Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0014584

Physical Location & Seq

Genomic Coordinates Forward (+)

13286617 .. 13293619

Gene Structure 7003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g15160.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGTGGTGGCGCCGCCCAAGTACGTGAGCTCGGTCGGCGATCTGAAACGCCGCGAGCTGCAGAAGAAGAAAGCCAAGTCCGGAGGGTTCGAGTCTCTCAATCTGAGCCCCAATGTCTTCAAAGCAATCAAGCGCAAGGGCTACAAGGTCCCCACTCCCATCCAGCGCAAAACCATGCCCCTCATCCTCTCCGGAAACGACGTCGTCGCCATGGCCCGCACTGGTTCCGGCAAAACGGCAGCGTTTCTGCTCCCCATGCTCGAGCGTTTGAAGGAGCACGTCCCCCAGGGCGGTGTTAGGGCTCTGATTCTCTCTCCAACTCGAGACTTGGCGCTTCAGACCCTTAAGTTTACCAAAGAACTCGCACATTTCATGGACGTTCGAATTAGTTTACTAGTTGGTGGTGATAGCATGGAGAATCAATTTGAGGAGTTGTCTCAAAATCCGGATATTATAATTGCAACTCCGGGTAGGCTGATTCACCATTTGACTGAGATTGAGGAGATGTCACTCCGCTCTGTGGAGTATGTTGTGTTTGATGAGGCGGATTGTCTCTTTGGCATGGGTTTCGCTGAGCAGTTGCATAAGATTCTTGCGCAGCTGAGTGAGAACCGGCAGACGCTGCTGTTTAGTGCAACGTTACCTAGTGCGCTTGCCGAGTTTGCTAAGGCTGGCCTGCAGGATCCTAGGCTTGTGCGGCTTGATTTGGATACTAAGATTAGCCCCGACTTGAAGCTTATGTTTTTCACCTTGCGACAGGAAGAGAAGCATGCGGCGATACTTTATTTGGTGAGGGAGCATATTCATTCTGATGAGCAGACGTTGATATTTGTATCCACTAAGCATCATGTGGAGTTCCTGAACATCTTGTTTAGAGAGGAGGGCATTGAGCCGTCGGTTTGTTATGGTGACATGGATCACGATGCTCGAAAAATTCATATATCAAAGTTTAGGCACAGAAAGACTATGTTGTTAATTGTCACTGATGTTGCAGCCAGGGGAATTGACATTCCATTGCTAGACAATGTTATCAATTGGGACTTTCCCCCAAAGCCTAAACTTTTTGTCCATAGAGTAGGTCGAGCAGCAAGGGCTGGTCGGACCGGTACTGCGTTCTCTCTTGTGACAACTGAAGACATACCTAACCTTTTAGATCTTCATCTGTTTCTTTCAAAACCTATTAGGCCGGCACCTACCGAGCAGGAGGTTTTACAGGATATGGATGGGGTAATGTCCAAGATTGATCAAGCAGTTGCAAATGGAGAAAGTATTTATGGGCGTTTCCCCCAAACAGCTATTGATCTTGTTTCAGACAGGGTTAGAGAGATTATTGAATCTTCTTCAGAACTAAGCCTTTTGCTGAAAACTTGCTCAAATGCATTCCGCTTGTATTCAAAGACAAAGCCCTCCCCTTCAAGGGAGTCTATTAAAAGAGCAAAAGATTTACCTCGGGAAGGGCTGCATCCAATATTTATAAACACACTAAAGGGTGGAGATTTGAAGGCATTGGCATTTTCTGAACGGTTGAAGACATTCAGACCTGAGCAGACCATTCTAGAAGCTGAAGGGAAAGCTGCCAAATCAAAGAATGTGAAGGGTCCTGCTAGTCAGTGGGTCGATGTAATGAAGAGAAAAAGAGCTATCCATGAAGGGATAATCAATCTAGTGCATCAGCAAAATCAGGAACGTTCTAATAATCATGTTGAAGAGGAAGATGGATCTGAGATTATTCCCCTACAGAAAAAGAGAAAGAAAGAATCTTCGGGTTCTAAAAGGAAAGCAACAAGCTTCAAGGATGAGGAGTACTTTATAAGTTCCATACCCACAAATCAACATACTGAAGCAGGACTCGCGGTCAGAGGGAATGAGAACTTTGAGTCTAATAGGTTGGAAGCTGCTGTTCTAGATCTAGTTGCAGATGATAATGTGGGCATGAGGAAACAGAAGTCTGTATATCATTGGGATAAGAGCGGGAAAAAGTATATTAAGCTAAATCCTAACGACCGAGTGACTGCTAGTGGCAAGGTAAAGACAGAGAGTGGTGCGAAAGTAAAACTTGAGAAAACCGGAATGTTCAATAAGTGGAAAGCACGTACACACAAGAACGTATCTTTCAACGGCACTGGCGAAGGGAATGATGAGGAAGCCACAGGCAACCGGAGATGGCAGGGGAACAACAGGGGGAACCCTCGGGGAGGCAGGAAGAAACAGTCTGTTCCTAATGCTCATGTCCGTTCTGAAATCAAAGACTTGGATCAAGTTCGGAAAGAGAGGCAGAAAAAAGCAGATAGAACCTCTTATTTGAAGAGCAAATCTACAAAGGGGGGTAAAAAATTTGGTGGTAAAAATGGAAAAAGAGGAAAGGCAAAGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBP10CT DEAD Helicase_C

Protein Analysis

792

Amino Acids

88.92

Weight (kDa)

9.75

Isoelectric Point (pI)

40.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	52 - 220	2.5e-51	DEAD/DEAH box helicase
ResIII	PF04851	69 - 214	1.8e-07	Type III restriction enzyme, res subunit
Helicase_C	PF00271	258 - 366	1.4e-24	Helicase conserved C-terminal domain
DBP10CT	PF08147	636 - 697	8.8e-12	DBP10CT (NUC160) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77030
fragaria_vesca	FvH4_2g15160 FvH4_2g15160
malus_domestica	MD07G1108300.v1.1
prunus_persica	Prupe.2G131100_v2.0.a1 Prupe.2G131100_v2.0.a1
pyrus_communis	pycom07g09270
rosa_chinensis	RchiOBHm_Chr6g0277821
rosa_laevigata	RLG00000013266
rosa_multiflora	Rmu_sc0001874.1_g000004
rosa_roxburghii	Rroxscaffold_7G00190870
rosa_rugosa	Rorug06G0111700
rosa_samantha	Rh6AG222500 Rh6BG226000 Rh6CG228500 Rh6DG219600
rosa_wichuraiana	Rw6G019430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	455, 1475, 1811
AatII	GACGTC	1 cut(s)	204
Acc16I	TGCGCA	1 cut(s)	597
AccB1I	GGYRCC	2 cut(s)	10, 1189
AccBSI	CCGCTC	2 cut(s)	516, 1971
AccII	CGCG	2 cut(s)	54, 1853
AccIII	TCCGGA	3 cut(s)	80, 191, 445
AclI	AACGTT	2 cut(s)	638, 1687
AclWI	GGATC	5 cut(s)	677, 690, 924, 1726, 2262
AcsI	RAATTY	2 cut(s)	933, 2333
AcuI	CTGAAG	5 cut(s)	320, 1152, 1326, 1584, 1860
AcyI	GRCGYC	2 cut(s)	11, 201
AfaI	GTAC	4 cut(s)	23, 1108, 1805, 2095
AfiI	CCNNNNNNNGG	6 cut(s)	290, 520, 1416, 1417, 1454, 2195
AflII	CTTAAG	1 cut(s)	344
AgeI	ACCGGT	1 cut(s)	1103
AhdI	GACNNNNNGTC	1 cut(s)	1853
AhlI	ACTAGT	1 cut(s)	394
AjiI	CACGTC	1 cut(s)	280
AjnI	CCWGG	2 cut(s)	285, 995
Alw21I	GWGCWC	2 cut(s)	32, 279
Alw26I	GTCTC	4 cut(s)	99, 318, 441, 557
AlwI	GGATC	5 cut(s)	677, 690, 924, 1726, 2262
AlwNI	CAGNNNCTG	1 cut(s)	622
Ama87I	CYCGRG	4 cut(s)	260, 321, 1449, 2190
Aor13HI	TCCGGA	3 cut(s)	80, 191, 445
AoxI	GGCC	3 cut(s)	213, 673, 1184
ApeKI	GCWGC	9 cut(s)	58, 239, 598, 622, 992, 1085, 1459, 1574, 1895
ApoI	RAATTY	2 cut(s)	933, 2333
AsiGI	ACCGGT	1 cut(s)	1103
Asp700I	GAANNNNTTC	1 cut(s)	1532
AspA2I	CCTAGG	1 cut(s)	686
AspLEI	GCGC	6 cut(s)	13, 135, 168, 334, 598, 652
AspS9I	GGNCC	4 cut(s)	148, 214, 1101, 1598
AsuC2I	CCSGG	1 cut(s)	468
AsuHPI	GGTGA	5 cut(s)	416, 473, 739, 802, 920
AsuII	TTCGAA	1 cut(s)	382
AvaI	CYCGRG	4 cut(s)	260, 321, 1449, 2190
AvaII	GGWCC	3 cut(s)	148, 1101, 1598
AvrII	CCTAGG	1 cut(s)	686
BamHI	GGATCC	1 cut(s)	682
BanI	GGYRCC	2 cut(s)	10, 1189
BanII	GRGCYC	3 cut(s)	32, 110, 304
BbsI	GAAGAC	3 cut(s)	109, 1140, 1535
Bbv12I	GWGCWC	2 cut(s)	32, 279
BbvI	GCAGC	9 cut(s)	45, 251, 609, 610, 1004, 1097, 1446, 1561, 1882
BccI	CCATC	4 cut(s)	167, 1217, 1709, 2157
BceAI	ACGGC	3 cut(s)	252, 877, 2134
BcgI	CGANNNNNNTGC	2 cut(s)	550, 584
BciT130I	CCWGG	2 cut(s)	287, 997
BciVI	GTATCC	2 cut(s)	703, 844
BclI	TGATCA	1 cut(s)	1243
BcnI	CCSGG	1 cut(s)	468
BcoDI	GTCTC	4 cut(s)	99, 318, 441, 557
BcuI	ACTAGT	1 cut(s)	394
BfmI	CTRYAG	3 cut(s)	59, 677, 1736
BfoI	RGCGCY	2 cut(s)	14, 335
BfrI	CTTAAG	1 cut(s)	344
BfuI	GTATCC	2 cut(s)	703, 844
BglII	AGATCT	2 cut(s)	1153, 1906
BlnI	CCTAGG	1 cut(s)	686
BlpI	GCTNAGC	1 cut(s)	573
BmcAI	AGTACT	1 cut(s)	1805
Bme1390I	CCNGG	3 cut(s)	287, 468, 997
Bme18I	GGWCC	3 cut(s)	148, 1101, 1598
BmeRI	GACNNNNNGTC	1 cut(s)	1853
BmeT110I	CYCGRG	4 cut(s)	260, 321, 1449, 2190
BmgBI	CACGTC	1 cut(s)	280
BmgT120I	GGNCC	4 cut(s)	148, 214, 1101, 1598
BmiI	GGNNCC	7 cut(s)	12, 150, 226, 684, 1191, 1599, 2186
BmrFI	CCNGG	3 cut(s)	287, 468, 997
BmsI	GCATC	4 cut(s)	853, 913, 1471, 1678
BpiI	GAAGAC	3 cut(s)	109, 1140, 1535
Bpu10I	CCTNAGC	2 cut(s)	666, 1542
Bpu1102I	GCTNAGC	1 cut(s)	573
Bpu14I	TTCGAA	1 cut(s)	382
BpuEI	CTTGAG	1 cut(s)	2078
BpuMI	CCSGG	1 cut(s)	468
BsaAI	YACGTR	2 cut(s)	25, 2093
BsaBI	GATNNNNATC	1 cut(s)	1158
BsaHI	GRCGYC	2 cut(s)	11, 201
BsaJI	CCNNGG	7 cut(s)	210, 285, 286, 686, 996, 1448, 2189
BsaWI	WCCGGW	6 cut(s)	80, 191, 445, 1103, 2066, 2157
Bsc4I	CCNNNNNNNGG	6 cut(s)	290, 520, 1416, 1417, 1454, 2195
Bse118I	RCCGGY	3 cut(s)	612, 1103, 1186
Bse1I	ACTGG	2 cut(s)	226, 2128
Bse3DI	GCAATG	1 cut(s)	1013
Bse8I	GATNNNNATC	1 cut(s)	1158
BseAI	TCCGGA	3 cut(s)	80, 191, 445
BseBI	CCWGG	2 cut(s)	287, 997
BseDI	CCNNGG	7 cut(s)	210, 285, 286, 686, 996, 1448, 2189
BseGI	GGATG	5 cut(s)	159, 183, 1228, 1462, 1801
BseJI	GATNNNNATC	1 cut(s)	1158
BseLI	CCNNNNNNNGG	6 cut(s)	290, 520, 1416, 1417, 1454, 2195
BseMI	GCAATG	1 cut(s)	1013
BseMII	CTCAG	6 cut(s)	95, 483, 564, 593, 1533, 1713
BseNI	ACTGG	2 cut(s)	226, 2128
BseRI	GAGGAG	4 cut(s)	443, 515, 893, 1814
BseXI	GCAGC	9 cut(s)	45, 251, 609, 610, 1004, 1097, 1446, 1561, 1882
Bsh1236I	CGCG	2 cut(s)	54, 1853
Bsh1285I	CGRYCG	2 cut(s)	36, 2005
BshFI	GGCC	3 cut(s)	215, 675, 1186
BshNI	GGYRCC	2 cut(s)	10, 1189
BshTI	ACCGGT	1 cut(s)	1103
BsiEI	CGRYCG	2 cut(s)	36, 2005
BsiHKAI	GWGCWC	2 cut(s)	32, 279
BsiHKCI	CYCGRG	4 cut(s)	260, 321, 1449, 2190
BslFI	GGGAC	3 cut(s)	134, 266, 1052
BslI	CCNNNNNNNGG	6 cut(s)	290, 520, 1416, 1417, 1454, 2195
BsmAI	GTCTC	4 cut(s)	99, 318, 441, 557
BsmFI	GGGAC	3 cut(s)	134, 266, 1052
BsmI	GAATGC	1 cut(s)	1379
BsnI	GGCC	3 cut(s)	215, 675, 1186
BsoBI	CYCGRG	4 cut(s)	260, 321, 1449, 2190
Bsp119I	TTCGAA	1 cut(s)	382
Bsp1286I	GDGCHC	4 cut(s)	32, 110, 279, 304
Bsp13I	TCCGGA	3 cut(s)	80, 191, 445
Bsp143I	GATC	9 cut(s)	40, 682, 916, 1153, 1243, 1300, 1718, 1906, 2254
Bsp1720I	GCTNAGC	1 cut(s)	573
Bsp19I	CCATGG	1 cut(s)	210
BspANI	GGCC	3 cut(s)	215, 675, 1186
BspCNI	CTCAG	6 cut(s)	96, 484, 565, 594, 1534, 1714
BspEI	TCCGGA	3 cut(s)	80, 191, 445
BspFNI	CGCG	2 cut(s)	54, 1853
BspLI	GGNNCC	7 cut(s)	12, 150, 226, 684, 1191, 1599, 2186
BspMAI	CTGCAG	2 cut(s)	63, 681
BspPI	GGATC	5 cut(s)	677, 690, 924, 1726, 2262
BspQI	GCTCTTC	1 cut(s)	2300
BspT104I	TTCGAA	1 cut(s)	382
BspT107I	GGYRCC	2 cut(s)	10, 1189
BspTI	CTTAAG	1 cut(s)	344
BsrBI	CCGCTC	2 cut(s)	516, 1971
BsrDI	GCAATG	1 cut(s)	1013
BsrFI	RCCGGY	3 cut(s)	612, 1103, 1186
BsrI	ACTGG	2 cut(s)	226, 2128
BssAI	RCCGGY	3 cut(s)	612, 1103, 1186
BssECI	CCNNGG	7 cut(s)	210, 285, 286, 686, 996, 1448, 2189
BssMI	GATC	9 cut(s)	40, 682, 916, 1153, 1243, 1300, 1718, 1906, 2254
BssNI	GRCGYC	2 cut(s)	11, 201
BssT1I	CCWWGG	2 cut(s)	210, 686
Bst2UI	CCWGG	2 cut(s)	287, 997
Bst4CI	ACNGT	2 cut(s)	1524, 2211
Bst6I	CTCTTC	4 cut(s)	756, 1622, 1701, 2300
BstACI	GRCGYC	2 cut(s)	11, 201
BstAFI	CTTAAG	1 cut(s)	344
BstAPI	GCANNNNNTGC	1 cut(s)	622
BstBAI	YACGTR	2 cut(s)	25, 2093
BstBI	TTCGAA	1 cut(s)	382
BstC8I	GCNNGC	7 cut(s)	56, 217, 654, 673, 677, 771, 1188
BstDSI	CCRYGG	1 cut(s)	210
BstENI	CCTNNNNNAGG	2 cut(s)	1452, 2193
BstF5I	GGATG	5 cut(s)	159, 183, 1228, 1462, 1801
BstFNI	CGCG	2 cut(s)	54, 1853
BstH2I	RGCGCY	2 cut(s)	14, 335
BstHHI	GCGC	6 cut(s)	13, 135, 168, 334, 598, 652
BstKTI	GATC	9 cut(s)	43, 685, 919, 1156, 1246, 1303, 1721, 1909, 2257
BstMAI	GTCTC	4 cut(s)	99, 318, 441, 557
BstMBI	GATC	9 cut(s)	40, 682, 916, 1153, 1243, 1300, 1718, 1906, 2254
BstMCI	CGRYCG	2 cut(s)	36, 2005
BstMWI	GCNNNNNNNGC	7 cut(s)	36, 256, 622, 662, 697, 1091, 1850
BstNI	CCWGG	2 cut(s)	287, 997
BstNSI	RCATGY	1 cut(s)	773
BstSCI	CCNGG	3 cut(s)	285, 466, 995
BstSFI	CTRYAG	3 cut(s)	59, 677, 1736
BstUI	CGCG	2 cut(s)	54, 1853
BstV1I	GCAGC	9 cut(s)	45, 251, 609, 610, 1004, 1097, 1446, 1561, 1882
BstV2I	GAAGAC	3 cut(s)	109, 1140, 1535
BstX2I	RGATCY	4 cut(s)	682, 1153, 1718, 1906
BstYI	RGATCY	4 cut(s)	682, 1153, 1718, 1906
BsuI	GTATCC	2 cut(s)	703, 844
BsuRI	GGCC	3 cut(s)	215, 675, 1186
BtgI	CCRYGG	1 cut(s)	210
BtrI	CACGTC	1 cut(s)	280
BtsCI	GGATG	5 cut(s)	159, 183, 1228, 1462, 1801
BtsIMutI	CAGTG	4 cut(s)	219, 981, 1616, 2121
Cac8I	GCNNGC	7 cut(s)	56, 217, 654, 673, 677, 771, 1188
CaiI	CAGNNNCTG	1 cut(s)	622
CfoI	GCGC	6 cut(s)	13, 135, 168, 334, 598, 652
Cfr10I	RCCGGY	3 cut(s)	612, 1103, 1186
Cfr13I	GGNCC	4 cut(s)	148, 214, 1101, 1598
CpoI	CGGWCCG	1 cut(s)	1101
CseI	GACGC	1 cut(s)	628
Csp6I	GTAC	4 cut(s)	22, 1107, 1804, 2094
CspAI	ACCGGT	1 cut(s)	1103
CspI	CGGWCCG	1 cut(s)	1101
CviQI	GTAC	4 cut(s)	22, 1107, 1804, 2094
DinI	GGCGCC	1 cut(s)	12
DpnI	GATC	9 cut(s)	42, 684, 918, 1155, 1245, 1302, 1720, 1908, 2256
DpnII	GATC	9 cut(s)	40, 682, 916, 1153, 1243, 1300, 1718, 1906, 2254
DriI	GACNNNNNGTC	1 cut(s)	1853
Eam1104I	CTCTTC	4 cut(s)	756, 1622, 1701, 2300
Eam1105I	GACNNNNNGTC	1 cut(s)	1853
EarI	CTCTTC	4 cut(s)	756, 1622, 1701, 2300
EciI	GGCGGA	1 cut(s)	560
Ecl136II	GAGCTC	1 cut(s)	30
Eco130I	CCWWGG	2 cut(s)	210, 686
Eco24I	GRGCYC	3 cut(s)	32, 110, 304
Eco47I	GGWCC	3 cut(s)	148, 1101, 1598
Eco53kI	GAGCTC	1 cut(s)	30
Eco57I	CTGAAG	5 cut(s)	320, 1152, 1326, 1584, 1860
Eco88I	CYCGRG	4 cut(s)	260, 321, 1449, 2190
EcoICRI	GAGCTC	1 cut(s)	30
EcoNI	CCTNNNNNAGG	2 cut(s)	1452, 2193
EcoO109I	RGGNCCY	2 cut(s)	148, 1598
EcoRII	CCWGG	2 cut(s)	285, 995
EcoT14I	CCWWGG	2 cut(s)	210, 686
EcoT22I	ATGCAT	1 cut(s)	1381
EcoT38I	GRGCYC	3 cut(s)	32, 110, 304
EgeI	GGCGCC	1 cut(s)	12
EheI	GGCGCC	1 cut(s)	12
ErhI	CCWWGG	2 cut(s)	210, 686
FalI	AAGNNNNNCTT	2 cut(s)	2040, 2072
FaqI	GGGAC	3 cut(s)	134, 266, 1052
FauI	CCCGC	2 cut(s)	224, 1964
FbaI	TGATCA	1 cut(s)	1243
FokI	GGATG	5 cut(s)	146, 170, 1235, 1449, 1808
FriOI	GRGCYC	3 cut(s)	32, 110, 304
FspI	TGCGCA	1 cut(s)	597
GlaI	GCGC	6 cut(s)	12, 134, 167, 333, 597, 651
HaeII	RGCGCY	2 cut(s)	14, 335
HaeIII	GGCC	3 cut(s)	215, 675, 1186
HgaI	GACGC	1 cut(s)	628
HhaI	GCGC	6 cut(s)	13, 135, 168, 334, 598, 652
Hin1I	GRCGYC	2 cut(s)	11, 201
Hin6I	GCGC	6 cut(s)	11, 133, 166, 332, 596, 650
HinP1I	GCGC	6 cut(s)	11, 133, 166, 332, 596, 650
HindIII	AAGCTT	2 cut(s)	734, 1786
HphI	GGTGA	5 cut(s)	416, 473, 739, 802, 920
Hpy166II	GTNNAC	3 cut(s)	351, 392, 2096
Hpy8I	GTNNAC	3 cut(s)	351, 392, 2096
Hpy99I	CGWCG	4 cut(s)	203, 206, 209, 898
HpyAV	CCTTC	8 cut(s)	265, 1422, 1448, 1495, 1559, 1588, 1643, 2123
HpyCH4III	ACNGT	2 cut(s)	1524, 2211
HpyCH4IV	ACGT	9 cut(s)	24, 201, 279, 378, 638, 821, 1687, 2092, 2106
HpyF10VI	GCNNNNNNNGC	7 cut(s)	36, 256, 622, 662, 697, 1091, 1850
HpySE526I	ACGT	9 cut(s)	24, 201, 279, 378, 638, 821, 1687, 2092, 2106
Hsp92I	GRCGYC	2 cut(s)	11, 201
HspAI	GCGC	6 cut(s)	11, 133, 166, 332, 596, 650
KasI	GGCGCC	1 cut(s)	10
Kpn2I	TCCGGA	3 cut(s)	80, 191, 445
KroI	GCCGGC	1 cut(s)	1186
KroNI	GCCGGC	1 cut(s)	1188
Ksp22I	TGATCA	1 cut(s)	1243
Kzo9I	GATC	9 cut(s)	40, 682, 916, 1153, 1243, 1300, 1718, 1906, 2254
LguI	GCTCTTC	1 cut(s)	2300
LmnI	GCTCC	3 cut(s)	255, 274, 796
Lsp1109I	GCAGC	9 cut(s)	45, 251, 609, 610, 1004, 1097, 1446, 1561, 1882
LweI	GCATC	4 cut(s)	853, 913, 1471, 1678
MaeII	ACGT	9 cut(s)	24, 201, 279, 378, 638, 821, 1687, 2092, 2106
MaeIII	GTNAC	6 cut(s)	507, 639, 908, 979, 1123, 2008
MalI	GATC	9 cut(s)	42, 684, 918, 1155, 1245, 1302, 1720, 1908, 2256
MbiI	CCGCTC	2 cut(s)	516, 1971
MboI	GATC	9 cut(s)	40, 682, 916, 1153, 1243, 1300, 1718, 1906, 2254
MfeI	CAATTG	1 cut(s)	1033
MflI	RGATCY	4 cut(s)	682, 1153, 1718, 1906
MhlI	GDGCHC	4 cut(s)	32, 110, 279, 304
MluCI	AATT	8 cut(s)	384, 422, 456, 933, 975, 1002, 1033, 2333
Mly113I	GGCGCC	1 cut(s)	11
MlyI	GAGTC	4 cut(s)	101, 1430, 1842, 1886
MmeI	TCCRAC	3 cut(s)	341, 1079, 1869
Mph1103I	ATGCAT	1 cut(s)	1381
MroI	TCCGGA	3 cut(s)	80, 191, 445
MroNI	GCCGGC	1 cut(s)	1186
MroXI	GAANNNNTTC	1 cut(s)	1532
MseI	TTAA	4 cut(s)	345, 974, 1428, 1986
MslI	CAYNNNNRTG	1 cut(s)	810
MspA1I	CMGCKG	1 cut(s)	601
MspCI	CTTAAG	1 cut(s)	344
MspR9I	CCNGG	3 cut(s)	287, 468, 997
MunI	CAATTG	1 cut(s)	1033
Mva1269I	GAATGC	1 cut(s)	1379
MvaI	CCWGG	2 cut(s)	287, 997
MvnI	CGCG	2 cut(s)	54, 1853
MwoI	GCNNNNNNNGC	7 cut(s)	36, 256, 622, 662, 697, 1091, 1850
NaeI	GCCGGC	1 cut(s)	1188
NarI	GGCGCC	1 cut(s)	11
NciI	CCSGG	1 cut(s)	468
NcoI	CCATGG	1 cut(s)	210
NdeII	GATC	9 cut(s)	40, 682, 916, 1153, 1243, 1300, 1718, 1906, 2254
NgoMIV	GCCGGC	1 cut(s)	1186
NlaIV	GGNNCC	7 cut(s)	12, 150, 226, 684, 1191, 1599, 2186
NmeAIII	GCCGAG	1 cut(s)	682
NmuCI	GTSAC	5 cut(s)	507, 908, 979, 1123, 2008
NsbI	TGCGCA	1 cut(s)	597
NsiI	ATGCAT	1 cut(s)	1381
NspI	RCATGY	1 cut(s)	773
NspV	TTCGAA	1 cut(s)	382
PaeI	GCATGC	1 cut(s)	773
PaeR7I	CTCGAG	2 cut(s)	260, 321
PasI	CCCWGGG	1 cut(s)	286
PciSI	GCTCTTC	1 cut(s)	2300
PcsI	WCGNNNNNNNCGW	1 cut(s)	2124
PctI	GAATGC	1 cut(s)	1379
PdiI	GCCGGC	1 cut(s)	1188
PdmI	GAANNNNTTC	1 cut(s)	1532
PfeI	GAWTC	6 cut(s)	307, 418, 478, 589, 1334, 1757
PflFI	GACNNNGTC	1 cut(s)	203
PinAI	ACCGGT	1 cut(s)	1103
PleI	GAGTC	4 cut(s)	100, 1429, 1842, 1885
PluTI	GGCGCC	1 cut(s)	14
PpsI	GAGTC	4 cut(s)	100, 1429, 1842, 1885
Ppu21I	YACGTR	2 cut(s)	25, 2093
PpuMI	RGGWCCY	2 cut(s)	148, 1598
PsiI	TTATAA	3 cut(s)	455, 1475, 1811
Psp124BI	GAGCTC	1 cut(s)	32
Psp1406I	AACGTT	2 cut(s)	638, 1687
Psp5II	RGGWCCY	2 cut(s)	148, 1598
Psp6I	CCWGG	2 cut(s)	285, 995
PspGI	CCWGG	2 cut(s)	285, 995
PspN4I	GGNNCC	7 cut(s)	12, 150, 226, 684, 1191, 1599, 2186
PspPI	GGNCC	4 cut(s)	148, 214, 1101, 1598
PspPPI	RGGWCCY	2 cut(s)	148, 1598
PspXI	VCTCGAGB	1 cut(s)	260
PstI	CTGCAG	2 cut(s)	63, 681
PstNI	CAGNNNCTG	1 cut(s)	622
PsuI	RGATCY	4 cut(s)	682, 1153, 1718, 1906
PsyI	GACNNNGTC	1 cut(s)	203
PvuII	CAGCTG	1 cut(s)	601
RsaI	GTAC	4 cut(s)	23, 1108, 1805, 2095
RsaNI	GTAC	4 cut(s)	22, 1107, 1804, 2094
RseI	CAYNNNNRTG	1 cut(s)	810
Rsr2I	CGGWCCG	1 cut(s)	1101
RsrII	CGGWCCG	1 cut(s)	1101
SacI	GAGCTC	1 cut(s)	32
SapI	GCTCTTC	1 cut(s)	2300
SaqAI	TTAA	4 cut(s)	345, 974, 1428, 1986
Sau3AI	GATC	9 cut(s)	40, 682, 916, 1153, 1243, 1300, 1718, 1906, 2254
Sau96I	GGNCC	4 cut(s)	148, 214, 1101, 1598
SbfI	CCTGCAGG	1 cut(s)	681
ScaI	AGTACT	1 cut(s)	1805
SchI	GAGTC	4 cut(s)	101, 1430, 1842, 1886
ScrFI	CCNGG	3 cut(s)	287, 468, 997
SdaI	CCTGCAGG	1 cut(s)	681
SduI	GDGCHC	4 cut(s)	32, 110, 279, 304
SfaNI	GCATC	4 cut(s)	853, 913, 1471, 1678
SfcI	CTRYAG	3 cut(s)	59, 677, 1736
SfoI	GGCGCC	1 cut(s)	12
Sfr274I	CTCGAG	2 cut(s)	260, 321
SfuI	TTCGAA	1 cut(s)	382
SinI	GGWCC	3 cut(s)	148, 1101, 1598
SlaI	CTCGAG	2 cut(s)	260, 321
SmiMI	CAYNNNNRTG	1 cut(s)	810
SmlI	CTYRAG	4 cut(s)	260, 321, 344, 2057
SmoI	CTYRAG	4 cut(s)	260, 321, 344, 2057
SpeI	ACTAGT	1 cut(s)	394
SphI	GCATGC	1 cut(s)	773
Sse8387I	CCTGCAGG	1 cut(s)	681
Sse9I	AATT	8 cut(s)	384, 422, 456, 933, 975, 1002, 1033, 2333
SspDI	GGCGCC	1 cut(s)	10
SspI	AATATT	1 cut(s)	1470
SstI	GAGCTC	1 cut(s)	32
StyD4I	CCNGG	3 cut(s)	285, 466, 995
StyI	CCWWGG	2 cut(s)	210, 686
TaaI	ACNGT	2 cut(s)	1524, 2211
TaiI	ACGT	9 cut(s)	27, 204, 282, 381, 641, 824, 1690, 2095, 2109
TaqI	TCGA	7 cut(s)	90, 261, 322, 382, 928, 1081, 1617
TaqII	GACCGA	2 cut(s)	22, 2019
TasI	AATT	8 cut(s)	384, 422, 456, 933, 975, 1002, 1033, 2333
TatI	WGTACW	1 cut(s)	1803
TauI	GCSGC	4 cut(s)	16, 54, 700, 776
TfiI	GAWTC	6 cut(s)	307, 418, 478, 589, 1334, 1757
Tru1I	TTAA	4 cut(s)	345, 974, 1428, 1986
Tru9I	TTAA	4 cut(s)	345, 974, 1428, 1986
TscAI	CASTG	4 cut(s)	226, 988, 1616, 2128
TseFI	GTSAC	5 cut(s)	507, 908, 979, 1123, 2008
TseI	GCWGC	9 cut(s)	58, 239, 598, 622, 992, 1085, 1459, 1574, 1895
Tsp45I	GTSAC	5 cut(s)	507, 908, 979, 1123, 2008
TspDTI	ATGAA	6 cut(s)	361, 794, 926, 1148, 1640, 1662
TspGWI	ACGGA	1 cut(s)	2222
TspRI	CASTG	4 cut(s)	226, 988, 1616, 2128
Tth111I	GACNNNGTC	1 cut(s)	203
Vha464I	CTTAAG	1 cut(s)	344
VpaK11BI	GGWCC	3 cut(s)	148, 1101, 1598
XagI	CCTNNNNNAGG	2 cut(s)	1452, 2193
XapI	RAATTY	2 cut(s)	933, 2333
XbaI	TCTAGA	2 cut(s)	1555, 1903
XceI	RCATGY	1 cut(s)	773
XhoI	CTCGAG	2 cut(s)	260, 321
XmaJI	CCTAGG	1 cut(s)	686
XmnI	GAANNNNTTC	1 cut(s)	1532
ZraI	GACGTC	1 cut(s)	202
ZrmI	AGTACT	1 cut(s)	1805
Zsp2I	ATGCAT	1 cut(s)	1381

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.