pycom10g13820

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0014461
Physical Location & Seq
Forward (+)
17319407 .. 17322437
3031 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g13820.1

Sequence Viewer

Length: 1647 bp
ATGGGTGGTCTGAGGGAGTCGTGGTGCTTCTGCAAAGGAGTCAGCAAGTCTGAGAAAATGAAGGCCGCCATTTTCTCCGGCAAGGCTCCGGCCATGGCCATAATTTCCGGCGCCGCAAATGGGATCTCCGGTACGGGATTCCTGATCCACCGTAGTCTACTATTGACCACCCACGTCAACCTTCCGTCTGTGGCGGCCGCCGAGAGCTCCGAGATCCGGCTGCAAAACGGTGTCGCTGCAAGTCTCGTTCCCCAAAGATTTTTCATCACCAGCTCCATTTTAGATCTCACAATAGTAGGTCTGGATGCGGTGGATGGAGATTCAAATGCCCAAGGCCACCTCCACCACTTGAAGACCTGCTCTAAACCAAGCCTGGATCTCGGCAGTGTAGTTTACCTTCTAGGCTACATGGAGAAGAAGGATTTGACAGTTGGTGAAGGTAAGGTAGTGATTGCCACAGACAATCTCATAAAGTTGTCAACTGATGGAGTAACATTGAGCCCGGGTTCAGCTGGATTTGACGCACAAGGGAATCTTGCATTTATGATATGTGATCCCATGAAACTAGCAACATCTCCAAACACCAAATCCTCATCAACTTCCTCATCATCCTCCTCGTCATGGAAGAAGGATCACCCGATGCAATTTGGTATCCCCATTCCAATCATTTGTGATTGGTTAAATCAGCATTGGGAGGGCAGTCTCGATGATCTTAACAAGCCTAAGCTACCACTCATTCGGTTAATGTCTTCTGCCCAGAAAAGCGAACACTCTTGTGCTTCCTTCACACAGCGGCAAGTTTTTAAGTCAACTGAAGGTGATAATGATGGAACAACTTCTTCATCAAATACAATCTCAAAACCTAGGGACCAGCATGGATCAAGCTGCTCTGCTGCCGCAAACACTGTTGAAGAAGAGGCCCTAACAGGTGATCCTCATGCTGCACATTTACAAGGTATTCCTACTCCAGAAATTTATGAATCACCGAAGTTAACAGCTATCCCTCTTCGGAGAAGAGAAGGCTCCCCAGTTCAGCTTTTGGACATTAATTTTCCTCCAAGGGTTGCAAAACCAGCAGTTCTACCACAGTCAACCAAAAAGTTACTCCCGAATTCTGGTGAGAATTTTGTCAGGGAGCCTCCTGAGCATATCCCAGTAAGAGAAGGAAACAGAGTTGAGGATAGAGGACCAGCCAGTCCTGATGCAAATGCTGAAATTGCCTCGACGGGTTCTTTTAATGGGGCCCAAAGTGAGGTTGAGTCTAGTTCATTACCAGTGGATGCTGCAGATAGGCAGAATGGGTATAGTAGTGAGGGAGAGACTATGTACTCTGCTGAAACTGCTGAGAGTCGAAATTATACTACTCCTGCAGATGGAAAGTTTCAACAAGTGGGAAGGAGCCAGAGTTGTGTGAACTATAATAGATGGGGAGCCACCCAAAGTAACCCAGTGCAGCGCAGGGCGTTGCTAGAAAAGCAGAGGAGCTTTATCCATGGAAGGAAGATGCATTCGCAAGCAGCAACTTCTCAAAGGAGCAATGACTACTACAGCCCAACTGTCTCCTCAATCATGAAGAAGCGGAACTCAGAGCAGCCTGTCAGACCCCGGCAAATTGCTGTTCATTCCTCCCCAAAATGGAACTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

549

Amino Acids

59.12

Weight (kDa)

8.31

Isoelectric Point (pI)

52.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014461)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07210
fragaria_vesca FvH4_2g18560
malus_domestica MD05G1171800.v1.1 MD10G1160100.v1.1
prunus_persica Prupe.8G199200_v2.0.a1
pyrus_communis pycom05g15850 pycom10g13820
rosa_chinensis RchiOBHm_Chr6g0284121
rosa_laevigata RLG00000012768
rosa_multiflora Rmu_sc0003778.1_g000037
rosa_roxburghii Rroxscaffold_7G00184910
rosa_rugosa Rorug06G0161000
rosa_samantha Rh6AG273800 Rh6BG274500 Rh6CG275900 Rh6DG268900
rosa_wichuraiana Rw6G023560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1194
Acc36I ACCTGC 1 cut(s) 365
AccB1I GGYRCC 1 cut(s) 110
AccI GTMKAC 1 cut(s) 157
AciI CCGC 8 cut(s) 66, 114, 194, 198, 308, 793, 897, 1579
AclWI GGATC 8 cut(s) 131, 139, 208, 384, 548, 639, 886, 926
AcoI YGGCCR 3 cut(s) 90, 96, 195
AcsI RAATTY 3 cut(s) 972, 1111, 1123
AcuI CTGAAG 1 cut(s) 834
AcyI GRCGYC 1 cut(s) 111
AfaI GTAC 2 cut(s) 133, 1328
AfiI CCNNNNNNNGG 7 cut(s) 120, 216, 621, 1115, 1252, 1373, 1635
AgsI TTSAA 4 cut(s) 324, 352, 911, 1385
AjiI CACGTC 1 cut(s) 175
AjnI CCWGG 1 cut(s) 372
AleI CACNNNNGTG 1 cut(s) 774
AluBI AGCT 8 cut(s) 207, 273, 512, 727, 885, 998, 1036, 1485
AluI AGCT 8 cut(s) 207, 273, 512, 727, 885, 998, 1036, 1485
Alw21I GWGCWC 1 cut(s) 209
Alw26I GTCTC 4 cut(s) 248, 707, 1313, 1564
AlwI GGATC 8 cut(s) 131, 139, 208, 384, 548, 639, 886, 926
Ama87I CYCGRG 1 cut(s) 502
AoxI GGCC 7 cut(s) 63, 90, 96, 195, 334, 918, 1242
ApaI GGGCCC 1 cut(s) 1246
ApeKI GCWGC 9 cut(s) 220, 236, 885, 893, 941, 1283, 1453, 1517, 1591
ApoI RAATTY 3 cut(s) 972, 1111, 1123
AseI ATTAAT 1 cut(s) 1047
Asp700I GAANNNNTTC 1 cut(s) 835
AspA2I CCTAGG 1 cut(s) 863
AspLEI GCGC 2 cut(s) 113, 1458
AspS9I GGNCC 5 cut(s) 868, 919, 1187, 1242, 1243
AsuC2I CCSGG 3 cut(s) 503, 504, 1606
AsuHPI GGTGA 7 cut(s) 259, 446, 626, 830, 941, 975, 1130
AvaI CYCGRG 1 cut(s) 502
AvaII GGWCC 2 cut(s) 868, 1187
AvrII CCTAGG 1 cut(s) 863
BaeGI GKGCMC 1 cut(s) 1246
BalI TGGCCA 1 cut(s) 98
BanI GGYRCC 1 cut(s) 110
BanII GRGCYC 3 cut(s) 209, 503, 1246
BarI GAAGNNNNNNTAC 2 cut(s) 381, 413
BbsI GAAGAC 2 cut(s) 359, 741
Bbv12I GWGCWC 1 cut(s) 209
BbvI GCAGC 9 cut(s) 207, 223, 872, 880, 928, 1270, 1465, 1529, 1603
BccI CCATC 5 cut(s) 308, 479, 821, 1367, 1419
BciT130I CCWGG 1 cut(s) 374
BciVI GTATCC 1 cut(s) 662
BcnI CCSGG 3 cut(s) 503, 504, 1606
BcoDI GTCTC 4 cut(s) 248, 707, 1313, 1564
BfaI CTAG 5 cut(s) 401, 566, 864, 1263, 1469
BfmI CTRYAG 3 cut(s) 1284, 1368, 1546
BfoI RGCGCY 1 cut(s) 114
BfuAI ACCTGC 1 cut(s) 365
BfuI GTATCC 1 cut(s) 662
BglII AGATCT 1 cut(s) 283
BlnI CCTAGG 1 cut(s) 863
Bme1390I CCNGG 4 cut(s) 374, 503, 504, 1606
Bme18I GGWCC 2 cut(s) 868, 1187
BmeT110I CYCGRG 1 cut(s) 502
BmgBI CACGTC 1 cut(s) 175
BmgT120I GGNCC 5 cut(s) 868, 919, 1187, 1242, 1243
BmiI GGNNCC 9 cut(s) 87, 112, 869, 1024, 1137, 1243, 1244, 1400, 1432
BmrFI CCNGG 4 cut(s) 374, 503, 504, 1606
BmrI ACTGGG 3 cut(s) 1022, 1148, 1442
BmsI GCATC 5 cut(s) 295, 630, 1192, 1270, 1494
BmuI ACTGGG 3 cut(s) 1022, 1148, 1442
BpiI GAAGAC 2 cut(s) 359, 741
BpmI CTGGAG 1 cut(s) 951
Bpu10I CCTNAGC 2 cut(s) 723, 1143
BpuMI CCSGG 3 cut(s) 503, 504, 1606
BsaHI GRCGYC 1 cut(s) 111
BsaJI CCNNGG 7 cut(s) 93, 331, 502, 863, 1058, 1492, 1604
BsaWI WCCGGW 1 cut(s) 128
BsaXI ACNNNNNCTCC 4 cut(s) 8, 38, 1390, 1420
Bsc4I CCNNNNNNNGG 7 cut(s) 120, 216, 621, 1115, 1252, 1373, 1635
Bse1I ACTGG 5 cut(s) 1028, 1154, 1194, 1274, 1448
Bse3DI GCAATG 1 cut(s) 1543
BseBI CCWGG 1 cut(s) 374
BseDI CCNNGG 7 cut(s) 93, 331, 502, 863, 1058, 1492, 1604
BseGI GGATG 4 cut(s) 310, 319, 608, 1285
BseLI CCNNNNNNNGG 7 cut(s) 120, 216, 621, 1115, 1252, 1373, 1635
BseMI GCAATG 1 cut(s) 1543
BseMII CTCAG 4 cut(s) 42, 1134, 1335, 1599
BseNI ACTGG 5 cut(s) 1028, 1154, 1194, 1274, 1448
BseRI GAGGAG 3 cut(s) 604, 1495, 1552
BseSI GKGCMC 1 cut(s) 1246
BseX3I CGGCCG 1 cut(s) 195
BseXI GCAGC 9 cut(s) 207, 223, 872, 880, 928, 1270, 1465, 1529, 1603
BsgI GTGCAG 2 cut(s) 927, 1472
Bsh1285I CGRYCG 1 cut(s) 198
BshFI GGCC 7 cut(s) 65, 92, 98, 197, 336, 920, 1244
BshNI GGYRCC 1 cut(s) 110
BsiEI CGRYCG 1 cut(s) 198
BsiHKAI GWGCWC 1 cut(s) 209
BsiHKCI CYCGRG 1 cut(s) 502
BsiSI CCGG 7 cut(s) 78, 89, 108, 129, 217, 503, 1606
BslFI GGGAC 1 cut(s) 881
BslI CCNNNNNNNGG 7 cut(s) 120, 216, 621, 1115, 1252, 1373, 1635
BsmAI GTCTC 4 cut(s) 248, 707, 1313, 1564
BsmFI GGGAC 1 cut(s) 881
BsmI GAATGC 1 cut(s) 1507
BsnI GGCC 7 cut(s) 65, 92, 98, 197, 336, 920, 1244
BsoBI CYCGRG 1 cut(s) 502
Bsp120I GGGCCC 1 cut(s) 1242
Bsp1286I GDGCHC 3 cut(s) 209, 503, 1246
Bsp19I CCATGG 2 cut(s) 93, 1492
BspACI CCGC 8 cut(s) 66, 114, 194, 198, 308, 793, 897, 1579
BspANI GGCC 7 cut(s) 65, 92, 98, 197, 336, 920, 1244
BspCNI CTCAG 4 cut(s) 43, 1135, 1336, 1598
BspHI TCATGA 1 cut(s) 1569
BspLI GGNNCC 9 cut(s) 87, 112, 869, 1024, 1137, 1243, 1244, 1400, 1432
BspMAI CTGCAG 2 cut(s) 1288, 1372
BspMI ACCTGC 1 cut(s) 365
BspPI GGATC 8 cut(s) 131, 139, 208, 384, 548, 639, 886, 926
BspT107I GGYRCC 1 cut(s) 110
BsrDI GCAATG 1 cut(s) 1543
BsrI ACTGG 5 cut(s) 1028, 1154, 1194, 1274, 1448
BssECI CCNNGG 7 cut(s) 93, 331, 502, 863, 1058, 1492, 1604
BssNI GRCGYC 1 cut(s) 111
BssT1I CCWWGG 5 cut(s) 93, 331, 863, 1058, 1492
Bst2UI CCWGG 1 cut(s) 374
Bst4CI ACNGT 6 cut(s) 152, 230, 430, 907, 1089, 1558
Bst6I CTCTTC 3 cut(s) 909, 1009, 1011
BstACI GRCGYC 1 cut(s) 111
BstC8I GCNNGC 1 cut(s) 1515
BstDEI CTNAG 6 cut(s) 11, 51, 723, 1143, 1344, 1585
BstDSI CCRYGG 2 cut(s) 93, 1492
BstF5I GGATG 4 cut(s) 310, 319, 608, 1285
BstH2I RGCGCY 1 cut(s) 114
BstHHI GCGC 2 cut(s) 113, 1458
BstMAI GTCTC 4 cut(s) 248, 707, 1313, 1564
BstMCI CGRYCG 1 cut(s) 198
BstMWI GCNNNNNNNGC 5 cut(s) 1073, 1144, 1217, 1340, 1474
BstNI CCWGG 1 cut(s) 374
BstSCI CCNGG 4 cut(s) 372, 501, 502, 1604
BstSFI CTRYAG 3 cut(s) 1284, 1368, 1546
BstSLI GKGCMC 1 cut(s) 1246
BstV1I GCAGC 9 cut(s) 207, 223, 872, 880, 928, 1270, 1465, 1529, 1603
BstV2I GAAGAC 2 cut(s) 359, 741
BstX2I RGATCY 4 cut(s) 123, 213, 283, 376
BstYI RGATCY 4 cut(s) 123, 213, 283, 376
BstZI CGGCCG 1 cut(s) 195
BsuI GTATCC 1 cut(s) 662
BsuRI GGCC 7 cut(s) 65, 92, 98, 197, 336, 920, 1244
BtgI CCRYGG 2 cut(s) 93, 1492
BtrI CACGTC 1 cut(s) 175
BtsCI GGATG 4 cut(s) 310, 319, 608, 1285
BtsI GCAGTG 1 cut(s) 391
BtsIMutI CAGTG 4 cut(s) 391, 903, 1281, 1455
BveI ACCTGC 1 cut(s) 365
Cac8I GCNNGC 1 cut(s) 1515
CciI TCATGA 1 cut(s) 1569
CciNI GCGGCCGC 1 cut(s) 195
CfoI GCGC 2 cut(s) 113, 1458
Cfr13I GGNCC 5 cut(s) 868, 919, 1187, 1242, 1243
Cfr9I CCCGGG 1 cut(s) 502
CseI GACGC 1 cut(s) 530
Csp6I GTAC 2 cut(s) 132, 1327
CviAII CATG 8 cut(s) 94, 409, 559, 621, 875, 938, 1493, 1570
CviQI GTAC 2 cut(s) 132, 1327
DdeI CTNAG 6 cut(s) 11, 51, 723, 1143, 1344, 1585
DinI GGCGCC 1 cut(s) 112
DrdI GACNNNNNNGTC 1 cut(s) 1194
DseDI GACNNNNNNGTC 1 cut(s) 1194
EaeI YGGCCR 3 cut(s) 90, 96, 195
EagI CGGCCG 1 cut(s) 195
Eam1104I CTCTTC 3 cut(s) 909, 1009, 1011
EarI CTCTTC 3 cut(s) 909, 1009, 1011
Ecl136II GAGCTC 1 cut(s) 207
EclXI CGGCCG 1 cut(s) 195
Eco130I CCWWGG 5 cut(s) 93, 331, 863, 1058, 1492
Eco24I GRGCYC 3 cut(s) 209, 503, 1246
Eco47I GGWCC 2 cut(s) 868, 1187
Eco52I CGGCCG 1 cut(s) 195
Eco53kI GAGCTC 1 cut(s) 207
Eco57I CTGAAG 1 cut(s) 834
Eco88I CYCGRG 1 cut(s) 502
EcoICRI GAGCTC 1 cut(s) 207
EcoO109I RGGNCCY 2 cut(s) 919, 1242
EcoRI GAATTC 1 cut(s) 1111
EcoRII CCWGG 1 cut(s) 372
EcoT14I CCWWGG 5 cut(s) 93, 331, 863, 1058, 1492
EcoT22I ATGCAT 1 cut(s) 1509
EcoT38I GRGCYC 3 cut(s) 209, 503, 1246
EgeI GGCGCC 1 cut(s) 112
EheI GGCGCC 1 cut(s) 112
ErhI CCWWGG 5 cut(s) 93, 331, 863, 1058, 1492
FaeI CATG 8 cut(s) 97, 412, 562, 624, 878, 941, 1496, 1573
FalI AAGNNNNNCTT 2 cut(s) 519, 551
FaqI GGGAC 1 cut(s) 881
FatI CATG 8 cut(s) 93, 408, 558, 620, 874, 937, 1492, 1569
FblI GTMKAC 1 cut(s) 157
FokI GGATG 4 cut(s) 317, 326, 595, 1292
FriOI GRGCYC 3 cut(s) 209, 503, 1246
FspBI CTAG 5 cut(s) 401, 566, 864, 1263, 1469
GlaI GCGC 2 cut(s) 112, 1457
GsuI CTGGAG 1 cut(s) 951
HaeII RGCGCY 1 cut(s) 114
HaeIII GGCC 7 cut(s) 65, 92, 98, 197, 336, 920, 1244
HapII CCGG 7 cut(s) 78, 89, 108, 129, 217, 503, 1606
HgaI GACGC 1 cut(s) 530
HhaI GCGC 2 cut(s) 113, 1458
Hin1I GRCGYC 1 cut(s) 111
Hin1II CATG 8 cut(s) 97, 412, 562, 624, 878, 941, 1496, 1573
Hin6I GCGC 2 cut(s) 111, 1456
HinP1I GCGC 2 cut(s) 111, 1456
HincII GTYRAC 5 cut(s) 178, 480, 810, 993, 1092
HindII GTYRAC 5 cut(s) 178, 480, 810, 993, 1092
HinfI GANTC 8 cut(s) 17, 39, 138, 320, 532, 980, 1259, 1348
HpaI GTTAAC 1 cut(s) 993
HpaII CCGG 7 cut(s) 78, 89, 108, 129, 217, 503, 1606
HphI GGTGA 7 cut(s) 259, 446, 626, 830, 941, 975, 1130
Hpy166II GTNNAC 8 cut(s) 158, 178, 394, 480, 810, 993, 1092, 1414
Hpy188I TCNGA 7 cut(s) 12, 52, 211, 1011, 1588, 1601, 1646
Hpy188III TCNNGA 8 cut(s) 142, 302, 704, 968, 1108, 1142, 1199, 1570
Hpy8I GTNNAC 8 cut(s) 158, 178, 394, 480, 810, 993, 1092, 1414
Hpy99I CGWCG 1 cut(s) 1228
HpyCH4III ACNGT 6 cut(s) 152, 230, 430, 907, 1089, 1558
HpyCH4IV ACGT 1 cut(s) 174
HpyF10VI GCNNNNNNNGC 5 cut(s) 1073, 1144, 1217, 1340, 1474
HpyF3I CTNAG 6 cut(s) 11, 51, 723, 1143, 1344, 1585
HpySE526I ACGT 1 cut(s) 174
Hsp92I GRCGYC 1 cut(s) 111
Hsp92II CATG 8 cut(s) 97, 412, 562, 624, 878, 941, 1496, 1573
HspAI GCGC 2 cut(s) 111, 1456
KasI GGCGCC 1 cut(s) 110
KspAI GTTAAC 1 cut(s) 993
LmnI GCTCC 9 cut(s) 91, 212, 278, 1028, 1135, 1398, 1430, 1482, 1533
Lsp1109I GCAGC 9 cut(s) 207, 223, 872, 880, 928, 1270, 1465, 1529, 1603
LweI GCATC 5 cut(s) 295, 630, 1192, 1270, 1494
MaeI CTAG 5 cut(s) 401, 566, 864, 1263, 1469
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 3 cut(s) 490, 1101, 1442
MflI RGATCY 4 cut(s) 123, 213, 283, 376
MhlI GDGCHC 3 cut(s) 209, 503, 1246
MlsI TGGCCA 1 cut(s) 98
MluCI AATT 9 cut(s) 102, 644, 972, 1048, 1111, 1123, 1215, 1354, 1611
MluNI TGGCCA 1 cut(s) 98
Mly113I GGCGCC 1 cut(s) 111
MlyI GAGTC 4 cut(s) 26, 48, 1268, 1357
Mox20I TGGCCA 1 cut(s) 98
Mph1103I ATGCAT 1 cut(s) 1509
MroXI GAANNNNTTC 1 cut(s) 835
MscI TGGCCA 1 cut(s) 98
MseI TTAA 7 cut(s) 680, 714, 743, 804, 992, 1047, 1236
MslI CAYNNNNRTG 1 cut(s) 774
Msp20I TGGCCA 1 cut(s) 98
MspA1I CMGCKG 2 cut(s) 512, 793
MspI CCGG 7 cut(s) 78, 89, 108, 129, 217, 503, 1606
MspR9I CCNGG 4 cut(s) 374, 503, 504, 1606
Mva1269I GAATGC 1 cut(s) 1507
MvaI CCWGG 1 cut(s) 374
MwoI GCNNNNNNNGC 5 cut(s) 1073, 1144, 1217, 1340, 1474
NarI GGCGCC 1 cut(s) 111
NciI CCSGG 3 cut(s) 503, 504, 1606
NcoI CCATGG 2 cut(s) 93, 1492
NlaIII CATG 8 cut(s) 97, 412, 562, 624, 878, 941, 1496, 1573
NlaIV GGNNCC 9 cut(s) 87, 112, 869, 1024, 1137, 1243, 1244, 1400, 1432
NmeAIII GCCGAG 2 cut(s) 226, 360
NotI GCGGCCGC 1 cut(s) 195
NsiI ATGCAT 1 cut(s) 1509
OliI CACNNNNGTG 1 cut(s) 774
PagI TCATGA 1 cut(s) 1569
PctI GAATGC 1 cut(s) 1507
PdmI GAANNNNTTC 1 cut(s) 835
PfeI GAWTC 4 cut(s) 138, 320, 532, 980
PleI GAGTC 4 cut(s) 25, 47, 1267, 1356
PluTI GGCGCC 1 cut(s) 114
PpsI GAGTC 4 cut(s) 25, 47, 1267, 1356
PshBI ATTAAT 1 cut(s) 1047
Psp124BI GAGCTC 1 cut(s) 209
Psp6I CCWGG 1 cut(s) 372
PspGI CCWGG 1 cut(s) 372
PspN4I GGNNCC 9 cut(s) 87, 112, 869, 1024, 1137, 1243, 1244, 1400, 1432
PspOMI GGGCCC 1 cut(s) 1242
PspPI GGNCC 5 cut(s) 868, 919, 1187, 1242, 1243
PstI CTGCAG 2 cut(s) 1288, 1372
PsuI RGATCY 4 cut(s) 123, 213, 283, 376
PvuII CAGCTG 1 cut(s) 512
RsaI GTAC 2 cut(s) 133, 1328
RsaNI GTAC 2 cut(s) 132, 1327
RseI CAYNNNNRTG 1 cut(s) 774
SacI GAGCTC 1 cut(s) 209
SaqAI TTAA 7 cut(s) 680, 714, 743, 804, 992, 1047, 1236
Sau96I GGNCC 5 cut(s) 868, 919, 1187, 1242, 1243
SchI GAGTC 4 cut(s) 26, 48, 1268, 1357
ScrFI CCNGG 4 cut(s) 374, 503, 504, 1606
SduI GDGCHC 3 cut(s) 209, 503, 1246
SfaNI GCATC 5 cut(s) 295, 630, 1192, 1270, 1494
SfcI CTRYAG 3 cut(s) 1284, 1368, 1546
SfoI GGCGCC 1 cut(s) 112
SinI GGWCC 2 cut(s) 868, 1187
SmaI CCCGGG 1 cut(s) 504
SmiMI CAYNNNNRTG 1 cut(s) 774
Sse9I AATT 9 cut(s) 102, 644, 972, 1048, 1111, 1123, 1215, 1354, 1611
SsiI CCGC 8 cut(s) 66, 114, 194, 198, 308, 793, 897, 1579
SspDI GGCGCC 1 cut(s) 110
SspMI CTAG 5 cut(s) 401, 566, 864, 1263, 1469
SstI GAGCTC 1 cut(s) 209
StyD4I CCNGG 4 cut(s) 372, 501, 502, 1604
StyI CCWWGG 5 cut(s) 93, 331, 863, 1058, 1492
TaaI ACNGT 6 cut(s) 152, 230, 430, 907, 1089, 1558
TaiI ACGT 1 cut(s) 177
TaqI TCGA 3 cut(s) 705, 1223, 1351
TasI AATT 9 cut(s) 102, 644, 972, 1048, 1111, 1123, 1215, 1354, 1611
TatI WGTACW 1 cut(s) 1326
TauI GCSGC 6 cut(s) 68, 116, 197, 200, 796, 899
TfiI GAWTC 4 cut(s) 138, 320, 532, 980
Tru1I TTAA 7 cut(s) 680, 714, 743, 804, 992, 1047, 1236
Tru9I TTAA 7 cut(s) 680, 714, 743, 804, 992, 1047, 1236
TscAI CASTG 4 cut(s) 391, 910, 1281, 1455
TseI GCWGC 9 cut(s) 220, 236, 885, 893, 941, 1283, 1453, 1517, 1591
TspDTI ATGAA 8 cut(s) 74, 253, 575, 831, 993, 1257, 1586, 1610
TspGWI ACGGA 1 cut(s) 174
TspMI CCCGGG 1 cut(s) 502
TspRI CASTG 4 cut(s) 391, 910, 1281, 1455
VpaK11BI GGWCC 2 cut(s) 868, 1187
VspI ATTAAT 1 cut(s) 1047
XapI RAATTY 3 cut(s) 972, 1111, 1123
XmaI CCCGGG 1 cut(s) 502
XmaJI CCTAGG 1 cut(s) 863
XmiI GTMKAC 1 cut(s) 157
XmnI GAANNNNTTC 1 cut(s) 835
XspI CTAG 5 cut(s) 401, 566, 864, 1263, 1469
Zsp2I ATGCAT 1 cut(s) 1509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.