Prupe.8G262000_v2.0.a1

Blue-light photoreceptor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
22093326 .. 22096092
2767 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G262000.2

Sequence Viewer

Length: 1380 bp
ATGGACCCCAATCTCCAAGTATCAGAAAACCCAGAATCTAAATCGTCAGAGGAACCAAACTCACTTGCCATTGTGCCTTCCTCATCGCTTCCTCCTTTTGCCACTGCTTCCCTCTCTCTTTCTCTCTCTACAATCCTCCCCACCCACTTTTTCCAACAACCCAAAGTTTCTACCTTGTTTTCTTCCCAGCCAAACAAGGTTAAGGTGCCCACTCAGGCCTCTTCCTTGGCTCACCTCTCTCTATCCACGGCCAATGTAACTCCTCCGAAGCTCTCATTCAAGTCCACCATCTCAGCCAACCCTCTGCAAAACCCTCTCTCTTTAGGCCCTCGCCGTCCTCTAGACCCCTCCAATGGGGCCGCAATTCGCCGAGCTTCCATTGTCTGGTTCAGAAACGATTTGCGTGTCCACGATAACGAGTGCCTCAACTCGGCCAACAACGAGTCCATGTCAGTCTTGCCCGTCTATTGCTTTGACCCGAGAGACTACGGAAAATCCTCTTCTGGGTTCGATAAGACCGGTCCATACCGTGCGTCCTTCTTGGTTGAATCGGTCTCAGACCTCCGCAAGAATCTGCAGGCAAGAGGGTCCGATCTGGTGGTCCGAATCGGGAAGCCCGAGACGGTTTTGGTGGAGCTGGCCAAGGCAATCGGCGCCGACGCCATTTATGCGCACAGAGAGGTTTCGCACGACGAGGTTAAGGCCGAGGACAAGATCGAAGCCGCTATGAAGGAGGAGAATGTGGAGGTCAAGTACTTCTGGGGAAGCACTCTGTACCATATGGATGATTTGCCATTTAAGTTGGAGGAAATGCCCACGAATTATGGTGGGTTTAGAGAGAAAGTAAAGGGATTGGAGGTGAGGAAGACGATCGAGGCTTTGGAACAAATGAAGGGCTTGCCCTCTCGTGGTGATGTGGAGCCTGGGGATATTCCTTCCTTAATGGATTTGGGTCTTAATCCATCTGCTACAATGTCTCAGGATGGAAGACCAGCTGCCAATGCTTCCATGGTGGGAGGGGAAGCTGAAGCCCTAGAGAGGCTCAAAAAGTTTGCAGCTGAGTGCCAAGCACAACCACCCAAGAGTGGCAAAGATGGAAGCCATGATAGCATATATGGTGCAAACTTTTCATGCAAGATCTCTCCATGGCTGGCCATGGGATGCCTCTCTCCCCGCAGCATGTTTGATGAGCTAAAGAAAACAGCTAACAGAACCATTTCTGCTTCCTCAAAGCGGGATGATGGTGGCAGTGGAATGAATTGGTTGATGTTTGAGTTGCTGTGGAGGGATTTCTTCAGATTTGTCACCAAGAAATACAGTTCTGCAAAGAAACAGCTTGACGCTGCTCCAGCCACAGCATGTACGGGTGCCCTTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

460

Amino Acids

50.07

Weight (kDa)

7.05

Isoelectric Point (pI)

46.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014144)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 672
AccB1I GGYRCC 3 cut(s) 205, 653, 1367
AccB7I CCANNNNNTGG 1 cut(s) 384
AciI CCGC 5 cut(s) 360, 565, 723, 1174, 1234
AcoI YGGCCR 4 cut(s) 249, 432, 639, 1152
AcuI CTGAAG 2 cut(s) 1047, 1279
AcyI GRCGYC 2 cut(s) 654, 660
AfaI GTAC 3 cut(s) 755, 776, 1363
AfiI CCNNNNNNNGG 9 cut(s) 353, 354, 384, 430, 504, 908, 1038, 1085, 1233
AgeI ACCGGT 1 cut(s) 518
AgsI TTSAA 2 cut(s) 280, 548
AjnI CCWGG 1 cut(s) 922
AluBI AGCT 9 cut(s) 271, 374, 637, 995, 1025, 1058, 1192, 1205, 1336
AluI AGCT 9 cut(s) 271, 374, 637, 995, 1025, 1058, 1192, 1205, 1336
Alw26I GTCTC 4 cut(s) 477, 559, 614, 981
Ama87I CYCGRG 2 cut(s) 478, 617
AoxI GGCC 8 cut(s) 216, 249, 325, 357, 432, 639, 702, 1152
ApeKI GCWGC 4 cut(s) 995, 1055, 1176, 1343
AsiGI ACCGGT 1 cut(s) 518
Asp700I GAANNNNTTC 1 cut(s) 1216
AspLEI GCGC 2 cut(s) 656, 673
AspS9I GGNCC 6 cut(s) 4, 326, 357, 521, 588, 601
AsuHPI GGTGA 4 cut(s) 224, 871, 923, 1297
AvaI CYCGRG 2 cut(s) 478, 617
AvaII GGWCC 4 cut(s) 4, 521, 588, 601
BaeGI GKGCMC 2 cut(s) 210, 1372
BalI TGGCCA 2 cut(s) 641, 1154
BanI GGYRCC 3 cut(s) 205, 653, 1367
BauI CACGAG 1 cut(s) 906
BbsI GAAGAC 2 cut(s) 872, 994
BbvI GCAGC 4 cut(s) 982, 1067, 1188, 1330
BccI CCATC 5 cut(s) 296, 970, 977, 1088, 1235
BceAI ACGGC 2 cut(s) 264, 318
BciT130I CCWGG 1 cut(s) 924
BcoDI GTCTC 4 cut(s) 477, 559, 614, 981
BfaI CTAG 2 cut(s) 341, 1034
BfmI CTRYAG 1 cut(s) 575
BfoI RGCGCY 1 cut(s) 657
BglII AGATCT 1 cut(s) 1137
BisI GCNGC 6 cut(s) 360, 723, 996, 1056, 1177, 1344
BlsI GCNGC 6 cut(s) 361, 724, 997, 1057, 1178, 1345
BmcAI AGTACT 1 cut(s) 755
Bme1390I CCNGG 1 cut(s) 924
Bme18I GGWCC 4 cut(s) 4, 521, 588, 601
BmeT110I CYCGRG 2 cut(s) 478, 617
BmgT120I GGNCC 6 cut(s) 4, 326, 357, 521, 588, 601
BmiI GGNNCC 8 cut(s) 6, 54, 207, 358, 589, 655, 921, 1369
BmrFI CCNGG 1 cut(s) 924
BmsI GCATC 1 cut(s) 1151
BpiI GAAGAC 2 cut(s) 872, 994
BpmI CTGGAG 1 cut(s) 1332
BsaHI GRCGYC 2 cut(s) 654, 660
BsaI GGTCTC 1 cut(s) 559
BsaJI CCNNGG 8 cut(s) 225, 246, 642, 705, 923, 1008, 1145, 1155
BsaWI WCCGGW 1 cut(s) 518
BsaXI ACNNNNNCTCC 2 cut(s) 737, 767
Bsc4I CCNNNNNNNGG 9 cut(s) 353, 354, 384, 430, 504, 908, 1038, 1085, 1233
Bse118I RCCGGY 1 cut(s) 518
BseBI CCWGG 1 cut(s) 924
BseDI CCNNGG 8 cut(s) 225, 246, 642, 705, 923, 1008, 1145, 1155
BseGI GGATG 4 cut(s) 790, 988, 1166, 1243
BseLI CCNNNNNNNGG 9 cut(s) 353, 354, 384, 430, 504, 908, 1038, 1085, 1233
BseMII CTCAG 5 cut(s) 227, 306, 570, 992, 1050
BseRI GAGGAG 2 cut(s) 252, 749
BseSI GKGCMC 2 cut(s) 210, 1372
BseXI GCAGC 4 cut(s) 982, 1067, 1188, 1330
BseYI CCCAGC 1 cut(s) 186
Bsh1285I CGRYCG 1 cut(s) 873
BshFI GGCC 8 cut(s) 218, 251, 327, 359, 434, 641, 704, 1154
BshNI GGYRCC 3 cut(s) 205, 653, 1367
BshTI ACCGGT 1 cut(s) 518
BsiEI CGRYCG 1 cut(s) 873
BsiHKCI CYCGRG 2 cut(s) 478, 617
BsiSI CCGG 1 cut(s) 519
BslI CCNNNNNNNGG 9 cut(s) 353, 354, 384, 430, 504, 908, 1038, 1085, 1233
BsmAI GTCTC 4 cut(s) 477, 559, 614, 981
BsmBI CGTCTC 1 cut(s) 614
BsnI GGCC 8 cut(s) 218, 251, 327, 359, 434, 641, 704, 1154
Bso31I GGTCTC 1 cut(s) 559
BsoBI CYCGRG 2 cut(s) 478, 617
Bsp1286I GDGCHC 2 cut(s) 210, 1372
Bsp143I GATC 4 cut(s) 592, 714, 870, 1137
Bsp19I CCATGG 3 cut(s) 1008, 1145, 1155
BspACI CCGC 5 cut(s) 360, 565, 723, 1174, 1234
BspANI GGCC 8 cut(s) 218, 251, 327, 359, 434, 641, 704, 1154
BspCNI CTCAG 5 cut(s) 226, 305, 569, 991, 1051
BspLI GGNNCC 8 cut(s) 6, 54, 207, 358, 589, 655, 921, 1369
BspMAI CTGCAG 1 cut(s) 579
BspT107I GGYRCC 3 cut(s) 205, 653, 1367
BspTNI GGTCTC 1 cut(s) 559
BsrFI RCCGGY 1 cut(s) 518
BssAI RCCGGY 1 cut(s) 518
BssECI CCNNGG 8 cut(s) 225, 246, 642, 705, 923, 1008, 1145, 1155
BssMI GATC 4 cut(s) 592, 714, 870, 1137
BssNI GRCGYC 2 cut(s) 654, 660
BssSI CACGAG 1 cut(s) 906
BssT1I CCWWGG 5 cut(s) 225, 642, 1008, 1145, 1155
Bst2BI CACGAG 1 cut(s) 906
Bst2UI CCWGG 1 cut(s) 924
Bst4CI ACNGT 3 cut(s) 530, 625, 1319
Bst6I CTCTTC 2 cut(s) 226, 505
BstACI GRCGYC 2 cut(s) 654, 660
BstC8I GCNNGC 4 cut(s) 579, 639, 899, 1152
BstDEI CTNAG 6 cut(s) 213, 292, 556, 978, 1059, 1377
BstDSI CCRYGG 4 cut(s) 246, 1008, 1145, 1155
BstF5I GGATG 4 cut(s) 790, 988, 1166, 1243
BstH2I RGCGCY 1 cut(s) 657
BstHHI GCGC 2 cut(s) 656, 673
BstKTI GATC 4 cut(s) 595, 717, 873, 1140
BstMAI GTCTC 4 cut(s) 477, 559, 614, 981
BstMBI GATC 4 cut(s) 592, 714, 870, 1137
BstMCI CGRYCG 1 cut(s) 873
BstMWI GCNNNNNNNGC 5 cut(s) 653, 668, 1001, 1107, 1349
BstNI CCWGG 1 cut(s) 924
BstNSI RCATGY 2 cut(s) 1183, 1362
BstSCI CCNGG 1 cut(s) 922
BstSFI CTRYAG 1 cut(s) 575
BstSLI GKGCMC 2 cut(s) 210, 1372
BstV1I GCAGC 4 cut(s) 982, 1067, 1188, 1330
BstV2I GAAGAC 2 cut(s) 872, 994
BstX2I RGATCY 1 cut(s) 1137
BstYI RGATCY 1 cut(s) 1137
BsuRI GGCC 8 cut(s) 218, 251, 327, 359, 434, 641, 704, 1154
BtgI CCRYGG 4 cut(s) 246, 1008, 1145, 1155
BtgZI GCGATG 1 cut(s) 69
BtsCI GGATG 4 cut(s) 790, 988, 1166, 1243
BtsI GCAGTG 2 cut(s) 102, 1255
BtsIMutI CAGTG 2 cut(s) 102, 1255
Cac8I GCNNGC 4 cut(s) 579, 639, 899, 1152
CfoI GCGC 2 cut(s) 656, 673
Cfr10I RCCGGY 1 cut(s) 518
Cfr13I GGNCC 6 cut(s) 4, 326, 357, 521, 588, 601
CseI GACGC 3 cut(s) 522, 668, 1349
Csp6I GTAC 3 cut(s) 754, 775, 1362
CspAI ACCGGT 1 cut(s) 518
CviAII CATG 8 cut(s) 448, 1009, 1103, 1131, 1146, 1156, 1180, 1359
CviQI GTAC 3 cut(s) 754, 775, 1362
DdeI CTNAG 6 cut(s) 213, 292, 556, 978, 1059, 1377
DinI GGCGCC 1 cut(s) 655
DpnI GATC 4 cut(s) 594, 716, 872, 1139
DpnII GATC 4 cut(s) 592, 714, 870, 1137
EaeI YGGCCR 4 cut(s) 249, 432, 639, 1152
Eam1104I CTCTTC 2 cut(s) 226, 505
EarI CTCTTC 2 cut(s) 226, 505
Eco130I CCWWGG 5 cut(s) 225, 642, 1008, 1145, 1155
Eco147I AGGCCT 1 cut(s) 218
Eco31I GGTCTC 1 cut(s) 559
Eco47I GGWCC 4 cut(s) 4, 521, 588, 601
Eco57I CTGAAG 2 cut(s) 1047, 1279
Eco88I CYCGRG 2 cut(s) 478, 617
EcoO109I RGGNCCY 1 cut(s) 326
EcoRII CCWGG 1 cut(s) 922
EcoT14I CCWWGG 5 cut(s) 225, 642, 1008, 1145, 1155
EgeI GGCGCC 1 cut(s) 655
EheI GGCGCC 1 cut(s) 655
ErhI CCWWGG 5 cut(s) 225, 642, 1008, 1145, 1155
Esp3I CGTCTC 1 cut(s) 614
FaeI CATG 8 cut(s) 451, 1012, 1106, 1134, 1149, 1159, 1183, 1362
FatI CATG 8 cut(s) 447, 1008, 1102, 1130, 1145, 1155, 1179, 1358
FauI CCCGC 2 cut(s) 1181, 1227
FauNDI CATATG 1 cut(s) 780
Fnu4HI GCNGC 6 cut(s) 360, 723, 996, 1056, 1177, 1344
FokI GGATG 4 cut(s) 797, 995, 1173, 1250
Fsp4HI GCNGC 6 cut(s) 360, 723, 996, 1056, 1177, 1344
FspAI RTGCGCAY 1 cut(s) 672
FspBI CTAG 2 cut(s) 341, 1034
FspI TGCGCA 1 cut(s) 672
GlaI GCGC 2 cut(s) 655, 672
GluI GCNGC 6 cut(s) 360, 723, 996, 1056, 1177, 1344
GsaI CCCAGC 1 cut(s) 190
GsuI CTGGAG 1 cut(s) 1332
HaeII RGCGCY 1 cut(s) 657
HaeIII GGCC 8 cut(s) 218, 251, 327, 359, 434, 641, 704, 1154
HapII CCGG 1 cut(s) 519
HgaI GACGC 3 cut(s) 522, 668, 1349
HhaI GCGC 2 cut(s) 656, 673
Hin1I GRCGYC 2 cut(s) 654, 660
Hin1II CATG 8 cut(s) 451, 1012, 1106, 1134, 1149, 1159, 1183, 1362
Hin6I GCGC 2 cut(s) 654, 671
HinP1I GCGC 2 cut(s) 654, 671
HinfI GANTC 5 cut(s) 35, 443, 548, 571, 606
HpaII CCGG 1 cut(s) 519
HphI GGTGA 4 cut(s) 224, 871, 923, 1297
Hpy166II GTNNAC 2 cut(s) 285, 409
Hpy188I TCNGA 8 cut(s) 25, 49, 267, 392, 559, 592, 605, 1298
Hpy188III TCNNGA 3 cut(s) 341, 610, 980
Hpy8I GTNNAC 2 cut(s) 285, 409
Hpy99I CGWCG 2 cut(s) 662, 695
HpyAV CCTTC 5 cut(s) 87, 547, 724, 886, 945
HpyCH4III ACNGT 3 cut(s) 530, 625, 1319
HpyCH4V TGCA 6 cut(s) 307, 577, 1055, 1121, 1134, 1325
HpyF10VI GCNNNNNNNGC 5 cut(s) 653, 668, 1001, 1107, 1349
HpyF3I CTNAG 6 cut(s) 213, 292, 556, 978, 1059, 1377
Hsp92I GRCGYC 2 cut(s) 654, 660
Hsp92II CATG 8 cut(s) 451, 1012, 1106, 1134, 1149, 1159, 1183, 1362
HspAI GCGC 2 cut(s) 654, 671
KasI GGCGCC 1 cut(s) 653
Kzo9I GATC 4 cut(s) 592, 714, 870, 1137
LmnI GCTCC 3 cut(s) 634, 919, 1351
Lsp1109I GCAGC 4 cut(s) 982, 1067, 1188, 1330
LweI GCATC 1 cut(s) 1151
MaeI CTAG 2 cut(s) 341, 1034
MaeIII GTNAC 2 cut(s) 256, 1303
MalI GATC 4 cut(s) 594, 716, 872, 1139
MboI GATC 4 cut(s) 592, 714, 870, 1137
MboII GAAGA 6 cut(s) 174, 213, 492, 877, 999, 1285
MflI RGATCY 1 cut(s) 1137
MhlI GDGCHC 2 cut(s) 210, 1372
MlsI TGGCCA 2 cut(s) 641, 1154
MluCI AATT 3 cut(s) 363, 820, 1258
MluNI TGGCCA 2 cut(s) 641, 1154
Mly113I GGCGCC 1 cut(s) 654
MlyI GAGTC 1 cut(s) 452
MmeI TCCRAC 2 cut(s) 178, 783
Mox20I TGGCCA 2 cut(s) 641, 1154
MroXI GAANNNNTTC 1 cut(s) 1216
MscI TGGCCA 2 cut(s) 641, 1154
MseI TTAA 5 cut(s) 201, 699, 798, 941, 957
MslI CAYNNNNRTG 1 cut(s) 783
Msp20I TGGCCA 2 cut(s) 641, 1154
MspA1I CMGCKG 2 cut(s) 995, 1058
MspI CCGG 1 cut(s) 519
MspR9I CCNGG 1 cut(s) 924
MvaI CCWGG 1 cut(s) 924
MwoI GCNNNNNNNGC 5 cut(s) 653, 668, 1001, 1107, 1349
NarI GGCGCC 1 cut(s) 654
NcoI CCATGG 3 cut(s) 1008, 1145, 1155
NdeI CATATG 1 cut(s) 780
NdeII GATC 4 cut(s) 592, 714, 870, 1137
NlaIII CATG 8 cut(s) 451, 1012, 1106, 1134, 1149, 1159, 1183, 1362
NlaIV GGNNCC 8 cut(s) 6, 54, 207, 358, 589, 655, 921, 1369
NmeAIII GCCGAG 3 cut(s) 395, 410, 730
NmuCI GTSAC 1 cut(s) 1303
NsbI TGCGCA 1 cut(s) 672
NspI RCATGY 2 cut(s) 1183, 1362
PceI AGGCCT 1 cut(s) 218
PcsI WCGNNNNNNNCGW 1 cut(s) 615
PdmI GAANNNNTTC 1 cut(s) 1216
PfeI GAWTC 4 cut(s) 35, 548, 571, 606
PflMI CCANNNNNTGG 1 cut(s) 384
PinAI ACCGGT 1 cut(s) 518
PkrI GCNGC 6 cut(s) 361, 724, 997, 1057, 1178, 1345
Ple19I CGATCG 1 cut(s) 873
PleI GAGTC 1 cut(s) 451
PluTI GGCGCC 1 cut(s) 657
PpsI GAGTC 1 cut(s) 451
Psp6I CCWGG 1 cut(s) 922
PspFI CCCAGC 1 cut(s) 186
PspGI CCWGG 1 cut(s) 922
PspN4I GGNNCC 8 cut(s) 6, 54, 207, 358, 589, 655, 921, 1369
PspPI GGNCC 6 cut(s) 4, 326, 357, 521, 588, 601
PstI CTGCAG 1 cut(s) 579
PsuI RGATCY 1 cut(s) 1137
PvuI CGATCG 1 cut(s) 873
PvuII CAGCTG 2 cut(s) 995, 1058
RsaI GTAC 3 cut(s) 755, 776, 1363
RsaNI GTAC 3 cut(s) 754, 775, 1362
RseI CAYNNNNRTG 1 cut(s) 783
SaqAI TTAA 5 cut(s) 201, 699, 798, 941, 957
SatI GCNGC 6 cut(s) 360, 723, 996, 1056, 1177, 1344
Sau3AI GATC 4 cut(s) 592, 714, 870, 1137
Sau96I GGNCC 6 cut(s) 4, 326, 357, 521, 588, 601
ScaI AGTACT 1 cut(s) 755
SchI GAGTC 1 cut(s) 452
ScrFI CCNGG 1 cut(s) 924
SduI GDGCHC 2 cut(s) 210, 1372
SfaNI GCATC 1 cut(s) 1151
SfcI CTRYAG 1 cut(s) 575
SfoI GGCGCC 1 cut(s) 655
SinI GGWCC 4 cut(s) 4, 521, 588, 601
SmiMI CAYNNNNRTG 1 cut(s) 783
Sse9I AATT 3 cut(s) 363, 820, 1258
SseBI AGGCCT 1 cut(s) 218
SsiI CCGC 5 cut(s) 360, 565, 723, 1174, 1234
SspDI GGCGCC 1 cut(s) 653
SspMI CTAG 2 cut(s) 341, 1034
StuI AGGCCT 1 cut(s) 218
StyD4I CCNGG 1 cut(s) 922
StyI CCWWGG 5 cut(s) 225, 642, 1008, 1145, 1155
TaaI ACNGT 3 cut(s) 530, 625, 1319
TaqI TCGA 3 cut(s) 510, 717, 873
TaqII GACCGA 1 cut(s) 541
TasI AATT 3 cut(s) 363, 820, 1258
TatI WGTACW 1 cut(s) 753
TauI GCSGC 2 cut(s) 362, 725
TfiI GAWTC 4 cut(s) 35, 548, 571, 606
Tru1I TTAA 5 cut(s) 201, 699, 798, 941, 957
Tru9I TTAA 5 cut(s) 201, 699, 798, 941, 957
TscAI CASTG 2 cut(s) 109, 1255
TseFI GTSAC 1 cut(s) 1303
TseI GCWGC 4 cut(s) 995, 1055, 1176, 1343
Tsp45I GTSAC 1 cut(s) 1303
TspDTI ATGAA 4 cut(s) 743, 905, 1119, 1271
TspGWI ACGGA 1 cut(s) 504
TspRI CASTG 2 cut(s) 109, 1255
Van91I CCANNNNNTGG 1 cut(s) 384
VpaK11BI GGWCC 4 cut(s) 4, 521, 588, 601
XbaI TCTAGA 1 cut(s) 340
XceI RCATGY 2 cut(s) 1183, 1362
XcmI CCANNNNNNNNNTGG 1 cut(s) 1006
XmnI GAANNNNTTC 1 cut(s) 1216
XspI CTAG 2 cut(s) 341, 1034
ZrmI AGTACT 1 cut(s) 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.