | 2 cut(s) | 363, 505 |
| HinfI | GANTC | 4 cut(s) | 5, 284, 460, 626 |
| HpaII | CCGG | 2 cut(s) | 192, 566 |
| Hpy166II | GTNNAC | 1 cut(s) | 679 |
| Hpy188I | TCNGA | 6 cut(s) | 333, 351, 418, 469, 523, 615 |
| Hpy188III | TCNNGA | 6 cut(s) | 52, 160, 256, 445, 538, 584 |
| Hpy8I | GTNNAC | 1 cut(s) | 679 |
| HpyAV | CCTTC | 2 cut(s) | 31, 659 |
| HpyCH4IV | ACGT | 1 cut(s) | 546 |
| HpyCH4V | TGCA | 4 cut(s) | 439, 492, 638, 661 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 297, 303, 489, 504 |
| HpyF3I | CTNAG | 3 cut(s) | 33, 399, 417 |
| HpySE526I | ACGT | 1 cut(s) | 546 |
| Hsp92II | CATG | 3 cut(s) | 155, 202, 598 |
| HspAI | GCGC | 2 cut(s) | 363, 505 |
| KroI | GCCGGC | 1 cut(s) | 565 |
| KroNI | GCCGGC | 1 cut(s) | 567 |
| KspI | CCGCGG | 1 cut(s) | 503 |
| Kzo9I | GATC | 2 cut(s) | 310, 518 |
| LmnI | GCTCC | 3 cut(s) | 123, 430, 615 |
| Lsp1109I | GCAGC | 2 cut(s) | 309, 655 |
| MaeI | CTAG | 1 cut(s) | 682 |
| MaeII | ACGT | 1 cut(s) | 546 |
| MaeIII | GTNAC | 1 cut(s) | 599 |
| MalI | GATC | 2 cut(s) | 312, 520 |
| MboI | GATC | 2 cut(s) | 310, 518 |
| MboII | GAAGA | 3 cut(s) | 244, 332, 599 |
| MhlI | GDGCHC | 2 cut(s) | 293, 500 |
| MluCI | AATT | 3 cut(s) | 13, 440, 472 |
| MlyI | GAGTC | 3 cut(s) | 278, 469, 635 |
| MmeI | TCCRAC | 1 cut(s) | 166 |
| MnlI | CCTC | 6 cut(s) | 94, 159, 219, 438, 478, 598 |
| MroNI | GCCGGC | 1 cut(s) | 565 |
| MspA1I | CMGCKG | 1 cut(s) | 502 |
| MspI | CCGG | 2 cut(s) | 192, 566 |
| MspR9I | CCNGG | 3 cut(s) | 130, 380, 555 |
| MvaI | CCWGG | 3 cut(s) | 130, 380, 555 |
| MvnI | CGCG | 3 cut(s) | 257, 483, 502 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 297, 303, 489, 504 |
| NaeI | GCCGGC | 1 cut(s) | 567 |
| NdeII | GATC | 2 cut(s) | 310, 518 |
| NgoMIV | GCCGGC | 1 cut(s) | 565 |
| NlaIII | CATG | 3 cut(s) | 155, 202, 598 |
| NruI | TCGCGA | 1 cut(s) | 257 |
| NspV | TTCGAA | 1 cut(s) | 70 |
| PaeR7I | CTCGAG | 1 cut(s) | 286 |
| PdiI | GCCGGC | 1 cut(s) | 567 |
| PfeI | GAWTC | 1 cut(s) | 5 |
| PkrI | GCNGC | 3 cut(s) | 299, 504, 645 |
| Ple19I | CGATCG | 1 cut(s) | 521 |
| PleI | GAGTC | 3 cut(s) | 278, 468, 634 |
| PpsI | GAGTC | 3 cut(s) | 278, 468, 634 |
| Psp1406I | AACGTT | 1 cut(s) | 546 |
| Psp6I | CCWGG | 3 cut(s) | 128, 378, 553 |
| PspGI | CCWGG | 3 cut(s) | 128, 378, 553 |
| PspXI | VCTCGAGB | 1 cut(s) | 286 |
| PvuI | CGATCG | 1 cut(s) | 521 |
| RruI | TCGCGA | 1 cut(s) | 257 |
| RsaI | GTAC | 1 cut(s) | 377 |
| RsaNI | GTAC | 1 cut(s) | 376 |
| SacII | CCGCGG | 1 cut(s) | 503 |
| SatI | GCNGC | 3 cut(s) | 298, 503, 644 |
| Sau3AI | GATC | 2 cut(s) | 310, 518 |
| SchI | GAGTC | 3 cut(s) | 278, 469, 635 |
| ScrFI | CCNGG | 3 cut(s) | 130, 380, 555 |
| SduI | GDGCHC | 2 cut(s) | 293, 500 |
| Sfr274I | CTCGAG | 1 cut(s) | 286 |
| Sfr303I | CCGCGG | 1 cut(s) | 503 |
| SfuI | TTCGAA | 1 cut(s) | 70 |
| SgrBI | CCGCGG | 1 cut(s) | 503 |
| SlaI | CTCGAG | 1 cut(s) | 286 |
| SmlI | CTYRAG | 1 cut(s) | 286 |
| SmoI | CTYRAG | 1 cut(s) | 286 |
| Sse9I | AATT | 3 cut(s) | 13, 440, 472 |
| SsiI | CCGC | 3 cut(s) | 61, 500, 502 |
| SspMI | CTAG | 1 cut(s) | 682 |
| StyD4I | CCNGG | 3 cut(s) | 128, 378, 553 |
| TaiI | ACGT | 1 cut(s) | 549 |
| TaqI | TCGA | 3 cut(s) | 70, 287, 655 |
| TasI | AATT | 3 cut(s) | 13, 440, 472 |
| TauI | GCSGC | 1 cut(s) | 505 |
| TfiI | GAWTC | 1 cut(s) | 5 |
| TseI | GCWGC | 2 cut(s) | 297, 643 |
| TspDTI | ATGAA | 3 cut(s) | 187, 333, 622 |
| XapI | RAATTY | 1 cut(s) | 472 |
| XhoI | CTCGAG | 1 cut(s) | 286 |
| XspI | CTAG | 1 cut(s) | 682 |