Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0012203

Physical Location & Seq

Genomic Coordinates Reverse (-)

24900745 .. 24903168

Gene Structure 2424 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1126100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGCTGCAACTCTCGCTCACAGTCACAACTCTTACCTCTACAACTCCACCTCCCCGCCACCGAGCCTTTTACGAAAACGAGCCGCTGAGCCGAAAGCAAACCAAAGCTCCGACCAGCCGAAGTTTCCTAAGTTGGTTCGTGGAATCCGAAAACTATCGAAGAATCCGAGCACCTCGATTGAACCCCTCAACAACTATGCGCTCAAACAGGCTCTTCAAGAGCATGTGGAATCTGGGTCCATAGAGGATGCACTCCGGGTGTTTGAGAAAATGTCCCATTCAGATACGTATTACTGGAATGTTATGATTAGAGGTCTCGCTGATAATGGGTTGTTCCGGGAGGCGATTGGTTTTTATCATAGGATGCAAAGGGAAGGTGTTCGAGCTGATAATTATACCTACCCATTTGTGATCAAGGCATGTGGTGGGTTGTTGTCGTTGGATGAAGGACAAAAGGTTCATGGGAAGTTGTTTAAGGTCGGGTTGGATTTGGATGTTTATATCGGTAACTCGCTTTGTGCTGCGTATGCAAAACTTGGTTGCATAGAGTATGCAGAGAGAGTGTTTGACGAAATGCCTGTTAAAGACTTGGTTTCTTGGAATTCTATGATTGGCGGGTATGCTGCTGTTGGGGATGGTTGGAGGGCGATGGTTTGTTTTCAGGAAATGCAGGTGCTGGGTATGAAGCCTGATAGATTCAGTATGATTGGCGGTCTTAACGCTTGTGCTATTGATTGCTTTCTCCAACCCGGGAAGGAAATCCATTGCCAGGTTCTTAAATGTATGCTTGAATCGGATGTCATGGTTCACACCTCGCTTATTGACATGTACCACAAATGTGGTAGAGTGGACTATGCAGAGAGGTTGTTTGATGAGATTTGCACCAAGAATGTTGTGGTTTGGAATGCAATGATACATGGGTATACTCTAAATGCTCGGCCGCTTGAGTCACTTTCTTGCTTGAAAAAAATGCAAGAGGCAGATAAGCTGATTCCTGATGCTATCACAATGATCAATTTTCTTCCCTCTTGCACACAACTAGGAGCCCTATTGGAAGGTAAATCAATCCATGGCTATGCCATTAGACGAGGTTTTCTCCCTCATATTGTATTCGAAACTGCACTGATTGATTTGTATGGTGCCTGCGGCAGGATAAATTTGGCAGAACGTATGTTTGGTCAGCTAATTGAAAAGAACTTGATATCGTGGAATAGCATGATTTCTGCATATGTACAAAGTGGACATAACAGGGAAGCCTTGGAATTATTTTGGGATCTCTTGAATGAACCGCTTGAACCGGATGCAATTACATTTTCAAGCATCATACCTGCCTATTGTGAAGTAGCATCCATTGGGGAGCGGAAGCAAATTCATGGTTGTATCACAAAATTGGAGCACAACTCAAATACCTTAATCTTGAATGCAACTGTTTACATGTATGCAAAATGTGGGTATCTGGAGATGGCGCGAGAAGTTTTTGATAGGATGATATTCAGGGATGCCAGTTCGTGGAACACTATAATTATGGCTTATGCAATTCATGGGTTTGGGAGAATATCCATCGAGTTTTTCTCCAAAATGAGAGACAACGGCATTCAGCCTAATGAGAGCACATTTGTTTCCTTGTTAACGGCGTGTAGTGTTTCTGGCATGGTTGACGAGGGTTGGAAATACTATAACTCGATGAAAAGAGACTATGGTATTGATCCTGGAATAGAGCACTGTGGTTGTATGATCGATCTTCTTGGTCGAACAGGTAATCTTGATCGTGCCAAGATTTTTATCGAGGAAATGTCGCTGCTGCCCACAGCCAGAATTTGGGGGTCATTACTGACAGCTAGTAGAAACAACAGAAACATAGAGTTAGCTGAACTTGCTGCTGAGCATATTTTGTCCTCGGAACATGATAATACCGGGTGTTATATCTTGCTTGCGAATATGTATTCTGAAGCTGGGAGGTGGGAAGATGTAGAACGGCTTAAATCTCATATGAAGCAAAGAGGACTCCGGAAAACTGTCGCGTGCAGCTTTGTTGAGACCAAATGTAGGCCTTACAGATTCATCAACCAAGATACGACCCACGTTGAAACCTACATGATTTATGCTGTTTTAGATTTGATTCTGAGGAAGATAGGGGAAGATAAATATGTTCATAGTATCACCAAGTTCAGACCGATGGATTTGAAGAGAAAGAGAGCAAATTCCGCAGAGAGTCACAGTGTAAGATTGGCAATTTGTTTTGGTTTGATCTCCACAGAAATCAGACGCCCCGTTGTTGTTAGGAAGAACACGAGAATCTGTGAAGAATGCCATAGCGCTGCAAAGAAGATTTCAGAGATCACCAAGAGAGAGATAATTGTAGGAGATTCGAAGGTCTTTCACCACTTCATTGACGGCAATTGCTCTTGTCGTGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

808

Amino Acids

91.49

Weight (kDa)

7.7

Isoelectric Point (pI)

46.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	95 - 141	3.5e-10	PPR repeat family
PPR	PF01535	99 - 127	1.6e-06	PPR repeat
PPR_2	PF13041	196 - 236	2.1e-06	PPR repeat family
PPR_2	PF13041	399 - 446	1.6e-10	PPR repeat family
PPR_2	PF13041	500 - 546	2.6e-08	PPR repeat family
E_motif	PF20431	619 - 679	1.1e-17	E motif
DYW_deaminase	PF14432	735 - 807	1.6e-23	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35130
fragaria_vesca	FvH4_2g15700
malus_domestica	MD05G1126100.v1.1 MD10G1128900.v1.1
prunus_persica	Prupe.8G169500_v2.0.a1
pyrus_communis	pycom05g12020 pycom05g12050 pycom05g12170 pycom10g11050
rosa_chinensis	RchiOBHm_Chr6g0279001
rosa_laevigata	RLG00000013176
rosa_multiflora	Rmu_sc0002080.1_g000022
rosa_roxburghii	Rroxscaffold_7G00189240
rosa_rugosa	Rorug06G0120900
rosa_samantha	Rh6AG229800 Rh6BG234800 Rh6CG236900 Rh6DG228600
rosa_wichuraiana	Rw6G020130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	661
Acc36I	ACCTGC	2 cut(s)	661, 1336
AccB1I	GGYRCC	1 cut(s)	1139
AccB7I	CCANNNNNTGG	2 cut(s)	1509, 1818
AccBSI	CCGCTC	1 cut(s)	1360
AccI	GTMKAC	1 cut(s)	923
AccII	CGCG	2 cut(s)	1468, 2021
AccIII	TCCGGA	1 cut(s)	2007
AciI	CCGC	9 cut(s)	56, 84, 615, 711, 941, 1146, 1289, 1360, 2205
AclWI	GGATC	2 cut(s)	1281, 1700
AcoI	YGGCCR	1 cut(s)	938
AcsI	RAATTY	5 cut(s)	601, 1156, 1368, 1815, 2200
AcuI	CTGAAG	1 cut(s)	1968
AcyI	GRCGYC	1 cut(s)	2266
AfaI	GTAC	2 cut(s)	830, 1233
AfeI	AGCGCT	1 cut(s)	2317
AfiI	CCNNNNNNNGG	5 cut(s)	769, 1149, 1509, 1818, 2046
AflIII	ACRYGT	2 cut(s)	825, 1434
AjnI	CCWGG	2 cut(s)	768, 1708
AjuI	GAANNNNNNNTTGG	2 cut(s)	1158, 1190
AleI	CACNNNNGTG	1 cut(s)	837
AloI	GAACNNNNNNTCC	2 cut(s)	441, 473
AluBI	AGCT	8 cut(s)	108, 386, 988, 1183, 1838, 1868, 1952, 2028
AluI	AGCT	8 cut(s)	108, 386, 988, 1183, 1838, 1868, 1952, 2028
Alw21I	GWGCWC	4 cut(s)	173, 1398, 1613, 1722
Alw26I	GTCTC	4 cut(s)	320, 1578, 1686, 2030
AlwI	GGATC	2 cut(s)	1281, 1700
AlwNI	CAGNNNCTG	1 cut(s)	676
Ama87I	CYCGRG	1 cut(s)	749
Aor13HI	TCCGGA	1 cut(s)	2007
Aor51HI	AGCGCT	1 cut(s)	2317
AoxI	GGCC	2 cut(s)	938, 2048
ApeKI	GCWGC	8 cut(s)	5, 521, 623, 1798, 1801, 1877, 2025, 2318
ApoI	RAATTY	5 cut(s)	601, 1156, 1368, 1815, 2200
Asp700I	GAANNNNTTC	1 cut(s)	378
AspLEI	GCGC	3 cut(s)	202, 1468, 2318
AspS9I	GGNCC	1 cut(s)	237
AsuC2I	CCSGG	5 cut(s)	257, 338, 750, 751, 1915
AsuHPI	GGTGA	3 cut(s)	2152, 2332, 2372
AsuII	TTCGAA	2 cut(s)	1113, 2369
AvaI	CYCGRG	1 cut(s)	749
AvaII	GGWCC	1 cut(s)	237
BaeI	ACNNNNGTAYC	2 cut(s)	905, 938
BanI	GGYRCC	1 cut(s)	1139
BanII	GRGCYC	1 cut(s)	1048
BauI	CACGAG	1 cut(s)	2290
Bbv12I	GWGCWC	4 cut(s)	173, 1398, 1613, 1722
BbvI	GCAGC	7 cut(s)	508, 610, 1785, 1788, 1864, 2037, 2305
BccI	CCATC	5 cut(s)	629, 643, 1456, 1568, 2170
BceAI	ACGGC	4 cut(s)	1606, 1647, 1991, 2410
BciT130I	CCWGG	2 cut(s)	770, 1710
BclI	TGATCA	2 cut(s)	411, 1011
BcnI	CCSGG	5 cut(s)	257, 338, 750, 751, 1915
BcoDI	GTCTC	4 cut(s)	320, 1578, 1686, 2030
BfaI	CTAG	2 cut(s)	1040, 1839
BfoI	RGCGCY	1 cut(s)	2319
BfuAI	ACCTGC	2 cut(s)	661, 1336
BlpI	GCTNAGC	2 cut(s)	87, 1881
Bme1390I	CCNGG	7 cut(s)	257, 338, 750, 751, 770, 1710, 1915
Bme18I	GGWCC	1 cut(s)	237
BmeT110I	CYCGRG	1 cut(s)	749
BmgT120I	GGNCC	1 cut(s)	237
BmiI	GGNNCC	3 cut(s)	238, 1045, 1141
BmrFI	CCNGG	7 cut(s)	257, 338, 750, 751, 770, 1710, 1915
BmsI	GCATC	7 cut(s)	238, 354, 988, 1291, 1329, 1355, 1489
BplI	GAGNNNNNCTC	6 cut(s)	1080, 1112, 1385, 1417, 1556, 1588
BpmI	CTGGAG	1 cut(s)	1478
Bpu1102I	GCTNAGC	2 cut(s)	87, 1881
Bpu14I	TTCGAA	2 cut(s)	1113, 2369
BpuEI	CTTGAG	1 cut(s)	965
BpuMI	CCSGG	5 cut(s)	257, 338, 750, 751, 1915
Bsa29I	ATCGAT	1 cut(s)	1737
BsaAI	YACGTR	1 cut(s)	288
BsaBI	GATNNNNATC	1 cut(s)	1781
BsaHI	GRCGYC	1 cut(s)	2266
BsaI	GGTCTC	2 cut(s)	320, 2030
BsaJI	CCNNGG	4 cut(s)	749, 1069, 1257, 1896
BsaWI	WCCGGW	2 cut(s)	1297, 2007
BsaXI	ACNNNNNCTCC	4 cut(s)	35, 65, 92, 122
Bsc4I	CCNNNNNNNGG	5 cut(s)	769, 1149, 1509, 1818, 2046
Bse1I	ACTGG	3 cut(s)	299, 1503, 2423
Bse3DI	GCAATG	2 cut(s)	763, 915
Bse8I	GATNNNNATC	1 cut(s)	1781
BseAI	TCCGGA	1 cut(s)	2007
BseBI	CCWGG	2 cut(s)	770, 1710
BseCI	ATCGAT	1 cut(s)	1737
BseDI	CCNNGG	4 cut(s)	749, 1069, 1257, 1896
BseJI	GATNNNNATC	1 cut(s)	1781
BseLI	CCNNNNNNNGG	5 cut(s)	769, 1149, 1509, 1818, 2046
BseMI	GCAATG	2 cut(s)	763, 915
BseMII	CTCAG	3 cut(s)	78, 1872, 2114
BseNI	ACTGG	3 cut(s)	299, 1503, 2423
BseX3I	CGGCCG	1 cut(s)	938
BseXI	GCAGC	7 cut(s)	508, 610, 1785, 1788, 1864, 2037, 2305
BseYI	CCCAGC	2 cut(s)	676, 1952
BsgI	GTGCAG	2 cut(s)	1104, 2044
Bsh1236I	CGCG	2 cut(s)	1468, 2021
Bsh1285I	CGRYCG	1 cut(s)	941
BshFI	GGCC	2 cut(s)	940, 2050
BshNI	GGYRCC	1 cut(s)	1139
BshVI	ATCGAT	1 cut(s)	1737
BsiEI	CGRYCG	1 cut(s)	941
BsiHKAI	GWGCWC	4 cut(s)	173, 1398, 1613, 1722
BsiHKCI	CYCGRG	1 cut(s)	749
BsiSI	CCGG	6 cut(s)	256, 337, 750, 1298, 1914, 2008
BslFI	GGGAC	1 cut(s)	259
BslI	CCNNNNNNNGG	5 cut(s)	769, 1149, 1509, 1818, 2046
BsmAI	GTCTC	4 cut(s)	320, 1578, 1686, 2030
BsmFI	GGGAC	1 cut(s)	259
BsmI	GAATGC	4 cut(s)	910, 1426, 1593, 2312
BsnI	GGCC	2 cut(s)	940, 2050
Bso31I	GGTCTC	2 cut(s)	320, 2030
BsoBI	CYCGRG	1 cut(s)	749
Bsp119I	TTCGAA	2 cut(s)	1113, 2369
Bsp1286I	GDGCHC	5 cut(s)	173, 1048, 1398, 1613, 1722
Bsp13I	TCCGGA	1 cut(s)	2007
Bsp1407I	TGTACA	1 cut(s)	1231
Bsp143I	GATC	9 cut(s)	411, 1011, 1273, 1705, 1734, 1738, 1765, 2247, 2337
Bsp1720I	GCTNAGC	2 cut(s)	87, 1881
Bsp19I	CCATGG	1 cut(s)	1069
BspACI	CCGC	9 cut(s)	56, 84, 615, 711, 941, 1146, 1289, 1360, 2205
BspANI	GGCC	2 cut(s)	940, 2050
BspCNI	CTCAG	3 cut(s)	79, 1873, 2115
BspDI	ATCGAT	1 cut(s)	1737
BspEI	TCCGGA	1 cut(s)	2007
BspFNI	CGCG	2 cut(s)	1468, 2021
BspLI	GGNNCC	3 cut(s)	238, 1045, 1141
BspMI	ACCTGC	2 cut(s)	661, 1336
BspPI	GGATC	2 cut(s)	1281, 1700
BspQI	GCTCTTC	1 cut(s)	219
BspT104I	TTCGAA	2 cut(s)	1113, 2369
BspT107I	GGYRCC	1 cut(s)	1139
BspTNI	GGTCTC	2 cut(s)	320, 2030
BsrBI	CCGCTC	1 cut(s)	1360
BsrDI	GCAATG	2 cut(s)	763, 915
BsrGI	TGTACA	1 cut(s)	1231
BsrI	ACTGG	3 cut(s)	299, 1503, 2423
BssECI	CCNNGG	4 cut(s)	749, 1069, 1257, 1896
BssMI	GATC	9 cut(s)	411, 1011, 1273, 1705, 1734, 1738, 1765, 2247, 2337
BssNAI	GTATAC	1 cut(s)	924
BssNI	GRCGYC	1 cut(s)	2266
BssSI	CACGAG	1 cut(s)	2290
BssT1I	CCWWGG	2 cut(s)	1069, 1257
Bst1107I	GTATAC	1 cut(s)	924
Bst2BI	CACGAG	1 cut(s)	2290
Bst2UI	CCWGG	2 cut(s)	770, 1710
Bst4CI	ACNGT	5 cut(s)	23, 1429, 1724, 2017, 2219
Bst6I	CTCTTC	2 cut(s)	219, 2180
BstACI	GRCGYC	1 cut(s)	2266
BstAUI	TGTACA	1 cut(s)	1231
BstBAI	YACGTR	1 cut(s)	288
BstBI	TTCGAA	2 cut(s)	1113, 2369
BstC8I	GCNNGC	3 cut(s)	1144, 1932, 2023
BstDEI	CTNAG	4 cut(s)	87, 129, 1881, 2123
BstDSI	CCRYGG	1 cut(s)	1069
BstENI	CCTNNNNNAGG	1 cut(s)	1147
BstFNI	CGCG	2 cut(s)	1468, 2021
BstH2I	RGCGCY	1 cut(s)	2319
BstHHI	GCGC	3 cut(s)	202, 1468, 2318
BstKTI	GATC	9 cut(s)	414, 1014, 1276, 1708, 1737, 1741, 1768, 2250, 2340
BstMAI	GTCTC	4 cut(s)	320, 1578, 1686, 2030
BstMBI	GATC	9 cut(s)	411, 1011, 1273, 1705, 1734, 1738, 1765, 2247, 2337
BstMCI	CGRYCG	1 cut(s)	941
BstMWI	GCNNNNNNNGC	4 cut(s)	14, 527, 1874, 2204
BstNI	CCWGG	2 cut(s)	770, 1710
BstNSI	RCATGY	4 cut(s)	227, 423, 829, 1438
BstSCI	CCNGG	7 cut(s)	255, 336, 748, 749, 768, 1708, 1913
BstSNI	TACGTA	1 cut(s)	288
BstUI	CGCG	2 cut(s)	1468, 2021
BstV1I	GCAGC	7 cut(s)	508, 610, 1785, 1788, 1864, 2037, 2305
BstX2I	RGATCY	1 cut(s)	1273
BstXI	CCANNNNNNTGG	1 cut(s)	839
BstYI	RGATCY	1 cut(s)	1273
BstZ17I	GTATAC	1 cut(s)	924
BstZI	CGGCCG	1 cut(s)	938
Bsu15I	ATCGAT	1 cut(s)	1737
BsuRI	GGCC	2 cut(s)	940, 2050
BsuTUI	ATCGAT	1 cut(s)	1737
BtgI	CCRYGG	1 cut(s)	1069
BtgZI	GCGATG	1 cut(s)	662
BtsIMutI	CAGTG	3 cut(s)	1121, 1720, 2224
BveI	ACCTGC	2 cut(s)	661, 1336
Cac8I	GCNNGC	3 cut(s)	1144, 1932, 2023
CaiI	CAGNNNCTG	1 cut(s)	676
CfoI	GCGC	3 cut(s)	202, 1468, 2318
Cfr13I	GGNCC	1 cut(s)	237
Cfr9I	CCCGGG	1 cut(s)	749
ClaI	ATCGAT	1 cut(s)	1737
CseI	GACGC	1 cut(s)	2274
Csp6I	GTAC	2 cut(s)	829, 1232
CspCI	CAANNNNNGTGG	2 cut(s)	403, 438
CviQI	GTAC	2 cut(s)	829, 1232
DdeI	CTNAG	4 cut(s)	87, 129, 1881, 2123
DpnI	GATC	9 cut(s)	413, 1013, 1275, 1707, 1736, 1740, 1767, 2249, 2339
DpnII	GATC	9 cut(s)	411, 1011, 1273, 1705, 1734, 1738, 1765, 2247, 2337
EaeI	YGGCCR	1 cut(s)	938
EagI	CGGCCG	1 cut(s)	938
Eam1104I	CTCTTC	2 cut(s)	219, 2180
EarI	CTCTTC	2 cut(s)	219, 2180
EclXI	CGGCCG	1 cut(s)	938
Eco105I	TACGTA	1 cut(s)	288
Eco130I	CCWWGG	2 cut(s)	1069, 1257
Eco147I	AGGCCT	1 cut(s)	2050
Eco24I	GRGCYC	1 cut(s)	1048
Eco31I	GGTCTC	2 cut(s)	320, 2030
Eco32I	GATATC	1 cut(s)	1203
Eco47I	GGWCC	1 cut(s)	237
Eco47III	AGCGCT	1 cut(s)	2317
Eco52I	CGGCCG	1 cut(s)	938
Eco57I	CTGAAG	1 cut(s)	1968
Eco88I	CYCGRG	1 cut(s)	749
EcoNI	CCTNNNNNAGG	1 cut(s)	1147
EcoRI	GAATTC	1 cut(s)	601
EcoRII	CCWGG	2 cut(s)	768, 1708
EcoRV	GATATC	1 cut(s)	1203
EcoT14I	CCWWGG	2 cut(s)	1069, 1257
EcoT38I	GRGCYC	1 cut(s)	1048
ErhI	CCWWGG	2 cut(s)	1069, 1257
FaqI	GGGAC	1 cut(s)	259
FauI	CCCGC	2 cut(s)	63, 608
FauNDI	CATATG	2 cut(s)	1228, 1989
FbaI	TGATCA	2 cut(s)	411, 1011
FblI	GTMKAC	1 cut(s)	923
FriOI	GRGCYC	1 cut(s)	1048
FspBI	CTAG	2 cut(s)	1040, 1839
GlaI	GCGC	3 cut(s)	201, 1467, 2317
GsaI	CCCAGC	2 cut(s)	680, 1956
GsuI	CTGGAG	1 cut(s)	1478
HaeII	RGCGCY	1 cut(s)	2319
HaeIII	GGCC	2 cut(s)	940, 2050
HapII	CCGG	6 cut(s)	256, 337, 750, 1298, 1914, 2008
HgaI	GACGC	1 cut(s)	2274
HhaI	GCGC	3 cut(s)	202, 1468, 2318
Hin1I	GRCGYC	1 cut(s)	2266
Hin6I	GCGC	3 cut(s)	200, 1466, 2316
HinP1I	GCGC	3 cut(s)	200, 1466, 2316
HincII	GTYRAC	2 cut(s)	1629, 1657
HindII	GTYRAC	2 cut(s)	1629, 1657
HpaI	GTTAAC	1 cut(s)	1629
HpaII	CCGG	6 cut(s)	256, 337, 750, 1298, 1914, 2008
HphI	GGTGA	3 cut(s)	2152, 2332, 2372
Hpy166II	GTNNAC	7 cut(s)	808, 850, 924, 1241, 1432, 1629, 1657
Hpy188III	TCNNGA	9 cut(s)	218, 662, 995, 1279, 1417, 1457, 1763, 2008, 2411
Hpy8I	GTNNAC	7 cut(s)	808, 850, 924, 1241, 1432, 1629, 1657
HpyAV	CCTTC	5 cut(s)	368, 440, 748, 1049, 2365
HpyCH4III	ACNGT	5 cut(s)	23, 1429, 1724, 2017, 2219
HpyCH4IV	ACGT	3 cut(s)	287, 1168, 2082
HpyF10VI	GCNNNNNNNGC	4 cut(s)	14, 527, 1874, 2204
HpyF3I	CTNAG	4 cut(s)	87, 129, 1881, 2123
HpySE526I	ACGT	3 cut(s)	287, 1168, 2082
Hsp92I	GRCGYC	1 cut(s)	2266
HspAI	GCGC	3 cut(s)	200, 1466, 2316
Kpn2I	TCCGGA	1 cut(s)	2007
Ksp22I	TGATCA	2 cut(s)	411, 1011
KspAI	GTTAAC	1 cut(s)	1629
Kzo9I	GATC	9 cut(s)	411, 1011, 1273, 1705, 1734, 1738, 1765, 2247, 2337
LguI	GCTCTTC	1 cut(s)	219
LmnI	GCTCC	4 cut(s)	113, 1043, 1357, 1393
Lsp1109I	GCAGC	7 cut(s)	508, 610, 1785, 1788, 1864, 2037, 2305
LweI	GCATC	7 cut(s)	238, 354, 988, 1291, 1329, 1355, 1489
MaeI	CTAG	2 cut(s)	1040, 1839
MaeII	ACGT	3 cut(s)	287, 1168, 2082
MaeIII	GTNAC	4 cut(s)	23, 506, 948, 2213
MalI	GATC	9 cut(s)	413, 1013, 1275, 1707, 1736, 1740, 1767, 2249, 2339
MbiI	CCGCTC	1 cut(s)	1360
MboI	GATC	9 cut(s)	411, 1011, 1273, 1705, 1734, 1738, 1765, 2247, 2337
MfeI	CAATTG	1 cut(s)	2398
MflI	RGATCY	1 cut(s)	1273
MhlI	GDGCHC	5 cut(s)	173, 1048, 1398, 1613, 1722
MlyI	GAGTC	3 cut(s)	956, 1998, 2221
MmeI	TCCRAC	6 cut(s)	135, 420, 465, 620, 769, 1646
MroI	TCCGGA	1 cut(s)	2007
MroXI	GAANNNNTTC	1 cut(s)	378
MseI	TTAA	7 cut(s)	474, 582, 717, 777, 1412, 1628, 1980
MslI	CAYNNNNRTG	2 cut(s)	837, 1074
MspA1I	CMGCKG	1 cut(s)	86
MspI	CCGG	6 cut(s)	256, 337, 750, 1298, 1914, 2008
MspR9I	CCNGG	7 cut(s)	257, 338, 750, 751, 770, 1710, 1915
MunI	CAATTG	1 cut(s)	2398
Mva1269I	GAATGC	4 cut(s)	910, 1426, 1593, 2312
MvaI	CCWGG	2 cut(s)	770, 1710
MvnI	CGCG	2 cut(s)	1468, 2021
MwoI	GCNNNNNNNGC	4 cut(s)	14, 527, 1874, 2204
NciI	CCSGG	5 cut(s)	257, 338, 750, 751, 1915
NcoI	CCATGG	1 cut(s)	1069
NdeI	CATATG	2 cut(s)	1228, 1989
NdeII	GATC	9 cut(s)	411, 1011, 1273, 1705, 1734, 1738, 1765, 2247, 2337
NlaIV	GGNNCC	3 cut(s)	238, 1045, 1141
NmeAIII	GCCGAG	1 cut(s)	916
NmuCI	GTSAC	3 cut(s)	23, 948, 2213
NspI	RCATGY	4 cut(s)	227, 423, 829, 1438
NspV	TTCGAA	2 cut(s)	1113, 2369
OliI	CACNNNNGTG	1 cut(s)	837
PaqCI	CACCTGC	1 cut(s)	661
PceI	AGGCCT	1 cut(s)	2050
PciI	ACATGT	2 cut(s)	825, 1434
PciSI	GCTCTTC	1 cut(s)	219
PcsI	WCGNNNNNNNCGW	2 cut(s)	145, 164
PctI	GAATGC	4 cut(s)	910, 1426, 1593, 2312
PdmI	GAANNNNTTC	1 cut(s)	378
PflMI	CCANNNNNTGG	2 cut(s)	1509, 1818
PfoI	TCCNGGA	2 cut(s)	336, 1708
PleI	GAGTC	3 cut(s)	955, 1998, 2220
PpsI	GAGTC	3 cut(s)	955, 1998, 2220
Ppu21I	YACGTR	1 cut(s)	288
PscI	ACATGT	2 cut(s)	825, 1434
Psp6I	CCWGG	2 cut(s)	768, 1708
PspFI	CCCAGC	2 cut(s)	676, 1952
PspGI	CCWGG	2 cut(s)	768, 1708
PspN4I	GGNNCC	3 cut(s)	238, 1045, 1141
PspPI	GGNCC	1 cut(s)	237
PstNI	CAGNNNCTG	1 cut(s)	676
PsuI	RGATCY	1 cut(s)	1273
RsaI	GTAC	2 cut(s)	830, 1233
RsaNI	GTAC	2 cut(s)	829, 1232
RseI	CAYNNNNRTG	2 cut(s)	837, 1074
SapI	GCTCTTC	1 cut(s)	219
SaqAI	TTAA	7 cut(s)	474, 582, 717, 777, 1412, 1628, 1980
Sau3AI	GATC	9 cut(s)	411, 1011, 1273, 1705, 1734, 1738, 1765, 2247, 2337
Sau96I	GGNCC	1 cut(s)	237
SchI	GAGTC	3 cut(s)	956, 1998, 2221
ScrFI	CCNGG	7 cut(s)	257, 338, 750, 751, 770, 1710, 1915
SduI	GDGCHC	5 cut(s)	173, 1048, 1398, 1613, 1722
SfaNI	GCATC	7 cut(s)	238, 354, 988, 1291, 1329, 1355, 1489
SfuI	TTCGAA	2 cut(s)	1113, 2369
SinI	GGWCC	1 cut(s)	237
SmaI	CCCGGG	1 cut(s)	751
SmiMI	CAYNNNNRTG	2 cut(s)	837, 1074
SmlI	CTYRAG	1 cut(s)	944
SmoI	CTYRAG	1 cut(s)	944
SnaBI	TACGTA	1 cut(s)	288
SseBI	AGGCCT	1 cut(s)	2050
SsiI	CCGC	9 cut(s)	56, 84, 615, 711, 941, 1146, 1289, 1360, 2205
SspMI	CTAG	2 cut(s)	1040, 1839
StuI	AGGCCT	1 cut(s)	2050
StyD4I	CCNGG	7 cut(s)	255, 336, 748, 749, 768, 1708, 1913
StyI	CCWWGG	2 cut(s)	1069, 1257
TaaI	ACNGT	5 cut(s)	23, 1429, 1724, 2017, 2219
TaiI	ACGT	3 cut(s)	290, 1171, 2085
TaqII	GACCGA	1 cut(s)	2188
TatI	WGTACW	1 cut(s)	1231
TauI	GCSGC	3 cut(s)	86, 943, 1149
Tru1I	TTAA	7 cut(s)	474, 582, 717, 777, 1412, 1628, 1980
Tru9I	TTAA	7 cut(s)	474, 582, 717, 777, 1412, 1628, 1980
TscAI	CASTG	3 cut(s)	1128, 1727, 2224
TseFI	GTSAC	3 cut(s)	23, 948, 2213
TseI	GCWGC	8 cut(s)	5, 521, 623, 1798, 1801, 1877, 2025, 2318
Tsp45I	GTSAC	3 cut(s)	23, 948, 2213
TspMI	CCCGGG	1 cut(s)	749
TspRI	CASTG	3 cut(s)	1128, 1727, 2224
Van91I	CCANNNNNTGG	2 cut(s)	1509, 1818
VpaK11BI	GGWCC	1 cut(s)	237
XagI	CCTNNNNNAGG	1 cut(s)	1147
XapI	RAATTY	5 cut(s)	601, 1156, 1368, 1815, 2200
XceI	RCATGY	4 cut(s)	227, 423, 829, 1438
XcmI	CCANNNNNNNNNTGG	1 cut(s)	892
XmaI	CCCGGG	1 cut(s)	749
XmiI	GTMKAC	1 cut(s)	923
XmnI	GAANNNNTTC	1 cut(s)	378
XspI	CTAG	2 cut(s)	1040, 1839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.