FvH4_2g13790

Mitotic-spindle organizing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0008654
Physical Location & Seq
Reverse (-)
12018121 .. 12018330
210 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g13790.t1

Sequence Viewer

Length: 210 bp
ATGGACGCGGATGCTGTAAAAATGGCATGGGAGTCTCTGGTTCTAGCATCTCAGATGTTGAGCATTCTTGACACAGGGCATGATCGTCACACCATTTCCATCCTCATTGCACTCTGTGATTTGGGTCTCAACCCTGAGGCTTTGGCTGCTGTTGTCAAGGAGCTCCAATATGACCTCAATGACACTTACATAAGAGGATGTTACTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000923 GO:0000930 GO:0000931 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005640 GO:0005694 GO:0005737 GO:0005815 GO:0005819 GO:0005828 GO:0005856 GO:0005874 GO:0005876 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006336 GO:0006338 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0008092 GO:0008104 GO:0008150 GO:0008274 GO:0009524 GO:0009574 GO:0009987 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0019867 GO:0022402 GO:0022607 GO:0031021 GO:0031055 GO:0031090 GO:0031109 GO:0031497 GO:0031503 GO:0031965 GO:0031967 GO:0031968 GO:0031975 GO:0032153 GO:0032155 GO:0032991 GO:0033036 GO:0033566 GO:0034080 GO:0034508 GO:0034613 GO:0034622 GO:0034629 GO:0034724 GO:0034728 GO:0042175 GO:0042393 GO:0043015 GO:0043044 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043486 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0051179 GO:0051225 GO:0051258 GO:0051276 GO:0051415 GO:0051418 GO:0051641 GO:0061641 GO:0065003 GO:0065004 GO:0070727 GO:0070925 GO:0071103 GO:0071824 GO:0071840 GO:0072686 GO:0090307 GO:0097435 GO:0098588 GO:0098687 GO:0098805 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1902850 GO:1903047
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MOZART1

Protein Analysis

70

Amino Acids

7.6

Weight (kDa)

4.37

Isoelectric Point (pI)

31.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MOZART1 PF12554 13 - 55 1.4e-14 Mitotic-spindle organizing gamma-tubulin ring associated
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 8
AciI CCGC 1 cut(s) 8
AdeI CACNNNGTG 1 cut(s) 116
AluBI AGCT 1 cut(s) 163
AluI AGCT 1 cut(s) 163
Alw21I GWGCWC 1 cut(s) 165
Alw26I GTCTC 2 cut(s) 39, 131
ApeKI GCWGC 1 cut(s) 146
AxyI CCTNAGG 1 cut(s) 135
BanII GRGCYC 1 cut(s) 165
Bbv12I GWGCWC 1 cut(s) 165
BbvI GCAGC 1 cut(s) 133
BccI CCATC 1 cut(s) 107
BcoDI GTCTC 2 cut(s) 39, 131
BfaI CTAG 1 cut(s) 44
BisI GCNGC 1 cut(s) 147
BlsI GCNGC 1 cut(s) 148
BmsI GCATC 1 cut(s) 56
BsaI GGTCTC 1 cut(s) 131
Bse21I CCTNAGG 1 cut(s) 135
Bse3DI GCAATG 1 cut(s) 105
BseGI GGATG 3 cut(s) 16, 99, 203
BseMI GCAATG 1 cut(s) 105
BseMII CTCAG 2 cut(s) 65, 126
BseXI GCAGC 1 cut(s) 133
Bsh1236I CGCG 1 cut(s) 8
BsiHKAI GWGCWC 1 cut(s) 165
BsmAI GTCTC 2 cut(s) 39, 131
BsmI GAATGC 1 cut(s) 63
Bso31I GGTCTC 1 cut(s) 131
Bsp1286I GDGCHC 1 cut(s) 165
Bsp143I GATC 1 cut(s) 82
BspACI CCGC 1 cut(s) 8
BspCNI CTCAG 2 cut(s) 64, 127
BspFNI CGCG 1 cut(s) 8
BspHI TCATGA 1 cut(s) 206
BspTNI GGTCTC 1 cut(s) 131
BsrDI GCAATG 1 cut(s) 105
BssMI GATC 1 cut(s) 82
BstDEI CTNAG 2 cut(s) 51, 135
BstF5I GGATG 3 cut(s) 16, 99, 203
BstFNI CGCG 1 cut(s) 8
BstKTI GATC 1 cut(s) 85
BstMAI GTCTC 2 cut(s) 39, 131
BstMBI GATC 1 cut(s) 82
BstMWI GCNNNNNNNGC 1 cut(s) 146
BstUI CGCG 1 cut(s) 8
BstV1I GCAGC 1 cut(s) 133
Bsu36I CCTNAGG 1 cut(s) 135
BtsCI GGATG 3 cut(s) 16, 99, 203
CciI TCATGA 1 cut(s) 206
CseI GACGC 1 cut(s) 14
CviAII CATG 3 cut(s) 27, 80, 207
CviJI RGCY 3 cut(s) 140, 146, 163
CviKI_1 RGCY 3 cut(s) 140, 146, 163
DdeI CTNAG 2 cut(s) 51, 135
DpnI GATC 1 cut(s) 84
DpnII GATC 1 cut(s) 82
DraIII CACNNNGTG 1 cut(s) 116
Ecl136II GAGCTC 1 cut(s) 163
Eco24I GRGCYC 1 cut(s) 165
Eco31I GGTCTC 1 cut(s) 131
Eco53kI GAGCTC 1 cut(s) 163
Eco81I CCTNAGG 1 cut(s) 135
EcoICRI GAGCTC 1 cut(s) 163
EcoT38I GRGCYC 1 cut(s) 165
FaeI CATG 3 cut(s) 30, 83, 210
FaiI YATR 5 cut(s) 28, 81, 171, 191, 208
FatI CATG 3 cut(s) 26, 79, 206
Fnu4HI GCNGC 1 cut(s) 147
FokI GGATG 2 cut(s) 23, 86
FriOI GRGCYC 1 cut(s) 165
Fsp4HI GCNGC 1 cut(s) 147
FspBI CTAG 1 cut(s) 44
GluI GCNGC 1 cut(s) 147
HgaI GACGC 1 cut(s) 14
Hin1II CATG 3 cut(s) 30, 83, 210
HinfI GANTC 1 cut(s) 32
Hpy188I TCNGA 1 cut(s) 54
Hpy188III TCNNGA 2 cut(s) 68, 207
HpyCH4V TGCA 1 cut(s) 110
HpyF10VI GCNNNNNNNGC 1 cut(s) 146
HpyF3I CTNAG 2 cut(s) 51, 135
Hsp92II CATG 3 cut(s) 30, 83, 210
Kzo9I GATC 1 cut(s) 82
LmnI GCTCC 2 cut(s) 160, 168
LpnPI CCDG 3 cut(s) 23, 60, 147
Lsp1109I GCAGC 1 cut(s) 133
LweI GCATC 1 cut(s) 56
MaeI CTAG 1 cut(s) 44
MaeIII GTNAC 2 cut(s) 86, 200
MalI GATC 1 cut(s) 84
MboI GATC 1 cut(s) 82
MhlI GDGCHC 1 cut(s) 165
MlyI GAGTC 1 cut(s) 41
MnlI CCTC 4 cut(s) 113, 130, 185, 188
Mva1269I GAATGC 1 cut(s) 63
MvnI CGCG 1 cut(s) 8
MwoI GCNNNNNNNGC 1 cut(s) 146
NdeII GATC 1 cut(s) 82
NlaIII CATG 3 cut(s) 30, 83, 210
NmuCI GTSAC 1 cut(s) 86
PagI TCATGA 1 cut(s) 206
PctI GAATGC 1 cut(s) 63
PkrI GCNGC 1 cut(s) 148
PleI GAGTC 1 cut(s) 40
PpsI GAGTC 1 cut(s) 40
Psp124BI GAGCTC 1 cut(s) 165
SacI GAGCTC 1 cut(s) 165
SatI GCNGC 1 cut(s) 147
Sau3AI GATC 1 cut(s) 82
SchI GAGTC 1 cut(s) 41
SduI GDGCHC 1 cut(s) 165
SetI ASST 2 cut(s) 165, 177
SfaNI GCATC 1 cut(s) 56
SgeI CNNG 9 cut(s) 19, 39, 50, 56, 80, 87, 92, 146, 169
SsiI CCGC 1 cut(s) 8
SspMI CTAG 1 cut(s) 44
SstI GAGCTC 1 cut(s) 165
TseFI GTSAC 1 cut(s) 86
TseI GCWGC 1 cut(s) 146
Tsp45I GTSAC 1 cut(s) 86
XspI CTAG 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.