Rmu_sc0009183.1_g000005

Mitotic-spindle organizing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009183.1
OG0008654
Physical Location & Seq
Forward (+)
18450 .. 19294
845 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009183.1_g000005.1.cds

Sequence Viewer

Length: 270 bp
atggaagttttagtatatttcacaagagcttgcataagaagccttcttcatatggatgcggatgctgcaaaaacagcccgggagtctctggacctagcatttcagatgtccaacattcttgacacagggcttgatcgtcacaccctctccatccttattgcactctgtgatttgggtctcaaccctgaggcattggctgctgttgtcaaggagctccgaaatgacctcggcccacttacaccacaggattctgctcgtcatgttccgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000923 GO:0000930 GO:0000931 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005640 GO:0005694 GO:0005737 GO:0005815 GO:0005819 GO:0005828 GO:0005856 GO:0005874 GO:0005876 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006336 GO:0006338 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0008092 GO:0008104 GO:0008150 GO:0008274 GO:0009524 GO:0009574 GO:0009987 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0019867 GO:0022402 GO:0022607 GO:0031021 GO:0031055 GO:0031090 GO:0031109 GO:0031497 GO:0031503 GO:0031965 GO:0031967 GO:0031968 GO:0031975 GO:0032153 GO:0032155 GO:0032991 GO:0033036 GO:0033566 GO:0034080 GO:0034508 GO:0034613 GO:0034622 GO:0034629 GO:0034724 GO:0034728 GO:0042175 GO:0042393 GO:0043015 GO:0043044 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043486 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0051179 GO:0051225 GO:0051258 GO:0051276 GO:0051415 GO:0051418 GO:0051641 GO:0061641 GO:0065003 GO:0065004 GO:0070727 GO:0070925 GO:0071103 GO:0071824 GO:0071840 GO:0072686 GO:0090307 GO:0097435 GO:0098588 GO:0098687 GO:0098805 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1902850 GO:1903047
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MOZART1

Protein Analysis

89

Amino Acids

9.76

Weight (kDa)

5.11

Isoelectric Point (pI)

49.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 59
AdeI CACNNNGTG 1 cut(s) 167
AluBI AGCT 2 cut(s) 29, 214
AluI AGCT 2 cut(s) 29, 214
Alw21I GWGCWC 1 cut(s) 216
Alw26I GTCTC 2 cut(s) 90, 182
Ama87I CYCGRG 1 cut(s) 78
AoxI GGCC 1 cut(s) 229
ApeKI GCWGC 2 cut(s) 65, 197
AspS9I GGNCC 2 cut(s) 91, 230
AsuC2I CCSGG 2 cut(s) 79, 80
AvaI CYCGRG 1 cut(s) 78
AvaII GGWCC 1 cut(s) 91
AxyI CCTNAGG 1 cut(s) 186
BanII GRGCYC 1 cut(s) 216
Bbv12I GWGCWC 1 cut(s) 216
BbvI GCAGC 2 cut(s) 52, 184
BccI CCATC 1 cut(s) 158
BcnI CCSGG 2 cut(s) 79, 80
BcoDI GTCTC 2 cut(s) 90, 182
BfaI CTAG 1 cut(s) 95
BisI GCNGC 2 cut(s) 66, 198
BlsI GCNGC 2 cut(s) 67, 199
Bme1390I CCNGG 2 cut(s) 79, 80
Bme18I GGWCC 1 cut(s) 91
BmeT110I CYCGRG 1 cut(s) 78
BmgT120I GGNCC 2 cut(s) 91, 230
BmrFI CCNGG 2 cut(s) 79, 80
BmsI GCATC 2 cut(s) 46, 52
BpuMI CCSGG 2 cut(s) 79, 80
BsaI GGTCTC 1 cut(s) 182
BsaJI CCNNGG 2 cut(s) 78, 226
BsaXI ACNNNNNCTCC 2 cut(s) 131, 161
Bse21I CCTNAGG 1 cut(s) 186
BseDI CCNNGG 2 cut(s) 78, 226
BseGI GGATG 3 cut(s) 61, 67, 150
BseMII CTCAG 1 cut(s) 177
BseXI GCAGC 2 cut(s) 52, 184
BshFI GGCC 1 cut(s) 231
BsiHKAI GWGCWC 1 cut(s) 216
BsiHKCI CYCGRG 1 cut(s) 78
BsiSI CCGG 1 cut(s) 79
BsmAI GTCTC 2 cut(s) 90, 182
BsnI GGCC 1 cut(s) 231
Bso31I GGTCTC 1 cut(s) 182
BsoBI CYCGRG 1 cut(s) 78
Bsp1286I GDGCHC 1 cut(s) 216
Bsp143I GATC 1 cut(s) 133
BspACI CCGC 1 cut(s) 59
BspANI GGCC 1 cut(s) 231
BspCNI CTCAG 1 cut(s) 178
BspTNI GGTCTC 1 cut(s) 182
BssECI CCNNGG 2 cut(s) 78, 226
BssMI GATC 1 cut(s) 133
BstAPI GCANNNNNTGC 1 cut(s) 197
BstC8I GCNNGC 1 cut(s) 31
BstDEI CTNAG 1 cut(s) 186
BstF5I GGATG 3 cut(s) 61, 67, 150
BstKTI GATC 1 cut(s) 136
BstMAI GTCTC 2 cut(s) 90, 182
BstMBI GATC 1 cut(s) 133
BstMWI GCNNNNNNNGC 4 cut(s) 39, 65, 74, 197
BstSCI CCNGG 2 cut(s) 77, 78
BstV1I GCAGC 2 cut(s) 52, 184
Bsu36I CCTNAGG 1 cut(s) 186
BsuRI GGCC 1 cut(s) 231
BtsCI GGATG 3 cut(s) 61, 67, 150
Cac8I GCNNGC 1 cut(s) 31
Cfr13I GGNCC 2 cut(s) 91, 230
Cfr9I CCCGGG 1 cut(s) 78
CviAII CATG 1 cut(s) 260
CviJI RGCY 7 cut(s) 29, 42, 77, 130, 197, 214, 231
CviKI_1 RGCY 7 cut(s) 29, 42, 77, 130, 197, 214, 231
DdeI CTNAG 1 cut(s) 186
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
DraIII CACNNNGTG 1 cut(s) 167
Ecl136II GAGCTC 1 cut(s) 214
Eco24I GRGCYC 1 cut(s) 216
Eco31I GGTCTC 1 cut(s) 182
Eco47I GGWCC 1 cut(s) 91
Eco53kI GAGCTC 1 cut(s) 214
Eco81I CCTNAGG 1 cut(s) 186
Eco88I CYCGRG 1 cut(s) 78
EcoICRI GAGCTC 1 cut(s) 214
EcoT38I GRGCYC 1 cut(s) 216
FaeI CATG 1 cut(s) 263
FaiI YATR 5 cut(s) 16, 35, 51, 53, 261
FatI CATG 1 cut(s) 259
FauNDI CATATG 1 cut(s) 51
Fnu4HI GCNGC 2 cut(s) 66, 198
FokI GGATG 3 cut(s) 68, 74, 137
FriOI GRGCYC 1 cut(s) 216
Fsp4HI GCNGC 2 cut(s) 66, 198
FspBI CTAG 1 cut(s) 95
GluI GCNGC 2 cut(s) 66, 198
HaeIII GGCC 1 cut(s) 231
HapII CCGG 1 cut(s) 79
Hin1II CATG 1 cut(s) 263
HinfI GANTC 2 cut(s) 83, 248
HpaII CCGG 1 cut(s) 79
Hpy188I TCNGA 2 cut(s) 105, 218
Hpy188III TCNNGA 2 cut(s) 89, 119
HpyAV CCTTC 1 cut(s) 53
HpyCH4V TGCA 3 cut(s) 33, 68, 161
HpyF10VI GCNNNNNNNGC 4 cut(s) 39, 65, 74, 197
HpyF3I CTNAG 1 cut(s) 186
Hsp92II CATG 1 cut(s) 263
Kzo9I GATC 1 cut(s) 133
LmnI GCTCC 2 cut(s) 211, 219
LpnPI CCDG 5 cut(s) 74, 92, 111, 198, 230
Lsp1109I GCAGC 2 cut(s) 52, 184
LweI GCATC 2 cut(s) 46, 52
MaeI CTAG 1 cut(s) 95
MaeIII GTNAC 1 cut(s) 137
MalI GATC 1 cut(s) 135
MboI GATC 1 cut(s) 133
MboII GAAGA 1 cut(s) 38
MhlI GDGCHC 1 cut(s) 216
MlyI GAGTC 1 cut(s) 92
MmeI TCCRAC 1 cut(s) 135
MnlI CCTC 3 cut(s) 155, 181, 236
MslI CAYNNNNRTG 1 cut(s) 54
MspI CCGG 1 cut(s) 79
MspR9I CCNGG 2 cut(s) 79, 80
MwoI GCNNNNNNNGC 4 cut(s) 39, 65, 74, 197
NciI CCSGG 2 cut(s) 79, 80
NdeI CATATG 1 cut(s) 51
NdeII GATC 1 cut(s) 133
NlaIII CATG 1 cut(s) 263
NmeAIII GCCGAG 1 cut(s) 207
NmuCI GTSAC 1 cut(s) 137
PfeI GAWTC 1 cut(s) 248
PkrI GCNGC 2 cut(s) 67, 199
PleI GAGTC 1 cut(s) 91
PpsI GAGTC 1 cut(s) 91
Psp124BI GAGCTC 1 cut(s) 216
PspPI GGNCC 2 cut(s) 91, 230
RseI CAYNNNNRTG 1 cut(s) 54
SacI GAGCTC 1 cut(s) 216
SatI GCNGC 2 cut(s) 66, 198
Sau3AI GATC 1 cut(s) 133
Sau96I GGNCC 2 cut(s) 91, 230
SchI GAGTC 1 cut(s) 92
ScrFI CCNGG 2 cut(s) 79, 80
SduI GDGCHC 1 cut(s) 216
SetI ASST 4 cut(s) 31, 96, 216, 228
SfaNI GCATC 2 cut(s) 46, 52
SinI GGWCC 1 cut(s) 91
SmaI CCCGGG 1 cut(s) 80
SmiMI CAYNNNNRTG 1 cut(s) 54
SsiI CCGC 1 cut(s) 59
SspMI CTAG 1 cut(s) 95
SstI GAGCTC 1 cut(s) 216
StyD4I CCNGG 2 cut(s) 77, 78
TfiI GAWTC 1 cut(s) 248
TseFI GTSAC 1 cut(s) 137
TseI GCWGC 2 cut(s) 65, 197
Tsp45I GTSAC 1 cut(s) 137
TspDTI ATGAA 1 cut(s) 38
TspGWI ACGGA 1 cut(s) 255
TspMI CCCGGG 1 cut(s) 78
VpaK11BI GGWCC 1 cut(s) 91
XmaI CCCGGG 1 cut(s) 78
XspI CTAG 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.