FvH4_2g30860

Guanine nucleotide-binding protein alpha-1

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
23795941 .. 23800777
4837 bp
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UTR
Exon/CDS
Intron
FvH4_2g30860.t2

Sequence Viewer

Length: 975 bp
ATGGGCTCACTCTGCAGCAAAAGCCGGCATTACAATGAAGCAGACAATGAAGAGAACGCACAGACTGCAGAAATTGAAAGGAGAATTGAACAAGAAACGAAGGCTGAAAAACATATCCAGAAACTTCTCCTACTAGGTGCTGGGGAGTCAGGGAAGTCCACAATCTTCAAGCAGATAAAGCTTTTGTTTCAAACCGGCTTCGATGATGCAGAGCTCAAGAGCTACATCTCAGTCATACATGCCAATGTGTATCAGACCATAAAAATATTGTATGATGGGTCAAAGGAGCTCGCTCAGAATAACAATGAAACATATGAAATCTCCAGTGAAAATCAGGAAATTGGAGAGAAACTGTCAAAAATAGGTGGTAGATTGGATTATCCACGTCTGACTAAAGAGCTTGCACAGGAGATAGAGACTCTTTGGAAAGATGCCGCAATTCAGGAAACATATGCTCGGGGTAATGAACTCCAAGTTCCTGACTGTGCCAACTATTTCATGGATAATTTACAAAGATTAGCTGACTCAAATTATATTCCAACCAAGGAGGATGTTCTTTATGCAAGAGTTCGTACAACTGGTGTTGTAGAGATCCAGTTCAGCCCGGTTGGAGAAAACAAGAAAAGTGGCGAAGTATATAGACTCTTTGATGTTGGAGGCCAGAGAAACGAGAGGAGGAAATGGATCCATCTATTTGAAGGTGTTACAGCTGTTATATTTTGTGCTGCTGTTAGCGATTATGATCAAACACTCTTTGAAGATGAAAGCAAGAATCGAATGATGGAAACAAAGGAACTTTTTGACTGGGTCCTGAAGCAACCTTGTTTTGAGAAAACGTCCTTCATGCTATTTCTAAACAAGTTTGACATATTCGAGAAGAAGGTTCTAAAAGTGCCACTTAACGTGTGCGAGTGGTTCAAAGATTACCAGCCAGTTTCAACAGGAAAACAAGAAATTGAACATGCGTATGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0001101 GO:0001664 GO:0001789 GO:0001882 GO:0001883 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0003924 GO:0004857 GO:0005095 GO:0005102 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005834 GO:0005886 GO:0005911 GO:0006082 GO:0006520 GO:0006558 GO:0006570 GO:0006571 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009094 GO:0009095 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009637 GO:0009642 GO:0009645 GO:0009657 GO:0009668 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009739 GO:0009740 GO:0009741 GO:0009742 GO:0009743 GO:0009746 GO:0009749 GO:0009755 GO:0009785 GO:0009787 GO:0009788 GO:0009789 GO:0009791 GO:0009845 GO:0009870 GO:0009898 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010027 GO:0010033 GO:0010119 GO:0010244 GO:0010476 GO:0010646 GO:0010647 GO:0010648 GO:0012505 GO:0014070 GO:0016020 GO:0016043 GO:0016053 GO:0016247 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0017144 GO:0019001 GO:0019438 GO:0019752 GO:0019897 GO:0019898 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030054 GO:0030234 GO:0030522 GO:0030695 GO:0031234 GO:0031347 GO:0031349 GO:0031683 GO:0031984 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032870 GO:0032991 GO:0033993 GO:0034260 GO:0034284 GO:0035639 GO:0036094 GO:0040008 GO:0042127 GO:0042175 GO:0042221 GO:0043086 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0043436 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044877 GO:0045088 GO:0045089 GO:0045927 GO:0046394 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0048583 GO:0048584 GO:0048585 GO:0048638 GO:0048639 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051336 GO:0051346 GO:0051716 GO:0055044 GO:0060589 GO:0061024 GO:0065007 GO:0065009 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071367 GO:0071370 GO:0071383 GO:0071396 GO:0071407 GO:0071478 GO:0071482 GO:0071483 GO:0071495 GO:0071704 GO:0071840 GO:0071944 GO:0072593 GO:0080134 GO:0090351 GO:0097159 GO:0097305 GO:0097306 GO:0097367 GO:0098552 GO:0098562 GO:0098772 GO:0098796 GO:0098797 GO:0098827 GO:0104004 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901419 GO:1901420 GO:1901421 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1901700 GO:1901701 GO:1902221 GO:1902223 GO:1902494 GO:1905360 GO:1905957 GO:1905958 GO:1905959
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

325

Amino Acids

37.52

Weight (kDa)

5.15

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-alpha PF00503 29 - 378 8e-108 G-protein alpha subunit
Arf PF00025 221 - 300 1.4e-07 ADP-ribosylation factor family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 435
AclWI GGATC 3 cut(s) 586, 679, 692
AcuI CTGAAG 1 cut(s) 833
AfaI GTAC 1 cut(s) 574
AflIII ACRYGT 1 cut(s) 903
AgsI TTSAA 9 cut(s) 77, 89, 169, 191, 698, 758, 919, 939, 959
AjiI CACGTC 1 cut(s) 386
AluBI AGCT 7 cut(s) 181, 214, 222, 289, 400, 521, 710
AluI AGCT 7 cut(s) 181, 214, 222, 289, 400, 521, 710
Alw21I GWGCWC 2 cut(s) 216, 291
Alw26I GTCTC 1 cut(s) 410
AlwI GGATC 3 cut(s) 586, 679, 692
Ama87I CYCGRG 1 cut(s) 456
AoxI GGCC 1 cut(s) 658
ApeKI GCWGC 2 cut(s) 15, 725
AspS9I GGNCC 1 cut(s) 808
AsuC2I CCSGG 1 cut(s) 605
AvaI CYCGRG 1 cut(s) 456
AvaII GGWCC 1 cut(s) 808
BamHI GGATCC 1 cut(s) 684
BanII GRGCYC 3 cut(s) 8, 216, 291
Bbv12I GWGCWC 2 cut(s) 216, 291
BbvI GCAGC 2 cut(s) 27, 712
BccI CCATC 3 cut(s) 269, 696, 775
BclI TGATCA 1 cut(s) 742
BcnI CCSGG 1 cut(s) 605
BcoDI GTCTC 1 cut(s) 410
BfaI CTAG 1 cut(s) 134
BfmI CTRYAG 2 cut(s) 13, 66
BisI GCNGC 3 cut(s) 16, 435, 726
BlsI GCNGC 3 cut(s) 17, 436, 727
Bme1390I CCNGG 1 cut(s) 605
Bme18I GGWCC 1 cut(s) 808
BmeT110I CYCGRG 1 cut(s) 456
BmgBI CACGTC 1 cut(s) 386
BmgT120I GGNCC 1 cut(s) 808
BmiI GGNNCC 2 cut(s) 686, 809
BmrFI CCNGG 1 cut(s) 605
BmrI ACTGGG 1 cut(s) 814
BmsI GCATC 2 cut(s) 196, 421
BmuI ACTGGG 1 cut(s) 814
BpmI CTGGAG 1 cut(s) 307
BpuEI CTTGAG 1 cut(s) 200
BpuMI CCSGG 1 cut(s) 605
BsaBI GATNNNNATC 1 cut(s) 741
BsaJI CCNNGG 1 cut(s) 543
Bse118I RCCGGY 2 cut(s) 24, 194
Bse1I ACTGG 5 cut(s) 324, 583, 595, 809, 932
Bse8I GATNNNNATC 1 cut(s) 741
BseDI CCNNGG 1 cut(s) 543
BseGI GGATG 1 cut(s) 556
BseJI GATNNNNATC 1 cut(s) 741
BseMII CTCAG 2 cut(s) 243, 308
BseNI ACTGG 5 cut(s) 324, 583, 595, 809, 932
BseRI GAGGAG 1 cut(s) 688
BseXI GCAGC 2 cut(s) 27, 712
BseYI CCCAGC 1 cut(s) 140
BshFI GGCC 1 cut(s) 660
BsiHKAI GWGCWC 2 cut(s) 216, 291
BsiHKCI CYCGRG 1 cut(s) 456
BsiSI CCGG 3 cut(s) 25, 195, 605
BsmAI GTCTC 1 cut(s) 410
BsnI GGCC 1 cut(s) 660
BsoBI CYCGRG 1 cut(s) 456
Bsp1286I GDGCHC 3 cut(s) 8, 216, 291
Bsp143I GATC 3 cut(s) 591, 684, 742
BspACI CCGC 1 cut(s) 435
BspANI GGCC 1 cut(s) 660
BspCNI CTCAG 2 cut(s) 242, 307
BspLI GGNNCC 2 cut(s) 686, 809
BspMAI CTGCAG 2 cut(s) 17, 70
BspPI GGATC 3 cut(s) 586, 679, 692
BsrFI RCCGGY 2 cut(s) 24, 194
BsrI ACTGG 5 cut(s) 324, 583, 595, 809, 932
BssAI RCCGGY 2 cut(s) 24, 194
BssECI CCNNGG 1 cut(s) 543
BssMI GATC 3 cut(s) 591, 684, 742
BssT1I CCWWGG 1 cut(s) 543
Bst4CI ACNGT 2 cut(s) 354, 485
Bst6I CTCTTC 1 cut(s) 45
BstAPI GCANNNNNTGC 1 cut(s) 65
BstC8I GCNNGC 3 cut(s) 26, 291, 402
BstDEI CTNAG 2 cut(s) 229, 294
BstF5I GGATG 1 cut(s) 556
BstKTI GATC 3 cut(s) 594, 687, 745
BstMAI GTCTC 1 cut(s) 410
BstMBI GATC 3 cut(s) 591, 684, 742
BstMWI GCNNNNNNNGC 4 cut(s) 12, 21, 65, 178
BstNSI RCATGY 2 cut(s) 242, 965
BstSCI CCNGG 1 cut(s) 603
BstSFI CTRYAG 2 cut(s) 13, 66
BstV1I GCAGC 2 cut(s) 27, 712
BstX2I RGATCY 2 cut(s) 591, 684
BstYI RGATCY 2 cut(s) 591, 684
BsuRI GGCC 1 cut(s) 660
BtrI CACGTC 1 cut(s) 386
BtsCI GGATG 1 cut(s) 556
BtsIMutI CAGTG 1 cut(s) 331
Cac8I GCNNGC 3 cut(s) 26, 291, 402
Cfr10I RCCGGY 2 cut(s) 24, 194
Cfr13I GGNCC 1 cut(s) 808
Csp6I GTAC 1 cut(s) 573
CspCI CAANNNNNGTGG 2 cut(s) 607, 642
CviAII CATG 4 cut(s) 239, 499, 844, 962
CviQI GTAC 1 cut(s) 573
DdeI CTNAG 2 cut(s) 229, 294
DpnI GATC 3 cut(s) 593, 686, 744
DpnII GATC 3 cut(s) 591, 684, 742
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
Ecl136II GAGCTC 2 cut(s) 214, 289
Eco130I CCWWGG 1 cut(s) 543
Eco24I GRGCYC 3 cut(s) 8, 216, 291
Eco47I GGWCC 1 cut(s) 808
Eco53kI GAGCTC 2 cut(s) 214, 289
Eco57I CTGAAG 1 cut(s) 833
Eco88I CYCGRG 1 cut(s) 456
EcoICRI GAGCTC 2 cut(s) 214, 289
EcoO109I RGGNCCY 1 cut(s) 808
EcoT14I CCWWGG 1 cut(s) 543
EcoT38I GRGCYC 3 cut(s) 8, 216, 291
ErhI CCWWGG 1 cut(s) 543
FaeI CATG 4 cut(s) 242, 502, 847, 965
FalI AAGNNNNNCTT 2 cut(s) 882, 914
FatI CATG 4 cut(s) 238, 498, 843, 961
FauNDI CATATG 2 cut(s) 313, 451
FbaI TGATCA 1 cut(s) 742
Fnu4HI GCNGC 3 cut(s) 16, 435, 726
FokI GGATG 1 cut(s) 563
FriOI GRGCYC 3 cut(s) 8, 216, 291
Fsp4HI GCNGC 3 cut(s) 16, 435, 726
FspBI CTAG 1 cut(s) 134
GluI GCNGC 3 cut(s) 16, 435, 726
GsaI CCCAGC 1 cut(s) 144
GsuI CTGGAG 1 cut(s) 307
HaeIII GGCC 1 cut(s) 660
HapII CCGG 3 cut(s) 25, 195, 605
Hin1II CATG 4 cut(s) 242, 502, 847, 965
HindIII AAGCTT 1 cut(s) 179
HinfI GANTC 5 cut(s) 146, 418, 524, 642, 772
HpaII CCGG 3 cut(s) 25, 195, 605
Hpy166II GTNNAC 1 cut(s) 159
Hpy188I TCNGA 3 cut(s) 255, 297, 390
Hpy188III TCNNGA 7 cut(s) 118, 217, 335, 443, 479, 811, 874
Hpy8I GTNNAC 1 cut(s) 159
HpyAV CCTTC 4 cut(s) 94, 692, 850, 874
HpyCH4III ACNGT 2 cut(s) 354, 485
HpyCH4IV ACGT 3 cut(s) 385, 836, 903
HpyCH4V TGCA 5 cut(s) 15, 68, 209, 404, 563
HpyF10VI GCNNNNNNNGC 4 cut(s) 12, 21, 65, 178
HpyF3I CTNAG 2 cut(s) 229, 294
HpySE526I ACGT 3 cut(s) 385, 836, 903
Hsp92II CATG 4 cut(s) 242, 502, 847, 965
KroI GCCGGC 1 cut(s) 24
KroNI GCCGGC 1 cut(s) 26
Ksp22I TGATCA 1 cut(s) 742
Kzo9I GATC 3 cut(s) 591, 684, 742
LmnI GCTCC 1 cut(s) 286
Lsp1109I GCAGC 2 cut(s) 27, 712
LweI GCATC 2 cut(s) 196, 421
MaeI CTAG 1 cut(s) 134
MaeII ACGT 3 cut(s) 385, 836, 903
MaeIII GTNAC 1 cut(s) 703
MalI GATC 3 cut(s) 593, 686, 744
MboI GATC 3 cut(s) 591, 684, 742
MboII GAAGA 4 cut(s) 62, 157, 770, 889
MflI RGATCY 2 cut(s) 591, 684
MhlI GDGCHC 3 cut(s) 8, 216, 291
MluCI AATT 7 cut(s) 72, 84, 339, 438, 505, 529, 954
MlyI GAGTC 4 cut(s) 155, 412, 518, 636
MmeI TCCRAC 3 cut(s) 563, 589, 634
MnlI CCTC 4 cut(s) 541, 650, 666, 669
MroNI GCCGGC 1 cut(s) 24
MseI TTAA 1 cut(s) 900
MslI CAYNNNNRTG 3 cut(s) 33, 243, 966
MspA1I CMGCKG 1 cut(s) 710
MspI CCGG 3 cut(s) 25, 195, 605
MspR9I CCNGG 1 cut(s) 605
MwoI GCNNNNNNNGC 4 cut(s) 12, 21, 65, 178
NaeI GCCGGC 1 cut(s) 26
NciI CCSGG 1 cut(s) 605
NdeI CATATG 2 cut(s) 313, 451
NdeII GATC 3 cut(s) 591, 684, 742
NgoMIV GCCGGC 1 cut(s) 24
NlaIII CATG 4 cut(s) 242, 502, 847, 965
NlaIV GGNNCC 2 cut(s) 686, 809
NspI RCATGY 2 cut(s) 242, 965
PdiI GCCGGC 1 cut(s) 26
PfeI GAWTC 1 cut(s) 772
PflFI GACNNNGTC 1 cut(s) 806
PkrI GCNGC 3 cut(s) 17, 436, 727
PleI GAGTC 4 cut(s) 154, 412, 518, 636
PpsI GAGTC 4 cut(s) 154, 412, 518, 636
PpuMI RGGWCCY 1 cut(s) 808
Psp124BI GAGCTC 2 cut(s) 216, 291
Psp5II RGGWCCY 1 cut(s) 808
PspFI CCCAGC 1 cut(s) 140
PspN4I GGNNCC 2 cut(s) 686, 809
PspPI GGNCC 1 cut(s) 808
PspPPI RGGWCCY 1 cut(s) 808
PstI CTGCAG 2 cut(s) 17, 70
PsuI RGATCY 2 cut(s) 591, 684
PsyI GACNNNGTC 1 cut(s) 806
PvuII CAGCTG 1 cut(s) 710
RsaI GTAC 1 cut(s) 574
RsaNI GTAC 1 cut(s) 573
RseI CAYNNNNRTG 3 cut(s) 33, 243, 966
SacI GAGCTC 2 cut(s) 216, 291
SaqAI TTAA 1 cut(s) 900
SatI GCNGC 3 cut(s) 16, 435, 726
Sau3AI GATC 3 cut(s) 591, 684, 742
Sau96I GGNCC 1 cut(s) 808
SchI GAGTC 4 cut(s) 155, 412, 518, 636
ScrFI CCNGG 1 cut(s) 605
SduI GDGCHC 3 cut(s) 8, 216, 291
SfaNI GCATC 2 cut(s) 196, 421
SfcI CTRYAG 2 cut(s) 13, 66
SinI GGWCC 1 cut(s) 808
SmiMI CAYNNNNRTG 3 cut(s) 33, 243, 966
SmlI CTYRAG 1 cut(s) 215
SmoI CTYRAG 1 cut(s) 215
Sse9I AATT 7 cut(s) 72, 84, 339, 438, 505, 529, 954
SsiI CCGC 1 cut(s) 435
SspI AATATT 1 cut(s) 267
SspMI CTAG 1 cut(s) 134
SstI GAGCTC 2 cut(s) 216, 291
StyD4I CCNGG 1 cut(s) 603
StyI CCWWGG 1 cut(s) 543
TaaI ACNGT 2 cut(s) 354, 485
TaiI ACGT 3 cut(s) 388, 839, 906
TaqI TCGA 3 cut(s) 201, 775, 873
TasI AATT 7 cut(s) 72, 84, 339, 438, 505, 529, 954
TauI GCSGC 1 cut(s) 437
TfiI GAWTC 1 cut(s) 772
Tru1I TTAA 1 cut(s) 900
Tru9I TTAA 1 cut(s) 900
TscAI CASTG 1 cut(s) 331
TseI GCWGC 2 cut(s) 15, 725
TspDTI ATGAA 8 cut(s) 51, 63, 321, 330, 480, 487, 777, 832
TspRI CASTG 1 cut(s) 331
Tth111I GACNNNGTC 1 cut(s) 806
VpaK11BI GGWCC 1 cut(s) 808
XceI RCATGY 2 cut(s) 242, 965
XcmI CCANNNNNNNNNTGG 1 cut(s) 496
XspI CTAG 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.