Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002080.1

Orthogroup ID

OG0012203

Physical Location & Seq

Genomic Coordinates Forward (+)

98583 .. 100997

Gene Structure 2415 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002080.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

atgactccaactctcgctctcaactattatctctacacctccacagcaccacccaacctctctcgaaaacgcgccgccgagcccagagcaaaccagggcgccgcccacccgccaagatttcccaaatgggttcggaaagccgcaaaaccaccaatgaagtcaaccacactgattgaacagcacagctcttcgctcaaacaggctcttcatgaccatgttcaatctgggtccatggaagacgcgctctgggtgtttgagaaaatgaaccagtcagatgcgtacaactggaatatcgttatcagaggttttacggataatgggttgttccgagaggcgattgagttttatcggagaatggaatttgaaggtgttgcagcggataactatactttcccatttgtaatcaaggcatgtggtgggtccttatcgttggccgaagtccgaagggttcacgggaagttgttcaaggttgggttggtttcggacgtatacatatgtaactctctgtgtgctgtgtatgcgaaacttggttgcatagaagatgcagagaaggtgtttgaagaaatgcctgttaaagacttggtttcttggaattcgatgattggtgggtatgttgcagttggggatggatggagtgcagtggtttgttttcaagagatgctggtggttgggataatgccggatagattcagcatgatcggcgttcttaatgcttgtgctatcgagggtttgctccaaactgggaaggaaatccattgccaggtgatgaaatgtgtggttgaatcagatgtcatggctcaaacctcgcttattgacatgtaccacaaatgcggtagactagactatgcggagaggttgtttgataagatttctcaaaagaatgttgtggtttggaatgcgatgatacacggatatgcgctaaatgctcgtcccgtggagtctttttcttgcttgaaaacgatgcaagagactgataagttgaggcctgatgctattacgatgataaatttactcccttcttgcacacaagtaggagccctcatggagggaaaatctatccatggctacgcaattagacatgggtttctccctcatattgtcttggaaacggctctgattgagttgtatggtgcgtgcagcagggtaaaatttgcagaacgtatatttggccaactagctcaaaagaatttgatatcatggaacaccatgatgtctgcgtatgtacacaatggacggaattgggaagccttggaactatttcaggatcttgtgagtaaacctcttgacccagacccaattacgatttcaagcatcctacctgcctattctgaagtagcatcatttgggcagcggaagcaaattcatggttatatctcaaaattggagcatcattcgaataccttcatcttgaattcaactgtttacatgtatgcaaaatgtgggcatctaggtactgcccaagaaatctttgataggatgatatacagggatgtcagctcatggaacactattattatggcttatgccattcatgggtttgggagaagatcaactcggttgttctccaaaatggtagaaaagggcattcaaccaaatgagagcacttttgtttccctgttaacagcttgtagcatttctggcatggtcgatgagggttggaaatactatgcatctatgaaattagagtacggtattgatcctggaatagagcactacggttgtatgattgatcttcttgggcgtacaggtaatcttgaccaagccaagacttttattgacgaaatgccgttgctgcccacagccagaatctggggttctttactgacagccagtagaaacaacagaaacatagagttagcagaggttgctgctgagaacattttatccttggaacatgataatactgggtgttacgtcttgctttccaatatgtatgctgaagctggaaggtgggaagatgtaaaacggatcaaatttcgtatgaagcaaagaggactggaaaaaactattggatgcagctatcttgagaccaaatgtaagtcttacaggttcatcaaccacgacaagtcgcacgttgaaagtgacacgatttatgaggttttagacgtaattttgaggaagattggggaagacaagtatgttcacagtatcaccaagttcagacccttggatttgatgagaaagaaacaaaattctgcagagcatcacagtgtaagattggcaatttcttatgggctgatctccacgaaactcagagacccggttcttgttagaagaaacacaagaatatgcgaagattgccataatgctgctaagaaggtttcagagatgaccaagagagagataatagtaggggattccaaggtctttcaccacttcagagatgggaattgctcatgtggtgattattggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

804

Amino Acids

91.03

Weight (kDa)

8.29

Isoelectric Point (pI)

43.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35130
fragaria_vesca	FvH4_2g15700
malus_domestica	MD05G1126100.v1.1 MD10G1128900.v1.1
prunus_persica	Prupe.8G169500_v2.0.a1
pyrus_communis	pycom05g12020 pycom05g12050 pycom05g12170 pycom10g11050
rosa_chinensis	RchiOBHm_Chr6g0279001
rosa_laevigata	RLG00000013176
rosa_multiflora	Rmu_sc0002080.1_g000022
rosa_roxburghii	Rroxscaffold_7G00189240
rosa_rugosa	Rorug06G0120900
rosa_samantha	Rh6AG229800 Rh6BG234800 Rh6CG236900 Rh6DG228600
rosa_wichuraiana	Rw6G020130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1327
AccB1I	GGYRCC	1 cut(s)	98
AccB7I	CCANNNNNTGG	1 cut(s)	1809
AccI	GTMKAC	2 cut(s)	489, 835
AccII	CGCG	2 cut(s)	72, 242
AciI	CCGC	8 cut(s)	75, 102, 110, 141, 377, 831, 848, 1351
AclWI	GGATC	3 cut(s)	1272, 1691, 1976
AcoI	YGGCCR	2 cut(s)	432, 1168
AcsI	RAATTY	9 cut(s)	359, 592, 1006, 1148, 1186, 1359, 1411, 1973, 2191
AcuI	CTGAAG	3 cut(s)	1350, 1959, 2362
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	6 cut(s)	281, 821, 1224, 1453, 1688, 1744
AfiI	CCNNNNNNNGG	4 cut(s)	760, 1045, 1533, 1809
AflIII	ACRYGT	2 cut(s)	816, 1425
AjnI	CCWGG	3 cut(s)	93, 759, 1699
AjuI	GAANNNNNNNTTGG	6 cut(s)	1149, 1181, 1288, 1320, 1992, 2024
AloI	GAACNNNNNNTCC	2 cut(s)	1868, 1900
AluBI	AGCT	6 cut(s)	186, 1178, 1497, 1625, 1943, 2019
AluI	AGCT	6 cut(s)	186, 1178, 1497, 1625, 1943, 2019
Alw21I	GWGCWC	2 cut(s)	1604, 1713
Alw26I	GTCTC	3 cut(s)	962, 2021, 2250
AlwI	GGATC	3 cut(s)	1272, 1691, 1976
AlwNI	CAGNNNCTG	1 cut(s)	1809
AoxI	GGCC	3 cut(s)	432, 983, 1168
ApeKI	GCWGC	7 cut(s)	374, 1137, 1348, 1792, 1868, 2016, 2309
ApoI	RAATTY	9 cut(s)	359, 592, 1006, 1148, 1186, 1359, 1411, 1973, 2191
Asp700I	GAANNNNTTC	3 cut(s)	461, 1257, 1400
AspLEI	GCGC	4 cut(s)	74, 101, 244, 919
AspS9I	GGNCC	2 cut(s)	228, 420
AsuC2I	CCSGG	1 cut(s)	2261
AsuHPI	GGTGA	4 cut(s)	775, 2143, 2363, 2414
AsuII	TTCGAA	1 cut(s)	1394
AvaII	GGWCC	2 cut(s)	228, 420
BalI	TGGCCA	1 cut(s)	1170
BanI	GGYRCC	1 cut(s)	98
BanII	GRGCYC	2 cut(s)	84, 1039
BbsI	GAAGAC	2 cut(s)	243, 2136
Bbv12I	GWGCWC	2 cut(s)	1604, 1713
BbvI	GCAGC	7 cut(s)	386, 1149, 1360, 1779, 1855, 2028, 2296
BccI	CCATC	3 cut(s)	620, 624, 2378
BceAI	ACGGC	2 cut(s)	1125, 1771
BciT130I	CCWGG	3 cut(s)	95, 761, 1701
BcnI	CCSGG	1 cut(s)	2261
BcoDI	GTCTC	3 cut(s)	962, 2021, 2250
BfaI	CTAG	3 cut(s)	839, 1175, 1448
BfmI	CTRYAG	1 cut(s)	2196
BfoI	RGCGCY	1 cut(s)	102
BfuAI	ACCTGC	1 cut(s)	1327
Bme1390I	CCNGG	4 cut(s)	95, 761, 1701, 2261
Bme18I	GGWCC	2 cut(s)	228, 420
BmgT120I	GGNCC	2 cut(s)	228, 420
BmiI	GGNNCC	4 cut(s)	100, 229, 421, 1036
BmrFI	CCNGG	4 cut(s)	95, 761, 1701, 2261
BmrI	ACTGGG	2 cut(s)	750, 1914
BmuI	ACTGGG	2 cut(s)	750, 1914
BpiI	GAAGAC	2 cut(s)	243, 2136
BplI	GAGNNNNNCTC	2 cut(s)	1264, 1296
Bpu14I	TTCGAA	1 cut(s)	1394
BpuEI	CTTGAG	1 cut(s)	2045
BpuMI	CCSGG	1 cut(s)	2261
BsaHI	GRCGYC	1 cut(s)	99
BsaI	GGTCTC	2 cut(s)	2021, 2250
BsaJI	CCNNGG	8 cut(s)	94, 231, 933, 1060, 1248, 1887, 2166, 2361
BsaXI	ACNNNNNCTCC	2 cut(s)	842, 872
Bsc4I	CCNNNNNNNGG	4 cut(s)	760, 1045, 1533, 1809
Bse1I	ACTGG	6 cut(s)	268, 290, 745, 1830, 1909, 2001
Bse3DI	GCAATG	1 cut(s)	754
BseBI	CCWGG	3 cut(s)	95, 761, 1701
BseDI	CCNNGG	8 cut(s)	94, 231, 933, 1060, 1248, 1887, 2166, 2361
BseGI	GGATG	6 cut(s)	631, 635, 1311, 1482, 1495, 2018
BseLI	CCNNNNNNNGG	4 cut(s)	760, 1045, 1533, 1809
BseMI	GCAATG	1 cut(s)	754
BseMII	CTCAG	2 cut(s)	1863, 2266
BseNI	ACTGG	6 cut(s)	268, 290, 745, 1830, 1909, 2001
BseXI	GCAGC	7 cut(s)	386, 1149, 1360, 1779, 1855, 2028, 2296
BsgI	GTGCAG	2 cut(s)	657, 1156
Bsh1236I	CGCG	2 cut(s)	72, 242
BshFI	GGCC	3 cut(s)	434, 985, 1170
BshNI	GGYRCC	1 cut(s)	98
BsiHKAI	GWGCWC	2 cut(s)	1604, 1713
BsiSI	CCGG	2 cut(s)	680, 2261
BslFI	GGGAC	1 cut(s)	915
BslI	CCNNNNNNNGG	4 cut(s)	760, 1045, 1533, 1809
BsmAI	GTCTC	3 cut(s)	962, 2021, 2250
BsmFI	GGGAC	1 cut(s)	915
BsmI	GAATGC	2 cut(s)	901, 1584
BsnI	GGCC	3 cut(s)	434, 985, 1170
Bso31I	GGTCTC	2 cut(s)	2021, 2250
Bsp119I	TTCGAA	1 cut(s)	1394
Bsp1286I	GDGCHC	4 cut(s)	84, 1039, 1604, 1713
Bsp1407I	TGTACA	1 cut(s)	1222
Bsp143I	GATC	7 cut(s)	696, 1264, 1547, 1696, 1729, 1968, 2238
Bsp19I	CCATGG	2 cut(s)	231, 1060
BspACI	CCGC	8 cut(s)	75, 102, 110, 141, 377, 831, 848, 1351
BspANI	GGCC	3 cut(s)	434, 985, 1170
BspCNI	CTCAG	2 cut(s)	1864, 2265
BspFNI	CGCG	2 cut(s)	72, 242
BspHI	TCATGA	1 cut(s)	208
BspLI	GGNNCC	4 cut(s)	100, 229, 421, 1036
BspMAI	CTGCAG	1 cut(s)	2200
BspMI	ACCTGC	1 cut(s)	1327
BspPI	GGATC	3 cut(s)	1272, 1691, 1976
BspQI	GCTCTTC	2 cut(s)	193, 210
BspT104I	TTCGAA	1 cut(s)	1394
BspT107I	GGYRCC	1 cut(s)	98
BspTNI	GGTCTC	2 cut(s)	2021, 2250
BsrDI	GCAATG	1 cut(s)	754
BsrGI	TGTACA	1 cut(s)	1222
BsrI	ACTGG	6 cut(s)	268, 290, 745, 1830, 1909, 2001
BssECI	CCNNGG	8 cut(s)	94, 231, 933, 1060, 1248, 1887, 2166, 2361
BssMI	GATC	7 cut(s)	696, 1264, 1547, 1696, 1729, 1968, 2238
BssNAI	GTATAC	1 cut(s)	490
BssNI	GRCGYC	1 cut(s)	99
BssT1I	CCWWGG	6 cut(s)	231, 1060, 1248, 1887, 2166, 2361
Bst1107I	GTATAC	1 cut(s)	490
Bst2UI	CCWGG	3 cut(s)	95, 761, 1701
Bst4CI	ACNGT	5 cut(s)	1420, 1691, 1718, 2147, 2210
Bst6I	CTCTTC	2 cut(s)	193, 210
BstACI	GRCGYC	1 cut(s)	99
BstAPI	GCANNNNNTGC	1 cut(s)	1865
BstAUI	TGTACA	1 cut(s)	1222
BstBI	TTCGAA	1 cut(s)	1394
BstC8I	GCNNGC	1 cut(s)	1135
BstDEI	CTNAG	3 cut(s)	1872, 2252, 2313
BstDSI	CCRYGG	3 cut(s)	231, 933, 1060
BstENI	CCTNNNNNAGG	1 cut(s)	1043
BstF5I	GGATG	6 cut(s)	631, 635, 1311, 1482, 1495, 2018
BstFNI	CGCG	2 cut(s)	72, 242
BstH2I	RGCGCY	1 cut(s)	102
BstHHI	GCGC	4 cut(s)	74, 101, 244, 919
BstKTI	GATC	7 cut(s)	699, 1267, 1550, 1699, 1732, 1971, 2241
BstMAI	GTCTC	3 cut(s)	962, 2021, 2250
BstMBI	GATC	7 cut(s)	696, 1264, 1547, 1696, 1729, 1968, 2238
BstMWI	GCNNNNNNNGC	8 cut(s)	518, 699, 923, 1354, 1638, 1792, 1865, 2298
BstNI	CCWGG	3 cut(s)	95, 761, 1701
BstNSI	RCATGY	3 cut(s)	414, 820, 1429
BstSCI	CCNGG	4 cut(s)	93, 759, 1699, 2259
BstSFI	CTRYAG	1 cut(s)	2196
BstUI	CGCG	2 cut(s)	72, 242
BstV1I	GCAGC	7 cut(s)	386, 1149, 1360, 1779, 1855, 2028, 2296
BstV2I	GAAGAC	2 cut(s)	243, 2136
BstX2I	RGATCY	1 cut(s)	1264
BstYI	RGATCY	1 cut(s)	1264
BstZ17I	GTATAC	1 cut(s)	490
BsuRI	GGCC	3 cut(s)	434, 985, 1170
BtgI	CCRYGG	3 cut(s)	231, 933, 1060
BtgZI	GCGATG	1 cut(s)	914
BtsCI	GGATG	6 cut(s)	631, 635, 1311, 1482, 1495, 2018
BtsI	GCAGTG	1 cut(s)	645
BtsIMutI	CAGTG	3 cut(s)	167, 645, 2215
BveI	ACCTGC	1 cut(s)	1327
Cac8I	GCNNGC	1 cut(s)	1135
CaiI	CAGNNNCTG	1 cut(s)	1809
CciI	TCATGA	1 cut(s)	208
CfoI	GCGC	4 cut(s)	74, 101, 244, 919
Cfr13I	GGNCC	2 cut(s)	228, 420
CseI	GACGC	1 cut(s)	248
Csp6I	GTAC	6 cut(s)	280, 820, 1223, 1452, 1687, 1743
CspCI	CAANNNNNGTGG	4 cut(s)	154, 189, 394, 429
CviQI	GTAC	6 cut(s)	280, 820, 1223, 1452, 1687, 1743
DdeI	CTNAG	3 cut(s)	1872, 2252, 2313
DinI	GGCGCC	1 cut(s)	100
DpnI	GATC	7 cut(s)	698, 1266, 1549, 1698, 1731, 1970, 2240
DpnII	GATC	7 cut(s)	696, 1264, 1547, 1696, 1729, 1968, 2238
EaeI	YGGCCR	2 cut(s)	432, 1168
Eam1104I	CTCTTC	2 cut(s)	193, 210
EarI	CTCTTC	2 cut(s)	193, 210
Eco130I	CCWWGG	6 cut(s)	231, 1060, 1248, 1887, 2166, 2361
Eco147I	AGGCCT	1 cut(s)	985
Eco24I	GRGCYC	2 cut(s)	84, 1039
Eco31I	GGTCTC	2 cut(s)	2021, 2250
Eco32I	GATATC	1 cut(s)	1194
Eco47I	GGWCC	2 cut(s)	228, 420
Eco57I	CTGAAG	3 cut(s)	1350, 1959, 2362
EcoNI	CCTNNNNNAGG	1 cut(s)	1043
EcoO109I	RGGNCCY	1 cut(s)	420
EcoRI	GAATTC	2 cut(s)	592, 1411
EcoRII	CCWGG	3 cut(s)	93, 759, 1699
EcoRV	GATATC	1 cut(s)	1194
EcoT14I	CCWWGG	6 cut(s)	231, 1060, 1248, 1887, 2166, 2361
EcoT22I	ATGCAT	1 cut(s)	1672
EcoT38I	GRGCYC	2 cut(s)	84, 1039
EgeI	GGCGCC	1 cut(s)	100
EheI	GGCGCC	1 cut(s)	100
ErhI	CCWWGG	6 cut(s)	231, 1060, 1248, 1887, 2166, 2361
FaqI	GGGAC	1 cut(s)	915
FauI	CCCGC	1 cut(s)	117
FauNDI	CATATG	1 cut(s)	494
FblI	GTMKAC	2 cut(s)	489, 835
FokI	GGATG	6 cut(s)	638, 642, 1298, 1489, 1502, 2025
FriOI	GRGCYC	2 cut(s)	84, 1039
FspBI	CTAG	3 cut(s)	839, 1175, 1448
GlaI	GCGC	4 cut(s)	73, 100, 243, 918
HaeII	RGCGCY	1 cut(s)	102
HaeIII	GGCC	3 cut(s)	434, 985, 1170
HapII	CCGG	2 cut(s)	680, 2261
HgaI	GACGC	1 cut(s)	248
HhaI	GCGC	4 cut(s)	74, 101, 244, 919
Hin1I	GRCGYC	1 cut(s)	99
Hin6I	GCGC	4 cut(s)	72, 99, 242, 917
HinP1I	GCGC	4 cut(s)	72, 99, 242, 917
HincII	GTYRAC	2 cut(s)	162, 1620
HindII	GTYRAC	2 cut(s)	162, 1620
HinfI	GANTC	6 cut(s)	4, 687, 782, 938, 1806, 2357
HpaI	GTTAAC	1 cut(s)	1620
HpaII	CCGG	2 cut(s)	680, 2261
HphI	GGTGA	4 cut(s)	775, 2143, 2363, 2414
Hpy166II	GTNNAC	9 cut(s)	162, 451, 490, 836, 1225, 1277, 1423, 1620, 2143
Hpy188III	TCNNGA	8 cut(s)	63, 209, 653, 1262, 1283, 1408, 1754, 2024
Hpy8I	GTNNAC	9 cut(s)	162, 451, 490, 836, 1225, 1277, 1423, 1620, 2143
HpyAV	CCTTC	8 cut(s)	359, 438, 544, 739, 1026, 1411, 1941, 2311
HpyCH4III	ACNGT	5 cut(s)	1420, 1691, 1718, 2147, 2210
HpyCH4IV	ACGT	5 cut(s)	486, 1159, 1914, 2073, 2106
HpyF10VI	GCNNNNNNNGC	8 cut(s)	518, 699, 923, 1354, 1638, 1792, 1865, 2298
HpyF3I	CTNAG	3 cut(s)	1872, 2252, 2313
HpySE526I	ACGT	5 cut(s)	486, 1159, 1914, 2073, 2106
Hsp92I	GRCGYC	1 cut(s)	99
HspAI	GCGC	4 cut(s)	72, 99, 242, 917
KasI	GGCGCC	1 cut(s)	98
KspAI	GTTAAC	1 cut(s)	1620
Kzo9I	GATC	7 cut(s)	696, 1264, 1547, 1696, 1729, 1968, 2238
LguI	GCTCTTC	2 cut(s)	193, 210
LmnI	GCTCC	3 cut(s)	738, 1034, 1384
Lsp1109I	GCAGC	7 cut(s)	386, 1149, 1360, 1779, 1855, 2028, 2296
MaeI	CTAG	3 cut(s)	839, 1175, 1448
MaeII	ACGT	5 cut(s)	486, 1159, 1914, 2073, 2106
MaeIII	GTNAC	3 cut(s)	497, 1910, 2081
MalI	GATC	7 cut(s)	698, 1266, 1549, 1698, 1731, 1970, 2240
MboI	GATC	7 cut(s)	696, 1264, 1547, 1696, 1729, 1968, 2238
MflI	RGATCY	1 cut(s)	1264
MhlI	GDGCHC	4 cut(s)	84, 1039, 1604, 1713
MlsI	TGGCCA	1 cut(s)	1170
MluNI	TGGCCA	1 cut(s)	1170
Mly113I	GGCGCC	1 cut(s)	99
MlyI	GAGTC	1 cut(s)	947
MmeI	TCCRAC	2 cut(s)	32, 1637
Mox20I	TGGCCA	1 cut(s)	1170
Mph1103I	ATGCAT	1 cut(s)	1672
MroXI	GAANNNNTTC	3 cut(s)	461, 1257, 1400
MscI	TGGCCA	1 cut(s)	1170
MseI	TTAA	3 cut(s)	573, 708, 1619
MslI	CAYNNNNRTG	4 cut(s)	213, 912, 1208, 2208
Msp20I	TGGCCA	1 cut(s)	1170
MspA1I	CMGCKG	2 cut(s)	377, 1351
MspI	CCGG	2 cut(s)	680, 2261
MspR9I	CCNGG	4 cut(s)	95, 761, 1701, 2261
Mva1269I	GAATGC	2 cut(s)	901, 1584
MvaI	CCWGG	3 cut(s)	95, 761, 1701
MvnI	CGCG	2 cut(s)	72, 242
MwoI	GCNNNNNNNGC	8 cut(s)	518, 699, 923, 1354, 1638, 1792, 1865, 2298
NarI	GGCGCC	1 cut(s)	99
NciI	CCSGG	1 cut(s)	2261
NcoI	CCATGG	2 cut(s)	231, 1060
NdeI	CATATG	1 cut(s)	494
NdeII	GATC	7 cut(s)	696, 1264, 1547, 1696, 1729, 1968, 2238
NlaIV	GGNNCC	4 cut(s)	100, 229, 421, 1036
NmeAIII	GCCGAG	1 cut(s)	103
NmuCI	GTSAC	1 cut(s)	2081
NsiI	ATGCAT	1 cut(s)	1672
NspI	RCATGY	3 cut(s)	414, 820, 1429
NspV	TTCGAA	1 cut(s)	1394
PagI	TCATGA	1 cut(s)	208
PceI	AGGCCT	1 cut(s)	985
PciI	ACATGT	2 cut(s)	816, 1425
PciSI	GCTCTTC	2 cut(s)	193, 210
PctI	GAATGC	2 cut(s)	901, 1584
PdmI	GAANNNNTTC	3 cut(s)	461, 1257, 1400
PfeI	GAWTC	4 cut(s)	687, 782, 1806, 2357
PflMI	CCANNNNNTGG	1 cut(s)	1809
PfoI	TCCNGGA	1 cut(s)	1699
PleI	GAGTC	1 cut(s)	946
PluTI	GGCGCC	1 cut(s)	102
PpsI	GAGTC	1 cut(s)	946
PpuMI	RGGWCCY	1 cut(s)	420
PscI	ACATGT	2 cut(s)	816, 1425
Psp5II	RGGWCCY	1 cut(s)	420
Psp6I	CCWGG	3 cut(s)	93, 759, 1699
PspGI	CCWGG	3 cut(s)	93, 759, 1699
PspN4I	GGNNCC	4 cut(s)	100, 229, 421, 1036
PspPI	GGNCC	2 cut(s)	228, 420
PspPPI	RGGWCCY	1 cut(s)	420
PstI	CTGCAG	1 cut(s)	2200
PstNI	CAGNNNCTG	1 cut(s)	1809
PsuI	RGATCY	1 cut(s)	1264
RsaI	GTAC	6 cut(s)	281, 821, 1224, 1453, 1688, 1744
RsaNI	GTAC	6 cut(s)	280, 820, 1223, 1452, 1687, 1743
RseI	CAYNNNNRTG	4 cut(s)	213, 912, 1208, 2208
SapI	GCTCTTC	2 cut(s)	193, 210
SaqAI	TTAA	3 cut(s)	573, 708, 1619
Sau3AI	GATC	7 cut(s)	696, 1264, 1547, 1696, 1729, 1968, 2238
Sau96I	GGNCC	2 cut(s)	228, 420
SchI	GAGTC	1 cut(s)	947
ScrFI	CCNGG	4 cut(s)	95, 761, 1701, 2261
SduI	GDGCHC	4 cut(s)	84, 1039, 1604, 1713
SfcI	CTRYAG	1 cut(s)	2196
SfoI	GGCGCC	1 cut(s)	100
SfuI	TTCGAA	1 cut(s)	1394
SinI	GGWCC	2 cut(s)	228, 420
SmiMI	CAYNNNNRTG	4 cut(s)	213, 912, 1208, 2208
SmlI	CTYRAG	1 cut(s)	2024
SmoI	CTYRAG	1 cut(s)	2024
SseBI	AGGCCT	1 cut(s)	985
SsiI	CCGC	8 cut(s)	75, 102, 110, 141, 377, 831, 848, 1351
SspDI	GGCGCC	1 cut(s)	98
SspMI	CTAG	3 cut(s)	839, 1175, 1448
StuI	AGGCCT	1 cut(s)	985
StyD4I	CCNGG	4 cut(s)	93, 759, 1699, 2259
StyI	CCWWGG	6 cut(s)	231, 1060, 1248, 1887, 2166, 2361
TaaI	ACNGT	5 cut(s)	1420, 1691, 1718, 2147, 2210
TaiI	ACGT	5 cut(s)	489, 1162, 1917, 2076, 2109
TaqI	TCGA	5 cut(s)	64, 596, 723, 1394, 1647
TatI	WGTACW	1 cut(s)	1222
TauI	GCSGC	3 cut(s)	77, 104, 143
TfiI	GAWTC	4 cut(s)	687, 782, 1806, 2357
Tru1I	TTAA	3 cut(s)	573, 708, 1619
Tru9I	TTAA	3 cut(s)	573, 708, 1619
TscAI	CASTG	3 cut(s)	174, 645, 2215
TseFI	GTSAC	1 cut(s)	2081
TseI	GCWGC	7 cut(s)	374, 1137, 1348, 1792, 1868, 2016, 2309
Tsp45I	GTSAC	1 cut(s)	2081
TspGWI	ACGGA	4 cut(s)	326, 924, 1249, 1981
TspRI	CASTG	3 cut(s)	174, 645, 2215
Van91I	CCANNNNNTGG	1 cut(s)	1809
VpaK11BI	GGWCC	2 cut(s)	228, 420
XagI	CCTNNNNNAGG	1 cut(s)	1043
XapI	RAATTY	9 cut(s)	359, 592, 1006, 1148, 1186, 1359, 1411, 1973, 2191
XceI	RCATGY	3 cut(s)	414, 820, 1429
XcmI	CCANNNNNNNNNTGG	2 cut(s)	221, 2381
XmiI	GTMKAC	2 cut(s)	489, 835
XmnI	GAANNNNTTC	3 cut(s)	461, 1257, 1400
XspI	CTAG	3 cut(s)	839, 1175, 1448
Zsp2I	ATGCAT	1 cut(s)	1672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.