Rh1BG084400

Mitotic-spindle organizing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0008654
Physical Location & Seq
Reverse (-)
13198394 .. 13203191
4798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG084400.1

Sequence Viewer

Length: 285 bp
ATGGAGAATGGGATGACGGAGAGGAACCTGTTGAGACTTGCTACAAAAGATTTCAAGCTTCTTCATTTGGACGCGGATGCTGCAAAAACAGCTCGGGAGTCCCTAGACCTAGCATTTCAGATGTCCAACATTCTTGACACGGGGCTTGATCGTCACACCCTCTCCATCCTTATTGCACTCTGTGATTTGGGTCTCAACGCTGAGGCGTTAGCTGCAGTTGTCAAGGAACTCCGAAATGACCTGGGGCCACTTACACCTCAGGATGCTGCTCCTCATGGACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000923 GO:0000930 GO:0000931 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005640 GO:0005694 GO:0005737 GO:0005815 GO:0005819 GO:0005828 GO:0005856 GO:0005874 GO:0005876 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006336 GO:0006338 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0008092 GO:0008104 GO:0008150 GO:0008274 GO:0009524 GO:0009574 GO:0009987 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0019867 GO:0022402 GO:0022607 GO:0031021 GO:0031055 GO:0031090 GO:0031109 GO:0031497 GO:0031503 GO:0031965 GO:0031967 GO:0031968 GO:0031975 GO:0032153 GO:0032155 GO:0032991 GO:0033036 GO:0033566 GO:0034080 GO:0034508 GO:0034613 GO:0034622 GO:0034629 GO:0034724 GO:0034728 GO:0042175 GO:0042393 GO:0043015 GO:0043044 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043486 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0051179 GO:0051225 GO:0051258 GO:0051276 GO:0051415 GO:0051418 GO:0051641 GO:0061641 GO:0065003 GO:0065004 GO:0070727 GO:0070925 GO:0071103 GO:0071824 GO:0071840 GO:0072686 GO:0090307 GO:0097435 GO:0098588 GO:0098687 GO:0098805 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1902850 GO:1903047
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MOZART1

Protein Analysis

94

Amino Acids

10.19

Weight (kDa)

4.95

Isoelectric Point (pI)

32.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MOZART1 PF12554 32 - 78 1.4e-20 Mitotic-spindle organizing gamma-tubulin ring associated
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 74
AciI CCGC 1 cut(s) 74
AdeI CACNNNGTG 1 cut(s) 182
AgsI TTSAA 1 cut(s) 55
AjnI CCWGG 1 cut(s) 240
AluBI AGCT 3 cut(s) 58, 92, 212
AluI AGCT 3 cut(s) 58, 92, 212
Alw26I GTCTC 2 cut(s) 28, 197
Ama87I CYCGRG 1 cut(s) 93
AoxI GGCC 1 cut(s) 245
ApeKI GCWGC 3 cut(s) 80, 212, 266
AspS9I GGNCC 1 cut(s) 245
AvaI CYCGRG 1 cut(s) 93
AxyI CCTNAGG 1 cut(s) 258
BbvCI CCTCAGC 1 cut(s) 201
BbvI GCAGC 3 cut(s) 67, 199, 253
BccI CCATC 1 cut(s) 173
BciT130I CCWGG 1 cut(s) 242
BcoDI GTCTC 2 cut(s) 28, 197
BfaI CTAG 2 cut(s) 104, 110
BfmI CTRYAG 1 cut(s) 213
BisI GCNGC 3 cut(s) 81, 213, 267
BlsI GCNGC 3 cut(s) 82, 214, 268
Bme1390I CCNGG 1 cut(s) 242
BmeT110I CYCGRG 1 cut(s) 93
BmgT120I GGNCC 1 cut(s) 245
BmiI GGNNCC 2 cut(s) 26, 246
BmrFI CCNGG 1 cut(s) 242
BmsI GCATC 2 cut(s) 67, 253
Bpu10I CCTNAGC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 197
BsaJI CCNNGG 1 cut(s) 241
BsaXI ACNNNNNCTCC 2 cut(s) 146, 176
Bse21I CCTNAGG 1 cut(s) 258
BseBI CCWGG 1 cut(s) 242
BseDI CCNNGG 1 cut(s) 241
BseGI GGATG 4 cut(s) 18, 82, 165, 268
BseMII CTCAG 2 cut(s) 192, 272
BseRI GAGGAG 1 cut(s) 261
BseXI GCAGC 3 cut(s) 67, 199, 253
Bsh1236I CGCG 1 cut(s) 74
BshFI GGCC 1 cut(s) 247
BsiHKCI CYCGRG 1 cut(s) 93
BslFI GGGAC 1 cut(s) 85
BsmAI GTCTC 2 cut(s) 28, 197
BsmFI GGGAC 1 cut(s) 85
BsnI GGCC 1 cut(s) 247
Bso31I GGTCTC 1 cut(s) 197
BsoBI CYCGRG 1 cut(s) 93
Bsp143I GATC 1 cut(s) 148
BspACI CCGC 1 cut(s) 74
BspANI GGCC 1 cut(s) 247
BspCNI CTCAG 2 cut(s) 193, 271
BspFNI CGCG 1 cut(s) 74
BspLI GGNNCC 2 cut(s) 26, 246
BspMAI CTGCAG 1 cut(s) 217
BspTNI GGTCTC 1 cut(s) 197
BssECI CCNNGG 1 cut(s) 241
BssMI GATC 1 cut(s) 148
Bst2UI CCWGG 1 cut(s) 242
Bst4CI ACNGT 1 cut(s) 282
BstDEI CTNAG 2 cut(s) 201, 258
BstF5I GGATG 4 cut(s) 18, 82, 165, 268
BstFNI CGCG 1 cut(s) 74
BstKTI GATC 1 cut(s) 151
BstMAI GTCTC 2 cut(s) 28, 197
BstMBI GATC 1 cut(s) 148
BstMWI GCNNNNNNNGC 3 cut(s) 80, 89, 212
BstNI CCWGG 1 cut(s) 242
BstSCI CCNGG 1 cut(s) 240
BstSFI CTRYAG 1 cut(s) 213
BstUI CGCG 1 cut(s) 74
BstV1I GCAGC 3 cut(s) 67, 199, 253
Bsu36I CCTNAGG 1 cut(s) 258
BsuRI GGCC 1 cut(s) 247
BtsCI GGATG 4 cut(s) 18, 82, 165, 268
Cfr13I GGNCC 1 cut(s) 245
CseI GACGC 1 cut(s) 80
CviAII CATG 1 cut(s) 275
CviJI RGCY 5 cut(s) 58, 92, 145, 212, 247
CviKI_1 RGCY 5 cut(s) 58, 92, 145, 212, 247
DdeI CTNAG 2 cut(s) 201, 258
DpnI GATC 1 cut(s) 150
DpnII GATC 1 cut(s) 148
DraIII CACNNNGTG 1 cut(s) 182
Eco31I GGTCTC 1 cut(s) 197
Eco81I CCTNAGG 1 cut(s) 258
Eco88I CYCGRG 1 cut(s) 93
EcoRII CCWGG 1 cut(s) 240
FaeI CATG 1 cut(s) 278
FaiI YATR 1 cut(s) 276
FaqI GGGAC 1 cut(s) 85
FatI CATG 1 cut(s) 274
Fnu4HI GCNGC 3 cut(s) 81, 213, 267
FokI GGATG 4 cut(s) 25, 89, 152, 275
Fsp4HI GCNGC 3 cut(s) 81, 213, 267
FspBI CTAG 2 cut(s) 104, 110
GluI GCNGC 3 cut(s) 81, 213, 267
HaeIII GGCC 1 cut(s) 247
HgaI GACGC 1 cut(s) 80
Hin1II CATG 1 cut(s) 278
HindIII AAGCTT 1 cut(s) 56
HinfI GANTC 1 cut(s) 98
Hpy188I TCNGA 2 cut(s) 120, 233
Hpy188III TCNNGA 3 cut(s) 95, 134, 260
HpyCH4III ACNGT 1 cut(s) 282
HpyCH4V TGCA 3 cut(s) 83, 176, 215
HpyF10VI GCNNNNNNNGC 3 cut(s) 80, 89, 212
HpyF3I CTNAG 2 cut(s) 201, 258
Hsp92II CATG 1 cut(s) 278
Kzo9I GATC 1 cut(s) 148
LmnI GCTCC 1 cut(s) 274
LpnPI CCDG 4 cut(s) 41, 227, 245, 254
Lsp1109I GCAGC 3 cut(s) 67, 199, 253
LweI GCATC 2 cut(s) 67, 253
MaeI CTAG 2 cut(s) 104, 110
MaeIII GTNAC 1 cut(s) 152
MalI GATC 1 cut(s) 150
MboI GATC 1 cut(s) 148
MboII GAAGA 1 cut(s) 53
MlyI GAGTC 1 cut(s) 107
MmeI TCCRAC 1 cut(s) 150
MnlI CCTC 5 cut(s) 15, 170, 196, 267, 282
MspR9I CCNGG 1 cut(s) 242
MvaI CCWGG 1 cut(s) 242
MvnI CGCG 1 cut(s) 74
MwoI GCNNNNNNNGC 3 cut(s) 80, 89, 212
NdeII GATC 1 cut(s) 148
NlaIII CATG 1 cut(s) 278
NlaIV GGNNCC 2 cut(s) 26, 246
NmuCI GTSAC 1 cut(s) 152
PkrI GCNGC 3 cut(s) 82, 214, 268
PleI GAGTC 1 cut(s) 106
PpsI GAGTC 1 cut(s) 106
Psp6I CCWGG 1 cut(s) 240
PspGI CCWGG 1 cut(s) 240
PspN4I GGNNCC 2 cut(s) 26, 246
PspPI GGNCC 1 cut(s) 245
PstI CTGCAG 1 cut(s) 217
SatI GCNGC 3 cut(s) 81, 213, 267
Sau3AI GATC 1 cut(s) 148
Sau96I GGNCC 1 cut(s) 245
SchI GAGTC 1 cut(s) 107
ScrFI CCNGG 1 cut(s) 242
SetI ASST 7 cut(s) 30, 60, 94, 111, 214, 243, 259
SfaNI GCATC 2 cut(s) 67, 253
SfcI CTRYAG 1 cut(s) 213
SsiI CCGC 1 cut(s) 74
SspMI CTAG 2 cut(s) 104, 110
StyD4I CCNGG 1 cut(s) 240
TaaI ACNGT 1 cut(s) 282
TseFI GTSAC 1 cut(s) 152
TseI GCWGC 3 cut(s) 80, 212, 266
Tsp45I GTSAC 1 cut(s) 152
TspDTI ATGAA 1 cut(s) 53
TspGWI ACGGA 1 cut(s) 32
XspI CTAG 2 cut(s) 104, 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.