Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008443

Physical Location & Seq

Genomic Coordinates Reverse (-)

24851552 .. 24854265

Gene Structure 2714 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00185480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGAGAACAACTTTTTCCTCAACGCCGGAATCCCGCCCTCGCTGCACTTTGAACCGGCACAGTCAATGCCCTCGTGGCGTTCTTTATCAACTGCAATGGACATTCAATGCCCCGACCGGAATTGCTCGTCGGAGCGATCGCCGGAGTGCTTCTACAATCCCAACTGGGACAACAAGTCAACCGACCACCAGAGCGTCCACTTCGAGTCTGCCCTGAGTTCGATGGTGTCGTCTCCGGTGGCGTCCAACTCCAACATCTCCAATGAGAGCTTTGTCATCAGAGAACTGATAGGGAAGCTCGGCAGCATTGGCAACAGTTCCAACGAGATCTCGGCTACCATTCCGGCTAACAGTAATTCTTACATGGGCGGTGGAAATGGGAGCACCAACACTTCATGCTACAGCACTCCTCTGAATTCTCCTCCGAAGCTCAACTTGCCGATTAAGGATCATCATTTGGCGAAAGAGAAGCTACCCAGTTTGGGAAAGTCGATGCCCTTGAACTCCAGCGTGGCCGAGTTCTCGGCTGATCCCGGATTTGCAGAGAGGGCGGCCAAGTTCTCGTGTTTCGGAAGCAGGAGTTTTAATGACAGAACCGCCCAGCTTGGAACGCACACTAACAATTCTGAAGTGGCTTATAGATCTAATCAACTAATATTGGGGAATGGGAATAAACTCCCTCGAGTTTCGAGCAGTCCTTCTCTTAAGGCGCTTGGATCTCAGACGGAGCAGAGGACTTCCCAATTGCCCAATTCTCGAGAAGAGTCCAAATCCACAGTAGCATCTGAACAACAAAGCCCAATTGGGGAGACAGGGCTGGTACCTTCTTCTTCCGCTGATATGAGTTCCAGGAAAAGAAAAGCAGCTTCCAAGGGAAAAGCCAAGGACCCAGTAAAGGTGGCTGAAGCTAGTGATATTTCGGATTTGAATGCCAAGCGTTGCAAGCCAAACGAGGGTAATGTGAACAATGAAAACGGCTCTGTTAAAGCAGAGGAAGATACAAAGGGAAGTACTAGTTCCGATGAGAAACCAGGCAAGACTGGTTCGAAGCCACCGGAGCCTCTCAAGGACTATATTCATGTACGAGCAAGAAGGGGTCAAGCCACTGACAGCCATAGTCTAGCTGAAAGGGTCCGAAGAGAGAAGATCAGTGAAAGGATGAAGCTTCTACAAGATCTTGTGCCGGGTTGCAACAAGGTGACCGGAAAAGCACTCATGCTAGACGAGATTATAAATTACGTGCAGTCATTACAGCGCCAAGTTGAGTTTCTCTCCATGAAGTTGTCTTCTGTTAATACCACCAGGCTGGATTTTAACATGGAAGCTCTAATGTCAAAAGAGATATTTCAACAACAAAGCAGTTCTTTGCCACACCCAATATTCCCATCAGATTCCTCGGCACAAGCCATTTACGGTCACCAGCAAAGTCCAGCACATTGCTCAGTGGACCCGTTAGATTCTGCATTATGCCAAAGCCTTGGGATGCAATTACCTCCCCTCAATGCTTTTAGTGAAGCTATGCCTCAGTATCCAGGATTTGGTGAAGATGACCTGCAAACCATTGTGCAAATGGGTTTTGGCCAAAACCCAAATAACGAAACAGAATTTCATGGTTCAAACCAAGCATCCCACATGAAAATTGAGCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

549

Amino Acids

59.63

Weight (kDa)

6.42

Isoelectric Point (pI)

55.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	371 - 418	8.2e-07	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	376 - 421	6.8e-07	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07340 AT3G07340 AT5G48560 AT5G48560
fragaria_vesca	FvH4_2g18100 FvH4_2g18100
malus_domestica	MD05G1165800.v1.1 MD10G1156100.v1.1
prunus_persica	Prupe.8G193900_v2.0.a1 Prupe.8G193900_v2.0.a1
pyrus_communis	pycom05g15450 pycom10g13430
rosa_chinensis	RchiOBHm_Chr6g0283511
rosa_laevigata	RLG00000012821
rosa_multiflora	Rmu_sc0004959.1_g000001
rosa_roxburghii	Rroxscaffold_7G00185480
rosa_rugosa	Rorug06G0154900 Rorug06G0155000
rosa_samantha	Rh6AG267200 Rh6BG269700 Rh6CG269500 Rh6DG263000
rosa_wichuraiana	Rw6G023130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1232
Acc36I	ACCTGC	1 cut(s)	1560
Acc65I	GGTACC	1 cut(s)	820
AccB1I	GGYRCC	1 cut(s)	820
AccB7I	CCANNNNNTGG	1 cut(s)	1538
AciI	CCGC	5 cut(s)	35, 369, 551, 597, 834
AclWI	GGATC	3 cut(s)	456, 524, 724
AcoI	YGGCCR	3 cut(s)	513, 552, 1579
AcsI	RAATTY	2 cut(s)	415, 1604
AcuI	CTGAAG	2 cut(s)	648, 924
AcyI	GRCGYC	1 cut(s)	242
AfaI	GTAC	3 cut(s)	822, 1012, 1083
AfiI	CCNNNNNNNGG	5 cut(s)	482, 805, 895, 953, 1538
AflII	CTTAAG	1 cut(s)	704
AgsI	TTSAA	6 cut(s)	53, 107, 502, 928, 1349, 1617
AhdI	GACNNNNNGTC	1 cut(s)	175
AhlI	ACTAGT	1 cut(s)	1013
AjnI	CCWGG	4 cut(s)	848, 1030, 1301, 1531
AjuI	GAANNNNNNNTTGG	2 cut(s)	1251, 1283
Alw21I	GWGCWC	2 cut(s)	386, 1647
Alw26I	GTCTC	2 cut(s)	237, 803
AlwI	GGATC	3 cut(s)	456, 524, 724
Ama87I	CYCGRG	2 cut(s)	681, 756
AoxI	GGCC	3 cut(s)	513, 552, 1579
ApeKI	GCWGC	3 cut(s)	43, 303, 863
ApoI	RAATTY	2 cut(s)	415, 1604
AsiSI	GCGATCGC	1 cut(s)	140
Asp718I	GGTACC	1 cut(s)	820
AspLEI	GCGC	2 cut(s)	712, 1257
AspS9I	GGNCC	3 cut(s)	886, 1132, 1447
AsuC2I	CCSGG	2 cut(s)	534, 1185
AsuHPI	GGTGA	3 cut(s)	1210, 1409, 1553
AsuII	TTCGAA	1 cut(s)	1046
AvaI	CYCGRG	2 cut(s)	681, 756
AvaII	GGWCC	3 cut(s)	886, 1132, 1447
BalI	TGGCCA	1 cut(s)	1581
BanI	GGYRCC	1 cut(s)	820
BauI	CACGAG	2 cut(s)	73, 562
BbsI	GAAGAC	1 cut(s)	1278
Bbv12I	GWGCWC	2 cut(s)	386, 1647
BbvI	GCAGC	3 cut(s)	30, 315, 875
BccI	CCATC	2 cut(s)	217, 1393
BceAI	ACGGC	1 cut(s)	991
BciT130I	CCWGG	4 cut(s)	850, 1032, 1303, 1533
BciVI	GTATCC	1 cut(s)	1539
BcnI	CCSGG	2 cut(s)	534, 1185
BcoDI	GTCTC	2 cut(s)	237, 803
BcuI	ACTAGT	1 cut(s)	1013
BfaI	CTAG	4 cut(s)	909, 1014, 1121, 1220
BfmI	CTRYAG	1 cut(s)	400
BfoI	RGCGCY	2 cut(s)	713, 1258
BfrI	CTTAAG	1 cut(s)	704
BfuAI	ACCTGC	1 cut(s)	1560
BfuI	GTATCC	1 cut(s)	1539
BglI	GCCNNNNNGGC	1 cut(s)	76
BglII	AGATCT	3 cut(s)	327, 641, 1174
BisI	GCNGC	4 cut(s)	44, 304, 552, 864
BlsI	GCNGC	4 cut(s)	45, 305, 553, 865
BmcAI	AGTACT	1 cut(s)	1012
Bme1390I	CCNGG	6 cut(s)	534, 850, 1032, 1185, 1303, 1533
Bme18I	GGWCC	3 cut(s)	886, 1132, 1447
BmeRI	GACNNNNNGTC	1 cut(s)	175
BmeT110I	CYCGRG	2 cut(s)	681, 756
BmgT120I	GGNCC	3 cut(s)	886, 1132, 1447
BmiI	GGNNCC	5 cut(s)	822, 888, 1059, 1133, 1449
BmrFI	CCNGG	6 cut(s)	534, 850, 1032, 1185, 1303, 1533
BmrI	ACTGGG	3 cut(s)	175, 471, 884
BmsI	GCATC	4 cut(s)	483, 791, 1473, 1634
BmuI	ACTGGG	3 cut(s)	175, 471, 884
BpiI	GAAGAC	1 cut(s)	1278
BplI	GAGNNNNNCTC	2 cut(s)	1256, 1288
BpmI	CTGGAG	1 cut(s)	490
Bpu14I	TTCGAA	1 cut(s)	1046
BpuEI	CTTGAG	1 cut(s)	1049
BpuMI	CCSGG	2 cut(s)	534, 1185
BsaAI	YACGTR	1 cut(s)	1240
BsaHI	GRCGYC	1 cut(s)	242
BsaJI	CCNNGG	4 cut(s)	870, 882, 1395, 1477
BsaWI	WCCGGW	4 cut(s)	117, 235, 1054, 1202
Bsc4I	CCNNNNNNNGG	5 cut(s)	482, 805, 895, 953, 1538
Bse118I	RCCGGY	1 cut(s)	55
Bse1I	ACTGG	4 cut(s)	170, 477, 890, 1045
Bse3DI	GCAATG	2 cut(s)	102, 1435
BseBI	CCWGG	4 cut(s)	850, 1032, 1303, 1533
BseDI	CCNNGG	4 cut(s)	870, 882, 1395, 1477
BseGI	GGATG	3 cut(s)	1164, 1488, 1625
BseLI	CCNNNNNNNGG	5 cut(s)	482, 805, 895, 953, 1538
BseMI	GCAATG	2 cut(s)	102, 1435
BseMII	CTCAG	4 cut(s)	206, 734, 1455, 1538
BseNI	ACTGG	4 cut(s)	170, 477, 890, 1045
BseRI	GAGGAG	2 cut(s)	399, 411
BseXI	GCAGC	3 cut(s)	30, 315, 875
BseYI	CCCAGC	1 cut(s)	600
BsgI	GTGCAG	2 cut(s)	29, 1262
Bsh1285I	CGRYCG	2 cut(s)	118, 140
BshFI	GGCC	3 cut(s)	515, 554, 1581
BshNI	GGYRCC	1 cut(s)	820
BsiEI	CGRYCG	2 cut(s)	118, 140
BsiHKAI	GWGCWC	2 cut(s)	386, 1647
BsiHKCI	CYCGRG	2 cut(s)	681, 756
BslFI	GGGAC	1 cut(s)	182
BslI	CCNNNNNNNGG	5 cut(s)	482, 805, 895, 953, 1538
BsmAI	GTCTC	2 cut(s)	237, 803
BsmBI	CGTCTC	1 cut(s)	237
BsmFI	GGGAC	1 cut(s)	182
BsmI	GAATGC	1 cut(s)	934
BsnI	GGCC	3 cut(s)	515, 554, 1581
BsoBI	CYCGRG	2 cut(s)	681, 756
Bsp119I	TTCGAA	1 cut(s)	1046
Bsp1286I	GDGCHC	2 cut(s)	386, 1647
Bsp143I	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
BspACI	CCGC	5 cut(s)	35, 369, 551, 597, 834
BspANI	GGCC	3 cut(s)	515, 554, 1581
BspCNI	CTCAG	4 cut(s)	207, 733, 1454, 1537
BspLI	GGNNCC	5 cut(s)	822, 888, 1059, 1133, 1449
BspMI	ACCTGC	1 cut(s)	1560
BspPI	GGATC	3 cut(s)	456, 524, 724
BspT104I	TTCGAA	1 cut(s)	1046
BspT107I	GGYRCC	1 cut(s)	820
BspTI	CTTAAG	1 cut(s)	704
BsrDI	GCAATG	2 cut(s)	102, 1435
BsrFI	RCCGGY	1 cut(s)	55
BsrI	ACTGG	4 cut(s)	170, 477, 890, 1045
BssAI	RCCGGY	1 cut(s)	55
BssECI	CCNNGG	4 cut(s)	870, 882, 1395, 1477
BssMI	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
BssNI	GRCGYC	1 cut(s)	242
BssSI	CACGAG	2 cut(s)	73, 562
BssT1I	CCWWGG	3 cut(s)	870, 882, 1477
Bst2BI	CACGAG	2 cut(s)	73, 562
Bst2UI	CCWGG	4 cut(s)	850, 1032, 1303, 1533
Bst4CI	ACNGT	5 cut(s)	63, 317, 353, 778, 1415
Bst6I	CTCTTC	2 cut(s)	756, 1132
BstACI	GRCGYC	1 cut(s)	242
BstAFI	CTTAAG	1 cut(s)	704
BstBAI	YACGTR	1 cut(s)	1240
BstBI	TTCGAA	1 cut(s)	1046
BstC8I	GCNNGC	1 cut(s)	944
BstDEI	CTNAG	4 cut(s)	215, 720, 1441, 1524
BstEII	GGTNACC	2 cut(s)	1198, 1415
BstF5I	GGATG	3 cut(s)	1164, 1488, 1625
BstH2I	RGCGCY	2 cut(s)	713, 1258
BstHHI	GCGC	2 cut(s)	712, 1257
BstKTI	GATC	8 cut(s)	140, 330, 451, 532, 644, 719, 1149, 1177
BstMAI	GTCTC	2 cut(s)	237, 803
BstMBI	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
BstMCI	CGRYCG	2 cut(s)	118, 140
BstMWI	GCNNNNNNNGC	8 cut(s)	43, 76, 309, 436, 548, 610, 943, 1057
BstNI	CCWGG	4 cut(s)	850, 1032, 1303, 1533
BstPI	GGTNACC	2 cut(s)	1198, 1415
BstSCI	CCNGG	6 cut(s)	532, 848, 1030, 1183, 1301, 1531
BstSFI	CTRYAG	1 cut(s)	400
BstV1I	GCAGC	3 cut(s)	30, 315, 875
BstV2I	GAAGAC	1 cut(s)	1278
BstX2I	RGATCY	4 cut(s)	327, 641, 716, 1174
BstXI	CCANNNNNNTGG	2 cut(s)	1306, 1478
BstYI	RGATCY	4 cut(s)	327, 641, 716, 1174
BsuI	GTATCC	1 cut(s)	1539
BsuRI	GGCC	3 cut(s)	515, 554, 1581
BtsCI	GGATG	3 cut(s)	1164, 1488, 1625
BtsIMutI	CAGTG	4 cut(s)	1104, 1156, 1449, 1645
BveI	ACCTGC	1 cut(s)	1560
Cac8I	GCNNGC	1 cut(s)	944
CfoI	GCGC	2 cut(s)	712, 1257
Cfr10I	RCCGGY	1 cut(s)	55
Cfr13I	GGNCC	3 cut(s)	886, 1132, 1447
CseI	GACGC	2 cut(s)	184, 231
Csp6I	GTAC	3 cut(s)	821, 1011, 1082
CviAII	CATG	8 cut(s)	364, 396, 1079, 1216, 1276, 1318, 1610, 1633
CviQI	GTAC	3 cut(s)	821, 1011, 1082
DdeI	CTNAG	4 cut(s)	215, 720, 1441, 1524
DpnI	GATC	8 cut(s)	139, 329, 450, 531, 643, 718, 1148, 1176
DpnII	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
DriI	GACNNNNNGTC	1 cut(s)	175
EaeI	YGGCCR	3 cut(s)	513, 552, 1579
Eam1104I	CTCTTC	2 cut(s)	756, 1132
Eam1105I	GACNNNNNGTC	1 cut(s)	175
EarI	CTCTTC	2 cut(s)	756, 1132
Eco130I	CCWWGG	3 cut(s)	870, 882, 1477
Eco47I	GGWCC	3 cut(s)	886, 1132, 1447
Eco57I	CTGAAG	2 cut(s)	648, 924
Eco88I	CYCGRG	2 cut(s)	681, 756
Eco91I	GGTNACC	2 cut(s)	1198, 1415
EcoO109I	RGGNCCY	1 cut(s)	886
EcoO65I	GGTNACC	2 cut(s)	1198, 1415
EcoRI	GAATTC	1 cut(s)	415
EcoRII	CCWGG	4 cut(s)	848, 1030, 1301, 1531
EcoT14I	CCWWGG	3 cut(s)	870, 882, 1477
ErhI	CCWWGG	3 cut(s)	870, 882, 1477
Esp3I	CGTCTC	1 cut(s)	237
FaeI	CATG	8 cut(s)	367, 399, 1082, 1219, 1279, 1321, 1613, 1636
FalI	AAGNNNNNCTT	4 cut(s)	419, 451, 1348, 1380
FaqI	GGGAC	1 cut(s)	182
FatI	CATG	8 cut(s)	363, 395, 1078, 1215, 1275, 1317, 1609, 1632
FauI	CCCGC	1 cut(s)	42
Fnu4HI	GCNGC	4 cut(s)	44, 304, 552, 864
FokI	GGATG	3 cut(s)	1171, 1495, 1612
Fsp4HI	GCNGC	4 cut(s)	44, 304, 552, 864
FspBI	CTAG	4 cut(s)	909, 1014, 1121, 1220
GlaI	GCGC	2 cut(s)	711, 1256
GluI	GCNGC	4 cut(s)	44, 304, 552, 864
GsaI	CCCAGC	1 cut(s)	604
GsuI	CTGGAG	1 cut(s)	490
HaeII	RGCGCY	2 cut(s)	713, 1258
HaeIII	GGCC	3 cut(s)	515, 554, 1581
HgaI	GACGC	2 cut(s)	184, 231
HhaI	GCGC	2 cut(s)	712, 1257
Hin1I	GRCGYC	1 cut(s)	242
Hin1II	CATG	8 cut(s)	367, 399, 1082, 1219, 1279, 1321, 1613, 1636
Hin6I	GCGC	2 cut(s)	710, 1255
HinP1I	GCGC	2 cut(s)	710, 1255
HincII	GTYRAC	1 cut(s)	180
HindII	GTYRAC	1 cut(s)	180
HindIII	AAGCTT	1 cut(s)	1163
HinfI	GANTC	5 cut(s)	30, 206, 764, 1391, 1457
HphI	GGTGA	3 cut(s)	1210, 1409, 1553
Hpy166II	GTNNAC	4 cut(s)	180, 199, 964, 1447
Hpy188III	TCNNGA	2 cut(s)	756, 758
Hpy8I	GTNNAC	4 cut(s)	180, 199, 964, 1447
Hpy99I	CGWCG	1 cut(s)	133
HpyAV	CCTTC	3 cut(s)	708, 834, 1086
HpyCH4III	ACNGT	5 cut(s)	63, 317, 353, 778, 1415
HpyCH4IV	ACGT	1 cut(s)	1239
HpyF10VI	GCNNNNNNNGC	8 cut(s)	43, 76, 309, 436, 548, 610, 943, 1057
HpyF3I	CTNAG	4 cut(s)	215, 720, 1441, 1524
HpySE526I	ACGT	1 cut(s)	1239
Hsp92I	GRCGYC	1 cut(s)	242
Hsp92II	CATG	8 cut(s)	367, 399, 1082, 1219, 1279, 1321, 1613, 1636
HspAI	GCGC	2 cut(s)	710, 1255
KpnI	GGTACC	1 cut(s)	824
Kzo9I	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
LmnI	GCTCC	4 cut(s)	133, 381, 727, 1057
Lsp1109I	GCAGC	3 cut(s)	30, 315, 875
LweI	GCATC	4 cut(s)	483, 791, 1473, 1634
MaeI	CTAG	4 cut(s)	909, 1014, 1121, 1220
MaeII	ACGT	1 cut(s)	1239
MaeIII	GTNAC	2 cut(s)	1198, 1415
MalI	GATC	8 cut(s)	139, 329, 450, 531, 643, 718, 1148, 1176
MboI	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
MboII	GAAGA	8 cut(s)	773, 819, 822, 1007, 1149, 1156, 1278, 1556
MfeI	CAATTG	2 cut(s)	743, 801
MflI	RGATCY	4 cut(s)	327, 641, 716, 1174
MhlI	GDGCHC	2 cut(s)	386, 1647
MlsI	TGGCCA	1 cut(s)	1581
MluNI	TGGCCA	1 cut(s)	1581
MlyI	GAGTC	2 cut(s)	215, 773
MmeI	TCCRAC	4 cut(s)	111, 270, 276, 345
Mox20I	TGGCCA	1 cut(s)	1581
MscI	TGGCCA	1 cut(s)	1581
MseI	TTAA	6 cut(s)	444, 585, 705, 984, 1293, 1314
Msp20I	TGGCCA	1 cut(s)	1581
MspA1I	CMGCKG	1 cut(s)	836
MspCI	CTTAAG	1 cut(s)	704
MspR9I	CCNGG	6 cut(s)	534, 850, 1032, 1185, 1303, 1533
MunI	CAATTG	2 cut(s)	743, 801
Mva1269I	GAATGC	1 cut(s)	934
MvaI	CCWGG	4 cut(s)	850, 1032, 1303, 1533
MwoI	GCNNNNNNNGC	8 cut(s)	43, 76, 309, 436, 548, 610, 943, 1057
NciI	CCSGG	2 cut(s)	534, 1185
NdeII	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
NlaIII	CATG	8 cut(s)	367, 399, 1082, 1219, 1279, 1321, 1613, 1636
NlaIV	GGNNCC	5 cut(s)	822, 888, 1059, 1133, 1449
NmeAIII	GCCGAG	5 cut(s)	279, 311, 503, 541, 1376
NmuCI	GTSAC	2 cut(s)	1198, 1415
NspV	TTCGAA	1 cut(s)	1046
PaeR7I	CTCGAG	2 cut(s)	681, 756
PcsI	WCGNNNNNNNCGW	1 cut(s)	227
PctI	GAATGC	1 cut(s)	934
PfeI	GAWTC	3 cut(s)	30, 1391, 1457
PflMI	CCANNNNNTGG	1 cut(s)	1538
PfoI	TCCNGGA	3 cut(s)	532, 848, 1531
PkrI	GCNGC	4 cut(s)	45, 305, 553, 865
Ple19I	CGATCG	1 cut(s)	140
PleI	GAGTC	2 cut(s)	214, 772
PpsI	GAGTC	2 cut(s)	214, 772
Ppu21I	YACGTR	1 cut(s)	1240
PpuMI	RGGWCCY	1 cut(s)	886
PsiI	TTATAA	1 cut(s)	1232
Psp5II	RGGWCCY	1 cut(s)	886
Psp6I	CCWGG	4 cut(s)	848, 1030, 1301, 1531
PspEI	GGTNACC	2 cut(s)	1198, 1415
PspFI	CCCAGC	1 cut(s)	600
PspGI	CCWGG	4 cut(s)	848, 1030, 1301, 1531
PspN4I	GGNNCC	5 cut(s)	822, 888, 1059, 1133, 1449
PspPI	GGNCC	3 cut(s)	886, 1132, 1447
PspPPI	RGGWCCY	1 cut(s)	886
PspXI	VCTCGAGB	1 cut(s)	681
PsuI	RGATCY	4 cut(s)	327, 641, 716, 1174
PvuI	CGATCG	1 cut(s)	140
RgaI	GCGATCGC	1 cut(s)	140
RsaI	GTAC	3 cut(s)	822, 1012, 1083
RsaNI	GTAC	3 cut(s)	821, 1011, 1082
SaqAI	TTAA	6 cut(s)	444, 585, 705, 984, 1293, 1314
SatI	GCNGC	4 cut(s)	44, 304, 552, 864
Sau3AI	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
Sau96I	GGNCC	3 cut(s)	886, 1132, 1447
ScaI	AGTACT	1 cut(s)	1012
SchI	GAGTC	2 cut(s)	215, 773
ScrFI	CCNGG	6 cut(s)	534, 850, 1032, 1185, 1303, 1533
SduI	GDGCHC	2 cut(s)	386, 1647
SfaAI	GCGATCGC	1 cut(s)	140
SfaNI	GCATC	4 cut(s)	483, 791, 1473, 1634
SfcI	CTRYAG	1 cut(s)	400
Sfr274I	CTCGAG	2 cut(s)	681, 756
SfuI	TTCGAA	1 cut(s)	1046
SgfI	GCGATCGC	1 cut(s)	140
SinI	GGWCC	3 cut(s)	886, 1132, 1447
SlaI	CTCGAG	2 cut(s)	681, 756
SmlI	CTYRAG	4 cut(s)	681, 704, 756, 1064
SmoI	CTYRAG	4 cut(s)	681, 704, 756, 1064
SpeI	ACTAGT	1 cut(s)	1013
SsiI	CCGC	5 cut(s)	35, 369, 551, 597, 834
SspI	AATATT	2 cut(s)	657, 1380
SspMI	CTAG	4 cut(s)	909, 1014, 1121, 1220
StyD4I	CCNGG	6 cut(s)	532, 848, 1030, 1183, 1301, 1531
StyI	CCWWGG	3 cut(s)	870, 882, 1477
TaaI	ACNGT	5 cut(s)	63, 317, 353, 778, 1415
TaiI	ACGT	1 cut(s)	1242
TaqI	TCGA	7 cut(s)	204, 221, 491, 682, 689, 757, 1046
TatI	WGTACW	1 cut(s)	1010
TauI	GCSGC	1 cut(s)	554
TfiI	GAWTC	3 cut(s)	30, 1391, 1457
Tru1I	TTAA	6 cut(s)	444, 585, 705, 984, 1293, 1314
Tru9I	TTAA	6 cut(s)	444, 585, 705, 984, 1293, 1314
TscAI	CASTG	3 cut(s)	1111, 1156, 1449
TseFI	GTSAC	2 cut(s)	1198, 1415
TseI	GCWGC	3 cut(s)	43, 303, 863
Tsp45I	GTSAC	2 cut(s)	1198, 1415
TspDTI	ATGAA	7 cut(s)	384, 984, 1067, 1175, 1292, 1598, 1649
TspGWI	ACGGA	1 cut(s)	740
TspRI	CASTG	3 cut(s)	1111, 1156, 1449
Van91I	CCANNNNNTGG	1 cut(s)	1538
Vha464I	CTTAAG	1 cut(s)	704
VpaK11BI	GGWCC	3 cut(s)	886, 1132, 1447
XapI	RAATTY	2 cut(s)	415, 1604
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1567
XhoI	CTCGAG	2 cut(s)	681, 756
XspI	CTAG	4 cut(s)	909, 1014, 1121, 1220
ZrmI	AGTACT	1 cut(s)	1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.