Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005359

Physical Location & Seq

Genomic Coordinates Forward (+)

16616437 .. 16621252

Gene Structure 4816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0120900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGGCGCCTTCATCTAATGATTCGTCATCATCGAATTCTAAACAATCCTCATCAACTTCTCCATCATCATCGTCATCTTCGAGCTCAAACTCTACACCATCTAATCAAGGGAATGGTAACTCTGAAGGCAACAATAACAATTCTGGAGGTAATAGCAATAACAATTCTGGAGGAAACAACAACAATTCTAGTGGGAACAACAATGGAAACGACAACTCTAGTGGGAATGGTAACTCTGGAGACAACAATGGGAACAAAGATTCAAGTGGGAAAAACAATTCTAGCGGGAACAGCAATTCTGGGCAGAACAACAACAACAACAACAACAACAATTCTGGACAGAATGACAACAGTAATTCTGGACAGAATAACAACAACAATTCTGGACAGAGCAGCAATTCTGGGCAAAATGGCAACAACAATTCTGGGCAAAATGGCAACAGCAACTCTGGACAAAACAACAACAACAACAACAACCAGAACAACAATGGCAACCAAAATAACAACGGCAACCAGAACAAAAACAACTCTGGACAAAATAATAACAATAACTCTGGACAAAACAACAACAATGGCGGGAATGGTAACTCACAGTCATCCCAAGGGAATCATCCACCACCACCACCACCCAAATCGCCCAGCAATTATTGGCATGCACCTCCACCACCGTCCAAAAAGTCCCCTCCAGCACCACCAGCTCTATCTAATAAAGACAATAAATCATCGTCCAGCTCACCTTCCTCGCCACTCATAATAGGACTTGCAGCTGGAGCAGGACTGTTGTTTGTCCTGGTTTTTCTTTTTTTGGCATGTTCTAGAAGGAGGAAGAAGCGACAGTCCTCACACCTCATGGATAACCCTGATCCTTATCGTCCTAATGGAAGTGAATACTGGCAAAGTGGAGCGTACAAACCCAATGAGCACGTTATGAACATGCCTCCAACTTCTGCATTATCTGGTTGGACTAACACAGGAGTGCATCAGCCACCCATGATTAGCAGCGAGATGAACTCCTCCAACTTCTCAGGCCCTCATGGCCCTTTACAACCCCCTCCACACCCTTCAGTGGCTCTCGGGTTCAACACGAGCACTTTCACTTATGATGACTTAGCAGTTGCGACTTCAGGGTTCTCCCAGGCCAAATTGTTGGGTCAAGGTGGGTTCGGGTATGTGCACAAAGGGGTGTTGCCAAATGGTAAAGAAATTGCTGTGAAAAGTCTCAAAGCAGGAAGTGGCCAAGGAGACCGAGAATTCGCAGCAGAGGTTGAGATTATTAGCCGTGTCCATCACCGCCACCTTGTCTCGCTTGTGGGATATTGCCTTAACGGAGACCGAAAATTGTTGGTTTATGAGTTTGTTCCAAATAACACCCTTGAGTTCCACCTTTACAATAAGAATCGTCCACCATTGGATTGGGCCTCGAGGGTCAAGATTGCGTTGGGATCTGCTAAAGGACTTGCTTACTTGCACGAAGATTGTCATCCAAAGATTATCCACCGTGACATTAAAGCAGCAAATATTTTAATTGACCATCACTTTGAAGCTAAGGTGGCAGATTTTGGGCTAGCAAAGCTAAACCAAGAAAACGTCACTCATGTGTCTACTCGTGTCATGGGGACATTCGGGTACTTGGCTCCTGAATACGCATCGAGTGGCAAGTTGACTGAGAAGTCTGATGTTTTCTCATTTGGTATCATGCTTCTCGAGCTGATTACTGGACGACGCCCAGTGGACACCACTGGAGAATATGAGGAGGACACCTTAGTAGACTGGGCTAGGCCTTTGCTATTGAAAGCAATAGAGGATGGGAACTACAGTGAGTTAGCTGATCCACGACTAGAAAATAAGTATGATCAGGAAGAGATTGCACGCATGGTTGCATGTGCGTCAACAAGCGTTCGGCATTCTGCAAAAAAGCGACCCAAAATGAGCCAGATTGTACGAGCACTAGAAGGAGATGTGTCGCTAGAGGACTTGCATGAAGGAATAAAACCTAGTCCCAGTGCTTTATTTGGTGGCTCTAATACTAGTTCTGAGTTTGATTCCGACTCATATAATGCTAACATGAAGAATTTTAGAAAGACGACATTGGGGGAAAGCCAAGACTATCCAAGCAGCGAATATGGGAACACCTCTAATAGCGAAGAGATGGTCAAGAAAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

721

Amino Acids

76.93

Weight (kDa)

6.86

Isoelectric Point (pI)

46.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	378 - 583	9.9e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	380 - 650	6e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52520 AT5G06280 AT5G06280
fragaria_vesca	FvH4_2g15690 FvH4_6g19940
malus_domestica	MD10G1128300.v1.1 MD12G1037000.v1.1 MD14G1036000.v1.1
prunus_persica	Prupe.6G139500_v2.0.a1 Prupe.8G169400_v2.0.a1
pyrus_communis	pycom05g11960 pycom10g10990 pycom11g14540 pycom12g03200
rosa_chinensis	RchiOBHm_Chr3g0488241 RchiOBHm_Chr6g0278991
rosa_laevigata	RLG00000013177
rosa_multiflora	Rmu_sc0002080.1_g000023 Rmu_sc0003852.1_g000009 Rmu_sc0004657.1_g000016
rosa_roxburghii	Rroxscaffold_3G00226150 Rroxscaffold_7G00189250
rosa_rugosa	Rorug06G0120900
rosa_samantha	Rh4AG251600 Rh6BG234700 Rh6DG228500 Rh7BG424900
rosa_wichuraiana	Rw3G018010 Rw6G020120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1669
AbsI	CCTCGAGG	1 cut(s)	1420
AccB1I	GGYRCC	1 cut(s)	4
AccI	GTMKAC	2 cut(s)	1601, 1767
AciI	CCGC	3 cut(s)	285, 576, 1291
AclWI	GGATC	3 cut(s)	857, 1450, 1823
AcoI	YGGCCR	1 cut(s)	1234
AcsI	RAATTY	3 cut(s)	34, 1250, 2071
AcuI	CTGAAG	3 cut(s)	144, 1047, 1107
AcyI	GRCGYC	2 cut(s)	5, 1723
AfaI	GTAC	3 cut(s)	908, 1628, 1941
AfiI	CCNNNNNNNGG	1 cut(s)	1066
AgsI	TTSAA	4 cut(s)	264, 1081, 1541, 1792
AhlI	ACTAGT	1 cut(s)	2027
AjnI	CCWGG	2 cut(s)	789, 1134
AleI	CACNNNNGTG	2 cut(s)	974, 1595
AluBI	AGCT	8 cut(s)	84, 698, 732, 767, 1544, 1573, 1708, 1826
AluI	AGCT	8 cut(s)	84, 698, 732, 767, 1544, 1573, 1708, 1826
Alw21I	GWGCWC	5 cut(s)	86, 924, 1091, 1176, 1948
Alw26I	GTCTC	5 cut(s)	234, 1223, 1236, 1306, 1323
Alw44I	GTGCAC	1 cut(s)	1172
AlwI	GGATC	3 cut(s)	857, 1450, 1823
Ama87I	CYCGRG	3 cut(s)	1073, 1420, 1703
AoxI	GGCC	6 cut(s)	1027, 1036, 1137, 1234, 1416, 1778
ApaLI	GTGCAC	1 cut(s)	1172
ApeKI	GCWGC	6 cut(s)	393, 764, 999, 1256, 1511, 2115
ApoI	RAATTY	3 cut(s)	34, 1250, 2071
ArsI	GACNNNNNNTTYG	5 cut(s)	1235, 1267, 1520, 1552, 2136
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	3 cut(s)	1028, 1037, 1416
AsuHPI	GGTGA	2 cut(s)	726, 1280
AsuNHI	GCTAGC	1 cut(s)	1564
AvaI	CYCGRG	3 cut(s)	1073, 1420, 1703
BaeGI	GKGCMC	1 cut(s)	1176
BalI	TGGCCA	1 cut(s)	1236
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	86
BauI	CACGAG	2 cut(s)	1084, 1605
Bbv12I	GWGCWC	5 cut(s)	86, 924, 1091, 1176, 1948
BbvI	GCAGC	6 cut(s)	405, 776, 1011, 1268, 1523, 2127
BccI	CCATC	6 cut(s)	70, 106, 1293, 1539, 1799, 2143
BceAI	ACGGC	2 cut(s)	523, 1263
BciT130I	CCWGG	2 cut(s)	791, 1136
BclI	TGATCA	1 cut(s)	1852
BcoDI	GTCTC	5 cut(s)	234, 1223, 1236, 1306, 1323
BcuI	ACTAGT	1 cut(s)	2027
BfmI	CTRYAG	1 cut(s)	1813
BfoI	RGCGCY	1 cut(s)	8
BglI	GCCNNNNNGGC	1 cut(s)	1035
BisI	GCNGC	6 cut(s)	394, 765, 1000, 1257, 1512, 2116
BlsI	GCNGC	6 cut(s)	395, 766, 1001, 1258, 1513, 2117
Bme1390I	CCNGG	2 cut(s)	791, 1136
BmeT110I	CYCGRG	3 cut(s)	1073, 1420, 1703
BmgT120I	GGNCC	3 cut(s)	1028, 1037, 1416
BmiI	GGNNCC	2 cut(s)	6, 1635
BmrFI	CCNGG	2 cut(s)	791, 1136
BmrI	ACTGGG	3 cut(s)	1721, 1780, 1995
BmsI	GCATC	2 cut(s)	988, 1655
BmtI	GCTAGC	1 cut(s)	1568
BmuI	ACTGGG	3 cut(s)	1721, 1780, 1995
BplI	GAGNNNNNCTC	2 cut(s)	995, 1027
BpmI	CTGGAG	6 cut(s)	165, 189, 258, 669, 789, 1761
Bpu10I	CCTNAGC	1 cut(s)	1545
BpuEI	CTTGAG	1 cut(s)	1394
BsaBI	GATNNNNATC	2 cut(s)	867, 1479
BsaHI	GRCGYC	2 cut(s)	5, 1723
BsaI	GGTCTC	2 cut(s)	1236, 1323
BsaJI	CCNNGG	3 cut(s)	601, 1134, 1237
Bsc4I	CCNNNNNNNGG	1 cut(s)	1066
Bse1I	ACTGG	6 cut(s)	896, 1720, 1727, 1744, 1775, 2001
Bse8I	GATNNNNATC	2 cut(s)	867, 1479
BseBI	CCWGG	2 cut(s)	791, 1136
BseDI	CCNNGG	3 cut(s)	601, 1134, 1237
BseGI	GGATG	4 cut(s)	596, 610, 1480, 1810
BseJI	GATNNNNATC	2 cut(s)	867, 1479
BseLI	CCNNNNNNNGG	1 cut(s)	1066
BseMII	CTCAG	3 cut(s)	1038, 1656, 2025
BseNI	ACTGG	6 cut(s)	896, 1720, 1727, 1744, 1775, 2001
BseRI	GAGGAG	2 cut(s)	1003, 1766
BseSI	GKGCMC	1 cut(s)	1176
BseXI	GCAGC	6 cut(s)	405, 776, 1011, 1268, 1523, 2127
BseYI	CCCAGC	1 cut(s)	638
BshFI	GGCC	6 cut(s)	1029, 1038, 1139, 1236, 1418, 1780
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	5 cut(s)	86, 924, 1091, 1176, 1948
BsiHKCI	CYCGRG	3 cut(s)	1073, 1420, 1703
BslFI	GGGAC	3 cut(s)	664, 1630, 1983
BslI	CCNNNNNNNGG	1 cut(s)	1066
BsmAI	GTCTC	5 cut(s)	234, 1223, 1236, 1306, 1323
BsmFI	GGGAC	3 cut(s)	664, 1630, 1983
BsmI	GAATGC	1 cut(s)	1903
BsnI	GGCC	6 cut(s)	1029, 1038, 1139, 1236, 1418, 1780
Bso31I	GGTCTC	2 cut(s)	1236, 1323
BsoBI	CYCGRG	3 cut(s)	1073, 1420, 1703
Bsp1286I	GDGCHC	5 cut(s)	86, 924, 1091, 1176, 1948
Bsp143I	GATC	4 cut(s)	862, 1442, 1828, 1852
BspACI	CCGC	3 cut(s)	285, 576, 1291
BspANI	GGCC	6 cut(s)	1029, 1038, 1139, 1236, 1418, 1780
BspCNI	CTCAG	3 cut(s)	1037, 1657, 2026
BspLI	GGNNCC	2 cut(s)	6, 1635
BspOI	GCTAGC	1 cut(s)	1568
BspPI	GGATC	3 cut(s)	857, 1450, 1823
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	2 cut(s)	1236, 1323
BsrI	ACTGG	6 cut(s)	896, 1720, 1727, 1744, 1775, 2001
BssECI	CCNNGG	3 cut(s)	601, 1134, 1237
BssMI	GATC	4 cut(s)	862, 1442, 1828, 1852
BssNI	GRCGYC	2 cut(s)	5, 1723
BssSI	CACGAG	2 cut(s)	1084, 1605
BssT1I	CCWWGG	2 cut(s)	601, 1237
Bst2BI	CACGAG	2 cut(s)	1084, 1605
Bst2UI	CCWGG	2 cut(s)	791, 1136
Bst4CI	ACNGT	7 cut(s)	353, 594, 669, 780, 837, 1499, 1817
Bst6I	CTCTTC	2 cut(s)	1854, 2139
BstACI	GRCGYC	2 cut(s)	5, 1723
BstC8I	GCNNGC	3 cut(s)	654, 1566, 1870
BstDEI	CTNAG	6 cut(s)	1024, 1108, 1545, 1665, 1762, 2034
BstF5I	GGATG	4 cut(s)	596, 610, 1480, 1810
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstKTI	GATC	4 cut(s)	865, 1445, 1831, 1855
BstMAI	GTCTC	5 cut(s)	234, 1223, 1236, 1306, 1323
BstMBI	GATC	4 cut(s)	862, 1442, 1828, 1852
BstMWI	GCNNNNNNNGC	7 cut(s)	291, 695, 770, 1035, 1550, 1570, 1705
BstNI	CCWGG	2 cut(s)	791, 1136
BstNSI	RCATGY	4 cut(s)	656, 813, 937, 1884
BstSCI	CCNGG	2 cut(s)	789, 1134
BstSFI	CTRYAG	1 cut(s)	1813
BstSLI	GKGCMC	1 cut(s)	1176
BstV1I	GCAGC	6 cut(s)	405, 776, 1011, 1268, 1523, 2127
BstX2I	RGATCY	1 cut(s)	1442
BstXI	CCANNNNNNTGG	2 cut(s)	1147, 1413
BstYI	RGATCY	1 cut(s)	1442
BsuRI	GGCC	6 cut(s)	1029, 1038, 1139, 1236, 1418, 1780
BtsCI	GGATG	4 cut(s)	596, 610, 1480, 1810
BtsIMutI	CAGTG	5 cut(s)	1071, 1734, 1737, 1822, 2008
Cac8I	GCNNGC	3 cut(s)	654, 1566, 1870
CfoI	GCGC	1 cut(s)	7
Cfr13I	GGNCC	3 cut(s)	1028, 1037, 1416
CseI	GACGC	2 cut(s)	1731, 1875
Csp6I	GTAC	3 cut(s)	907, 1627, 1940
CspCI	CAANNNNNGTGG	4 cut(s)	172, 202, 207, 237
CviQI	GTAC	3 cut(s)	907, 1627, 1940
DdeI	CTNAG	6 cut(s)	1024, 1108, 1545, 1665, 1762, 2034
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	4 cut(s)	864, 1444, 1830, 1854
DpnII	GATC	4 cut(s)	862, 1442, 1828, 1852
DrdI	GACNNNNNNGTC	1 cut(s)	1669
DseDI	GACNNNNNNGTC	1 cut(s)	1669
EaeI	YGGCCR	1 cut(s)	1234
Eam1104I	CTCTTC	2 cut(s)	1854, 2139
EarI	CTCTTC	2 cut(s)	1854, 2139
Ecl136II	GAGCTC	1 cut(s)	84
Eco130I	CCWWGG	2 cut(s)	601, 1237
Eco147I	AGGCCT	1 cut(s)	1780
Eco24I	GRGCYC	1 cut(s)	86
Eco31I	GGTCTC	2 cut(s)	1236, 1323
Eco53kI	GAGCTC	1 cut(s)	84
Eco57I	CTGAAG	3 cut(s)	144, 1047, 1107
Eco88I	CYCGRG	3 cut(s)	1073, 1420, 1703
EcoICRI	GAGCTC	1 cut(s)	84
EcoO109I	RGGNCCY	1 cut(s)	1028
EcoRI	GAATTC	2 cut(s)	34, 1250
EcoRII	CCWGG	2 cut(s)	789, 1134
EcoT14I	CCWWGG	2 cut(s)	601, 1237
EcoT38I	GRGCYC	1 cut(s)	86
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	601, 1237
FaqI	GGGAC	3 cut(s)	664, 1630, 1983
FauI	CCCGC	2 cut(s)	278, 569
FbaI	TGATCA	1 cut(s)	1852
FblI	GTMKAC	2 cut(s)	1601, 1767
Fnu4HI	GCNGC	6 cut(s)	394, 765, 1000, 1257, 1512, 2116
FokI	GGATG	4 cut(s)	583, 597, 1467, 1817
FriOI	GRGCYC	1 cut(s)	86
Fsp4HI	GCNGC	6 cut(s)	394, 765, 1000, 1257, 1512, 2116
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	6 cut(s)	394, 765, 1000, 1257, 1512, 2116
GsaI	CCCAGC	1 cut(s)	642
GsuI	CTGGAG	6 cut(s)	165, 189, 258, 669, 789, 1761
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	6 cut(s)	1029, 1038, 1139, 1236, 1418, 1780
HgaI	GACGC	2 cut(s)	1731, 1875
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	2 cut(s)	5, 1723
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	2 cut(s)	1662, 1890
HindII	GTYRAC	2 cut(s)	1662, 1890
HinfI	GANTC	6 cut(s)	20, 260, 607, 1396, 2042, 2048
HphI	GGTGA	2 cut(s)	726, 1280
Hpy166II	GTNNAC	7 cut(s)	1174, 1403, 1602, 1662, 1732, 1768, 1890
Hpy188I	TCNGA	4 cut(s)	124, 1675, 2035, 2047
Hpy8I	GTNNAC	7 cut(s)	1174, 1403, 1602, 1662, 1732, 1768, 1890
Hpy99I	CGWCG	1 cut(s)	1725
HpyAV	CCTTC	7 cut(s)	18, 119, 747, 813, 1071, 1946, 1976
HpyCH4III	ACNGT	7 cut(s)	353, 594, 669, 780, 837, 1499, 1817
HpyCH4IV	ACGT	2 cut(s)	924, 1587
HpyF10VI	GCNNNNNNNGC	7 cut(s)	291, 695, 770, 1035, 1550, 1570, 1705
HpyF3I	CTNAG	6 cut(s)	1024, 1108, 1545, 1665, 1762, 2034
HpySE526I	ACGT	2 cut(s)	924, 1587
Hsp92I	GRCGYC	2 cut(s)	5, 1723
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	1852
Kzo9I	GATC	4 cut(s)	862, 1442, 1828, 1852
LmnI	GCTCC	3 cut(s)	770, 902, 1639
Lsp1109I	GCAGC	6 cut(s)	405, 776, 1011, 1268, 1523, 2127
LweI	GCATC	2 cut(s)	988, 1655
MaeII	ACGT	2 cut(s)	924, 1587
MaeIII	GTNAC	5 cut(s)	116, 230, 584, 1499, 1588
MalI	GATC	4 cut(s)	864, 1444, 1830, 1854
MboI	GATC	4 cut(s)	862, 1442, 1828, 1852
MboII	GAAGA	6 cut(s)	69, 838, 1484, 1871, 2080, 2156
MflI	RGATCY	1 cut(s)	1442
MhlI	GDGCHC	5 cut(s)	86, 924, 1091, 1176, 1948
MlsI	TGGCCA	1 cut(s)	1236
MluNI	TGGCCA	1 cut(s)	1236
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	2042
MmeI	TCCRAC	4 cut(s)	941, 965, 1041, 2070
Mox20I	TGGCCA	1 cut(s)	1236
MscI	TGGCCA	1 cut(s)	1236
MseI	TTAA	3 cut(s)	1323, 1506, 1523
MslI	CAYNNNNRTG	2 cut(s)	974, 1595
Msp20I	TGGCCA	1 cut(s)	1236
MspA1I	CMGCKG	1 cut(s)	767
MspR9I	CCNGG	2 cut(s)	791, 1136
Mva1269I	GAATGC	1 cut(s)	1903
MvaI	CCWGG	2 cut(s)	791, 1136
MwoI	GCNNNNNNNGC	7 cut(s)	291, 695, 770, 1035, 1550, 1570, 1705
NarI	GGCGCC	1 cut(s)	5
NdeII	GATC	4 cut(s)	862, 1442, 1828, 1852
NheI	GCTAGC	1 cut(s)	1564
NlaIV	GGNNCC	2 cut(s)	6, 1635
NmuCI	GTSAC	2 cut(s)	1499, 1588
NspI	RCATGY	4 cut(s)	656, 813, 937, 1884
OliI	CACNNNNGTG	2 cut(s)	974, 1595
PaeI	GCATGC	1 cut(s)	656
PaeR7I	CTCGAG	2 cut(s)	1420, 1703
PceI	AGGCCT	1 cut(s)	1780
PcsI	WCGNNNNNNNCGW	2 cut(s)	29, 77
PctI	GAATGC	1 cut(s)	1903
PfeI	GAWTC	5 cut(s)	20, 260, 607, 1396, 2042
PkrI	GCNGC	6 cut(s)	395, 766, 1001, 1258, 1513, 2117
PleI	GAGTC	1 cut(s)	2042
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	1 cut(s)	2042
Psp124BI	GAGCTC	1 cut(s)	86
Psp6I	CCWGG	2 cut(s)	789, 1134
PspFI	CCCAGC	1 cut(s)	638
PspGI	CCWGG	2 cut(s)	789, 1134
PspN4I	GGNNCC	2 cut(s)	6, 1635
PspPI	GGNCC	3 cut(s)	1028, 1037, 1416
PspXI	VCTCGAGB	1 cut(s)	1420
PsuI	RGATCY	1 cut(s)	1442
PvuII	CAGCTG	1 cut(s)	767
RsaI	GTAC	3 cut(s)	908, 1628, 1941
RsaNI	GTAC	3 cut(s)	907, 1627, 1940
RseI	CAYNNNNRTG	2 cut(s)	974, 1595
SacI	GAGCTC	1 cut(s)	86
SaqAI	TTAA	3 cut(s)	1323, 1506, 1523
SatI	GCNGC	6 cut(s)	394, 765, 1000, 1257, 1512, 2116
Sau3AI	GATC	4 cut(s)	862, 1442, 1828, 1852
Sau96I	GGNCC	3 cut(s)	1028, 1037, 1416
SchI	GAGTC	1 cut(s)	2042
ScrFI	CCNGG	2 cut(s)	791, 1136
SduI	GDGCHC	5 cut(s)	86, 924, 1091, 1176, 1948
SfaNI	GCATC	2 cut(s)	988, 1655
SfcI	CTRYAG	1 cut(s)	1813
SfiI	GGCCNNNNNGGCC	1 cut(s)	1035
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	2 cut(s)	1420, 1703
SlaI	CTCGAG	2 cut(s)	1420, 1703
SmiMI	CAYNNNNRTG	2 cut(s)	974, 1595
SmlI	CTYRAG	3 cut(s)	1373, 1420, 1703
SmoI	CTYRAG	3 cut(s)	1373, 1420, 1703
SpeI	ACTAGT	1 cut(s)	2027
SphI	GCATGC	1 cut(s)	656
SseBI	AGGCCT	1 cut(s)	1780
SsiI	CCGC	3 cut(s)	285, 576, 1291
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1519
SstI	GAGCTC	1 cut(s)	86
StuI	AGGCCT	1 cut(s)	1780
StyD4I	CCNGG	2 cut(s)	789, 1134
StyI	CCWWGG	2 cut(s)	601, 1237
TaaI	ACNGT	7 cut(s)	353, 594, 669, 780, 837, 1499, 1817
TaiI	ACGT	2 cut(s)	927, 1590
TaqI	TCGA	5 cut(s)	32, 80, 1421, 1649, 1704
TaqII	GACCGA	2 cut(s)	1260, 1347
TfiI	GAWTC	5 cut(s)	20, 260, 607, 1396, 2042
Tru1I	TTAA	3 cut(s)	1323, 1506, 1523
Tru9I	TTAA	3 cut(s)	1323, 1506, 1523
TscAI	CASTG	5 cut(s)	1071, 1734, 1744, 1822, 2008
TseFI	GTSAC	2 cut(s)	1499, 1588
TseI	GCWGC	6 cut(s)	393, 764, 999, 1256, 1511, 2115
Tsp45I	GTSAC	2 cut(s)	1499, 1588
TspDTI	ATGAA	4 cut(s)	944, 1022, 1995, 2081
TspGWI	ACGGA	1 cut(s)	1341
TspRI	CASTG	5 cut(s)	1071, 1734, 1744, 1822, 2008
VneI	GTGCAC	1 cut(s)	1172
XapI	RAATTY	3 cut(s)	34, 1250, 2071
XbaI	TCTAGA	1 cut(s)	815
XceI	RCATGY	4 cut(s)	656, 813, 937, 1884
XcmI	CCANNNNNNNNNTGG	2 cut(s)	485, 1410
XhoI	CTCGAG	2 cut(s)	1420, 1703
XmiI	GTMKAC	2 cut(s)	1601, 1767

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.