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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g19064 |
| rosa_multiflora | Rmu_sc0001246.1_g000018 |
| rosa_rugosa | Rorug06G0164700 |
| rosa_samantha | Rh6AG277700 Rh6BG277900 Rh6DG272500 |
| rosa_wichuraiana | Rw6G023890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 549 |
| AclWI | GGATC | 2 cut(s) | 17, 156 |
| AcsI | RAATTY | 1 cut(s) | 581 |
| AcuI | CTGAAG | 2 cut(s) | 74, 186 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 289 |
| AflIII | ACRYGT | 1 cut(s) | 189 |
| AgsI | TTSAA | 1 cut(s) | 117 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 276, 308 |
| AluBI | AGCT | 3 cut(s) | 329, 346, 473 |
| AluI | AGCT | 3 cut(s) | 329, 346, 473 |
| Alw21I | GWGCWC | 1 cut(s) | 348 |
| Alw26I | GTCTC | 2 cut(s) | 446, 545 |
| AlwI | GGATC | 2 cut(s) | 17, 156 |
| AoxI | GGCC | 1 cut(s) | 160 |
| ApoI | RAATTY | 1 cut(s) | 581 |
| AspLEI | GCGC | 1 cut(s) | 224 |
| AspS9I | GGNCC | 2 cut(s) | 161, 568 |
| AvaII | GGWCC | 1 cut(s) | 568 |
| BanII | GRGCYC | 1 cut(s) | 348 |
| BbsI | GAAGAC | 1 cut(s) | 367 |
| Bbv12I | GWGCWC | 1 cut(s) | 348 |
| BccI | CCATC | 1 cut(s) | 499 |
| BclI | TGATCA | 2 cut(s) | 252, 310 |
| BcoDI | GTCTC | 2 cut(s) | 446, 545 |
| Bme18I | GGWCC | 1 cut(s) | 568 |
| BmgT120I | GGNCC | 2 cut(s) | 161, 568 |
| BmiI | GGNNCC | 3 cut(s) | 163, 569, 570 |
| BpiI | GAAGAC | 1 cut(s) | 367 |
| BpmI | CTGGAG | 1 cut(s) | 210 |
| BsaBI | GATNNNNATC | 1 cut(s) | 251 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 289 |
| Bse8I | GATNNNNATC | 1 cut(s) | 251 |
| BseJI | GATNNNNATC | 1 cut(s) | 251 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 289 |
| BseMII | CTCAG | 1 cut(s) | 550 |
| BshFI | GGCC | 1 cut(s) | 162 |
| BsiHKAI | GWGCWC | 1 cut(s) | 348 |
| BslFI | GGGAC | 1 cut(s) | 554 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 289 |
| BsmAI | GTCTC | 2 cut(s) | 446, 545 |
| BsmFI | GGGAC | 1 cut(s) | 554 |
| BsnI | GGCC | 1 cut(s) | 162 |
| Bsp1286I | GDGCHC | 1 cut(s) | 348 |
| Bsp143I | GATC | 4 cut(s) | 22, 148, 252, 310 |
| BspANI | GGCC | 1 cut(s) | 162 |
| BspCNI | CTCAG | 1 cut(s) | 549 |
| BspLI | GGNNCC | 3 cut(s) | 163, 569, 570 |
| BspPI | GGATC | 2 cut(s) | 17, 156 |
| BssMI | GATC | 4 cut(s) | 22, 148, 252, 310 |
| Bst4CI | ACNGT | 1 cut(s) | 373 |
| Bst6I | CTCTTC | 1 cut(s) | 444 |
| BstDEI | CTNAG | 2 cut(s) | 11, 536 |
| BstHHI | GCGC | 1 cut(s) | 224 |
| BstKTI | GATC | 4 cut(s) | 25, 151, 255, 313 |
| BstMAI | GTCTC | 2 cut(s) | 446, 545 |
| BstMBI | GATC | 4 cut(s) | 22, 148, 252, 310 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 343 |
| BstV2I | GAAGAC | 1 cut(s) | 367 |
| BstX2I | RGATCY | 1 cut(s) | 22 |
| BstYI | RGATCY | 1 cut(s) | 22 |
| BsuRI | GGCC | 1 cut(s) | 162 |
| CfoI | GCGC | 1 cut(s) | 224 |
| Cfr13I | GGNCC | 2 cut(s) | 161, 568 |
| CviAII | CATG | 3 cut(s) | 152, 272, 586 |
| CviJI | RGCY | 9 cut(s) | 162, 182, 206, 230, 308, 329, 346, 435, 473 |
| CviKI_1 | RGCY | 9 cut(s) | 162, 182, 206, 230, 308, 329, 346, 435, 473 |
| DdeI | CTNAG | 2 cut(s) | 11, 536 |
| DpnI | GATC | 4 cut(s) | 24, 150, 254, 312 |
| DpnII | GATC | 4 cut(s) | 22, 148, 252, 310 |
| Eam1104I | CTCTTC | 1 cut(s) | 444 |
| EarI | CTCTTC | 1 cut(s) | 444 |
| Ecl136II | GAGCTC | 1 cut(s) | 346 |
| Eco24I | GRGCYC | 1 cut(s) | 348 |
| Eco47I | GGWCC | 1 cut(s) | 568 |
| Eco53kI | GAGCTC | 1 cut(s) | 346 |
| Eco57I | CTGAAG | 2 cut(s) | 74, 186 |
| EcoICRI | GAGCTC | 1 cut(s) | 346 |
| EcoO109I | RGGNCCY | 2 cut(s) | 161, 568 |
| EcoRI | GAATTC | 1 cut(s) | 581 |
| EcoT38I | GRGCYC | 1 cut(s) | 348 |
| FaeI | CATG | 3 cut(s) | 155, 275, 589 |
| FaqI | GGGAC | 1 cut(s) | 554 |
| FatI | CATG | 3 cut(s) | 151, 271, 585 |
| FbaI | TGATCA | 2 cut(s) | 252, 310 |
| FblI | GTMKAC | 1 cut(s) | 549 |
| FriOI | GRGCYC | 1 cut(s) | 348 |
| GlaI | GCGC | 1 cut(s) | 223 |
| GsuI | CTGGAG | 1 cut(s) | 210 |
| HaeIII | GGCC | 1 cut(s) | 162 |
| HhaI | GCGC | 1 cut(s) | 224 |
| Hin1II | CATG | 3 cut(s) | 155, 275, 589 |
| Hin6I | GCGC | 1 cut(s) | 222 |
| HinP1I | GCGC | 1 cut(s) | 222 |
| HinfI | GANTC | 3 cut(s) | 266, 462, 523 |
| Hpy166II | GTNNAC | 1 cut(s) | 550 |
| Hpy188I | TCNGA | 4 cut(s) | 12, 46, 93, 380 |
| Hpy188III | TCNNGA | 2 cut(s) | 476, 571 |
| Hpy8I | GTNNAC | 1 cut(s) | 550 |
| HpyAV | CCTTC | 2 cut(s) | 123, 493 |
| HpyCH4III | ACNGT | 1 cut(s) | 373 |
| HpyCH4IV | ACGT | 1 cut(s) | 189 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 17 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 343 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 536 |
| HpySE526I | ACGT | 1 cut(s) | 189 |
| Hsp92II | CATG | 3 cut(s) | 155, 275, 589 |
| HspAI | GCGC | 1 cut(s) | 222 |
| KflI | GGGWCCC | 1 cut(s) | 568 |
| Ksp22I | TGATCA | 2 cut(s) | 252, 310 |
| Kzo9I | GATC | 4 cut(s) | 22, 148, 252, 310 |
| LmnI | GCTCC | 5 cut(s) | 229, 343, 351, 380, 478 |
| LpnPI | CCDG | 3 cut(s) | 240, 276, 489 |
| MaeII | ACGT | 1 cut(s) | 189 |
| MalI | GATC | 4 cut(s) | 24, 150, 254, 312 |
| MboI | GATC | 4 cut(s) | 22, 148, 252, 310 |
| MboII | GAAGA | 2 cut(s) | 367, 461 |
| MfeI | CAATTG | 2 cut(s) | 300, 511 |
| MflI | RGATCY | 1 cut(s) | 22 |
| MhlI | GDGCHC | 1 cut(s) | 348 |
| MluCI | AATT | 6 cut(s) | 69, 81, 117, 300, 511, 581 |
| MlyI | GAGTC | 1 cut(s) | 471 |
| MnlI | CCTC | 5 cut(s) | 193, 217, 268, 312, 439 |
| MseI | TTAA | 1 cut(s) | 233 |
| MunI | CAATTG | 2 cut(s) | 300, 511 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 343 |
| NdeII | GATC | 4 cut(s) | 22, 148, 252, 310 |
| NlaIII | CATG | 3 cut(s) | 155, 275, 589 |
| NlaIV | GGNNCC | 3 cut(s) | 163, 569, 570 |
| PfeI | GAWTC | 2 cut(s) | 266, 523 |
| PleI | GAGTC | 1 cut(s) | 470 |
| PpsI | GAGTC | 1 cut(s) | 470 |
| PpuMI | RGGWCCY | 1 cut(s) | 568 |
| Psp124BI | GAGCTC | 1 cut(s) | 348 |
| Psp5II | RGGWCCY | 1 cut(s) | 568 |
| PspN4I | GGNNCC | 3 cut(s) | 163, 569, 570 |
| PspPI | GGNCC | 2 cut(s) | 161, 568 |
| PspPPI | RGGWCCY | 1 cut(s) | 568 |
| PsuI | RGATCY | 1 cut(s) | 22 |
| SacI | GAGCTC | 1 cut(s) | 348 |
| SaqAI | TTAA | 1 cut(s) | 233 |
| Sau3AI | GATC | 4 cut(s) | 22, 148, 252, 310 |
| Sau96I | GGNCC | 2 cut(s) | 161, 568 |
| SchI | GAGTC | 1 cut(s) | 471 |
| SduI | GDGCHC | 1 cut(s) | 348 |
| SetI | ASST | 9 cut(s) | 41, 192, 240, 265, 331, 348, 356, 475, 483 |
| SinI | GGWCC | 1 cut(s) | 568 |
| Sse9I | AATT | 6 cut(s) | 69, 81, 117, 300, 511, 581 |
| SstI | GAGCTC | 1 cut(s) | 348 |
| TaaI | ACNGT | 1 cut(s) | 373 |
| TaiI | ACGT | 1 cut(s) | 192 |
| TaqI | TCGA | 3 cut(s) | 85, 137, 579 |
| TasI | AATT | 6 cut(s) | 69, 81, 117, 300, 511, 581 |
| TfiI | GAWTC | 2 cut(s) | 266, 523 |
| Tru1I | TTAA | 1 cut(s) | 233 |
| Tru9I | TTAA | 1 cut(s) | 233 |
| TspDTI | ATGAA | 3 cut(s) | 284, 375, 574 |
| TspGWI | ACGGA | 1 cut(s) | 191 |
| VpaK11BI | GGWCC | 1 cut(s) | 568 |
| XapI | RAATTY | 1 cut(s) | 581 |
| XmiI | GTMKAC | 1 cut(s) | 549 |