FvH4_2g18560

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0014461
Physical Location & Seq
Forward (+)
15913700 .. 15917085
3386 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g18560.t1

Sequence Viewer

Length: 1656 bp
ATGGGCGGTCTGAGAGAGTCGTGGTGCTTTTGTAAAGGAGTGAGCAAGTCTGAGAAGATGAAGGCGGCCATTTTCTCCGGGAAAGCTCCGGCATTGGTATGGATTTCCGGCGCCGGGAATGGGATCTCCGGTACCGGGTTCTTGATCCACCGTAGTCTACTGTTGACCACCCACGTCAACCTTCCGTCGGTGTCGGCGGCGGAGGGCTCCGAGATCCGGCTGCAAAACGGCGTCGCTGCGAGCCTCGTTCCCCACAGGTTTTTCATCACCAGCTCCGTTTTAGATCTTACTATAGTAGGTTTGGATGCGGCGGATGGAGATTCAAATTCTCAAGGCCACCCCCACTACTTGAAGACCTGCTCTAAACCGAACCTGGATCTGGGAAGTGGAGTTTACCTTCTAGGCTACACCGAGACTAAGGAATTAACAGTTGGCGAAGGTAAGGTAGTTATAGCCACGGACAATCTCATAAAGTTATCAACTGATGGAGTAACATGGAGCCCAGGTTCGGCTGGTTTTGACGTGCAAGGCAACCTTGCATTTATGATATGCGATCCTATGAAACTAGCTACATCTCCAAACACGAAATCCTCATCAACTTCTACGTCATCCTCATCATCATGGAAAAAGGATCATCCTATGCAATTTGGTATCCCCATTCCTATCATATGTGATTGGTTAAATCAACACTGGGAAGGTAGCCTTGATGATCTTAACAAGCCTAAGCTACCACTCATTCGATTAATGTCTACTGGCCAAAAAAGTGACCACTCCTGTGCTTCCTTCACACTGCGGCGGGTTTTCAAGTCAACTGAAGCAGATAACGATGGAACGCCTTCTTCATCAAATACAGTCTCAAAACCTAGAGACCAACTTGGACCAGGCTGTTCTGCTGCAGCAAACACCTTTGAAGAAGAGACCCCAACTGATACTCTTGCAGCCCATGTACAGGGAATTCCTACACCTGAAATATATGAAACACCGAAGTTTACATCTAATCCTCTTCGAAAAAGAGAAGGTTCCCAAGTTCAGCTTTTGGATATTAACTTTCCACCTAGGATTGCTAAACCAGCAATTACACCACAGCCTACCAAAAGATTACCCCGGACTTCTGATGAGAATTTTGTGAAGGAACCTCTACTGCAGAGCCCAAAAAGACAAGAAAATCAAGTCAAGGATAGAGGATCGGCAAGCCCTGCTGCTGATGCTGAGATCGCGTCAGCAGGTTCCGTAGATGAGGCCCATAGTGAGGTTCAGTCTAGTTCATACCCAGTTGAAGCTTCAGATATGCATAATGGGTATAGTAGTGAGGGAGAGACTATGTACTCTGCAGAAACAGCTGAGAGTAGAAATTATCCTAGTCCTCCTGAGGGAAAGTTTCAGCCAGTGGGAAGAAGCCAGAGTTGCGTGAATTACAATAGATGGGGAGCTGTTCAAAGGAATCCAGTGGCTCGTAGGGCGTTGCTAGAACAGCAAAGGAGCTTTATCCATGGAAGGAAAATGTATTCACAAGGGGCAACTTCTCAGAGGAGCAATGACTACTACAGCCCAACTGTGTCATCAATCATGAAGAAGCGAAACTCAGAGCAGCCTATCACTCCTATTGTCAAACCACGGCAAGCTGCTGTTCATTCCTCTCCAAGATGGAACTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

552

Amino Acids

59.77

Weight (kDa)

8.47

Isoelectric Point (pI)

50.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014461)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07210
fragaria_vesca FvH4_2g18560
malus_domestica MD05G1171800.v1.1 MD10G1160100.v1.1
prunus_persica Prupe.8G199200_v2.0.a1
pyrus_communis pycom05g15850 pycom10g13820
rosa_chinensis RchiOBHm_Chr6g0284121
rosa_laevigata RLG00000012768
rosa_multiflora Rmu_sc0003778.1_g000037
rosa_roxburghii Rroxscaffold_7G00184910
rosa_rugosa Rorug06G0161000
rosa_samantha Rh6AG273800 Rh6BG274500 Rh6CG275900 Rh6DG268900
rosa_wichuraiana Rw6G023560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 365, 1214
Acc65I GGTACC 1 cut(s) 131
AccB1I GGYRCC 2 cut(s) 110, 131
AccI GTMKAC 2 cut(s) 157, 749
AccII CGCG 1 cut(s) 1217
AciI CCGC 8 cut(s) 6, 65, 197, 200, 308, 311, 793, 796
AclWI GGATC 7 cut(s) 131, 139, 208, 384, 548, 639, 1192
AcoI YGGCCR 2 cut(s) 66, 754
AcsI RAATTY 3 cut(s) 325, 954, 1120
AcuI CTGAAG 2 cut(s) 834, 1266
AcyI GRCGYC 2 cut(s) 111, 231
AfaI GTAC 3 cut(s) 133, 948, 1325
AgsI TTSAA 6 cut(s) 324, 352, 805, 911, 1277, 1436
AjiI CACGTC 2 cut(s) 175, 523
AjnI CCWGG 3 cut(s) 372, 502, 880
AjuI GAANNNNNNNTTGG 2 cut(s) 414, 446
AleI CACNNNNGTG 1 cut(s) 774
AloI GAACNNNNNNTCC 2 cut(s) 490, 522
Alw26I GTCTC 5 cut(s) 407, 859, 861, 911, 1310
AlwI GGATC 7 cut(s) 131, 139, 208, 384, 548, 639, 1192
AoxI GGCC 4 cut(s) 66, 334, 754, 1239
ApeKI GCWGC 8 cut(s) 220, 236, 893, 896, 938, 1199, 1588, 1622
ApoI RAATTY 3 cut(s) 325, 954, 1120
AseI ATTAAT 1 cut(s) 743
Asp700I GAANNNNTTC 1 cut(s) 835
Asp718I GGTACC 1 cut(s) 131
AspA2I CCTAGG 1 cut(s) 1055
AspLEI GCGC 1 cut(s) 113
AspS9I GGNCC 2 cut(s) 878, 1240
AsuC2I CCSGG 4 cut(s) 79, 115, 136, 1105
AsuHPI GGTGA 1 cut(s) 259
AsuII TTCGAA 1 cut(s) 1006
AvaII GGWCC 1 cut(s) 878
AvrII CCTAGG 1 cut(s) 1055
AxyI CCTNAGG 1 cut(s) 1368
BalI TGGCCA 1 cut(s) 756
BanI GGYRCC 2 cut(s) 110, 131
BanII GRGCYC 3 cut(s) 209, 503, 1151
BbsI GAAGAC 1 cut(s) 359
BbvI GCAGC 8 cut(s) 207, 223, 880, 908, 950, 1186, 1600, 1609
BccI CCATC 5 cut(s) 308, 479, 821, 1416, 1638
BceAI ACGGC 2 cut(s) 244, 1631
BciT130I CCWGG 3 cut(s) 374, 504, 882
BciVI GTATCC 1 cut(s) 662
BcnI CCSGG 4 cut(s) 79, 115, 136, 1105
BcoDI GTCTC 5 cut(s) 407, 859, 861, 911, 1310
BfaI CTAG 7 cut(s) 401, 566, 864, 1056, 1260, 1359, 1466
BfmI CTRYAG 5 cut(s) 291, 894, 1142, 1329, 1543
BfoI RGCGCY 1 cut(s) 114
BfuAI ACCTGC 2 cut(s) 365, 1214
BfuI GTATCC 1 cut(s) 662
BglII AGATCT 1 cut(s) 283
BlnI CCTAGG 1 cut(s) 1055
Bme1390I CCNGG 7 cut(s) 79, 115, 136, 374, 504, 882, 1105
Bme18I GGWCC 1 cut(s) 878
BmgBI CACGTC 2 cut(s) 175, 523
BmgT120I GGNCC 2 cut(s) 878, 1240
BmiI GGNNCC 7 cut(s) 112, 133, 208, 500, 1021, 1134, 1228
BmrFI CCNGG 7 cut(s) 79, 115, 136, 374, 504, 882, 1105
BmrI ACTGGG 2 cut(s) 700, 1265
BmsI GCATC 2 cut(s) 295, 1195
BmuI ACTGGG 2 cut(s) 700, 1265
BpiI GAAGAC 1 cut(s) 359
Bpu10I CCTNAGC 1 cut(s) 723
Bpu14I TTCGAA 1 cut(s) 1006
BpuEI CTTGAG 1 cut(s) 315
BpuMI CCSGG 4 cut(s) 79, 115, 136, 1105
BsaHI GRCGYC 2 cut(s) 111, 231
BsaI GGTCTC 2 cut(s) 861, 911
BsaJI CCNNGG 6 cut(s) 456, 502, 1055, 1103, 1489, 1613
BsaWI WCCGGW 1 cut(s) 128
BsaXI ACNNNNNCTCC 2 cut(s) 490, 520
Bse1I ACTGG 5 cut(s) 695, 757, 1271, 1385, 1445
Bse21I CCTNAGG 1 cut(s) 1368
Bse3DI GCAATG 1 cut(s) 1540
BseBI CCWGG 3 cut(s) 374, 504, 882
BseDI CCNNGG 6 cut(s) 456, 502, 1055, 1103, 1489, 1613
BseGI GGATG 4 cut(s) 310, 319, 608, 634
BseMI GCAATG 1 cut(s) 1540
BseMII CTCAG 6 cut(s) 42, 1200, 1332, 1359, 1538, 1596
BseNI ACTGG 5 cut(s) 695, 757, 1271, 1385, 1445
BseRI GAGGAG 1 cut(s) 1543
BseXI GCAGC 8 cut(s) 207, 223, 880, 908, 950, 1186, 1600, 1609
Bsh1236I CGCG 1 cut(s) 1217
BshFI GGCC 4 cut(s) 68, 336, 756, 1241
BshNI GGYRCC 2 cut(s) 110, 131
BsiSI CCGG 8 cut(s) 78, 89, 108, 114, 129, 135, 217, 1105
BsmAI GTCTC 5 cut(s) 407, 859, 861, 911, 1310
BsnI GGCC 4 cut(s) 68, 336, 756, 1241
Bso31I GGTCTC 2 cut(s) 861, 911
Bsp119I TTCGAA 1 cut(s) 1006
Bsp1286I GDGCHC 3 cut(s) 209, 503, 1151
Bsp1407I TGTACA 1 cut(s) 946
Bsp19I CCATGG 1 cut(s) 1489
BspACI CCGC 8 cut(s) 6, 65, 197, 200, 308, 311, 793, 796
BspANI GGCC 4 cut(s) 68, 336, 756, 1241
BspCNI CTCAG 6 cut(s) 43, 1201, 1333, 1360, 1537, 1595
BspFNI CGCG 1 cut(s) 1217
BspHI TCATGA 1 cut(s) 1566
BspLI GGNNCC 7 cut(s) 112, 133, 208, 500, 1021, 1134, 1228
BspMAI CTGCAG 3 cut(s) 898, 1146, 1333
BspMI ACCTGC 2 cut(s) 365, 1214
BspPI GGATC 7 cut(s) 131, 139, 208, 384, 548, 639, 1192
BspT104I TTCGAA 1 cut(s) 1006
BspT107I GGYRCC 2 cut(s) 110, 131
BspTNI GGTCTC 2 cut(s) 861, 911
BsrDI GCAATG 1 cut(s) 1540
BsrGI TGTACA 1 cut(s) 946
BsrI ACTGG 5 cut(s) 695, 757, 1271, 1385, 1445
BssECI CCNNGG 6 cut(s) 456, 502, 1055, 1103, 1489, 1613
BssNI GRCGYC 2 cut(s) 111, 231
BssT1I CCWWGG 2 cut(s) 1055, 1489
Bst2UI CCWGG 3 cut(s) 374, 504, 882
Bst4CI ACNGT 5 cut(s) 152, 162, 430, 853, 1555
Bst6I CTCTTC 2 cut(s) 909, 1008
BstACI GRCGYC 2 cut(s) 111, 231
BstAPI GCANNNNNTGC 1 cut(s) 1196
BstAUI TGTACA 1 cut(s) 946
BstBI TTCGAA 1 cut(s) 1006
BstC8I GCNNGC 3 cut(s) 241, 1192, 1620
BstDEI CTNAG 9 cut(s) 11, 51, 417, 723, 1209, 1341, 1368, 1524, 1582
BstDSI CCRYGG 3 cut(s) 456, 1489, 1613
BstF5I GGATG 4 cut(s) 310, 319, 608, 634
BstFNI CGCG 1 cut(s) 1217
BstH2I RGCGCY 1 cut(s) 114
BstHHI GCGC 1 cut(s) 113
BstMAI GTCTC 5 cut(s) 407, 859, 861, 911, 1310
BstMWI GCNNNNNNNGC 8 cut(s) 1070, 1196, 1205, 1214, 1337, 1404, 1457, 1471
BstNI CCWGG 3 cut(s) 374, 504, 882
BstSCI CCNGG 7 cut(s) 77, 113, 134, 372, 502, 880, 1103
BstSFI CTRYAG 5 cut(s) 291, 894, 1142, 1329, 1543
BstUI CGCG 1 cut(s) 1217
BstV1I GCAGC 8 cut(s) 207, 223, 880, 908, 950, 1186, 1600, 1609
BstV2I GAAGAC 1 cut(s) 359
BstX2I RGATCY 4 cut(s) 123, 213, 283, 376
BstYI RGATCY 4 cut(s) 123, 213, 283, 376
Bsu36I CCTNAGG 1 cut(s) 1368
BsuI GTATCC 1 cut(s) 662
BsuRI GGCC 4 cut(s) 68, 336, 756, 1241
BtgI CCRYGG 3 cut(s) 456, 1489, 1613
BtrI CACGTC 2 cut(s) 175, 523
BtsCI GGATG 4 cut(s) 310, 319, 608, 634
BtsI GCAGTG 1 cut(s) 788
BtsIMutI CAGTG 4 cut(s) 688, 788, 1392, 1452
BveI ACCTGC 2 cut(s) 365, 1214
Cac8I GCNNGC 3 cut(s) 241, 1192, 1620
CciI TCATGA 1 cut(s) 1566
CfoI GCGC 1 cut(s) 113
Cfr13I GGNCC 2 cut(s) 878, 1240
CseI GACGC 2 cut(s) 220, 1206
Csp6I GTAC 3 cut(s) 132, 947, 1324
CviAII CATG 5 cut(s) 495, 621, 944, 1490, 1567
CviQI GTAC 3 cut(s) 132, 947, 1324
DdeI CTNAG 9 cut(s) 11, 51, 417, 723, 1209, 1341, 1368, 1524, 1582
DinI GGCGCC 1 cut(s) 112
EaeI YGGCCR 2 cut(s) 66, 754
Eam1104I CTCTTC 2 cut(s) 909, 1008
EarI CTCTTC 2 cut(s) 909, 1008
EciI GGCGGA 2 cut(s) 215, 326
Eco130I CCWWGG 2 cut(s) 1055, 1489
Eco24I GRGCYC 3 cut(s) 209, 503, 1151
Eco31I GGTCTC 2 cut(s) 861, 911
Eco47I GGWCC 1 cut(s) 878
Eco57I CTGAAG 2 cut(s) 834, 1266
Eco81I CCTNAGG 1 cut(s) 1368
EcoRI GAATTC 1 cut(s) 954
EcoRII CCWGG 3 cut(s) 372, 502, 880
EcoT14I CCWWGG 2 cut(s) 1055, 1489
EcoT22I ATGCAT 1 cut(s) 1293
EcoT38I GRGCYC 3 cut(s) 209, 503, 1151
EgeI GGCGCC 1 cut(s) 112
EheI GGCGCC 1 cut(s) 112
ErhI CCWWGG 2 cut(s) 1055, 1489
FaeI CATG 5 cut(s) 498, 624, 947, 1493, 1570
FalI AAGNNNNNCTT 6 cut(s) 519, 551, 687, 719, 1017, 1049
FatI CATG 5 cut(s) 494, 620, 943, 1489, 1566
FauI CCCGC 1 cut(s) 789
FauNDI CATATG 1 cut(s) 668
FblI GTMKAC 2 cut(s) 157, 749
FokI GGATG 4 cut(s) 317, 326, 595, 621
FriOI GRGCYC 3 cut(s) 209, 503, 1151
FspBI CTAG 7 cut(s) 401, 566, 864, 1056, 1260, 1359, 1466
GlaI GCGC 1 cut(s) 112
HaeII RGCGCY 1 cut(s) 114
HaeIII GGCC 4 cut(s) 68, 336, 756, 1241
HapII CCGG 8 cut(s) 78, 89, 108, 114, 129, 135, 217, 1105
HgaI GACGC 2 cut(s) 220, 1206
HhaI GCGC 1 cut(s) 113
Hin1I GRCGYC 2 cut(s) 111, 231
Hin1II CATG 5 cut(s) 498, 624, 947, 1493, 1570
Hin6I GCGC 1 cut(s) 111
HinP1I GCGC 1 cut(s) 111
HincII GTYRAC 3 cut(s) 165, 178, 810
HindII GTYRAC 3 cut(s) 165, 178, 810
HindIII AAGCTT 1 cut(s) 1278
HinfI GANTC 3 cut(s) 17, 320, 1441
HpaII CCGG 8 cut(s) 78, 89, 108, 114, 129, 135, 217, 1105
HphI GGTGA 1 cut(s) 259
Hpy166II GTNNAC 7 cut(s) 158, 165, 178, 394, 750, 810, 990
Hpy188I TCNGA 7 cut(s) 12, 52, 211, 1114, 1285, 1527, 1585
Hpy188III TCNNGA 3 cut(s) 142, 1367, 1567
Hpy8I GTNNAC 7 cut(s) 158, 165, 178, 394, 750, 810, 990
Hpy99I CGWCG 2 cut(s) 190, 236
HpyCH4III ACNGT 5 cut(s) 152, 162, 430, 853, 1555
HpyCH4IV ACGT 3 cut(s) 174, 522, 605
HpyCH4V TGCA 9 cut(s) 223, 526, 539, 643, 896, 938, 1144, 1291, 1331
HpyF10VI GCNNNNNNNGC 8 cut(s) 1070, 1196, 1205, 1214, 1337, 1404, 1457, 1471
HpyF3I CTNAG 9 cut(s) 11, 51, 417, 723, 1209, 1341, 1368, 1524, 1582
HpySE526I ACGT 3 cut(s) 174, 522, 605
Hsp92I GRCGYC 2 cut(s) 111, 231
Hsp92II CATG 5 cut(s) 498, 624, 947, 1493, 1570
HspAI GCGC 1 cut(s) 111
KasI GGCGCC 1 cut(s) 110
KpnI GGTACC 1 cut(s) 135
LmnI GCTCC 7 cut(s) 91, 212, 278, 498, 1427, 1479, 1530
Lsp1109I GCAGC 8 cut(s) 207, 223, 880, 908, 950, 1186, 1600, 1609
LweI GCATC 2 cut(s) 295, 1195
MaeI CTAG 7 cut(s) 401, 566, 864, 1056, 1260, 1359, 1466
MaeII ACGT 3 cut(s) 174, 522, 605
MaeIII GTNAC 2 cut(s) 490, 764
MboII GAAGA 8 cut(s) 67, 364, 831, 923, 926, 995, 1404, 1582
MflI RGATCY 4 cut(s) 123, 213, 283, 376
MhlI GDGCHC 3 cut(s) 209, 503, 1151
MlsI TGGCCA 1 cut(s) 756
MluCI AATT 8 cut(s) 325, 422, 644, 954, 1074, 1120, 1351, 1411
MluNI TGGCCA 1 cut(s) 756
Mly113I GGCGCC 1 cut(s) 111
MlyI GAGTC 1 cut(s) 26
Mox20I TGGCCA 1 cut(s) 756
Mph1103I ATGCAT 1 cut(s) 1293
MroXI GAANNNNTTC 1 cut(s) 835
MscI TGGCCA 1 cut(s) 756
MseI TTAA 5 cut(s) 425, 680, 714, 743, 1044
MslI CAYNNNNRTG 3 cut(s) 97, 619, 774
Msp20I TGGCCA 1 cut(s) 756
MspA1I CMGCKG 1 cut(s) 1340
MspI CCGG 8 cut(s) 78, 89, 108, 114, 129, 135, 217, 1105
MspR9I CCNGG 7 cut(s) 79, 115, 136, 374, 504, 882, 1105
MvaI CCWGG 3 cut(s) 374, 504, 882
MvnI CGCG 1 cut(s) 1217
MwoI GCNNNNNNNGC 8 cut(s) 1070, 1196, 1205, 1214, 1337, 1404, 1457, 1471
NarI GGCGCC 1 cut(s) 111
NciI CCSGG 4 cut(s) 79, 115, 136, 1105
NcoI CCATGG 1 cut(s) 1489
NdeI CATATG 1 cut(s) 668
NlaIII CATG 5 cut(s) 498, 624, 947, 1493, 1570
NlaIV GGNNCC 7 cut(s) 112, 133, 208, 500, 1021, 1134, 1228
NmuCI GTSAC 1 cut(s) 764
NsiI ATGCAT 1 cut(s) 1293
NspV TTCGAA 1 cut(s) 1006
OliI CACNNNNGTG 1 cut(s) 774
PagI TCATGA 1 cut(s) 1566
PdmI GAANNNNTTC 1 cut(s) 835
PfeI GAWTC 2 cut(s) 320, 1441
PfoI TCCNGGA 1 cut(s) 77
PleI GAGTC 1 cut(s) 25
PluTI GGCGCC 1 cut(s) 114
PpsI GAGTC 1 cut(s) 25
PshBI ATTAAT 1 cut(s) 743
Psp6I CCWGG 3 cut(s) 372, 502, 880
PspGI CCWGG 3 cut(s) 372, 502, 880
PspN4I GGNNCC 7 cut(s) 112, 133, 208, 500, 1021, 1134, 1228
PspPI GGNCC 2 cut(s) 878, 1240
PstI CTGCAG 3 cut(s) 898, 1146, 1333
PsuI RGATCY 4 cut(s) 123, 213, 283, 376
PvuII CAGCTG 1 cut(s) 1340
RsaI GTAC 3 cut(s) 133, 948, 1325
RsaNI GTAC 3 cut(s) 132, 947, 1324
RseI CAYNNNNRTG 3 cut(s) 97, 619, 774
SaqAI TTAA 5 cut(s) 425, 680, 714, 743, 1044
Sau96I GGNCC 2 cut(s) 878, 1240
SchI GAGTC 1 cut(s) 26
ScrFI CCNGG 7 cut(s) 79, 115, 136, 374, 504, 882, 1105
SduI GDGCHC 3 cut(s) 209, 503, 1151
SfaNI GCATC 2 cut(s) 295, 1195
SfcI CTRYAG 5 cut(s) 291, 894, 1142, 1329, 1543
SfoI GGCGCC 1 cut(s) 112
SfuI TTCGAA 1 cut(s) 1006
SinI GGWCC 1 cut(s) 878
SmiMI CAYNNNNRTG 3 cut(s) 97, 619, 774
SmlI CTYRAG 1 cut(s) 330
SmoI CTYRAG 1 cut(s) 330
Sse9I AATT 8 cut(s) 325, 422, 644, 954, 1074, 1120, 1351, 1411
SsiI CCGC 8 cut(s) 6, 65, 197, 200, 308, 311, 793, 796
SspDI GGCGCC 1 cut(s) 110
SspMI CTAG 7 cut(s) 401, 566, 864, 1056, 1260, 1359, 1466
StyD4I CCNGG 7 cut(s) 77, 113, 134, 372, 502, 880, 1103
StyI CCWWGG 2 cut(s) 1055, 1489
TaaI ACNGT 5 cut(s) 152, 162, 430, 853, 1555
TaiI ACGT 3 cut(s) 177, 525, 608
TaqI TCGA 2 cut(s) 739, 1006
TasI AATT 8 cut(s) 325, 422, 644, 954, 1074, 1120, 1351, 1411
TatI WGTACW 2 cut(s) 946, 1323
TauI GCSGC 4 cut(s) 68, 200, 311, 796
TfiI GAWTC 2 cut(s) 320, 1441
Tru1I TTAA 5 cut(s) 425, 680, 714, 743, 1044
Tru9I TTAA 5 cut(s) 425, 680, 714, 743, 1044
TscAI CASTG 4 cut(s) 695, 795, 1392, 1452
TseFI GTSAC 1 cut(s) 764
TseI GCWGC 8 cut(s) 220, 236, 893, 896, 938, 1199, 1588, 1622
Tsp45I GTSAC 1 cut(s) 764
TspDTI ATGAA 8 cut(s) 74, 253, 575, 831, 990, 1254, 1583, 1619
TspGWI ACGGA 4 cut(s) 174, 265, 473, 1219
TspRI CASTG 4 cut(s) 695, 795, 1392, 1452
VpaK11BI GGWCC 1 cut(s) 878
VspI ATTAAT 1 cut(s) 743
XapI RAATTY 3 cut(s) 325, 954, 1120
XmaJI CCTAGG 1 cut(s) 1055
XmiI GTMKAC 2 cut(s) 157, 749
XmnI GAANNNNTTC 1 cut(s) 835
XspI CTAG 7 cut(s) 401, 566, 864, 1056, 1260, 1359, 1466
Zsp2I ATGCAT 1 cut(s) 1293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.