Rorug06G0164700

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0019669
Physical Location & Seq
Reverse (-)
23444423 .. 23449060
4638 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0164700.1

Sequence Viewer

Length: 2895 bp
ATGCTCAAGAAACCCCGCAATCTTGTTCTTTCTGTCTTTTTTCTGTTTCTTTCTTCATGGATTTGCTTGGCCATGGCACAAAACAAAACCACTACTATAATACCAGTGAATGTAGGTGTTGTTCTTGATATAAATCAGGACTATGGGAAGATTTGGTTGAGTTGCATCAAACTGGCGCTCTCAGACTTCTATGCATCTCATGCTCACTACAAAACAAGGCTGGTCTTGAACATTAGGGACTCCGAGAACAACGTTGTACGAGCAGCTGATGCAGCTCTAGATTTGATAAAGAATACACAAGTGGAAGCCATTTTAGGACCCGTGACATCGATGGATGCGAGCTTTGTTATTAATCTGGGCGACCAAGCTCAAGTGCCAATTATTTCATTTTCTGCATCAAGCCCATCTCTTACTTCACTCCGCAGCTCCTACTTTTTCCAAATTACACAGGTTGACTCATCCCAGGTGAATGCCATAAGTGCTATCGTTCACAATTTTGGATGGAGACAAGTTGTAGCCATCTATGTAGACACAGAATACGGGGAAGGAGTCATACCTTTTCTAACTGATGCATTGCAAGAGGTTGATGTTGGTGTCACCTATCGAAGTGCAATTTCCCCATTAGCCACCGATGATCAAATTCTTCAAGAACTATACAAGTTAATGACAATGCAAACTAGAGTCTTCATTGTGCATATGAATCCGAATCTAGGTTCTAGGCTCTTTGCCAAGGCAAAAGAGATTGGAATGATGAGTCAAGGATATGTCTGGATCATGACTAATGGGTTAGCCAATCGGTTAACATCGATGAATTCTACAGTCATAAATTCCATGCAAGGTGCACTAGGTGTGCAAACATACTTTGCTCAGACAATGGAGCTTGAAGAATTCAACTTCCGGTGGAAGCAACAATTCCTGCAAGACCATCCAACTCTCATTGATGCTGAATTGGATATCTTAGCACTATGGGCTTATGATGCAGCTTTCGCACTAGCCATGGCAATCGAAGAAGTGGGGATCACAAGTACTGTCGACTTATTCCGAAAGAAAAAATCCTCCTTCAATTTGATAGATCTTGAGAACATTGAGATTTCCAAGTATGGTACGGACCTCTGCCGAGCCCTTTCGATGACTAGATTTGAAGGCATGGCTGGAAATTTCTACATTGTTGATGGTCAACTTCAGTCATCAACCTTTCGTATAGTGAATATAAATGAGGATGGAGCAAGAGATATTGGATTTTGGACACCACAAAATGGACTCGTGAACAAATTGAATTCGGCAAACACAAGCACACTTTCAACTAATTCGAAGTCCAACCTTAAAGCTAGTGTTATATGGCCTGGAGATTCTCTCTCTTTTCCCAAGGGATGGGAGATCCCAACAAAAGGCAGAAAGTTGAGAATAGGAGTTCCTGTTAATGTCGGTGTTCCTGAGTTTGTTAAGGTCACAAAAGATCCAAGCACACATACAACTGAAGTCACAGGGTTTTCTATTGACGTCTTTAAGGCTGCAATAGAGGTATTGCCATATTCTCTTCCGTATGAGTTCATTCCCTTTGAAAATCCTACTGGCTCCATTGCCGCAACTTACAACGATTTGTGCTATCAAGTATATCTTGGGAACTTTGATGCCGTGGTGGGAGATGTAACAATCAGAGCAAATAGATCATTATACGTGGACTTTACAATGCCATACACAGAATCGGGCATAGTAATGGTTGTGCCAATCTTCGACACTTGGACCAACAATGCATGGGTATTCTTGAAACCTTTGACATGGGATCTATGGCTAACAACATCATGTTTCTTTGTTTTAATCGGTTTCGTGGTTTGGGTTCTTGAACATCGAATCAATGAAGATTTTCGTGGCCCTCCCTCACATCAAGTTGGCACTAGCGTCTGGTTCTCCTTCTCAACCATGGTGTTTTCACAAAGAGAGAGAGTGGTCAGCAACTTGGGAAGATTTGTGATGATAATATGGGTATTTGTTTTGTTAATACTGACACAAAGTTACACGGCTAGTCTAGCTTCACTATTAACAGTCCAACAACTTCAACCAACTGTTACCGATATAAAAGATCTTTTAAGGAAGGGAGAAAACGTGGGATATAGGAGTACTGCTTATACTTATGATCTATTGAAACAAGTAGGTTTTGGCGATTCCAAGCTTAAAGGCTTTACTACTGTTGAAGAAATTCAGGAAGCTCTTTCAAAAGGGAGCCCAAATGGTGGTATTTCTGCTTTTGTTGACGAAACCCCATACACGAAGCTTCTTGTAGCCAAATATTGTTTGAAATTTACCATGGTTGGACCTATCTTCAAAACTGTTGGGTTTGGCTTTGTGTTCCCAAAACGTTCCCCTCTTGTACCTGACGTATCACAAGCAGTGCTAAACGTGACCGAAGGAGAGAAGATATTGAACATTGAAAACAAATGGTTCAATAAACAAGAAAGCAATTGTCAAGACTCTAGTACCCAACCAGTTTCCAGCAACAGTCTTGGGCTTGCCAGCTTTTGGGGTTTATTCTTGATTGTGGGGCTGGCTTCCATACTCGCACTCATCATCTTTATAGTTTGCTTTCTTTACGAGCATAGAAATATGATTCCCTCTGACTCGGGTGCCTCTAGATGGAGAAGGTTGCAGATCATGTTCGAAATCTTCAATCAAAAGGACCTTGACTCTCATACTTTTAAAACAAGTCGACAACGAGATTCAGTTCAAGCCCCAGTAAGTAACACCTTCGAAGTAGTCGACTACAATTCAAACCAGACAGAGATACATTCCGTATCTTTTGAAGAACAAGAAATACCATCAACTGATCAAGACTCGATAGAAGTAGCCACTGAGGTTGCTATTACAATTCAAGAAATCCAAGCAACTACTCTTGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

964

Amino Acids

107.84

Weight (kDa)

5.22

Isoelectric Point (pI)

36.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 36 - 407 4.2e-23 Periplasmic binding protein
ANF_receptor PF01094 53 - 406 7.6e-83 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 483 - 575 3.5e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 491 - 815 7.2e-08 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 593 - 849 4.9e-41 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0019669)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g19064
rosa_multiflora Rmu_sc0001246.1_g000018
rosa_rugosa Rorug06G0164700
rosa_samantha Rh6AG277700 Rh6BG277900 Rh6DG272500
rosa_wichuraiana Rw6G023890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1503
AccB1I GGYRCC 1 cut(s) 2621
AccB7I CCANNNNNTGG 4 cut(s) 1256, 1371, 2231, 2517
AccI GTMKAC 4 cut(s) 528, 1032, 2704, 2754
AciI CCGC 3 cut(s) 16, 421, 1584
AclI AACGTT 2 cut(s) 252, 2356
AclWI GGATC 5 cut(s) 779, 1025, 1372, 1451, 1791
AcoI YGGCCR 1 cut(s) 69
AcsI RAATTY 8 cut(s) 639, 811, 826, 887, 1156, 1276, 2196, 2297
AcuI CTGAAG 2 cut(s) 1166, 1497
AcyI GRCGYC 1 cut(s) 1500
AdeI CACNNNGTG 1 cut(s) 848
AfaI GTAC 6 cut(s) 258, 1027, 1105, 2119, 2370, 2476
AfiI CCNNNNNNNGG 7 cut(s) 710, 1256, 1371, 1388, 2231, 2517, 2631
AjnI CCWGG 2 cut(s) 462, 1342
Alw21I GWGCWC 1 cut(s) 844
Alw26I GTCTC 1 cut(s) 499
Alw44I GTGCAC 1 cut(s) 840
AlwI GGATC 5 cut(s) 779, 1025, 1372, 1451, 1791
Ama87I CYCGRG 1 cut(s) 2617
AoxI GGCC 3 cut(s) 69, 1340, 1870
ApaLI GTGCAC 1 cut(s) 840
ApeKI GCWGC 5 cut(s) 263, 272, 423, 980, 1511
ApoI RAATTY 8 cut(s) 639, 811, 826, 887, 1156, 1276, 2196, 2297
AseI ATTAAT 1 cut(s) 351
Asp700I GAANNNNTTC 2 cut(s) 1863, 2196
AspLEI GCGC 1 cut(s) 178
AspS9I GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
AsuHPI GGTGA 2 cut(s) 478, 589
AsuII TTCGAA 3 cut(s) 1310, 2655, 2745
AvaI CYCGRG 1 cut(s) 2617
AvaII GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
BaeGI GKGCMC 1 cut(s) 844
BaeI ACNNNNGTAYC 2 cut(s) 2458, 2491
BalI TGGCCA 1 cut(s) 71
BanI GGYRCC 1 cut(s) 2621
BanII GRGCYC 2 cut(s) 1123, 2225
BarI GAAGNNNNNNTAC 2 cut(s) 537, 569
BauI CACGAG 1 cut(s) 1262
BbsI GAAGAC 1 cut(s) 676
Bbv12I GWGCWC 1 cut(s) 844
BbvI GCAGC 5 cut(s) 275, 284, 435, 992, 1498
BceAI ACGGC 2 cut(s) 1619, 2034
BciT130I CCWGG 2 cut(s) 464, 1344
BclI TGATCA 2 cut(s) 634, 2821
BcoDI GTCTC 1 cut(s) 499
BfmI CTRYAG 1 cut(s) 816
BfoI RGCGCY 1 cut(s) 179
BglII AGATCT 2 cut(s) 1072, 2080
BisI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
BlsI GCNGC 6 cut(s) 265, 274, 425, 982, 1513, 1585
BmcAI AGTACT 2 cut(s) 1027, 2119
Bme1390I CCNGG 2 cut(s) 464, 1344
Bme18I GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
BmeT110I CYCGRG 1 cut(s) 2617
BmgT120I GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
BmiI GGNNCC 4 cut(s) 319, 1576, 2222, 2623
BmrFI CCNGG 2 cut(s) 464, 1344
BmrI ACTGGG 1 cut(s) 2723
BmsI GCATC 9 cut(s) 174, 203, 259, 325, 404, 559, 931, 967, 1621
BmuI ACTGGG 1 cut(s) 2723
BpiI GAAGAC 1 cut(s) 676
BplI GAGNNNNNCTC 2 cut(s) 1338, 1370
BpmI CTGGAG 1 cut(s) 1365
Bpu14I TTCGAA 3 cut(s) 1310, 2655, 2745
BpuEI CTTGAG 2 cut(s) 354, 1097
Bsa29I ATCGAT 2 cut(s) 329, 806
BsaAI YACGTR 1 cut(s) 1678
BsaBI GATNNNNATC 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 1500
BsaJI CCNNGG 8 cut(s) 72, 462, 729, 996, 1365, 1635, 1920, 2304
BsaWI WCCGGW 1 cut(s) 897
BsaXI ACNNNNNCTCC 4 cut(s) 1401, 1431, 2088, 2118
Bsc4I CCNNNNNNNGG 7 cut(s) 710, 1256, 1371, 1388, 2231, 2517, 2631
Bse1I ACTGG 5 cut(s) 104, 177, 1576, 2483, 2729
Bse3DI GCAATG 2 cut(s) 572, 1578
Bse8I GATNNNNATC 1 cut(s) 132
BseBI CCWGG 2 cut(s) 464, 1344
BseCI ATCGAT 2 cut(s) 329, 806
BseDI CCNNGG 8 cut(s) 72, 462, 729, 996, 1365, 1635, 1920, 2304
BseGI GGATG 6 cut(s) 340, 458, 506, 925, 1225, 1376
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 7 cut(s) 710, 1256, 1371, 1388, 2231, 2517, 2631
BseMI GCAATG 2 cut(s) 572, 1578
BseMII CTCAG 4 cut(s) 195, 881, 1425, 2838
BseNI ACTGG 5 cut(s) 104, 177, 1576, 2483, 2729
BseSI GKGCMC 1 cut(s) 844
BseXI GCAGC 5 cut(s) 275, 284, 435, 992, 1498
BshFI GGCC 3 cut(s) 71, 1342, 1872
BshNI GGYRCC 1 cut(s) 2621
BshVI ATCGAT 2 cut(s) 329, 806
BsiHKAI GWGCWC 1 cut(s) 844
BsiHKCI CYCGRG 1 cut(s) 2617
BsiSI CCGG 1 cut(s) 898
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 7 cut(s) 710, 1256, 1371, 1388, 2231, 2517, 2631
BsmAI GTCTC 1 cut(s) 499
BsmFI GGGAC 1 cut(s) 251
BsmI GAATGC 1 cut(s) 475
BsnI GGCC 3 cut(s) 71, 1342, 1872
BsoBI CYCGRG 1 cut(s) 2617
Bsp119I TTCGAA 3 cut(s) 1310, 2655, 2745
Bsp1286I GDGCHC 3 cut(s) 844, 1123, 2225
Bsp19I CCATGG 4 cut(s) 72, 996, 1920, 2304
BspACI CCGC 3 cut(s) 16, 421, 1584
BspANI GGCC 3 cut(s) 71, 1342, 1872
BspCNI CTCAG 4 cut(s) 194, 880, 1426, 2839
BspDI ATCGAT 2 cut(s) 329, 806
BspHI TCATGA 1 cut(s) 774
BspLI GGNNCC 4 cut(s) 319, 1576, 2222, 2623
BspPI GGATC 5 cut(s) 779, 1025, 1372, 1451, 1791
BspT104I TTCGAA 3 cut(s) 1310, 2655, 2745
BspT107I GGYRCC 1 cut(s) 2621
BsrDI GCAATG 2 cut(s) 572, 1578
BsrI ACTGG 5 cut(s) 104, 177, 1576, 2483, 2729
BssECI CCNNGG 8 cut(s) 72, 462, 729, 996, 1365, 1635, 1920, 2304
BssNI GRCGYC 1 cut(s) 1500
BssSI CACGAG 1 cut(s) 1262
BssT1I CCWWGG 6 cut(s) 72, 729, 996, 1365, 1920, 2304
Bst2BI CACGAG 1 cut(s) 1262
Bst2UI CCWGG 2 cut(s) 464, 1344
Bst4CI ACNGT 7 cut(s) 820, 1030, 2044, 2065, 2188, 2329, 2498
Bst6I CTCTTC 1 cut(s) 1542
BstACI GRCGYC 1 cut(s) 1500
BstAPI GCANNNNNTGC 2 cut(s) 200, 269
BstBAI YACGTR 1 cut(s) 1678
BstBI TTCGAA 3 cut(s) 1310, 2655, 2745
BstC8I GCNNGC 4 cut(s) 340, 2508, 2512, 2544
BstDEI CTNAG 5 cut(s) 181, 867, 958, 1434, 2847
BstDSI CCRYGG 5 cut(s) 72, 996, 1635, 1920, 2304
BstF5I GGATG 6 cut(s) 340, 458, 506, 925, 1225, 1376
BstH2I RGCGCY 1 cut(s) 179
BstHHI GCGC 1 cut(s) 178
BstMAI GTCTC 1 cut(s) 499
BstMWI GCNNNNNNNGC 8 cut(s) 200, 269, 272, 479, 968, 977, 986, 2027
BstNI CCWGG 2 cut(s) 464, 1344
BstSCI CCNGG 2 cut(s) 462, 1342
BstSFI CTRYAG 1 cut(s) 816
BstSLI GKGCMC 1 cut(s) 844
BstV1I GCAGC 5 cut(s) 275, 284, 435, 992, 1498
BstV2I GAAGAC 1 cut(s) 676
BstX2I RGATCY 5 cut(s) 1072, 1377, 1456, 1783, 2080
BstYI RGATCY 5 cut(s) 1072, 1377, 1456, 1783, 2080
Bsu15I ATCGAT 2 cut(s) 329, 806
BsuRI GGCC 3 cut(s) 71, 1342, 1872
BsuTUI ATCGAT 2 cut(s) 329, 806
BtgI CCRYGG 5 cut(s) 72, 996, 1635, 1920, 2304
BtsCI GGATG 6 cut(s) 340, 458, 506, 925, 1225, 1376
BtsI GCAGTG 1 cut(s) 2394
BtsIMutI CAGTG 3 cut(s) 111, 2394, 2844
Cac8I GCNNGC 4 cut(s) 340, 2508, 2512, 2544
CciI TCATGA 1 cut(s) 774
CfoI GCGC 1 cut(s) 178
Cfr13I GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
ClaI ATCGAT 2 cut(s) 329, 806
CseI GACGC 1 cut(s) 1888
Csp6I GTAC 6 cut(s) 257, 1026, 1104, 2118, 2369, 2475
CspCI CAANNNNNGTGG 2 cut(s) 2833, 2868
CviQI GTAC 6 cut(s) 257, 1026, 1104, 2118, 2369, 2475
DdeI CTNAG 5 cut(s) 181, 867, 958, 1434, 2847
DraI TTTAAA 1 cut(s) 2695
DraIII CACNNNGTG 1 cut(s) 848
EaeI YGGCCR 1 cut(s) 69
Eam1104I CTCTTC 1 cut(s) 1542
EarI CTCTTC 1 cut(s) 1542
Eco130I CCWWGG 6 cut(s) 72, 729, 996, 1365, 1920, 2304
Eco24I GRGCYC 2 cut(s) 1123, 2225
Eco32I GATATC 1 cut(s) 955
Eco47I GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
Eco57I CTGAAG 2 cut(s) 1166, 1497
Eco88I CYCGRG 1 cut(s) 2617
EcoO109I RGGNCCY 2 cut(s) 317, 2674
EcoRI GAATTC 3 cut(s) 811, 887, 1276
EcoRII CCWGG 2 cut(s) 462, 1342
EcoRV GATATC 1 cut(s) 955
EcoT14I CCWWGG 6 cut(s) 72, 729, 996, 1365, 1920, 2304
EcoT22I ATGCAT 3 cut(s) 196, 574, 1756
EcoT38I GRGCYC 2 cut(s) 1123, 2225
ErhI CCWWGG 6 cut(s) 72, 729, 996, 1365, 1920, 2304
FalI AAGNNNNNCTT 2 cut(s) 1602, 1634
FaqI GGGAC 1 cut(s) 251
FauI CCCGC 1 cut(s) 23
FauNDI CATATG 1 cut(s) 696
FbaI TGATCA 2 cut(s) 634, 2821
FblI GTMKAC 4 cut(s) 528, 1032, 2704, 2754
Fnu4HI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
FokI GGATG 6 cut(s) 347, 445, 513, 912, 1232, 1383
FriOI GRGCYC 2 cut(s) 1123, 2225
Fsp4HI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
GlaI GCGC 1 cut(s) 177
GluI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
GsuI CTGGAG 1 cut(s) 1365
HaeII RGCGCY 1 cut(s) 179
HaeIII GGCC 3 cut(s) 71, 1342, 1872
HapII CCGG 1 cut(s) 898
HgaI GACGC 1 cut(s) 1888
HhaI GCGC 1 cut(s) 178
Hin1I GRCGYC 1 cut(s) 1500
Hin6I GCGC 1 cut(s) 176
HinP1I GCGC 1 cut(s) 176
HincII GTYRAC 7 cut(s) 454, 801, 1033, 1178, 2251, 2705, 2755
HindII GTYRAC 7 cut(s) 454, 801, 1033, 1178, 2251, 2705, 2755
HindIII AAGCTT 2 cut(s) 2168, 2270
HpaI GTTAAC 1 cut(s) 801
HpaII CCGG 1 cut(s) 898
HphI GGTGA 2 cut(s) 478, 589
Hpy188I TCNGA 7 cut(s) 184, 244, 705, 870, 1043, 1658, 2614
HpyAV CCTTC 8 cut(s) 539, 1069, 1136, 1921, 2086, 2399, 2631, 2752
HpyCH4III ACNGT 7 cut(s) 820, 1030, 2044, 2065, 2188, 2329, 2498
HpyCH4IV ACGT 7 cut(s) 252, 1500, 1677, 2103, 2356, 2376, 2397
HpyF10VI GCNNNNNNNGC 8 cut(s) 200, 269, 272, 479, 968, 977, 986, 2027
HpyF3I CTNAG 5 cut(s) 181, 867, 958, 1434, 2847
HpySE526I ACGT 7 cut(s) 252, 1500, 1677, 2103, 2356, 2376, 2397
Hsp92I GRCGYC 1 cut(s) 1500
HspAI GCGC 1 cut(s) 176
Ksp22I TGATCA 2 cut(s) 634, 2821
KspAI GTTAAC 1 cut(s) 801
LmnI GCTCC 5 cut(s) 431, 877, 1223, 1580, 2220
Lsp1109I GCAGC 5 cut(s) 275, 284, 435, 992, 1498
LweI GCATC 9 cut(s) 174, 203, 259, 325, 404, 559, 931, 967, 1621
MaeII ACGT 7 cut(s) 252, 1500, 1677, 2103, 2356, 2376, 2397
MaeIII GTNAC 9 cut(s) 322, 595, 1447, 1480, 1648, 2012, 2065, 2398, 2735
MfeI CAATTG 1 cut(s) 2458
MflI RGATCY 5 cut(s) 1072, 1377, 1456, 1783, 2080
MhlI GDGCHC 3 cut(s) 844, 1123, 2225
MlsI TGGCCA 1 cut(s) 71
MluNI TGGCCA 1 cut(s) 71
MmeI TCCRAC 4 cut(s) 953, 1341, 2071, 2290
Mox20I TGGCCA 1 cut(s) 71
Mph1103I ATGCAT 3 cut(s) 196, 574, 1756
MroXI GAANNNNTTC 2 cut(s) 1863, 2196
MscI TGGCCA 1 cut(s) 71
MslI CAYNNNNRTG 1 cut(s) 1715
Msp20I TGGCCA 1 cut(s) 71
MspA1I CMGCKG 1 cut(s) 266
MspI CCGG 1 cut(s) 898
MspR9I CCNGG 2 cut(s) 464, 1344
MunI CAATTG 1 cut(s) 2458
Mva1269I GAATGC 1 cut(s) 475
MvaI CCWGG 2 cut(s) 464, 1344
MwoI GCNNNNNNNGC 8 cut(s) 200, 269, 272, 479, 968, 977, 986, 2027
NcoI CCATGG 4 cut(s) 72, 996, 1920, 2304
NdeI CATATG 1 cut(s) 696
NlaIV GGNNCC 4 cut(s) 319, 1576, 2222, 2623
NmeAIII GCCGAG 1 cut(s) 1142
NmuCI GTSAC 5 cut(s) 322, 595, 1447, 1480, 2398
NsiI ATGCAT 3 cut(s) 196, 574, 1756
NspV TTCGAA 3 cut(s) 1310, 2655, 2745
PagI TCATGA 1 cut(s) 774
PcsI WCGNNNNNNNCGW 2 cut(s) 335, 2751
PctI GAATGC 1 cut(s) 475
PdmI GAANNNNTTC 2 cut(s) 1863, 2196
PfeI GAWTC 8 cut(s) 700, 706, 1349, 1703, 1851, 2162, 2605, 2714
PflMI CCANNNNNTGG 4 cut(s) 1256, 1371, 2231, 2517
PkrI GCNGC 6 cut(s) 265, 274, 425, 982, 1513, 1585
Ppu21I YACGTR 1 cut(s) 1678
PpuMI RGGWCCY 2 cut(s) 317, 2674
PshBI ATTAAT 1 cut(s) 351
Psp1406I AACGTT 2 cut(s) 252, 2356
Psp5II RGGWCCY 2 cut(s) 317, 2674
Psp6I CCWGG 2 cut(s) 462, 1342
PspGI CCWGG 2 cut(s) 462, 1342
PspN4I GGNNCC 4 cut(s) 319, 1576, 2222, 2623
PspPI GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
PspPPI RGGWCCY 2 cut(s) 317, 2674
PsrI GAACNNNNNNTAC 4 cut(s) 105, 137, 2793, 2825
PsuI RGATCY 5 cut(s) 1072, 1377, 1456, 1783, 2080
PvuII CAGCTG 1 cut(s) 266
RsaI GTAC 6 cut(s) 258, 1027, 1105, 2119, 2370, 2476
RsaNI GTAC 6 cut(s) 257, 1026, 1104, 2118, 2369, 2475
RseI CAYNNNNRTG 1 cut(s) 1715
SalI GTCGAC 3 cut(s) 1031, 2703, 2753
SatI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
Sau96I GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
ScaI AGTACT 2 cut(s) 1027, 2119
ScrFI CCNGG 2 cut(s) 464, 1344
SduI GDGCHC 3 cut(s) 844, 1123, 2225
SfaNI GCATC 9 cut(s) 174, 203, 259, 325, 404, 559, 931, 967, 1621
SfcI CTRYAG 1 cut(s) 816
SfuI TTCGAA 3 cut(s) 1310, 2655, 2745
SinI GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
SmiMI CAYNNNNRTG 1 cut(s) 1715
SmlI CTYRAG 3 cut(s) 5, 369, 1076
SmoI CTYRAG 3 cut(s) 5, 369, 1076
SsiI CCGC 3 cut(s) 16, 421, 1584
SspI AATATT 1 cut(s) 2288
StyD4I CCNGG 2 cut(s) 462, 1342
StyI CCWWGG 6 cut(s) 72, 729, 996, 1365, 1920, 2304
TaaI ACNGT 7 cut(s) 820, 1030, 2044, 2065, 2188, 2329, 2498
TaiI ACGT 7 cut(s) 255, 1503, 1680, 2106, 2359, 2379, 2400
TaqII GACCGA 1 cut(s) 2417
TatI WGTACW 2 cut(s) 1025, 2117
TauI GCSGC 1 cut(s) 1586
TfiI GAWTC 8 cut(s) 700, 706, 1349, 1703, 1851, 2162, 2605, 2714
TscAI CASTG 3 cut(s) 111, 2394, 2851
TseFI GTSAC 5 cut(s) 322, 595, 1447, 1480, 2398
TseI GCWGC 5 cut(s) 263, 272, 423, 980, 1511
Tsp45I GTSAC 5 cut(s) 322, 595, 1447, 1480, 2398
TspDTI ATGAA 7 cut(s) 45, 375, 676, 713, 824, 1540, 1872
TspGWI ACGGA 3 cut(s) 1121, 1530, 2776
TspRI CASTG 3 cut(s) 111, 2394, 2851
Van91I CCANNNNNTGG 4 cut(s) 1256, 1371, 2231, 2517
VneI GTGCAC 1 cut(s) 840
VpaK11BI GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
VspI ATTAAT 1 cut(s) 351
XapI RAATTY 8 cut(s) 639, 811, 826, 887, 1156, 1276, 2196, 2297
XbaI TCTAGA 2 cut(s) 277, 2627
XmiI GTMKAC 4 cut(s) 528, 1032, 2704, 2754
XmnI GAANNNNTTC 2 cut(s) 1863, 2196
ZraI GACGTC 1 cut(s) 1501
ZrmI AGTACT 2 cut(s) 1027, 2119
Zsp2I ATGCAT 3 cut(s) 196, 574, 1756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.