MD05G1171800.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0014461
Physical Location & Seq
Forward (+)
30067320 .. 30070915
3596 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1171800.v1.1.491

Sequence Viewer

Length: 1647 bp
ATGGGTGGTCTCAGAGAGTCATGGTGCTTCTGCAAGGGAGTGAGCAAGTCTGAGAAGATGAAAGCCGCCATTTTCTCCGGCAAGGCTCCGGCCATGGCCAGAATTTCCGGTGCCGCAAATGGGATCTCTGGCACCGGATTTCTGATCCATCGTAGTCTACTATTGACCACCCACGTCAACCTTCCGTCTGTAGCGGCTGCCGAGAGCTCCGAGATCCGGCTGCAAAACGGTGTCGCTGCAACTCTCGTTCCCCAAAGATTTTTTATCACCAGTTCCATCTTGGATCTTACAATAGTAGGTTTGGATGCGGTAGATGGAGATTCAACTGCCCAAGGGCACCTCCACCACTTGAGGACCTGCTCTAAACCAAACCTGGATCTTGGCAGTGTAGTTTACCTTCTTGGCTACACGGAGAAGAAGGAATTGACAGTTGGTGAAGGTAAGGTAGTGATAGCCACAGACAATCTCATAAAATTGTCAACTGATGGAGTAATGTGGAGCCCTGGTTCAGCTGGATTCGATGCACAAGGGAATCTTGCATTTATGATGTGTGATCCTATGAAACTAGCAACATCTCCAAACACCAAATCCTCATCAACTTCCTCATCATCCTCGTCATCATGGAAGAAGGATCATCCAATGCAATTTGGTATCCCCATTCCAATCATTTGTGATTGGTTAAATCAACATTGGGAAGGCAGCCTCGATGATCTTAACAAGCCTAAGCTACCACTTATTCGGTTGATGTCTTCTGGCCAGAAAAGTGAGCACTCTTGTGCTTCCTTCACGCAGCGGCGAGTTTTTAAGTCAACTGAAGGTGACAATGATGGAACACCATCTTCATCAAATACAACCTCAAAACCTGGGGACCAGCTAGGACCAAGCTGCTCTGCTGCCGCAAACACTGTTGATGAAGAGGCCCTAACAAGTGATCGTCATGCTGCACATGTACAAGGCATTCCTACTCCAGAAATCTATGAATCACCAAAGTTAACAGCTATTCCTCTTTGGAGAAAAGAAGGTTCCCCAGTTCAGCTTTTGGACATTAATTTTCCTCCAAGGGTTGCAAAACCAACAGTTCAACCACAGTCAACCAAAAAGTTACCCCCAAATTCTGGTGAGAATTTTGTCAAGGAGCCTCCCGAGCAGATCCGATTAAGAGAAGGATACAGAGTTGAAGATAGAGGACCAGCCAGTCCTAATGCAAATGCTGAAATTGCCTCAACGGGTTCATTTAATGGGGCCCAAAGTGAGGTTGAGTCTAGTTCATTCCCAGTAGATGTTTCAGATTTGCACAATGGGTATAGCAGTGAGGGAGAGACTATGTACTCCGCCGAAACTGCTGAGAGTCGAAATTATACTATTCCTGCAGATGGAAAGTTTCAAGAAGTGGGAAGGAGCCAGAGTTTTGTGAACTATAATAGATGGGGAGCCACCCAAAGTAACCCAGTGCAGCGCAGGGCGTTGCTAGAAAATCAGAGAAGCTTTATCCATGGAGGGAAGATGCATTCGCAAGCTGCAACTTCTCAAAGGAGCAATGACTACTACAGCCCAACTGTCTCCTCAATCATGAAGAAGCGCAACTCCGAGCAGCCTGTCAGACCCCGGCAAAGTGCCGTTCATTCCTCTCCGAAATGGAACTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

549

Amino Acids

59.34

Weight (kDa)

8.07

Isoelectric Point (pI)

50.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014461)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07210
fragaria_vesca FvH4_2g18560
malus_domestica MD05G1171800.v1.1 MD10G1160100.v1.1
prunus_persica Prupe.8G199200_v2.0.a1
pyrus_communis pycom05g15850 pycom10g13820
rosa_chinensis RchiOBHm_Chr6g0284121
rosa_laevigata RLG00000012768
rosa_multiflora Rmu_sc0003778.1_g000037
rosa_roxburghii Rroxscaffold_7G00184910
rosa_rugosa Rorug06G0161000
rosa_samantha Rh6AG273800 Rh6BG274500 Rh6CG275900 Rh6DG268900
rosa_wichuraiana Rw6G023560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1194
Acc36I ACCTGC 1 cut(s) 365
AccB1I GGYRCC 3 cut(s) 110, 131, 336
AccB7I CCANNNNNTGG 1 cut(s) 1115
AccI GTMKAC 1 cut(s) 157
AciI CCGC 7 cut(s) 66, 114, 194, 308, 793, 897, 1332
AclWI GGATC 8 cut(s) 131, 139, 208, 291, 384, 548, 639, 1144
AcoI YGGCCR 3 cut(s) 90, 96, 754
AcsI RAATTY 3 cut(s) 102, 1111, 1123
AcuI CTGAAG 1 cut(s) 834
AfaI GTAC 2 cut(s) 951, 1328
AfiI CCNNNNNNNGG 5 cut(s) 120, 216, 1115, 1252, 1373
AflIII ACRYGT 1 cut(s) 946
AgsI TTSAA 4 cut(s) 324, 1082, 1178, 1385
AjiI CACGTC 1 cut(s) 175
AjnI CCWGG 3 cut(s) 372, 502, 862
AjuI GAANNNNNNNTTGG 2 cut(s) 414, 446
AleI CACNNNNGTG 1 cut(s) 774
AloI GAACNNNNNNTCC 2 cut(s) 490, 522
AluBI AGCT 9 cut(s) 207, 512, 727, 874, 885, 998, 1036, 1485, 1517
AluI AGCT 9 cut(s) 207, 512, 727, 874, 885, 998, 1036, 1485, 1517
Alw21I GWGCWC 2 cut(s) 209, 771
Alw26I GTCTC 3 cut(s) 14, 1313, 1564
AlwI GGATC 8 cut(s) 131, 139, 208, 291, 384, 548, 639, 1144
Ama87I CYCGRG 1 cut(s) 1142
AoxI GGCC 5 cut(s) 90, 96, 754, 918, 1242
ApaI GGGCCC 1 cut(s) 1246
ApoI RAATTY 3 cut(s) 102, 1111, 1123
AseI ATTAAT 1 cut(s) 1047
AspLEI GCGC 2 cut(s) 1458, 1581
AspS9I GGNCC 7 cut(s) 354, 868, 878, 919, 1187, 1242, 1243
AsuC2I CCSGG 1 cut(s) 1606
AsuHPI GGTGA 5 cut(s) 259, 446, 830, 975, 1130
AvaI CYCGRG 1 cut(s) 1142
AvaII GGWCC 4 cut(s) 354, 868, 878, 1187
BaeGI GKGCMC 2 cut(s) 339, 1246
BalI TGGCCA 2 cut(s) 98, 756
BanI GGYRCC 3 cut(s) 110, 131, 336
BanII GRGCYC 3 cut(s) 209, 503, 1246
BarI GAAGNNNNNNTAC 2 cut(s) 381, 413
BbsI GAAGAC 1 cut(s) 741
Bbv12I GWGCWC 2 cut(s) 209, 771
BccI CCATC 8 cut(s) 156, 284, 308, 479, 821, 844, 1367, 1419
BceAI ACGGC 1 cut(s) 1601
BciT130I CCWGG 3 cut(s) 374, 504, 864
BciVI GTATCC 2 cut(s) 662, 1160
BcnI CCSGG 1 cut(s) 1606
BcoDI GTCTC 3 cut(s) 14, 1313, 1564
BfaI CTAG 4 cut(s) 566, 875, 1263, 1469
BfmI CTRYAG 3 cut(s) 189, 1368, 1546
BfuAI ACCTGC 1 cut(s) 365
BfuI GTATCC 2 cut(s) 662, 1160
Bme1390I CCNGG 4 cut(s) 374, 504, 864, 1606
Bme18I GGWCC 4 cut(s) 354, 868, 878, 1187
BmeT110I CYCGRG 1 cut(s) 1142
BmgBI CACGTC 1 cut(s) 175
BmgT120I GGNCC 7 cut(s) 354, 868, 878, 919, 1187, 1242, 1243
BmrFI CCNGG 4 cut(s) 374, 504, 864, 1606
BmrI ACTGGG 3 cut(s) 1022, 1268, 1442
BmsI GCATC 3 cut(s) 295, 511, 1494
BmuI ACTGGG 3 cut(s) 1022, 1268, 1442
BpiI GAAGAC 1 cut(s) 741
BpmI CTGGAG 1 cut(s) 951
Bpu10I CCTNAGC 1 cut(s) 723
BpuEI CTTGAG 1 cut(s) 370
BpuMI CCSGG 1 cut(s) 1606
BsaI GGTCTC 1 cut(s) 14
BsaJI CCNNGG 7 cut(s) 93, 331, 502, 863, 1058, 1492, 1604
BsaWI WCCGGW 2 cut(s) 107, 134
BsaXI ACNNNNNCTCC 4 cut(s) 490, 520, 1390, 1420
Bsc4I CCNNNNNNNGG 5 cut(s) 120, 216, 1115, 1252, 1373
Bse1I ACTGG 5 cut(s) 270, 1028, 1194, 1274, 1448
Bse3DI GCAATG 1 cut(s) 1543
BseBI CCWGG 3 cut(s) 374, 504, 864
BseDI CCNNGG 7 cut(s) 93, 331, 502, 863, 1058, 1492, 1604
BseGI GGATG 3 cut(s) 310, 608, 634
BseLI CCNNNNNNNGG 5 cut(s) 120, 216, 1115, 1252, 1373
BseMI GCAATG 1 cut(s) 1543
BseMII CTCAG 3 cut(s) 25, 42, 1335
BseNI ACTGG 5 cut(s) 270, 1028, 1194, 1274, 1448
BseRI GAGGAG 1 cut(s) 1552
BseSI GKGCMC 2 cut(s) 339, 1246
BsgI GTGCAG 2 cut(s) 927, 1472
BshFI GGCC 5 cut(s) 92, 98, 756, 920, 1244
BshNI GGYRCC 3 cut(s) 110, 131, 336
BsiHKAI GWGCWC 2 cut(s) 209, 771
BsiHKCI CYCGRG 1 cut(s) 1142
BsiSI CCGG 6 cut(s) 78, 89, 108, 135, 217, 1606
BslFI GGGAC 1 cut(s) 881
BslI CCNNNNNNNGG 5 cut(s) 120, 216, 1115, 1252, 1373
BsmAI GTCTC 3 cut(s) 14, 1313, 1564
BsmFI GGGAC 1 cut(s) 881
BsmI GAATGC 2 cut(s) 957, 1507
BsnI GGCC 5 cut(s) 92, 98, 756, 920, 1244
Bso31I GGTCTC 1 cut(s) 14
BsoBI CYCGRG 1 cut(s) 1142
Bsp120I GGGCCC 1 cut(s) 1242
Bsp1286I GDGCHC 5 cut(s) 209, 339, 503, 771, 1246
Bsp1407I TGTACA 1 cut(s) 949
Bsp19I CCATGG 2 cut(s) 93, 1492
BspACI CCGC 7 cut(s) 66, 114, 194, 308, 793, 897, 1332
BspANI GGCC 5 cut(s) 92, 98, 756, 920, 1244
BspCNI CTCAG 3 cut(s) 24, 43, 1336
BspHI TCATGA 1 cut(s) 1569
BspMAI CTGCAG 1 cut(s) 1372
BspMI ACCTGC 1 cut(s) 365
BspPI GGATC 8 cut(s) 131, 139, 208, 291, 384, 548, 639, 1144
BspT107I GGYRCC 3 cut(s) 110, 131, 336
BspTNI GGTCTC 1 cut(s) 14
BsrDI GCAATG 1 cut(s) 1543
BsrGI TGTACA 1 cut(s) 949
BsrI ACTGG 5 cut(s) 270, 1028, 1194, 1274, 1448
BssECI CCNNGG 7 cut(s) 93, 331, 502, 863, 1058, 1492, 1604
BssT1I CCWWGG 4 cut(s) 93, 331, 1058, 1492
Bst2UI CCWGG 3 cut(s) 374, 504, 864
Bst4CI ACNGT 6 cut(s) 230, 430, 907, 1078, 1089, 1558
Bst6I CTCTTC 1 cut(s) 909
BstAUI TGTACA 1 cut(s) 949
BstC8I GCNNGC 1 cut(s) 1515
BstDEI CTNAG 4 cut(s) 11, 51, 723, 1344
BstDSI CCRYGG 2 cut(s) 93, 1492
BstF5I GGATG 3 cut(s) 310, 608, 634
BstHHI GCGC 2 cut(s) 1458, 1581
BstMAI GTCTC 3 cut(s) 14, 1313, 1564
BstMWI GCNNNNNNNGC 3 cut(s) 1144, 1217, 1340
BstNI CCWGG 3 cut(s) 374, 504, 864
BstNSI RCATGY 1 cut(s) 950
BstSCI CCNGG 4 cut(s) 372, 502, 862, 1604
BstSFI CTRYAG 3 cut(s) 189, 1368, 1546
BstSLI GKGCMC 2 cut(s) 339, 1246
BstV2I GAAGAC 1 cut(s) 741
BstX2I RGATCY 5 cut(s) 123, 213, 283, 376, 1149
BstYI RGATCY 5 cut(s) 123, 213, 283, 376, 1149
BsuI GTATCC 2 cut(s) 662, 1160
BsuRI GGCC 5 cut(s) 92, 98, 756, 920, 1244
BtgI CCRYGG 2 cut(s) 93, 1492
BtrI CACGTC 1 cut(s) 175
BtsCI GGATG 3 cut(s) 310, 608, 634
BtsI GCAGTG 2 cut(s) 391, 1315
BtsIMutI CAGTG 4 cut(s) 391, 903, 1315, 1455
BveI ACCTGC 1 cut(s) 365
Cac8I GCNNGC 1 cut(s) 1515
CciI TCATGA 1 cut(s) 1569
CfoI GCGC 2 cut(s) 1458, 1581
Cfr13I GGNCC 7 cut(s) 354, 868, 878, 919, 1187, 1242, 1243
Csp6I GTAC 2 cut(s) 950, 1327
CviAII CATG 7 cut(s) 21, 94, 621, 938, 947, 1493, 1570
CviQI GTAC 2 cut(s) 950, 1327
DdeI CTNAG 4 cut(s) 11, 51, 723, 1344
DrdI GACNNNNNNGTC 1 cut(s) 1194
DseDI GACNNNNNNGTC 1 cut(s) 1194
EaeI YGGCCR 3 cut(s) 90, 96, 754
Eam1104I CTCTTC 1 cut(s) 909
EarI CTCTTC 1 cut(s) 909
EciI GGCGGA 1 cut(s) 1321
Ecl136II GAGCTC 1 cut(s) 207
Eco130I CCWWGG 4 cut(s) 93, 331, 1058, 1492
Eco24I GRGCYC 3 cut(s) 209, 503, 1246
Eco31I GGTCTC 1 cut(s) 14
Eco47I GGWCC 4 cut(s) 354, 868, 878, 1187
Eco53kI GAGCTC 1 cut(s) 207
Eco57I CTGAAG 1 cut(s) 834
Eco88I CYCGRG 1 cut(s) 1142
EcoICRI GAGCTC 1 cut(s) 207
EcoO109I RGGNCCY 3 cut(s) 354, 919, 1242
EcoRII CCWGG 3 cut(s) 372, 502, 862
EcoT14I CCWWGG 4 cut(s) 93, 331, 1058, 1492
EcoT22I ATGCAT 1 cut(s) 1509
EcoT38I GRGCYC 3 cut(s) 209, 503, 1246
ErhI CCWWGG 4 cut(s) 93, 331, 1058, 1492
FaeI CATG 7 cut(s) 24, 97, 624, 941, 950, 1496, 1573
FalI AAGNNNNNCTT 2 cut(s) 519, 551
FaqI GGGAC 1 cut(s) 881
FatI CATG 7 cut(s) 20, 93, 620, 937, 946, 1492, 1569
FblI GTMKAC 1 cut(s) 157
FokI GGATG 3 cut(s) 317, 595, 621
FriOI GRGCYC 3 cut(s) 209, 503, 1246
FspBI CTAG 4 cut(s) 566, 875, 1263, 1469
GlaI GCGC 2 cut(s) 1457, 1580
GsuI CTGGAG 1 cut(s) 951
HaeIII GGCC 5 cut(s) 92, 98, 756, 920, 1244
HapII CCGG 6 cut(s) 78, 89, 108, 135, 217, 1606
HhaI GCGC 2 cut(s) 1458, 1581
Hin1II CATG 7 cut(s) 24, 97, 624, 941, 950, 1496, 1573
Hin6I GCGC 2 cut(s) 1456, 1579
HinP1I GCGC 2 cut(s) 1456, 1579
HincII GTYRAC 5 cut(s) 178, 480, 810, 993, 1092
HindII GTYRAC 5 cut(s) 178, 480, 810, 993, 1092
HindIII AAGCTT 1 cut(s) 1483
HinfI GANTC 7 cut(s) 17, 320, 516, 532, 980, 1259, 1348
HpaI GTTAAC 1 cut(s) 993
HpaII CCGG 6 cut(s) 78, 89, 108, 135, 217, 1606
HphI GGTGA 5 cut(s) 259, 446, 830, 975, 1130
Hpy166II GTNNAC 8 cut(s) 158, 178, 394, 480, 810, 993, 1092, 1414
Hpy188III TCNNGA 4 cut(s) 968, 1142, 1385, 1570
Hpy8I GTNNAC 8 cut(s) 158, 178, 394, 480, 810, 993, 1092, 1414
HpyCH4III ACNGT 6 cut(s) 230, 430, 907, 1078, 1089, 1558
HpyCH4IV ACGT 1 cut(s) 174
HpyF10VI GCNNNNNNNGC 3 cut(s) 1144, 1217, 1340
HpyF3I CTNAG 4 cut(s) 11, 51, 723, 1344
HpySE526I ACGT 1 cut(s) 174
Hsp92II CATG 7 cut(s) 24, 97, 624, 941, 950, 1496, 1573
HspAI GCGC 2 cut(s) 1456, 1579
KspAI GTTAAC 1 cut(s) 993
LmnI GCTCC 7 cut(s) 91, 212, 498, 1135, 1398, 1430, 1533
LweI GCATC 3 cut(s) 295, 511, 1494
MaeI CTAG 4 cut(s) 566, 875, 1263, 1469
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 3 cut(s) 818, 1101, 1442
MboII GAAGA 9 cut(s) 67, 427, 637, 741, 831, 926, 1190, 1513, 1585
MflI RGATCY 5 cut(s) 123, 213, 283, 376, 1149
MhlI GDGCHC 5 cut(s) 209, 339, 503, 771, 1246
MlsI TGGCCA 2 cut(s) 98, 756
MluCI AATT 9 cut(s) 102, 422, 473, 644, 1048, 1111, 1123, 1215, 1354
MluNI TGGCCA 2 cut(s) 98, 756
MlyI GAGTC 3 cut(s) 26, 1268, 1357
Mox20I TGGCCA 2 cut(s) 98, 756
Mph1103I ATGCAT 1 cut(s) 1509
MscI TGGCCA 2 cut(s) 98, 756
MseI TTAA 7 cut(s) 680, 714, 804, 992, 1047, 1157, 1236
MslI CAYNNNNRTG 1 cut(s) 774
Msp20I TGGCCA 2 cut(s) 98, 756
MspA1I CMGCKG 2 cut(s) 512, 793
MspI CCGG 6 cut(s) 78, 89, 108, 135, 217, 1606
MspR9I CCNGG 4 cut(s) 374, 504, 864, 1606
Mva1269I GAATGC 2 cut(s) 957, 1507
MvaI CCWGG 3 cut(s) 374, 504, 864
MwoI GCNNNNNNNGC 3 cut(s) 1144, 1217, 1340
NciI CCSGG 1 cut(s) 1606
NcoI CCATGG 2 cut(s) 93, 1492
NlaIII CATG 7 cut(s) 24, 97, 624, 941, 950, 1496, 1573
NmeAIII GCCGAG 1 cut(s) 226
NmuCI GTSAC 1 cut(s) 818
NsiI ATGCAT 1 cut(s) 1509
NspI RCATGY 1 cut(s) 950
OliI CACNNNNGTG 1 cut(s) 774
PagI TCATGA 1 cut(s) 1569
PciI ACATGT 1 cut(s) 946
PctI GAATGC 2 cut(s) 957, 1507
PfeI GAWTC 4 cut(s) 320, 516, 532, 980
PflMI CCANNNNNTGG 1 cut(s) 1115
PleI GAGTC 3 cut(s) 25, 1267, 1356
PpsI GAGTC 3 cut(s) 25, 1267, 1356
PpuMI RGGWCCY 1 cut(s) 354
PscI ACATGT 1 cut(s) 946
PshBI ATTAAT 1 cut(s) 1047
Psp124BI GAGCTC 1 cut(s) 209
Psp5II RGGWCCY 1 cut(s) 354
Psp6I CCWGG 3 cut(s) 372, 502, 862
PspGI CCWGG 3 cut(s) 372, 502, 862
PspOMI GGGCCC 1 cut(s) 1242
PspPI GGNCC 7 cut(s) 354, 868, 878, 919, 1187, 1242, 1243
PspPPI RGGWCCY 1 cut(s) 354
PstI CTGCAG 1 cut(s) 1372
PsuI RGATCY 5 cut(s) 123, 213, 283, 376, 1149
PvuII CAGCTG 1 cut(s) 512
RsaI GTAC 2 cut(s) 951, 1328
RsaNI GTAC 2 cut(s) 950, 1327
RseI CAYNNNNRTG 1 cut(s) 774
SacI GAGCTC 1 cut(s) 209
SaqAI TTAA 7 cut(s) 680, 714, 804, 992, 1047, 1157, 1236
Sau96I GGNCC 7 cut(s) 354, 868, 878, 919, 1187, 1242, 1243
SchI GAGTC 3 cut(s) 26, 1268, 1357
ScrFI CCNGG 4 cut(s) 374, 504, 864, 1606
SduI GDGCHC 5 cut(s) 209, 339, 503, 771, 1246
SfaNI GCATC 3 cut(s) 295, 511, 1494
SfcI CTRYAG 3 cut(s) 189, 1368, 1546
SinI GGWCC 4 cut(s) 354, 868, 878, 1187
SmiMI CAYNNNNRTG 1 cut(s) 774
SmlI CTYRAG 1 cut(s) 349
SmoI CTYRAG 1 cut(s) 349
Sse9I AATT 9 cut(s) 102, 422, 473, 644, 1048, 1111, 1123, 1215, 1354
SsiI CCGC 7 cut(s) 66, 114, 194, 308, 793, 897, 1332
SspMI CTAG 4 cut(s) 566, 875, 1263, 1469
SstI GAGCTC 1 cut(s) 209
StyD4I CCNGG 4 cut(s) 372, 502, 862, 1604
StyI CCWWGG 4 cut(s) 93, 331, 1058, 1492
TaaI ACNGT 6 cut(s) 230, 430, 907, 1078, 1089, 1558
TaiI ACGT 1 cut(s) 177
TaqI TCGA 3 cut(s) 519, 705, 1351
TasI AATT 9 cut(s) 102, 422, 473, 644, 1048, 1111, 1123, 1215, 1354
TatI WGTACW 2 cut(s) 949, 1326
TauI GCSGC 5 cut(s) 68, 116, 197, 796, 899
TfiI GAWTC 4 cut(s) 320, 516, 532, 980
Tru1I TTAA 7 cut(s) 680, 714, 804, 992, 1047, 1157, 1236
Tru9I TTAA 7 cut(s) 680, 714, 804, 992, 1047, 1157, 1236
TscAI CASTG 4 cut(s) 391, 910, 1315, 1455
TseFI GTSAC 1 cut(s) 818
Tsp45I GTSAC 1 cut(s) 818
TspDTI ATGAA 9 cut(s) 74, 575, 831, 927, 993, 1221, 1257, 1586, 1610
TspGWI ACGGA 2 cut(s) 174, 425
TspRI CASTG 4 cut(s) 391, 910, 1315, 1455
Van91I CCANNNNNTGG 1 cut(s) 1115
VpaK11BI GGWCC 4 cut(s) 354, 868, 878, 1187
VspI ATTAAT 1 cut(s) 1047
XapI RAATTY 3 cut(s) 102, 1111, 1123
XceI RCATGY 1 cut(s) 950
XcmI CCANNNNNNNNNTGG 1 cut(s) 277
XmiI GTMKAC 1 cut(s) 157
XspI CTAG 4 cut(s) 566, 875, 1263, 1469
Zsp2I ATGCAT 1 cut(s) 1509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.