FvH4_2g25790

Blue-light photoreceptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0014144
Physical Location & Seq
Reverse (-)
20822786 .. 20825729
2944 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g25790.t1

Sequence Viewer

Length: 1383 bp
ATGGACCACCCCAATTCCCAAATCTCAGAGAACCCAGAATCACCAGAGGAGCAACAGCAACAGCAACAAAACCCACTAGCACTCATCCATTCTTCTTCTTCCCCATTTGCCACTGCCTCACTCTCACTCTCCCTGGCCTCAATCCTCCCCATCCACTTCTTCCAACAACCCAAAGTCTCCACCCTCTTCTCCTCCTCCCACCAACCCACCAAGGCCAAAATCCCAACCCAAGCCTCCTCCCTCTCCCACCTCTCCCTCTCCGCCACCGCCCCCGCCCCCTCCAAGCTTTCCTTCAACTCCACCATCTCAGCCAACCCCCTCCAAAGCCCCCTCACTCTCGGCCCCCGCCGCCCCCTCGACCCCAACAACGGCGCCGGTCTCCGTCGAGCATCCATCGTTTGGTTCCGCAACGACCTCCGTGTCCAAGACAATGAATGCCTCAACTCCGCCCACAACGAGTCCATGTCCGTCCTGCCTGTTTTCTGCTTCGACCCGCGAGATTTCGGGAAGTCATCTTCCGGGTTCGACAAGACCGGCCCTTACCGGGCCCAGTTCCTCGTCGAGTCCGTCTCCGATTTGAGAAAGAATCTCCAGGCCAGAGGCTCCGATCTGGTTGTCAGAATCGGGAAGCCCGAGACGGTCCTGGCTGAGCTGGCCAAGGCTATTGGAGCTGACGCAATATACGCCCACAGGGAGGTGAGTCATGATGAGGTCAAGTCGGAGGAGAGGATTGAGTCTGCGATGAAGGAGGAGAATGTGGAGGTTAAGTACTTCTGGGGAAGCACTTTGTATCATATGGACGACTTGCCATTTAAGCTGGAGGATATGCCCACGAACTATGGAGGGTTTAGGGAGAAGGTGAAGGGGTTGGAGGTGAGGAAGACCATTGAGGCTTTGGAGCAGATGAAGGGCTTGCCGTCTCGAGGCGATGTTGAGCCTGGAGATGTTCCTTCCTTGATGGACTTGGGTCTCAACCCCTCTGCTTCCATGGCTCAGGATGGGAAGCCTTCTATGGTGGGAGGAGAAGCTGAAGCCCTAGAGAAGCTTAAGAAGTTTGCAGCTGAGTGCCAAGCACAACCTCCCAAGGGGAGCAAAGAAGGAAGTCAGGATAGCATCTATGGTGCAAATTTTTCATGCAAAATCTCACCATGGCTGGCCATGGGTTGCCTCTCTCCCCGCAGTATGTTTGATGAGCTAAAGAAAACTGCTAGCAGATCTGTCTCTGCATCCTCAAACCCGGACGATGGTGGCAGTGGAACAAACTGGTTAATGTTTGAGTTAATGTGGAGGGATTTCTTCAGATTTGTCACCAAGAAATACAGTGCTGGAAAGAAACAGCTTGATGCTGCTCCAGCAACAGCATGCACGGGTGCACTTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_photolyase

Protein Analysis

461

Amino Acids

50.16

Weight (kDa)

6.19

Isoelectric Point (pI)

52.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 131 - 289 1.6e-43 DNA photolyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014144)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G47590
fragaria_vesca FvH4_2g25790
malus_domestica MD03G1288700.v1.1 MD11G1309400.v1.1
prunus_persica Prupe.8G262000_v2.0.a1 Prupe.8G262000_v2.0.a1 Prupe.8G262000_v2.0.a1
pyrus_communis pycom03g22880 pycom11g27050
rosa_chinensis RchiOBHm_Chr6g0294101
rosa_laevigata RLG00000011899
rosa_multiflora Rmu_sc0005037.1_g000012
rosa_roxburghii Rroxscaffold_7G00173650
rosa_rugosa Rorug06G0241100
rosa_samantha Rh6BG360700 Rh6DG354600
rosa_wichuraiana Rw6G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 419
AccB1I GGYRCC 1 cut(s) 371
AccB7I CCANNNNNTGG 1 cut(s) 399
AccII CGCG 1 cut(s) 496
AciI CCGC 9 cut(s) 261, 267, 273, 346, 349, 406, 447, 494, 1177
AcoI YGGCCR 2 cut(s) 654, 1155
AcsI RAATTY 1 cut(s) 1126
AcuI CTGAAG 2 cut(s) 1050, 1282
AcyI GRCGYC 1 cut(s) 372
AfaI GTAC 1 cut(s) 770
AfiI CCNNNNNNNGG 7 cut(s) 368, 399, 544, 694, 923, 1085, 1244
AflII CTTAAG 1 cut(s) 1046
AgsI TTSAA 1 cut(s) 295
AjnI CCWGG 4 cut(s) 132, 591, 642, 937
AjuI GAANNNNNNNTTGG 2 cut(s) 275, 307
AluBI AGCT 9 cut(s) 286, 652, 671, 817, 1028, 1045, 1061, 1195, 1339
AluI AGCT 9 cut(s) 286, 652, 671, 817, 1028, 1045, 1061, 1195, 1339
Alw21I GWGCWC 1 cut(s) 1375
Alw26I GTCTC 7 cut(s) 181, 383, 574, 629, 924, 974, 1225
Alw44I GTGCAC 1 cut(s) 1371
Ama87I CYCGRG 2 cut(s) 632, 921
AoxI GGCC 8 cut(s) 135, 213, 340, 535, 546, 594, 654, 1155
ApaI GGGCCC 1 cut(s) 550
ApaLI GTGCAC 1 cut(s) 1371
ApeKI GCWGC 2 cut(s) 1058, 1346
ApoI RAATTY 1 cut(s) 1126
AspLEI GCGC 1 cut(s) 374
AspS9I GGNCC 6 cut(s) 4, 341, 536, 546, 547, 640
AsuC2I CCSGG 3 cut(s) 520, 545, 1238
AsuHPI GGTGA 6 cut(s) 33, 709, 871, 886, 1137, 1300
AsuNHI GCTAGC 1 cut(s) 1208
AvaI CYCGRG 2 cut(s) 632, 921
AvaII GGWCC 2 cut(s) 4, 640
BaeGI GKGCMC 2 cut(s) 550, 1375
BalI TGGCCA 2 cut(s) 656, 1157
BanI GGYRCC 1 cut(s) 371
BanII GRGCYC 1 cut(s) 550
BbsI GAAGAC 1 cut(s) 887
Bbv12I GWGCWC 1 cut(s) 1375
BbvI GCAGC 2 cut(s) 1070, 1333
BccI CCATC 6 cut(s) 158, 311, 401, 952, 992, 1238
BceAI ACGGC 2 cut(s) 385, 901
BciT130I CCWGG 4 cut(s) 134, 593, 644, 939
BcnI CCSGG 3 cut(s) 520, 545, 1238
BcoDI GTCTC 7 cut(s) 181, 383, 574, 629, 924, 974, 1225
BfaI CTAG 3 cut(s) 77, 1037, 1209
BfoI RGCGCY 1 cut(s) 375
BfrI CTTAAG 1 cut(s) 1046
BglII AGATCT 1 cut(s) 1214
BisI GCNGC 3 cut(s) 349, 1059, 1347
BlpI GCTNAGC 1 cut(s) 648
BlsI GCNGC 3 cut(s) 350, 1060, 1348
BmcAI AGTACT 1 cut(s) 770
Bme1390I CCNGG 7 cut(s) 134, 520, 545, 593, 644, 939, 1238
Bme18I GGWCC 2 cut(s) 4, 640
BmeT110I CYCGRG 2 cut(s) 632, 921
BmgT120I GGNCC 6 cut(s) 4, 341, 536, 546, 547, 640
BmiI GGNNCC 5 cut(s) 343, 373, 404, 548, 604
BmrFI CCNGG 7 cut(s) 134, 520, 545, 593, 644, 939, 1238
BmrI ACTGGG 1 cut(s) 544
BmsI GCATC 4 cut(s) 398, 1122, 1235, 1333
BmtI GCTAGC 1 cut(s) 1212
BmuI ACTGGG 1 cut(s) 544
BoxI GACNNNNGTC 1 cut(s) 966
BpiI GAAGAC 1 cut(s) 887
BplI GAGNNNNNCTC 2 cut(s) 554, 586
BpmI CTGGAG 4 cut(s) 575, 839, 960, 1335
Bpu10I CCTNAGC 1 cut(s) 993
Bpu1102I GCTNAGC 1 cut(s) 648
BpuMI CCSGG 3 cut(s) 520, 545, 1238
BsaHI GRCGYC 1 cut(s) 372
BsaI GGTCTC 2 cut(s) 383, 974
BsaJI CCNNGG 7 cut(s) 132, 210, 657, 987, 1083, 1148, 1158
BsaXI ACNNNNNCTCC 2 cut(s) 752, 782
Bsc4I CCNNNNNNNGG 7 cut(s) 368, 399, 544, 694, 923, 1085, 1244
Bse118I RCCGGY 2 cut(s) 374, 533
Bse1I ACTGG 2 cut(s) 550, 1268
BseBI CCWGG 4 cut(s) 134, 593, 644, 939
BseDI CCNNGG 7 cut(s) 132, 210, 657, 987, 1083, 1148, 1158
BseGI GGATG 5 cut(s) 84, 150, 389, 1003, 1226
BseLI CCNNNNNNNGG 7 cut(s) 368, 399, 544, 694, 923, 1085, 1244
BseMII CTCAG 5 cut(s) 39, 321, 639, 1007, 1053
BseNI ACTGG 2 cut(s) 550, 1268
BseRI GAGGAG 7 cut(s) 62, 181, 184, 226, 737, 764, 1035
BseSI GKGCMC 2 cut(s) 550, 1375
BseXI GCAGC 2 cut(s) 1070, 1333
Bsh1236I CGCG 1 cut(s) 496
BshFI GGCC 8 cut(s) 137, 215, 342, 537, 548, 596, 656, 1157
BshNI GGYRCC 1 cut(s) 371
BsiHKAI GWGCWC 1 cut(s) 1375
BsiHKCI CYCGRG 2 cut(s) 632, 921
BsiSI CCGG 5 cut(s) 375, 519, 534, 544, 1238
BslI CCNNNNNNNGG 7 cut(s) 368, 399, 544, 694, 923, 1085, 1244
BsmAI GTCTC 7 cut(s) 181, 383, 574, 629, 924, 974, 1225
BsmBI CGTCTC 3 cut(s) 574, 629, 924
BsmI GAATGC 1 cut(s) 440
BsnI GGCC 8 cut(s) 137, 215, 342, 537, 548, 596, 656, 1157
Bso31I GGTCTC 2 cut(s) 383, 974
BsoBI CYCGRG 2 cut(s) 632, 921
Bsp120I GGGCCC 1 cut(s) 546
Bsp1286I GDGCHC 2 cut(s) 550, 1375
Bsp143I GATC 2 cut(s) 607, 1214
Bsp1720I GCTNAGC 1 cut(s) 648
Bsp19I CCATGG 3 cut(s) 987, 1148, 1158
BspACI CCGC 9 cut(s) 261, 267, 273, 346, 349, 406, 447, 494, 1177
BspANI GGCC 8 cut(s) 137, 215, 342, 537, 548, 596, 656, 1157
BspCNI CTCAG 5 cut(s) 38, 320, 640, 1006, 1054
BspFNI CGCG 1 cut(s) 496
BspHI TCATGA 1 cut(s) 703
BspLI GGNNCC 5 cut(s) 343, 373, 404, 548, 604
BspOI GCTAGC 1 cut(s) 1212
BspT107I GGYRCC 1 cut(s) 371
BspTI CTTAAG 1 cut(s) 1046
BspTNI GGTCTC 2 cut(s) 383, 974
BsrFI RCCGGY 2 cut(s) 374, 533
BsrI ACTGG 2 cut(s) 550, 1268
BssAI RCCGGY 2 cut(s) 374, 533
BssECI CCNNGG 7 cut(s) 132, 210, 657, 987, 1083, 1148, 1158
BssMI GATC 2 cut(s) 607, 1214
BssNI GRCGYC 1 cut(s) 372
BssT1I CCWWGG 6 cut(s) 210, 657, 987, 1083, 1148, 1158
Bst2UI CCWGG 4 cut(s) 134, 593, 644, 939
Bst4CI ACNGT 2 cut(s) 640, 1322
Bst6I CTCTTC 1 cut(s) 191
BstACI GRCGYC 1 cut(s) 372
BstAFI CTTAAG 1 cut(s) 1046
BstC8I GCNNGC 5 cut(s) 654, 914, 1155, 1210, 1363
BstDEI CTNAG 5 cut(s) 25, 307, 648, 993, 1062
BstDSI CCRYGG 3 cut(s) 987, 1148, 1158
BstF5I GGATG 5 cut(s) 84, 150, 389, 1003, 1226
BstFNI CGCG 1 cut(s) 496
BstH2I RGCGCY 1 cut(s) 375
BstHHI GCGC 1 cut(s) 374
BstKTI GATC 2 cut(s) 610, 1217
BstMAI GTCTC 7 cut(s) 181, 383, 574, 629, 924, 974, 1225
BstMBI GATC 2 cut(s) 607, 1214
BstMWI GCNNNNNNNGC 7 cut(s) 348, 653, 668, 683, 814, 989, 1352
BstNI CCWGG 4 cut(s) 134, 593, 644, 939
BstNSI RCATGY 1 cut(s) 1365
BstPAI GACNNNNGTC 1 cut(s) 966
BstSCI CCNGG 7 cut(s) 132, 518, 543, 591, 642, 937, 1236
BstSLI GKGCMC 2 cut(s) 550, 1375
BstUI CGCG 1 cut(s) 496
BstV1I GCAGC 2 cut(s) 1070, 1333
BstV2I GAAGAC 1 cut(s) 887
BstX2I RGATCY 1 cut(s) 1214
BstYI RGATCY 1 cut(s) 1214
BsuRI GGCC 8 cut(s) 137, 215, 342, 537, 548, 596, 656, 1157
BtgI CCRYGG 3 cut(s) 987, 1148, 1158
BtgZI GCGATG 2 cut(s) 755, 942
BtsCI GGATG 5 cut(s) 84, 150, 389, 1003, 1226
BtsI GCAGTG 2 cut(s) 111, 1258
BtsIMutI CAGTG 3 cut(s) 111, 1258, 1327
Cac8I GCNNGC 5 cut(s) 654, 914, 1155, 1210, 1363
CciI TCATGA 1 cut(s) 703
CfoI GCGC 1 cut(s) 374
Cfr10I RCCGGY 2 cut(s) 374, 533
Cfr13I GGNCC 6 cut(s) 4, 341, 536, 546, 547, 640
CseI GACGC 1 cut(s) 683
Csp6I GTAC 1 cut(s) 769
CviAII CATG 7 cut(s) 463, 704, 988, 1134, 1149, 1159, 1362
CviQI GTAC 1 cut(s) 769
DdeI CTNAG 5 cut(s) 25, 307, 648, 993, 1062
DinI GGCGCC 1 cut(s) 373
DpnI GATC 2 cut(s) 609, 1216
DpnII GATC 2 cut(s) 607, 1214
DrdI GACNNNNNNGTC 1 cut(s) 419
DseDI GACNNNNNNGTC 1 cut(s) 419
EaeI YGGCCR 2 cut(s) 654, 1155
Eam1104I CTCTTC 1 cut(s) 191
EarI CTCTTC 1 cut(s) 191
EciI GGCGGA 2 cut(s) 250, 436
Eco130I CCWWGG 6 cut(s) 210, 657, 987, 1083, 1148, 1158
Eco24I GRGCYC 1 cut(s) 550
Eco31I GGTCTC 2 cut(s) 383, 974
Eco47I GGWCC 2 cut(s) 4, 640
Eco57I CTGAAG 2 cut(s) 1050, 1282
Eco88I CYCGRG 2 cut(s) 632, 921
EcoRII CCWGG 4 cut(s) 132, 591, 642, 937
EcoT14I CCWWGG 6 cut(s) 210, 657, 987, 1083, 1148, 1158
EcoT38I GRGCYC 1 cut(s) 550
EgeI GGCGCC 1 cut(s) 373
EheI GGCGCC 1 cut(s) 373
ErhI CCWWGG 6 cut(s) 210, 657, 987, 1083, 1148, 1158
Esp3I CGTCTC 3 cut(s) 574, 629, 924
FaeI CATG 7 cut(s) 466, 707, 991, 1137, 1152, 1162, 1365
FalI AAGNNNNNCTT 2 cut(s) 275, 307
FatI CATG 7 cut(s) 462, 703, 987, 1133, 1148, 1158, 1361
FauI CCCGC 4 cut(s) 280, 353, 501, 1184
FauNDI CATATG 1 cut(s) 795
Fnu4HI GCNGC 3 cut(s) 349, 1059, 1347
FokI GGATG 5 cut(s) 71, 137, 376, 1010, 1213
FriOI GRGCYC 1 cut(s) 550
Fsp4HI GCNGC 3 cut(s) 349, 1059, 1347
FspBI CTAG 3 cut(s) 77, 1037, 1209
GlaI GCGC 1 cut(s) 373
GluI GCNGC 3 cut(s) 349, 1059, 1347
GsuI CTGGAG 4 cut(s) 575, 839, 960, 1335
HaeII RGCGCY 1 cut(s) 375
HaeIII GGCC 8 cut(s) 137, 215, 342, 537, 548, 596, 656, 1157
HapII CCGG 5 cut(s) 375, 519, 534, 544, 1238
HgaI GACGC 1 cut(s) 683
HhaI GCGC 1 cut(s) 374
Hin1I GRCGYC 1 cut(s) 372
Hin1II CATG 7 cut(s) 466, 707, 991, 1137, 1152, 1162, 1365
Hin6I GCGC 1 cut(s) 372
HinP1I GCGC 1 cut(s) 372
HindIII AAGCTT 2 cut(s) 284, 1043
HinfI GANTC 7 cut(s) 38, 458, 563, 586, 621, 700, 734
HpaII CCGG 5 cut(s) 375, 519, 534, 544, 1238
HphI GGTGA 6 cut(s) 33, 709, 871, 886, 1137, 1300
Hpy166II GTNNAC 1 cut(s) 1373
Hpy188I TCNGA 6 cut(s) 28, 574, 607, 620, 721, 1301
Hpy188III TCNNGA 6 cut(s) 505, 625, 704, 921, 995, 1106
Hpy8I GTNNAC 1 cut(s) 1373
Hpy99I CGWCG 2 cut(s) 387, 563
HpyAV CCTTC 8 cut(s) 301, 739, 850, 856, 901, 960, 1017, 1091
HpyCH4III ACNGT 2 cut(s) 640, 1322
HpyCH4V TGCA 6 cut(s) 1058, 1124, 1137, 1226, 1365, 1373
HpyF10VI GCNNNNNNNGC 7 cut(s) 348, 653, 668, 683, 814, 989, 1352
HpyF3I CTNAG 5 cut(s) 25, 307, 648, 993, 1062
Hsp92I GRCGYC 1 cut(s) 372
Hsp92II CATG 7 cut(s) 466, 707, 991, 1137, 1152, 1162, 1365
HspAI GCGC 1 cut(s) 372
KasI GGCGCC 1 cut(s) 371
Kzo9I GATC 2 cut(s) 607, 1214
LmnI GCTCC 6 cut(s) 49, 608, 668, 898, 1089, 1354
Lsp1109I GCAGC 2 cut(s) 1070, 1333
LweI GCATC 4 cut(s) 398, 1122, 1235, 1333
MaeI CTAG 3 cut(s) 77, 1037, 1209
MaeIII GTNAC 1 cut(s) 1306
MalI GATC 2 cut(s) 609, 1216
MboI GATC 2 cut(s) 607, 1214
MboII GAAGA 8 cut(s) 84, 87, 90, 151, 178, 507, 892, 1288
MflI RGATCY 1 cut(s) 1214
MhlI GDGCHC 2 cut(s) 550, 1375
MlsI TGGCCA 2 cut(s) 656, 1157
MluCI AATT 2 cut(s) 13, 1126
MluNI TGGCCA 2 cut(s) 656, 1157
Mly113I GGCGCC 1 cut(s) 372
MlyI GAGTC 4 cut(s) 467, 572, 709, 743
MmeI TCCRAC 3 cut(s) 187, 699, 849
Mox20I TGGCCA 2 cut(s) 656, 1157
MscI TGGCCA 2 cut(s) 656, 1157
MseI TTAA 5 cut(s) 765, 813, 1047, 1268, 1280
Msp20I TGGCCA 2 cut(s) 656, 1157
MspA1I CMGCKG 1 cut(s) 1061
MspCI CTTAAG 1 cut(s) 1046
MspI CCGG 5 cut(s) 375, 519, 534, 544, 1238
MspR9I CCNGG 7 cut(s) 134, 520, 545, 593, 644, 939, 1238
Mva1269I GAATGC 1 cut(s) 440
MvaI CCWGG 4 cut(s) 134, 593, 644, 939
MvnI CGCG 1 cut(s) 496
MwoI GCNNNNNNNGC 7 cut(s) 348, 653, 668, 683, 814, 989, 1352
NarI GGCGCC 1 cut(s) 372
NciI CCSGG 3 cut(s) 520, 545, 1238
NcoI CCATGG 3 cut(s) 987, 1148, 1158
NdeI CATATG 1 cut(s) 795
NdeII GATC 2 cut(s) 607, 1214
NheI GCTAGC 1 cut(s) 1208
NlaIII CATG 7 cut(s) 466, 707, 991, 1137, 1152, 1162, 1365
NlaIV GGNNCC 5 cut(s) 343, 373, 404, 548, 604
NmeAIII GCCGAG 1 cut(s) 318
NmuCI GTSAC 1 cut(s) 1306
NspI RCATGY 1 cut(s) 1365
PaeI GCATGC 1 cut(s) 1365
PaeR7I CTCGAG 1 cut(s) 921
PagI TCATGA 1 cut(s) 703
PcsI WCGNNNNNNNCGW 2 cut(s) 564, 630
PctI GAATGC 1 cut(s) 440
PfeI GAWTC 3 cut(s) 38, 586, 621
PflMI CCANNNNNTGG 1 cut(s) 399
PkrI GCNGC 3 cut(s) 350, 1060, 1348
PleI GAGTC 4 cut(s) 466, 571, 708, 742
PluTI GGCGCC 1 cut(s) 375
PpsI GAGTC 4 cut(s) 466, 571, 708, 742
PshAI GACNNNNGTC 1 cut(s) 966
Psp6I CCWGG 4 cut(s) 132, 591, 642, 937
PspGI CCWGG 4 cut(s) 132, 591, 642, 937
PspN4I GGNNCC 5 cut(s) 343, 373, 404, 548, 604
PspOMI GGGCCC 1 cut(s) 546
PspPI GGNCC 6 cut(s) 4, 341, 536, 546, 547, 640
PsuI RGATCY 1 cut(s) 1214
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 1 cut(s) 770
RsaNI GTAC 1 cut(s) 769
SaqAI TTAA 5 cut(s) 765, 813, 1047, 1268, 1280
SatI GCNGC 3 cut(s) 349, 1059, 1347
Sau3AI GATC 2 cut(s) 607, 1214
Sau96I GGNCC 6 cut(s) 4, 341, 536, 546, 547, 640
ScaI AGTACT 1 cut(s) 770
SchI GAGTC 4 cut(s) 467, 572, 709, 743
ScrFI CCNGG 7 cut(s) 134, 520, 545, 593, 644, 939, 1238
SduI GDGCHC 2 cut(s) 550, 1375
SfaNI GCATC 4 cut(s) 398, 1122, 1235, 1333
SfoI GGCGCC 1 cut(s) 373
Sfr274I CTCGAG 1 cut(s) 921
SinI GGWCC 2 cut(s) 4, 640
SlaI CTCGAG 1 cut(s) 921
SmlI CTYRAG 2 cut(s) 921, 1046
SmoI CTYRAG 2 cut(s) 921, 1046
SphI GCATGC 1 cut(s) 1365
Sse9I AATT 2 cut(s) 13, 1126
SsiI CCGC 9 cut(s) 261, 267, 273, 346, 349, 406, 447, 494, 1177
SspDI GGCGCC 1 cut(s) 371
SspMI CTAG 3 cut(s) 77, 1037, 1209
StyD4I CCNGG 7 cut(s) 132, 518, 543, 591, 642, 937, 1236
StyI CCWWGG 6 cut(s) 210, 657, 987, 1083, 1148, 1158
TaaI ACNGT 2 cut(s) 640, 1322
TaqI TCGA 6 cut(s) 357, 385, 489, 525, 561, 922
TasI AATT 2 cut(s) 13, 1126
TatI WGTACW 1 cut(s) 768
TauI GCSGC 1 cut(s) 351
TfiI GAWTC 3 cut(s) 38, 586, 621
Tru1I TTAA 5 cut(s) 765, 813, 1047, 1268, 1280
Tru9I TTAA 5 cut(s) 765, 813, 1047, 1268, 1280
TscAI CASTG 3 cut(s) 118, 1258, 1327
TseFI GTSAC 1 cut(s) 1306
TseI GCWGC 2 cut(s) 1058, 1346
Tsp45I GTSAC 1 cut(s) 1306
TspDTI ATGAA 4 cut(s) 447, 758, 920, 1122
TspGWI ACGGA 4 cut(s) 371, 407, 457, 556
TspRI CASTG 3 cut(s) 118, 1258, 1327
Van91I CCANNNNNTGG 1 cut(s) 399
Vha464I CTTAAG 1 cut(s) 1046
VneI GTGCAC 1 cut(s) 1371
VpaK11BI GGWCC 2 cut(s) 4, 640
XapI RAATTY 1 cut(s) 1126
XceI RCATGY 1 cut(s) 1365
XcmI CCANNNNNNNNNTGG 1 cut(s) 892
XhoI CTCGAG 1 cut(s) 921
XspI CTAG 3 cut(s) 77, 1037, 1209
ZrmI AGTACT 1 cut(s) 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.