Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0008443

Physical Location & Seq

Genomic Coordinates Forward (+)

15509847 .. 15512889

Gene Structure 3043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g18100.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGGAGAACAACTTCTTCCTCAACGCCGGAATCCCGCCCTCGCTGCACTTTGAACCGGCGCAGTCAATGCCCTCGTGGCGTTCTTTGTCAACTGCAATGGACATTCAATCCGCCGACCAGAATTGCTCGTCGGCGCGATCGCCGGAGTGCTTCTACAACCCCAACTGGGAAAAACACTCAACCGACCACCAAAATGTCCATTTCGAGTCTGCCCTGAGCTCAATGGTGTCGTCTCCGGTGGCCTCCAACTCCAACATCTCAAATGAAAGCGTTGTCATTAGAGAACTCATAGGGAAGCTCGGCAGCATTGGCAACAGTTCCAATGAGATCTCGGCGACCATTCCGGCTAACAATTCTTACATGGGCGGTGGAAATGGTAGCACCAACACTTCATGCTACAGCACTCCTCTGAATTCACCTCCTAAGCTGAACTTGCCGATGATGGATCATTTGGCCAAGGAGAAGCTTCCCAGTTTGGGAAAGACTTCGATGCCATTGAACTCCAGCGTGGCGGAGTTCTCAGCTGATCCTGGATTTGCAGAGAGGGCGGCAAAGTTCTCGTGCTTCGGAAGCAGGAGTTTCAATGGTAGAACCAGCCAGCAGCTTGGAACTCACACCAACAATTCTGAAGTGGTTTATAGATCTAATCAACTAATGGGAAATGGGAATAAACTCCCTAGAGTTTCGAGCAGTCCTTCTCTTAAGGCGCTTGGATCTCAGACAGAGCAGAGGAACTCACAATTGCCCAATTCTAGAGAAGAGTCCAAATCCACAGTAGTGTCTGAGCACCAAATGGGGGAGACAGGGATGGTACCTTCTTCTTCCACTGATTTGAGTTCCAGGAAAAGAAAAGCAGCTTCCAAGGGAAAAGCCAAGGACCCAATAAAGGTGGCTGAAGCTAGTGATGTTTCGGAATTGAATGCCAAGCGTTGCAAAGCAAACGAGAACGGGAACAATGAAGATGGCTCTGTTAAAGCAGAGGAAGACACAAAGGGAAGTACTAGTTCCGATGAGAAACAAGGTAAGACCGGTGCAAAGCCACCGGAGCCGCTCAAGGACTATATTCATGTACGAGCAAGAAGGGGCCAAGCCACTGACAGCCATAGTTTAGCCGAAAGGGTTCGAAGAGAGAAGATCAGCGAAAGAATGAAGCTTTTACAAGATCTTGTGCCGGGTTGCAACAAGGTGACCGGAAAGGCACTCATGCTAGATGAGATTATAAATTACGTGCAGTCATTACAGCGCCAAGTTGAGTTTCTCTCCATGAAGTTGTCTTCTGTGAATACCAGGCTGGATTTTAACATGGATGCTCTAATGTCAAAAGAGATATTTCAACAACAAAGTAGTTCTTTGCCACACCCAATATTCCCATCAGATTCCTCGGCACAAGCCATTTATGGTCACCAGCAAAATCCAGCACATTGCTCAGTGGACCCTTTAGATTCTGCACTATGCCAAAGCCTTGGGATGCAATTACCTCCCCTTAATGCTTTTAGTGAAGCTATGCCTCAGTATCCAGCATTTGGTGAAGATGACCTGCAGACCATTGTGCAGATGGGTTTTGGCCAAAATACGAACAAGGAAACTGAGTTTCATGGTTCAAACCAAGCGTCCCACATGAAAATTGAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

545

Amino Acids

59.18

Weight (kDa)

6.42

Isoelectric Point (pI)

52.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	367 - 414	7.9e-07	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	372 - 417	6.6e-07	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07340 AT3G07340 AT5G48560 AT5G48560
fragaria_vesca	FvH4_2g18100 FvH4_2g18100
malus_domestica	MD05G1165800.v1.1 MD10G1156100.v1.1
prunus_persica	Prupe.8G193900_v2.0.a1 Prupe.8G193900_v2.0.a1
pyrus_communis	pycom05g15450 pycom10g13430
rosa_chinensis	RchiOBHm_Chr6g0283511
rosa_laevigata	RLG00000012821
rosa_multiflora	Rmu_sc0004959.1_g000001
rosa_roxburghii	Rroxscaffold_7G00185480
rosa_rugosa	Rorug06G0154900 Rorug06G0155000
rosa_samantha	Rh6AG267200 Rh6BG269700 Rh6CG269500 Rh6DG263000
rosa_wichuraiana	Rw6G023130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1220
Acc36I	ACCTGC	1 cut(s)	1545
Acc65I	GGTACC	1 cut(s)	811
AccB1I	GGYRCC	1 cut(s)	811
AccB7I	CCANNNNNTGG	1 cut(s)	1523
AccBSI	CCGCTC	1 cut(s)	1051
AccII	CGCG	1 cut(s)	136
AciI	CCGC	6 cut(s)	35, 111, 366, 512, 548, 1049
AclWI	GGATC	3 cut(s)	453, 521, 721
AcoI	YGGCCR	2 cut(s)	453, 1564
AcsI	RAATTY	1 cut(s)	412
AcuI	CTGAAG	2 cut(s)	648, 915
AfaI	GTAC	3 cut(s)	813, 1000, 1071
AfiI	CCNNNNNNNGG	5 cut(s)	166, 476, 796, 886, 1523
AflII	CTTAAG	1 cut(s)	701
AgeI	ACCGGT	1 cut(s)	1028
AgsI	TTSAA	7 cut(s)	53, 107, 499, 583, 919, 1334, 1602
AhlI	ACTAGT	1 cut(s)	1001
AjnI	CCWGG	3 cut(s)	529, 839, 1286
AjuI	GAANNNNNNNTTGG	2 cut(s)	1239, 1271
AleI	CACNNNNGTG	1 cut(s)	776
Alw21I	GWGCWC	3 cut(s)	221, 789, 1632
Alw26I	GTCTC	2 cut(s)	237, 794
AlwI	GGATC	3 cut(s)	453, 521, 721
AoxI	GGCC	4 cut(s)	240, 453, 1084, 1564
ApeKI	GCWGC	4 cut(s)	43, 303, 601, 854
ApoI	RAATTY	1 cut(s)	412
ArsI	GACNNNNNNTTYG	2 cut(s)	1595, 1627
AsiGI	ACCGGT	1 cut(s)	1028
AsiSI	GCGATCGC	1 cut(s)	140
Asp700I	GAANNNNTTC	3 cut(s)	11, 484, 1119
Asp718I	GGTACC	1 cut(s)	811
AspLEI	GCGC	4 cut(s)	61, 136, 709, 1245
AspS9I	GGNCC	3 cut(s)	877, 1084, 1432
AsuC2I	CCSGG	1 cut(s)	1173
AsuHPI	GGTGA	4 cut(s)	408, 1198, 1394, 1538
AsuII	TTCGAA	1 cut(s)	1123
AvaII	GGWCC	2 cut(s)	877, 1432
BalI	TGGCCA	2 cut(s)	455, 1566
BanI	GGYRCC	1 cut(s)	811
BanII	GRGCYC	2 cut(s)	221, 1632
BauI	CACGAG	2 cut(s)	73, 559
BbsI	GAAGAC	2 cut(s)	990, 1266
Bbv12I	GWGCWC	3 cut(s)	221, 789, 1632
BbvI	GCAGC	4 cut(s)	30, 315, 613, 866
BccI	CCATC	5 cut(s)	436, 802, 956, 1378, 1549
BcgI	CGANNNNNNTGC	2 cut(s)	540, 574
BciT130I	CCWGG	3 cut(s)	531, 841, 1288
BciVI	GTATCC	1 cut(s)	1524
BcnI	CCSGG	1 cut(s)	1173
BcoDI	GTCTC	2 cut(s)	237, 794
BcuI	ACTAGT	1 cut(s)	1001
BfaI	CTAG	5 cut(s)	678, 753, 900, 1002, 1208
BfmI	CTRYAG	2 cut(s)	397, 1538
BfoI	RGCGCY	2 cut(s)	710, 1246
BfrI	CTTAAG	1 cut(s)	701
BfuAI	ACCTGC	1 cut(s)	1545
BfuI	GTATCC	1 cut(s)	1524
BglI	GCCNNNNNGGC	1 cut(s)	76
BglII	AGATCT	3 cut(s)	327, 641, 1162
BisI	GCNGC	6 cut(s)	44, 304, 549, 602, 855, 1049
BlsI	GCNGC	6 cut(s)	45, 305, 550, 603, 856, 1050
BmcAI	AGTACT	1 cut(s)	1000
Bme1390I	CCNGG	4 cut(s)	531, 841, 1173, 1288
Bme18I	GGWCC	2 cut(s)	877, 1432
BmgT120I	GGNCC	3 cut(s)	877, 1084, 1432
BmiI	GGNNCC	5 cut(s)	813, 879, 1047, 1085, 1434
BmrFI	CCNGG	4 cut(s)	531, 841, 1173, 1288
BmrI	ACTGGG	2 cut(s)	175, 465
BmsI	GCATC	3 cut(s)	480, 1297, 1458
BmuI	ACTGGG	2 cut(s)	175, 465
BpiI	GAAGAC	2 cut(s)	990, 1266
BplI	GAGNNNNNCTC	2 cut(s)	1244, 1276
BpmI	CTGGAG	1 cut(s)	487
Bpu10I	CCTNAGC	2 cut(s)	215, 423
Bpu14I	TTCGAA	1 cut(s)	1123
BpuEI	CTTGAG	1 cut(s)	1037
BpuMI	CCSGG	1 cut(s)	1173
BsaAI	YACGTR	1 cut(s)	1228
BsaJI	CCNNGG	5 cut(s)	456, 861, 873, 1380, 1462
BsaWI	WCCGGW	4 cut(s)	235, 1028, 1042, 1190
Bsc4I	CCNNNNNNNGG	5 cut(s)	166, 476, 796, 886, 1523
Bse118I	RCCGGY	2 cut(s)	55, 1028
Bse1I	ACTGG	2 cut(s)	170, 471
Bse3DI	GCAATG	2 cut(s)	102, 1420
BseBI	CCWGG	3 cut(s)	531, 841, 1288
BseDI	CCNNGG	5 cut(s)	456, 861, 873, 1380, 1462
BseGI	GGATG	3 cut(s)	813, 1312, 1473
BseLI	CCNNNNNNNGG	5 cut(s)	166, 476, 796, 886, 1523
BseMI	GCAATG	2 cut(s)	102, 1420
BseMII	CTCAG	7 cut(s)	206, 534, 731, 774, 1440, 1523, 1578
BseNI	ACTGG	2 cut(s)	170, 471
BseRI	GAGGAG	1 cut(s)	396
BseXI	GCAGC	4 cut(s)	30, 315, 613, 866
BsgI	GTGCAG	4 cut(s)	29, 1250, 1431, 1571
Bsh1236I	CGCG	1 cut(s)	136
Bsh1285I	CGRYCG	1 cut(s)	140
BshFI	GGCC	4 cut(s)	242, 455, 1086, 1566
BshNI	GGYRCC	1 cut(s)	811
BshTI	ACCGGT	1 cut(s)	1028
BsiEI	CGRYCG	1 cut(s)	140
BsiHKAI	GWGCWC	3 cut(s)	221, 789, 1632
BsiSI	CCGG	9 cut(s)	27, 56, 143, 236, 344, 1029, 1043, 1172, 1191
BslFI	GGGAC	1 cut(s)	1597
BslI	CCNNNNNNNGG	5 cut(s)	166, 476, 796, 886, 1523
BsmAI	GTCTC	2 cut(s)	237, 794
BsmBI	CGTCTC	1 cut(s)	237
BsmFI	GGGAC	1 cut(s)	1597
BsmI	GAATGC	1 cut(s)	925
BsnI	GGCC	4 cut(s)	242, 455, 1086, 1566
Bsp119I	TTCGAA	1 cut(s)	1123
Bsp1286I	GDGCHC	3 cut(s)	221, 789, 1632
Bsp143I	GATC	8 cut(s)	137, 327, 445, 526, 641, 713, 1134, 1162
BspACI	CCGC	6 cut(s)	35, 111, 366, 512, 548, 1049
BspANI	GGCC	4 cut(s)	242, 455, 1086, 1566
BspCNI	CTCAG	7 cut(s)	207, 533, 730, 775, 1439, 1522, 1579
BspFNI	CGCG	1 cut(s)	136
BspLI	GGNNCC	5 cut(s)	813, 879, 1047, 1085, 1434
BspMAI	CTGCAG	1 cut(s)	1542
BspMI	ACCTGC	1 cut(s)	1545
BspPI	GGATC	3 cut(s)	453, 521, 721
BspT104I	TTCGAA	1 cut(s)	1123
BspT107I	GGYRCC	1 cut(s)	811
BspTI	CTTAAG	1 cut(s)	701
BsrBI	CCGCTC	1 cut(s)	1051
BsrDI	GCAATG	2 cut(s)	102, 1420
BsrFI	RCCGGY	2 cut(s)	55, 1028
BsrI	ACTGG	2 cut(s)	170, 471
BssAI	RCCGGY	2 cut(s)	55, 1028
BssECI	CCNNGG	5 cut(s)	456, 861, 873, 1380, 1462
BssMI	GATC	8 cut(s)	137, 327, 445, 526, 641, 713, 1134, 1162
BssSI	CACGAG	2 cut(s)	73, 559
BssT1I	CCWWGG	4 cut(s)	456, 861, 873, 1462
Bst2BI	CACGAG	2 cut(s)	73, 559
Bst2UI	CCWGG	3 cut(s)	531, 841, 1288
Bst4CI	ACNGT	2 cut(s)	317, 775
Bst6I	CTCTTC	2 cut(s)	753, 1120
BstAFI	CTTAAG	1 cut(s)	701
BstAPI	GCANNNNNTGC	1 cut(s)	67
BstBAI	YACGTR	1 cut(s)	1228
BstBI	TTCGAA	1 cut(s)	1123
BstC8I	GCNNGC	1 cut(s)	599
BstDEI	CTNAG	8 cut(s)	215, 423, 520, 717, 783, 1426, 1509, 1587
BstEII	GGTNACC	2 cut(s)	1186, 1400
BstF5I	GGATG	3 cut(s)	813, 1312, 1473
BstFNI	CGCG	1 cut(s)	136
BstH2I	RGCGCY	2 cut(s)	710, 1246
BstHHI	GCGC	4 cut(s)	61, 136, 709, 1245
BstKTI	GATC	8 cut(s)	140, 330, 448, 529, 644, 716, 1137, 1165
BstMAI	GTCTC	2 cut(s)	237, 794
BstMBI	GATC	8 cut(s)	137, 327, 445, 526, 641, 713, 1134, 1162
BstMCI	CGRYCG	1 cut(s)	140
BstMWI	GCNNNNNNNGC	8 cut(s)	43, 67, 76, 309, 433, 545, 570, 1045
BstNI	CCWGG	3 cut(s)	531, 841, 1288
BstPI	GGTNACC	2 cut(s)	1186, 1400
BstSCI	CCNGG	4 cut(s)	529, 839, 1171, 1286
BstSFI	CTRYAG	2 cut(s)	397, 1538
BstUI	CGCG	1 cut(s)	136
BstV1I	GCAGC	4 cut(s)	30, 315, 613, 866
BstV2I	GAAGAC	2 cut(s)	990, 1266
BstX2I	RGATCY	4 cut(s)	327, 641, 713, 1162
BstXI	CCANNNNNNTGG	2 cut(s)	605, 1463
BstYI	RGATCY	4 cut(s)	327, 641, 713, 1162
BsuI	GTATCC	1 cut(s)	1524
BsuRI	GGCC	4 cut(s)	242, 455, 1086, 1566
BtsCI	GGATG	3 cut(s)	813, 1312, 1473
BtsIMutI	CAGTG	3 cut(s)	825, 1092, 1434
BveI	ACCTGC	1 cut(s)	1545
Cac8I	GCNNGC	1 cut(s)	599
CfoI	GCGC	4 cut(s)	61, 136, 709, 1245
Cfr10I	RCCGGY	2 cut(s)	55, 1028
Cfr13I	GGNCC	3 cut(s)	877, 1084, 1432
CseI	GACGC	1 cut(s)	1599
Csp6I	GTAC	3 cut(s)	812, 999, 1070
CspAI	ACCGGT	1 cut(s)	1028
CspCI	CAANNNNNGTGG	2 cut(s)	870, 905
CviAII	CATG	8 cut(s)	361, 393, 1067, 1204, 1264, 1303, 1595, 1618
CviQI	GTAC	3 cut(s)	812, 999, 1070
DdeI	CTNAG	8 cut(s)	215, 423, 520, 717, 783, 1426, 1509, 1587
DpnI	GATC	8 cut(s)	139, 329, 447, 528, 643, 715, 1136, 1164
DpnII	GATC	8 cut(s)	137, 327, 445, 526, 641, 713, 1134, 1162
EaeI	YGGCCR	2 cut(s)	453, 1564
Eam1104I	CTCTTC	2 cut(s)	753, 1120
EarI	CTCTTC	2 cut(s)	753, 1120
EciI	GGCGGA	2 cut(s)	100, 527
Ecl136II	GAGCTC	2 cut(s)	219, 1630
Eco130I	CCWWGG	4 cut(s)	456, 861, 873, 1462
Eco24I	GRGCYC	2 cut(s)	221, 1632
Eco47I	GGWCC	2 cut(s)	877, 1432
Eco53kI	GAGCTC	2 cut(s)	219, 1630
Eco57I	CTGAAG	2 cut(s)	648, 915
Eco91I	GGTNACC	2 cut(s)	1186, 1400
EcoICRI	GAGCTC	2 cut(s)	219, 1630
EcoO109I	RGGNCCY	1 cut(s)	877
EcoO65I	GGTNACC	2 cut(s)	1186, 1400
EcoRI	GAATTC	1 cut(s)	412
EcoRII	CCWGG	3 cut(s)	529, 839, 1286
EcoT14I	CCWWGG	4 cut(s)	456, 861, 873, 1462
EcoT38I	GRGCYC	2 cut(s)	221, 1632
ErhI	CCWWGG	4 cut(s)	456, 861, 873, 1462
Esp3I	CGTCTC	1 cut(s)	237
FaeI	CATG	8 cut(s)	364, 396, 1070, 1207, 1267, 1306, 1598, 1621
FalI	AAGNNNNNCTT	4 cut(s)	416, 448, 1333, 1365
FaqI	GGGAC	1 cut(s)	1597
FatI	CATG	8 cut(s)	360, 392, 1066, 1203, 1263, 1302, 1594, 1617
FauI	CCCGC	1 cut(s)	42
Fnu4HI	GCNGC	6 cut(s)	44, 304, 549, 602, 855, 1049
FokI	GGATG	3 cut(s)	820, 1319, 1480
FriOI	GRGCYC	2 cut(s)	221, 1632
Fsp4HI	GCNGC	6 cut(s)	44, 304, 549, 602, 855, 1049
FspBI	CTAG	5 cut(s)	678, 753, 900, 1002, 1208
GlaI	GCGC	4 cut(s)	60, 135, 708, 1244
GluI	GCNGC	6 cut(s)	44, 304, 549, 602, 855, 1049
GsuI	CTGGAG	1 cut(s)	487
HaeII	RGCGCY	2 cut(s)	710, 1246
HaeIII	GGCC	4 cut(s)	242, 455, 1086, 1566
HapII	CCGG	9 cut(s)	27, 56, 143, 236, 344, 1029, 1043, 1172, 1191
HgaI	GACGC	1 cut(s)	1599
HhaI	GCGC	4 cut(s)	61, 136, 709, 1245
Hin1II	CATG	8 cut(s)	364, 396, 1070, 1207, 1267, 1306, 1598, 1621
Hin6I	GCGC	4 cut(s)	59, 134, 707, 1243
HinP1I	GCGC	4 cut(s)	59, 134, 707, 1243
HincII	GTYRAC	1 cut(s)	90
HindII	GTYRAC	1 cut(s)	90
HindIII	AAGCTT	2 cut(s)	464, 1151
HinfI	GANTC	5 cut(s)	30, 206, 761, 1376, 1442
HpaII	CCGG	9 cut(s)	27, 56, 143, 236, 344, 1029, 1043, 1172, 1191
HphI	GGTGA	4 cut(s)	408, 1198, 1394, 1538
Hpy166II	GTNNAC	2 cut(s)	90, 1432
Hpy188I	TCNGA	9 cut(s)	411, 569, 628, 720, 784, 913, 1009, 1375, 1634
Hpy188III	TCNNGA	1 cut(s)	753
Hpy8I	GTNNAC	2 cut(s)	90, 1432
Hpy99I	CGWCG	1 cut(s)	133
HpyAV	CCTTC	3 cut(s)	705, 825, 1074
HpyCH4III	ACNGT	2 cut(s)	317, 775
HpyCH4IV	ACGT	1 cut(s)	1227
HpyF10VI	GCNNNNNNNGC	8 cut(s)	43, 67, 76, 309, 433, 545, 570, 1045
HpyF3I	CTNAG	8 cut(s)	215, 423, 520, 717, 783, 1426, 1509, 1587
HpySE526I	ACGT	1 cut(s)	1227
Hsp92II	CATG	8 cut(s)	364, 396, 1070, 1207, 1267, 1306, 1598, 1621
HspAI	GCGC	4 cut(s)	59, 134, 707, 1243
KpnI	GGTACC	1 cut(s)	815
Kzo9I	GATC	8 cut(s)	137, 327, 445, 526, 641, 713, 1134, 1162
LmnI	GCTCC	1 cut(s)	1045
Lsp1109I	GCAGC	4 cut(s)	30, 315, 613, 866
LweI	GCATC	3 cut(s)	480, 1297, 1458
MaeI	CTAG	5 cut(s)	678, 753, 900, 1002, 1208
MaeII	ACGT	1 cut(s)	1227
MaeIII	GTNAC	2 cut(s)	1186, 1400
MalI	GATC	8 cut(s)	139, 329, 447, 528, 643, 715, 1136, 1164
MbiI	CCGCTC	1 cut(s)	1051
MboI	GATC	8 cut(s)	137, 327, 445, 526, 641, 713, 1134, 1162
MfeI	CAATTG	1 cut(s)	740
MflI	RGATCY	4 cut(s)	327, 641, 713, 1162
MhlI	GDGCHC	3 cut(s)	221, 789, 1632
MlsI	TGGCCA	2 cut(s)	455, 1566
MluNI	TGGCCA	2 cut(s)	455, 1566
MlyI	GAGTC	2 cut(s)	215, 770
MmeI	TCCRAC	2 cut(s)	270, 276
Mox20I	TGGCCA	2 cut(s)	455, 1566
MroXI	GAANNNNTTC	3 cut(s)	11, 484, 1119
MscI	TGGCCA	2 cut(s)	455, 1566
MseI	TTAA	4 cut(s)	702, 972, 1299, 1485
MslI	CAYNNNNRTG	2 cut(s)	192, 776
Msp20I	TGGCCA	2 cut(s)	455, 1566
MspA1I	CMGCKG	1 cut(s)	524
MspCI	CTTAAG	1 cut(s)	701
MspI	CCGG	9 cut(s)	27, 56, 143, 236, 344, 1029, 1043, 1172, 1191
MspR9I	CCNGG	4 cut(s)	531, 841, 1173, 1288
MunI	CAATTG	1 cut(s)	740
Mva1269I	GAATGC	1 cut(s)	925
MvaI	CCWGG	3 cut(s)	531, 841, 1288
MvnI	CGCG	1 cut(s)	136
MwoI	GCNNNNNNNGC	8 cut(s)	43, 67, 76, 309, 433, 545, 570, 1045
NciI	CCSGG	1 cut(s)	1173
NdeII	GATC	8 cut(s)	137, 327, 445, 526, 641, 713, 1134, 1162
NlaIII	CATG	8 cut(s)	364, 396, 1070, 1207, 1267, 1306, 1598, 1621
NlaIV	GGNNCC	5 cut(s)	813, 879, 1047, 1085, 1434
NmeAIII	GCCGAG	3 cut(s)	279, 311, 1361
NmuCI	GTSAC	2 cut(s)	1186, 1400
NspV	TTCGAA	1 cut(s)	1123
OliI	CACNNNNGTG	1 cut(s)	776
PctI	GAATGC	1 cut(s)	925
PdmI	GAANNNNTTC	3 cut(s)	11, 484, 1119
PfeI	GAWTC	3 cut(s)	30, 1376, 1442
PflMI	CCANNNNNTGG	1 cut(s)	1523
PfoI	TCCNGGA	2 cut(s)	529, 839
PinAI	ACCGGT	1 cut(s)	1028
PkrI	GCNGC	6 cut(s)	45, 305, 550, 603, 856, 1050
Ple19I	CGATCG	1 cut(s)	140
PleI	GAGTC	2 cut(s)	214, 769
PpsI	GAGTC	2 cut(s)	214, 769
Ppu21I	YACGTR	1 cut(s)	1228
PpuMI	RGGWCCY	1 cut(s)	877
PsiI	TTATAA	1 cut(s)	1220
Psp124BI	GAGCTC	2 cut(s)	221, 1632
Psp5II	RGGWCCY	1 cut(s)	877
Psp6I	CCWGG	3 cut(s)	529, 839, 1286
PspEI	GGTNACC	2 cut(s)	1186, 1400
PspGI	CCWGG	3 cut(s)	529, 839, 1286
PspN4I	GGNNCC	5 cut(s)	813, 879, 1047, 1085, 1434
PspPI	GGNCC	3 cut(s)	877, 1084, 1432
PspPPI	RGGWCCY	1 cut(s)	877
PstI	CTGCAG	1 cut(s)	1542
PsuI	RGATCY	4 cut(s)	327, 641, 713, 1162
PvuI	CGATCG	1 cut(s)	140
PvuII	CAGCTG	1 cut(s)	524
RgaI	GCGATCGC	1 cut(s)	140
RsaI	GTAC	3 cut(s)	813, 1000, 1071
RsaNI	GTAC	3 cut(s)	812, 999, 1070
RseI	CAYNNNNRTG	2 cut(s)	192, 776
SacI	GAGCTC	2 cut(s)	221, 1632
SaqAI	TTAA	4 cut(s)	702, 972, 1299, 1485
SatI	GCNGC	6 cut(s)	44, 304, 549, 602, 855, 1049
Sau3AI	GATC	8 cut(s)	137, 327, 445, 526, 641, 713, 1134, 1162
Sau96I	GGNCC	3 cut(s)	877, 1084, 1432
ScaI	AGTACT	1 cut(s)	1000
SchI	GAGTC	2 cut(s)	215, 770
ScrFI	CCNGG	4 cut(s)	531, 841, 1173, 1288
SduI	GDGCHC	3 cut(s)	221, 789, 1632
SfaAI	GCGATCGC	1 cut(s)	140
SfaNI	GCATC	3 cut(s)	480, 1297, 1458
SfcI	CTRYAG	2 cut(s)	397, 1538
SfuI	TTCGAA	1 cut(s)	1123
SgfI	GCGATCGC	1 cut(s)	140
SinI	GGWCC	2 cut(s)	877, 1432
SmiMI	CAYNNNNRTG	2 cut(s)	192, 776
SmlI	CTYRAG	2 cut(s)	701, 1052
SmoI	CTYRAG	2 cut(s)	701, 1052
SpeI	ACTAGT	1 cut(s)	1001
SsiI	CCGC	6 cut(s)	35, 111, 366, 512, 548, 1049
SspI	AATATT	1 cut(s)	1365
SspMI	CTAG	5 cut(s)	678, 753, 900, 1002, 1208
SstI	GAGCTC	2 cut(s)	221, 1632
StyD4I	CCNGG	4 cut(s)	529, 839, 1171, 1286
StyI	CCWWGG	4 cut(s)	456, 861, 873, 1462
TaaI	ACNGT	2 cut(s)	317, 775
TaiI	ACGT	1 cut(s)	1230
TaqI	TCGA	4 cut(s)	204, 488, 686, 1123
TatI	WGTACW	1 cut(s)	998
TauI	GCSGC	2 cut(s)	551, 1051
TfiI	GAWTC	3 cut(s)	30, 1376, 1442
Tru1I	TTAA	4 cut(s)	702, 972, 1299, 1485
Tru9I	TTAA	4 cut(s)	702, 972, 1299, 1485
TscAI	CASTG	3 cut(s)	832, 1099, 1434
TseFI	GTSAC	2 cut(s)	1186, 1400
TseI	GCWGC	4 cut(s)	43, 303, 601, 854
Tsp45I	GTSAC	2 cut(s)	1186, 1400
TspDTI	ATGAA	8 cut(s)	279, 381, 972, 1055, 1163, 1280, 1583, 1634
TspRI	CASTG	3 cut(s)	832, 1099, 1434
Van91I	CCANNNNNTGG	1 cut(s)	1523
Vha464I	CTTAAG	1 cut(s)	701
VpaK11BI	GGWCC	2 cut(s)	877, 1432
XapI	RAATTY	1 cut(s)	412
XbaI	TCTAGA	1 cut(s)	752
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1552
XmnI	GAANNNNTTC	3 cut(s)	11, 484, 1119
XspI	CTAG	5 cut(s)	678, 753, 900, 1002, 1208
ZrmI	AGTACT	1 cut(s)	1000

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.