Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0012203

Physical Location & Seq

Genomic Coordinates Reverse (-)

13766550 .. 13768961

Gene Structure 2412 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g15700.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGACTCCATCTCTCATTCACAACTATCATCTCTACACCTCCACAGCACCACCCAACCTCTCTCGAAAACGCGCCGCCGAGCCCAAAGCAAACCAGGGCGCCGACCCGCCACGGTTTCCGAAATGGGTCCGTAAAGGTAGAAAGCCACCAATGAAGCCAACCACAATGGCTGACCAGCACAGCTCTTCACTCAAACAGGCTCTTCACGACCACGTTCAATCTGGGTCCATGGAAGATGCGCTCTGGGTGTTTGACAAAATGAACAAGCTAGATGCGTACAACTGGAATATCGTTATCAGGGGTTTTGTGGATAATGGGATGTTTCGAGAGGCCATTGAGTTTTATCAGAGAATGGAAATGGAAGGTGTTAAAGAGGATAACTATACTTATCCATTTGTAATCAAGGCCTGTGGTGGGTCGTTATCGTTGGTTGAGGTCCGAAGGGTTCATGGTAAGTTGTTCAAGGTTGGGTTGGTTTCGGACGTATACATATGTAATGCTCTGTGTGCTGTGTATGCGAAACTTGGCTGCATTGGAGATGCAGAGAAGGTGTTTGAAGAAATGCCTGTTAAAGACTTGGTTTCTTGGAATTCCATGATTGGTGGGTATGTTGCGGTTGGGGATGGATGGAGTGGAGTGATTTGTTTTCGAGATATGATTGTGGTTGGGATAATGCCGGATAGATTCAGCATGATCGGGGTTCTTAATGCTTGCGCTATCGAGGGTTTGCTCCAAACTGGGAAGGAAATCCATTGTCAGGTGATGAAATGTATGGTTGAATCGGATGTCATGGTTCAGACTTCGCTTATTGACATGTACCACAAATGCGGTAGAGTAGACTATGCGGAGAGGTTGTTTGATAAGATTTCTCAAAAGAATGTTGTGGTTTGGAATGTGATGATACACGGATATGCGCTAAATGCTTGCCCCGTGGAGGCTTTTTCTTGCTTGAAGATGATGCAAGAGACTGATAAGTTGAAACCTGATGCTATTACGATGATAAATGTACTCCTTTCTTGCACACAAGTAGGAGCCCTCATGGAGGGAAAATCTATCCATGTCTACGCCATTAGACACTGGTTTATCCCTCATATTGTCTTGGAAACGGCTTTGATTGAGTTGTATGGTGCCTGCAGCAGGGTAAAATTAGCAGAACGTATCTTTAATCAACTGGCTCAAAAGAATATGATATCATGGAATACCATGATTTCTGCATATGTACACAATGGATGGAATTGGGAAGCCTTGGAACTATTTCAGGATCTTGTGAGTAAACCTCTTAACCCAGATTCAATTACGATTTCAAGCATCCTACCTGCCTTTTCTGAAGTAGCATCAATAGGGCAGCGGAAGCAAATTCATGGTTATATCTCAAAATTGGAGCATCGTTCGAATACCTTCATCTTGAATTCAACTGTTTACATGTATGCAAAATGTGGGCATCTAGGTACTGCTCAAGAAATCTTTGATAGAATGATATACAGGGATGTCAGCTCATGGAACACTATAATTATGGCATATGCCATTCATGGGTTTGGGAGGAGCTCGACTCGGTTGTTCTGTGAAATGGTAGGCGAGGGCATTCAACCAAATGCGAGCACTTTTGTTTCCCTGTTAACAGCTTGCAGCGTTTCTGGCATGGTCGATGAGGGTTGGAAATACTATGCATCTATGAAATTGGAGTATGGTATTGATCCTGGAATAGAGCACTATGGTTGTATGATTGATCTTATGGGGCGTACAGGTAATCTTGACCAAGCCAAGACTTTTATTGATGAAATGCCATTGCTGCCCACAGCCAAAATCTGGGGGTCCTTGTTGACAGCAAGTAGAAACAATAGAAATATAGAGTTGGCAGAAGTTGCTGCTGAGAACATTTTATCCTTAGAACATGATAATACCGGGTGTTATGTCTTGCTTTCCAATATGTATGCCGAAGCTGGGAGGTGGGAAGATGTGGAAAGGATCAAGTTCCATATGAAGCAAAAAGGACTGAACAAAACTGTTGGATGCAGCTTCGTTGAGAGCAAATGCCAGCCATACAGATTCATCAACTATGACAAGTCCCATGTTGAAAGTAACACGATTTATGATGTTCTAGATATAATTTTGAGGAAGATTGGGGAAGACAAGTATGTTCACAATGTCACCAAGTTCAGACCATTAGACTTGAAGAGAAAGAAAGAAAGTTCTCCAGAGCATCACAGCGTAAGATTGGCAATTTCTTACGGGTTGATCACCACAAAACTCCGACACCCTGTTCTTGTTAGAAAAAACACAAGAGTATGCGAAGATTGCCATACTGCTGCAAAGAAGGTTTCAGAGATAACCAAGAGAGAGATAATAGTAGGGGATGCCAAAGTCTTTCATCACTTCAGAGATGGGAATTGCTCATGTGGTGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

804

Amino Acids

90.91

Weight (kDa)

8.05

Isoelectric Point (pI)

41.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	91 - 137	1.3e-09	PPR repeat family
PPR	PF01535	95 - 123	5.2e-06	PPR repeat
PPR_2	PF13041	395 - 441	7.6e-08	PPR repeat family
PPR	PF01535	397 - 425	2e-06	PPR repeat
PPR_2	PF13041	495 - 542	1.7e-08	PPR repeat family
E_motif	PF20431	615 - 675	5.3e-21	E motif
DYW_deaminase	PF14432	733 - 803	1.3e-26	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35130
fragaria_vesca	FvH4_2g15700
malus_domestica	MD05G1126100.v1.1 MD10G1128900.v1.1
prunus_persica	Prupe.8G169500_v2.0.a1
pyrus_communis	pycom05g12020 pycom05g12050 pycom05g12170 pycom10g11050
rosa_chinensis	RchiOBHm_Chr6g0279001
rosa_laevigata	RLG00000013176
rosa_multiflora	Rmu_sc0002080.1_g000022
rosa_roxburghii	Rroxscaffold_7G00189240
rosa_rugosa	Rorug06G0120900
rosa_samantha	Rh6AG229800 Rh6BG234800 Rh6CG236900 Rh6DG228600
rosa_wichuraiana	Rw6G020130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1324
AccB1I	GGYRCC	2 cut(s)	98, 1127
AccB7I	CCANNNNNTGG	1 cut(s)	1806
AccI	GTMKAC	3 cut(s)	486, 837, 1062
AccII	CGCG	1 cut(s)	72
AciI	CCGC	6 cut(s)	75, 107, 614, 828, 845, 1348
AclWI	GGATC	3 cut(s)	1269, 1688, 1973
AcsI	RAATTY	3 cut(s)	589, 1356, 1408
AcuI	CTGAAG	2 cut(s)	1347, 2359
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	6 cut(s)	278, 818, 1008, 1221, 1450, 1741
AfiI	CCNNNNNNNGG	8 cut(s)	414, 757, 934, 1042, 1137, 1530, 1806, 1941
AflIII	ACRYGT	2 cut(s)	813, 1422
AjnI	CCWGG	2 cut(s)	93, 1696
AloI	GAACNNNNNNTCC	2 cut(s)	1865, 1897
AluBI	AGCT	7 cut(s)	183, 268, 1494, 1545, 1622, 1940, 2016
AluI	AGCT	7 cut(s)	183, 268, 1494, 1545, 1622, 1940, 2016
Alw21I	GWGCWC	3 cut(s)	1547, 1601, 1710
Alw26I	GTCTC	1 cut(s)	959
AlwI	GGATC	3 cut(s)	1269, 1688, 1973
AoxI	GGCC	2 cut(s)	330, 405
ApeKI	GCWGC	8 cut(s)	528, 1134, 1345, 1626, 1789, 1865, 2013, 2306
ApoI	RAATTY	3 cut(s)	589, 1356, 1408
Asp700I	GAANNNNTTC	2 cut(s)	1254, 1397
AspLEI	GCGC	5 cut(s)	74, 101, 241, 716, 916
AspS9I	GGNCC	4 cut(s)	127, 225, 436, 1812
AsuC2I	CCSGG	1 cut(s)	1903
AsuHPI	GGTGA	4 cut(s)	772, 2140, 2230, 2411
AsuII	TTCGAA	1 cut(s)	1391
AvaII	GGWCC	4 cut(s)	127, 225, 436, 1812
BanI	GGYRCC	2 cut(s)	98, 1127
BanII	GRGCYC	3 cut(s)	84, 1036, 1547
BbsI	GAAGAC	1 cut(s)	2133
Bbv12I	GWGCWC	3 cut(s)	1547, 1601, 1710
BbvI	GCAGC	8 cut(s)	515, 1146, 1357, 1638, 1776, 1852, 2025, 2293
BccI	CCATC	5 cut(s)	16, 617, 621, 1224, 2375
BceAI	ACGGC	1 cut(s)	1122
BciT130I	CCWGG	2 cut(s)	95, 1698
BclI	TGATCA	1 cut(s)	2235
BcnI	CCSGG	1 cut(s)	1903
BcoDI	GTCTC	1 cut(s)	959
BfaI	CTAG	3 cut(s)	269, 1445, 2099
BfmI	CTRYAG	1 cut(s)	1132
BfoI	RGCGCY	1 cut(s)	102
BfuAI	ACCTGC	1 cut(s)	1324
BisI	GCNGC	9 cut(s)	75, 529, 1135, 1346, 1627, 1790, 1866, 2014, 2307
BlsI	GCNGC	9 cut(s)	76, 530, 1136, 1347, 1628, 1791, 1867, 2015, 2308
Bme1390I	CCNGG	3 cut(s)	95, 1698, 1903
Bme18I	GGWCC	4 cut(s)	127, 225, 436, 1812
BmgT120I	GGNCC	4 cut(s)	127, 225, 436, 1812
BmiI	GGNNCC	6 cut(s)	100, 128, 226, 1033, 1129, 1813
BmrFI	CCNGG	3 cut(s)	95, 1698, 1903
BmrI	ACTGGG	1 cut(s)	747
BmuI	ACTGGG	1 cut(s)	747
BpiI	GAAGAC	1 cut(s)	2133
BplI	GAGNNNNNCTC	4 cut(s)	1261, 1293, 1534, 1566
BpmI	CTGGAG	1 cut(s)	2178
Bpu14I	TTCGAA	1 cut(s)	1391
BpuEI	CTTGAG	1 cut(s)	1440
BpuMI	CCSGG	1 cut(s)	1903
BsaHI	GRCGYC	1 cut(s)	99
BsaJI	CCNNGG	5 cut(s)	94, 110, 228, 930, 1245
BsaXI	ACNNNNNCTCC	2 cut(s)	839, 869
Bsc4I	CCNNNNNNNGG	8 cut(s)	414, 757, 934, 1042, 1137, 1530, 1806, 1941
Bse1I	ACTGG	4 cut(s)	287, 742, 1082, 1176
Bse3DI	GCAATG	1 cut(s)	1784
BseBI	CCWGG	2 cut(s)	95, 1698
BseDI	CCNNGG	5 cut(s)	94, 110, 228, 930, 1245
BseGI	GGATG	9 cut(s)	324, 628, 632, 790, 1235, 1308, 1492, 2015, 2359
BseLI	CCNNNNNNNGG	8 cut(s)	414, 757, 934, 1042, 1137, 1530, 1806, 1941
BseMI	GCAATG	1 cut(s)	1784
BseMII	CTCAG	1 cut(s)	1860
BseNI	ACTGG	4 cut(s)	287, 742, 1082, 1176
BseRI	GAGGAG	1 cut(s)	1555
BseXI	GCAGC	8 cut(s)	515, 1146, 1357, 1638, 1776, 1852, 2025, 2293
BseYI	CCCAGC	1 cut(s)	1940
Bsh1236I	CGCG	1 cut(s)	72
BshFI	GGCC	2 cut(s)	332, 407
BshNI	GGYRCC	2 cut(s)	98, 1127
BsiHKAI	GWGCWC	3 cut(s)	1547, 1601, 1710
BsiSI	CCGG	2 cut(s)	677, 1902
BslFI	GGGAC	1 cut(s)	2050
BslI	CCNNNNNNNGG	8 cut(s)	414, 757, 934, 1042, 1137, 1530, 1806, 1941
BsmAI	GTCTC	1 cut(s)	959
BsmFI	GGGAC	1 cut(s)	2050
BsmI	GAATGC	1 cut(s)	1581
BsnI	GGCC	2 cut(s)	332, 407
Bsp119I	TTCGAA	1 cut(s)	1391
Bsp1286I	GDGCHC	5 cut(s)	84, 1036, 1547, 1601, 1710
Bsp1407I	TGTACA	1 cut(s)	1219
Bsp143I	GATC	6 cut(s)	693, 1261, 1693, 1726, 1965, 2235
Bsp19I	CCATGG	1 cut(s)	228
BspACI	CCGC	6 cut(s)	75, 107, 614, 828, 845, 1348
BspANI	GGCC	2 cut(s)	332, 407
BspCNI	CTCAG	1 cut(s)	1861
BspFNI	CGCG	1 cut(s)	72
BspLI	GGNNCC	6 cut(s)	100, 128, 226, 1033, 1129, 1813
BspMAI	CTGCAG	1 cut(s)	1136
BspMI	ACCTGC	1 cut(s)	1324
BspPI	GGATC	3 cut(s)	1269, 1688, 1973
BspQI	GCTCTTC	2 cut(s)	190, 207
BspT104I	TTCGAA	1 cut(s)	1391
BspT107I	GGYRCC	2 cut(s)	98, 1127
BsrDI	GCAATG	1 cut(s)	1784
BsrGI	TGTACA	1 cut(s)	1219
BsrI	ACTGG	4 cut(s)	287, 742, 1082, 1176
BssECI	CCNNGG	5 cut(s)	94, 110, 228, 930, 1245
BssMI	GATC	6 cut(s)	693, 1261, 1693, 1726, 1965, 2235
BssNAI	GTATAC	1 cut(s)	487
BssNI	GRCGYC	1 cut(s)	99
BssT1I	CCWWGG	2 cut(s)	228, 1245
Bst1107I	GTATAC	1 cut(s)	487
Bst2UI	CCWGG	2 cut(s)	95, 1698
Bst4CI	ACNGT	3 cut(s)	114, 1417, 2005
Bst6I	CTCTTC	3 cut(s)	190, 207, 2168
BstACI	GRCGYC	1 cut(s)	99
BstAPI	GCANNNNNTGC	1 cut(s)	1862
BstAUI	TGTACA	1 cut(s)	1219
BstBI	TTCGAA	1 cut(s)	1391
BstC8I	GCNNGC	6 cut(s)	712, 925, 1132, 1597, 1624, 2036
BstDEI	CTNAG	2 cut(s)	1869, 1885
BstDSI	CCRYGG	3 cut(s)	110, 228, 930
BstENI	CCTNNNNNAGG	2 cut(s)	1040, 1135
BstF5I	GGATG	9 cut(s)	324, 628, 632, 790, 1235, 1308, 1492, 2015, 2359
BstFNI	CGCG	1 cut(s)	72
BstH2I	RGCGCY	1 cut(s)	102
BstHHI	GCGC	5 cut(s)	74, 101, 241, 716, 916
BstKTI	GATC	6 cut(s)	696, 1264, 1696, 1729, 1968, 2238
BstMAI	GTCTC	1 cut(s)	959
BstMBI	GATC	6 cut(s)	693, 1261, 1693, 1726, 1965, 2235
BstMWI	GCNNNNNNNGC	8 cut(s)	506, 515, 920, 1351, 1635, 1789, 1862, 2295
BstNI	CCWGG	2 cut(s)	95, 1698
BstNSI	RCATGY	2 cut(s)	817, 1426
BstSCI	CCNGG	3 cut(s)	93, 1696, 1901
BstSFI	CTRYAG	1 cut(s)	1132
BstUI	CGCG	1 cut(s)	72
BstV1I	GCAGC	8 cut(s)	515, 1146, 1357, 1638, 1776, 1852, 2025, 2293
BstV2I	GAAGAC	1 cut(s)	2133
BstX2I	RGATCY	1 cut(s)	1261
BstYI	RGATCY	1 cut(s)	1261
BstZ17I	GTATAC	1 cut(s)	487
BsuRI	GGCC	2 cut(s)	332, 407
BtgI	CCRYGG	3 cut(s)	110, 228, 930
BtsCI	GGATG	9 cut(s)	324, 628, 632, 790, 1235, 1308, 1492, 2015, 2359
BtsIMutI	CAGTG	1 cut(s)	1075
BveI	ACCTGC	1 cut(s)	1324
Cac8I	GCNNGC	6 cut(s)	712, 925, 1132, 1597, 1624, 2036
CfoI	GCGC	5 cut(s)	74, 101, 241, 716, 916
Cfr13I	GGNCC	4 cut(s)	127, 225, 436, 1812
Csp6I	GTAC	6 cut(s)	277, 817, 1007, 1220, 1449, 1740
CspCI	CAANNNNNGTGG	2 cut(s)	391, 426
CviQI	GTAC	6 cut(s)	277, 817, 1007, 1220, 1449, 1740
DdeI	CTNAG	2 cut(s)	1869, 1885
DinI	GGCGCC	1 cut(s)	100
DpnI	GATC	6 cut(s)	695, 1263, 1695, 1728, 1967, 2237
DpnII	GATC	6 cut(s)	693, 1261, 1693, 1726, 1965, 2235
Eam1104I	CTCTTC	3 cut(s)	190, 207, 2168
EarI	CTCTTC	3 cut(s)	190, 207, 2168
Ecl136II	GAGCTC	1 cut(s)	1545
Eco130I	CCWWGG	2 cut(s)	228, 1245
Eco147I	AGGCCT	1 cut(s)	407
Eco24I	GRGCYC	3 cut(s)	84, 1036, 1547
Eco32I	GATATC	1 cut(s)	1191
Eco47I	GGWCC	4 cut(s)	127, 225, 436, 1812
Eco53kI	GAGCTC	1 cut(s)	1545
Eco57I	CTGAAG	2 cut(s)	1347, 2359
EcoICRI	GAGCTC	1 cut(s)	1545
EcoNI	CCTNNNNNAGG	2 cut(s)	1040, 1135
EcoO109I	RGGNCCY	1 cut(s)	1812
EcoRI	GAATTC	2 cut(s)	589, 1408
EcoRII	CCWGG	2 cut(s)	93, 1696
EcoRV	GATATC	1 cut(s)	1191
EcoT14I	CCWWGG	2 cut(s)	228, 1245
EcoT22I	ATGCAT	1 cut(s)	1669
EcoT38I	GRGCYC	3 cut(s)	84, 1036, 1547
EgeI	GGCGCC	1 cut(s)	100
EheI	GGCGCC	1 cut(s)	100
ErhI	CCWWGG	2 cut(s)	228, 1245
FaqI	GGGAC	1 cut(s)	2050
FauI	CCCGC	1 cut(s)	114
FauNDI	CATATG	4 cut(s)	491, 1216, 1519, 1977
FbaI	TGATCA	1 cut(s)	2235
FblI	GTMKAC	3 cut(s)	486, 837, 1062
Fnu4HI	GCNGC	9 cut(s)	75, 529, 1135, 1346, 1627, 1790, 1866, 2014, 2307
FokI	GGATG	9 cut(s)	331, 635, 639, 797, 1242, 1295, 1499, 2022, 2366
FriOI	GRGCYC	3 cut(s)	84, 1036, 1547
Fsp4HI	GCNGC	9 cut(s)	75, 529, 1135, 1346, 1627, 1790, 1866, 2014, 2307
FspBI	CTAG	3 cut(s)	269, 1445, 2099
GlaI	GCGC	5 cut(s)	73, 100, 240, 715, 915
GluI	GCNGC	9 cut(s)	75, 529, 1135, 1346, 1627, 1790, 1866, 2014, 2307
GsaI	CCCAGC	1 cut(s)	1944
GsuI	CTGGAG	1 cut(s)	2178
HaeII	RGCGCY	1 cut(s)	102
HaeIII	GGCC	2 cut(s)	332, 407
HapII	CCGG	2 cut(s)	677, 1902
HhaI	GCGC	5 cut(s)	74, 101, 241, 716, 916
Hin1I	GRCGYC	1 cut(s)	99
Hin6I	GCGC	5 cut(s)	72, 99, 239, 714, 914
HinP1I	GCGC	5 cut(s)	72, 99, 239, 714, 914
HincII	GTYRAC	2 cut(s)	1617, 1821
HindII	GTYRAC	2 cut(s)	1617, 1821
HinfI	GANTC	6 cut(s)	4, 684, 779, 1289, 1549, 2046
HpaI	GTTAAC	1 cut(s)	1617
HpaII	CCGG	2 cut(s)	677, 1902
HphI	GGTGA	4 cut(s)	772, 2140, 2230, 2411
Hpy166II	GTNNAC	9 cut(s)	487, 838, 1063, 1222, 1274, 1420, 1617, 1821, 2140
Hpy8I	GTNNAC	9 cut(s)	487, 838, 1063, 1222, 1274, 1420, 1617, 1821, 2140
HpyAV	CCTTC	6 cut(s)	356, 435, 541, 736, 1408, 2308
HpyCH4III	ACNGT	3 cut(s)	114, 1417, 2005
HpyCH4IV	ACGT	3 cut(s)	213, 483, 1156
HpyF10VI	GCNNNNNNNGC	8 cut(s)	506, 515, 920, 1351, 1635, 1789, 1862, 2295
HpyF3I	CTNAG	2 cut(s)	1869, 1885
HpySE526I	ACGT	3 cut(s)	213, 483, 1156
Hsp92I	GRCGYC	1 cut(s)	99
HspAI	GCGC	5 cut(s)	72, 99, 239, 714, 914
KasI	GGCGCC	1 cut(s)	98
Ksp22I	TGATCA	1 cut(s)	2235
KspAI	GTTAAC	1 cut(s)	1617
Kzo9I	GATC	6 cut(s)	693, 1261, 1693, 1726, 1965, 2235
LguI	GCTCTTC	2 cut(s)	190, 207
LmnI	GCTCC	4 cut(s)	735, 1031, 1381, 1542
Lsp1109I	GCAGC	8 cut(s)	515, 1146, 1357, 1638, 1776, 1852, 2025, 2293
MaeI	CTAG	3 cut(s)	269, 1445, 2099
MaeII	ACGT	3 cut(s)	213, 483, 1156
MaeIII	GTNAC	2 cut(s)	2078, 2146
MalI	GATC	6 cut(s)	695, 1263, 1695, 1728, 1967, 2237
MboI	GATC	6 cut(s)	693, 1261, 1693, 1726, 1965, 2235
MflI	RGATCY	1 cut(s)	1261
MhlI	GDGCHC	5 cut(s)	84, 1036, 1547, 1601, 1710
Mly113I	GGCGCC	1 cut(s)	99
MlyI	GAGTC	1 cut(s)	1543
MmeI	TCCRAC	3 cut(s)	1634, 1987, 2275
Mph1103I	ATGCAT	1 cut(s)	1669
MroXI	GAANNNNTTC	2 cut(s)	1254, 1397
MseI	TTAA	6 cut(s)	369, 570, 705, 1164, 1281, 1616
MslI	CAYNNNNRTG	1 cut(s)	909
MspA1I	CMGCKG	1 cut(s)	1348
MspI	CCGG	2 cut(s)	677, 1902
MspR9I	CCNGG	3 cut(s)	95, 1698, 1903
Mva1269I	GAATGC	1 cut(s)	1581
MvaI	CCWGG	2 cut(s)	95, 1698
MvnI	CGCG	1 cut(s)	72
MwoI	GCNNNNNNNGC	8 cut(s)	506, 515, 920, 1351, 1635, 1789, 1862, 2295
NarI	GGCGCC	1 cut(s)	99
NciI	CCSGG	1 cut(s)	1903
NcoI	CCATGG	1 cut(s)	228
NdeI	CATATG	4 cut(s)	491, 1216, 1519, 1977
NdeII	GATC	6 cut(s)	693, 1261, 1693, 1726, 1965, 2235
NlaIV	GGNNCC	6 cut(s)	100, 128, 226, 1033, 1129, 1813
NmeAIII	GCCGAG	1 cut(s)	103
NmuCI	GTSAC	1 cut(s)	2146
NsiI	ATGCAT	1 cut(s)	1669
NspI	RCATGY	2 cut(s)	817, 1426
NspV	TTCGAA	1 cut(s)	1391
PceI	AGGCCT	1 cut(s)	407
PciI	ACATGT	2 cut(s)	813, 1422
PciSI	GCTCTTC	2 cut(s)	190, 207
PctI	GAATGC	1 cut(s)	1581
PdmI	GAANNNNTTC	2 cut(s)	1254, 1397
PfeI	GAWTC	4 cut(s)	684, 779, 1289, 2046
PflMI	CCANNNNNTGG	1 cut(s)	1806
PfoI	TCCNGGA	1 cut(s)	1696
PkrI	GCNGC	9 cut(s)	76, 530, 1136, 1347, 1628, 1791, 1867, 2015, 2308
PleI	GAGTC	1 cut(s)	1543
PluTI	GGCGCC	1 cut(s)	102
PpsI	GAGTC	1 cut(s)	1543
PpuMI	RGGWCCY	1 cut(s)	1812
PscI	ACATGT	2 cut(s)	813, 1422
Psp124BI	GAGCTC	1 cut(s)	1547
Psp5II	RGGWCCY	1 cut(s)	1812
Psp6I	CCWGG	2 cut(s)	93, 1696
PspFI	CCCAGC	1 cut(s)	1940
PspGI	CCWGG	2 cut(s)	93, 1696
PspN4I	GGNNCC	6 cut(s)	100, 128, 226, 1033, 1129, 1813
PspPI	GGNCC	4 cut(s)	127, 225, 436, 1812
PspPPI	RGGWCCY	1 cut(s)	1812
PstI	CTGCAG	1 cut(s)	1136
PsuI	RGATCY	1 cut(s)	1261
RsaI	GTAC	6 cut(s)	278, 818, 1008, 1221, 1450, 1741
RsaNI	GTAC	6 cut(s)	277, 817, 1007, 1220, 1449, 1740
RseI	CAYNNNNRTG	1 cut(s)	909
SacI	GAGCTC	1 cut(s)	1547
SapI	GCTCTTC	2 cut(s)	190, 207
SaqAI	TTAA	6 cut(s)	369, 570, 705, 1164, 1281, 1616
SatI	GCNGC	9 cut(s)	75, 529, 1135, 1346, 1627, 1790, 1866, 2014, 2307
Sau3AI	GATC	6 cut(s)	693, 1261, 1693, 1726, 1965, 2235
Sau96I	GGNCC	4 cut(s)	127, 225, 436, 1812
SchI	GAGTC	1 cut(s)	1543
ScrFI	CCNGG	3 cut(s)	95, 1698, 1903
SduI	GDGCHC	5 cut(s)	84, 1036, 1547, 1601, 1710
SfcI	CTRYAG	1 cut(s)	1132
SfoI	GGCGCC	1 cut(s)	100
SfuI	TTCGAA	1 cut(s)	1391
SinI	GGWCC	4 cut(s)	127, 225, 436, 1812
SmiMI	CAYNNNNRTG	1 cut(s)	909
SmlI	CTYRAG	1 cut(s)	1455
SmoI	CTYRAG	1 cut(s)	1455
SseBI	AGGCCT	1 cut(s)	407
SsiI	CCGC	6 cut(s)	75, 107, 614, 828, 845, 1348
SspDI	GGCGCC	1 cut(s)	98
SspMI	CTAG	3 cut(s)	269, 1445, 2099
SstI	GAGCTC	1 cut(s)	1547
StuI	AGGCCT	1 cut(s)	407
StyD4I	CCNGG	3 cut(s)	93, 1696, 1901
StyI	CCWWGG	2 cut(s)	228, 1245
TaaI	ACNGT	3 cut(s)	114, 1417, 2005
TaiI	ACGT	3 cut(s)	216, 486, 1159
TaqI	TCGA	7 cut(s)	64, 325, 649, 720, 1391, 1547, 1644
TatI	WGTACW	2 cut(s)	1006, 1219
TauI	GCSGC	1 cut(s)	77
TfiI	GAWTC	4 cut(s)	684, 779, 1289, 2046
Tru1I	TTAA	6 cut(s)	369, 570, 705, 1164, 1281, 1616
Tru9I	TTAA	6 cut(s)	369, 570, 705, 1164, 1281, 1616
TscAI	CASTG	1 cut(s)	1082
TseFI	GTSAC	1 cut(s)	2146
TseI	GCWGC	8 cut(s)	528, 1134, 1345, 1626, 1789, 1865, 2013, 2306
Tsp45I	GTSAC	1 cut(s)	2146
TspGWI	ACGGA	2 cut(s)	119, 921
TspRI	CASTG	1 cut(s)	1082
Van91I	CCANNNNNTGG	1 cut(s)	1806
VpaK11BI	GGWCC	4 cut(s)	127, 225, 436, 1812
XagI	CCTNNNNNAGG	2 cut(s)	1040, 1135
XapI	RAATTY	3 cut(s)	589, 1356, 1408
XbaI	TCTAGA	1 cut(s)	2098
XceI	RCATGY	2 cut(s)	817, 1426
XcmI	CCANNNNNNNNNTGG	1 cut(s)	218
XmiI	GTMKAC	3 cut(s)	486, 837, 1062
XmnI	GAANNNNTTC	2 cut(s)	1254, 1397
XspI	CTAG	3 cut(s)	269, 1445, 2099
Zsp2I	ATGCAT	1 cut(s)	1669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.