Rh6DG511100

Guanine nucleotide-binding protein alpha-1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
66445764 .. 66451250
5487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG511100.1

Sequence Viewer

Length: 906 bp
ATGCATGATGTGGTTGAACAGATATTGTATGATGGGTCAAAGGAGCTTGCTCAGAATGACAGTGAAACATATGAAATATCTAGTGAAAATCAGGAAATTGGAGAGAAACTATCAAAAATAGGGGGCAGATTGGATTATCCACGTCTAACTAAAGAGCTTGCACAGGAGATAGAGACTCTTTGGAAAGCTGCTGCAATTCAGGAAACATATACTCGTGGTAATGAACTCCAAGTTCCTGATTGTGCCAACTATTTCATGGAAAATCTACAAAGATTAGCTGACACAAATTACATTCCAACCAAGGAAGATGTTCTTTATGCAAGAGTTCGTACAACTGGTGTTGTAGAGATCCAGTTCAGCCCTGTTGGCGAAAACAAGAAAAGTGGTGAAGTATATAGACTCTTTGATGTTGGAGGCCAGAGAAACGAGAGGAGGAAATGGATCCATCTTTTTGAAGGTGTTACAGCTGTTATATTTTGTGCTGCTGTTAGCGATTATGATCAAACACTCTTTGAAGATGAAAGCAAGAATCGAATGATGGAAACAAAGGAACTTTTTGACTGGGTCCTGAAGCAACCTTGTTTTGAGAAAACGTCCTTCATGCTATTTCTAAACAAGTTCGATATATTCGAGAAGAAGGTTCTAAAGGTGCCACTTAATGTGTGTGAGTGGTTCAAAGATTACCAGCCAGTTTCTACAGGAAAACAAGAAATTGAACATGCATACGAGTTTGTGAAGAAAAAATTTGAGGAATTGTATTTTCAGAGCACCACCCCGGATCGTGTGGACCGCGTGTTTAAGATCTATAGAACAACTGCCCTTGATCAAAAGTTGGTGAAGAAGACTTTCAAGCTGGTGGATGAGACCTTAAGACGGAGAAATCTGTTCGAGGCAGGTTTGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0001101 GO:0001664 GO:0001789 GO:0001882 GO:0001883 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0003924 GO:0004857 GO:0005095 GO:0005102 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005834 GO:0005886 GO:0005911 GO:0006082 GO:0006520 GO:0006558 GO:0006570 GO:0006571 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009094 GO:0009095 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009637 GO:0009642 GO:0009645 GO:0009657 GO:0009668 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009739 GO:0009740 GO:0009741 GO:0009742 GO:0009743 GO:0009746 GO:0009749 GO:0009755 GO:0009785 GO:0009787 GO:0009788 GO:0009789 GO:0009791 GO:0009845 GO:0009870 GO:0009898 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010027 GO:0010033 GO:0010119 GO:0010244 GO:0010476 GO:0010646 GO:0010647 GO:0010648 GO:0012505 GO:0014070 GO:0016020 GO:0016043 GO:0016053 GO:0016247 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0017144 GO:0019001 GO:0019438 GO:0019752 GO:0019897 GO:0019898 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030054 GO:0030234 GO:0030522 GO:0030695 GO:0031234 GO:0031347 GO:0031349 GO:0031683 GO:0031984 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032870 GO:0032991 GO:0033993 GO:0034260 GO:0034284 GO:0035639 GO:0036094 GO:0040008 GO:0042127 GO:0042175 GO:0042221 GO:0043086 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0043436 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044877 GO:0045088 GO:0045089 GO:0045927 GO:0046394 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0048583 GO:0048584 GO:0048585 GO:0048638 GO:0048639 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051336 GO:0051346 GO:0051716 GO:0055044 GO:0060589 GO:0061024 GO:0065007 GO:0065009 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071367 GO:0071370 GO:0071383 GO:0071396 GO:0071407 GO:0071478 GO:0071482 GO:0071483 GO:0071495 GO:0071704 GO:0071840 GO:0071944 GO:0072593 GO:0080134 GO:0090351 GO:0097159 GO:0097305 GO:0097306 GO:0097367 GO:0098552 GO:0098562 GO:0098772 GO:0098796 GO:0098797 GO:0098827 GO:0104004 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901419 GO:1901420 GO:1901421 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1901700 GO:1901701 GO:1902221 GO:1902223 GO:1902494 GO:1905360 GO:1905957 GO:1905958 GO:1905959
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

301

Amino Acids

35.4

Weight (kDa)

5.35

Isoelectric Point (pI)

37.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-alpha PF00503 26 - 289 5.3e-82 G-protein alpha subunit
Arf PF00025 132 - 211 9.5e-08 ADP-ribosylation factor family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 884
AccB1I GGYRCC 1 cut(s) 649
AccII CGCG 1 cut(s) 792
AciI CCGC 1 cut(s) 790
AclWI GGATC 4 cut(s) 343, 436, 449, 786
AcsI RAATTY 1 cut(s) 743
AcuI CTGAAG 1 cut(s) 590
AfaI GTAC 1 cut(s) 331
AfiI CCNNNNNNNGG 1 cut(s) 873
AflII CTTAAG 1 cut(s) 868
AgsI TTSAA 6 cut(s) 17, 455, 515, 676, 716, 850
AjiI CACGTC 1 cut(s) 143
AluBI AGCT 6 cut(s) 46, 157, 188, 278, 467, 853
AluI AGCT 6 cut(s) 46, 157, 188, 278, 467, 853
Alw21I GWGCWC 1 cut(s) 770
Alw26I GTCTC 2 cut(s) 167, 857
AlwI GGATC 4 cut(s) 343, 436, 449, 786
AoxI GGCC 1 cut(s) 415
ApeKI GCWGC 3 cut(s) 188, 191, 482
ApoI RAATTY 1 cut(s) 743
Asp700I GAANNNNTTC 2 cut(s) 309, 845
AspS9I GGNCC 2 cut(s) 565, 787
AsuC2I CCSGG 1 cut(s) 776
AsuHPI GGTGA 2 cut(s) 398, 847
AvaII GGWCC 2 cut(s) 565, 787
BamHI GGATCC 1 cut(s) 441
BanI GGYRCC 1 cut(s) 649
BauI CACGAG 1 cut(s) 213
BbsI GAAGAC 1 cut(s) 848
Bbv12I GWGCWC 1 cut(s) 770
BbvI GCAGC 3 cut(s) 175, 178, 469
BccI CCATC 3 cut(s) 26, 453, 532
BclI TGATCA 2 cut(s) 499, 823
BcnI CCSGG 1 cut(s) 776
BcoDI GTCTC 2 cut(s) 167, 857
BfaI CTAG 1 cut(s) 81
BfmI CTRYAG 2 cut(s) 696, 805
BfrI CTTAAG 1 cut(s) 868
BfuAI ACCTGC 1 cut(s) 884
BglI GCCNNNNNGGC 1 cut(s) 366
BglII AGATCT 1 cut(s) 801
BisI GCNGC 3 cut(s) 189, 192, 483
BlsI GCNGC 3 cut(s) 190, 193, 484
Bme1390I CCNGG 1 cut(s) 776
Bme18I GGWCC 2 cut(s) 565, 787
BmgBI CACGTC 1 cut(s) 143
BmgT120I GGNCC 2 cut(s) 565, 787
BmiI GGNNCC 3 cut(s) 443, 566, 651
BmrFI CCNGG 1 cut(s) 776
BmrI ACTGGG 1 cut(s) 571
BmuI ACTGGG 1 cut(s) 571
BpiI GAAGAC 1 cut(s) 848
BpuMI CCSGG 1 cut(s) 776
BsaBI GATNNNNATC 1 cut(s) 498
BsaI GGTCTC 1 cut(s) 857
BsaJI CCNNGG 2 cut(s) 300, 774
Bsc4I CCNNNNNNNGG 1 cut(s) 873
Bse1I ACTGG 4 cut(s) 340, 352, 566, 689
Bse8I GATNNNNATC 1 cut(s) 498
BseDI CCNNGG 2 cut(s) 300, 774
BseGI GGATG 1 cut(s) 865
BseJI GATNNNNATC 1 cut(s) 498
BseLI CCNNNNNNNGG 1 cut(s) 873
BseMII CTCAG 1 cut(s) 65
BseNI ACTGG 4 cut(s) 340, 352, 566, 689
BseRI GAGGAG 1 cut(s) 445
BseXI GCAGC 3 cut(s) 175, 178, 469
Bsh1236I CGCG 1 cut(s) 792
BshFI GGCC 1 cut(s) 417
BshNI GGYRCC 1 cut(s) 649
BsiHKAI GWGCWC 1 cut(s) 770
BsiSI CCGG 1 cut(s) 776
BslI CCNNNNNNNGG 1 cut(s) 873
BsmAI GTCTC 2 cut(s) 167, 857
BsnI GGCC 1 cut(s) 417
Bso31I GGTCTC 1 cut(s) 857
Bsp1286I GDGCHC 1 cut(s) 770
Bsp143I GATC 6 cut(s) 348, 441, 499, 778, 801, 823
BspACI CCGC 1 cut(s) 790
BspANI GGCC 1 cut(s) 417
BspCNI CTCAG 1 cut(s) 64
BspFNI CGCG 1 cut(s) 792
BspLI GGNNCC 3 cut(s) 443, 566, 651
BspMI ACCTGC 1 cut(s) 884
BspPI GGATC 4 cut(s) 343, 436, 449, 786
BspT107I GGYRCC 1 cut(s) 649
BspTI CTTAAG 1 cut(s) 868
BspTNI GGTCTC 1 cut(s) 857
BsrI ACTGG 4 cut(s) 340, 352, 566, 689
BssECI CCNNGG 2 cut(s) 300, 774
BssMI GATC 6 cut(s) 348, 441, 499, 778, 801, 823
BssSI CACGAG 1 cut(s) 213
BssT1I CCWWGG 1 cut(s) 300
Bst2BI CACGAG 1 cut(s) 213
Bst4CI ACNGT 1 cut(s) 62
BstAFI CTTAAG 1 cut(s) 868
BstC8I GCNNGC 2 cut(s) 48, 159
BstDEI CTNAG 1 cut(s) 51
BstF5I GGATG 1 cut(s) 865
BstFNI CGCG 1 cut(s) 792
BstKTI GATC 6 cut(s) 351, 444, 502, 781, 804, 826
BstMAI GTCTC 2 cut(s) 167, 857
BstMBI GATC 6 cut(s) 348, 441, 499, 778, 801, 823
BstMWI GCNNNNNNNGC 1 cut(s) 366
BstNSI RCATGY 1 cut(s) 722
BstSCI CCNGG 1 cut(s) 774
BstSFI CTRYAG 2 cut(s) 696, 805
BstUI CGCG 1 cut(s) 792
BstV1I GCAGC 3 cut(s) 175, 178, 469
BstV2I GAAGAC 1 cut(s) 848
BstX2I RGATCY 3 cut(s) 348, 441, 801
BstYI RGATCY 3 cut(s) 348, 441, 801
BsuRI GGCC 1 cut(s) 417
BtrI CACGTC 1 cut(s) 143
BtsCI GGATG 1 cut(s) 865
BtsIMutI CAGTG 1 cut(s) 67
BveI ACCTGC 1 cut(s) 884
Cac8I GCNNGC 2 cut(s) 48, 159
Cfr13I GGNCC 2 cut(s) 565, 787
Csp6I GTAC 1 cut(s) 330
CspCI CAANNNNNGTGG 2 cut(s) 364, 399
CviAII CATG 4 cut(s) 5, 256, 601, 719
CviJI RGCY 9 cut(s) 46, 157, 188, 278, 360, 417, 467, 688, 853
CviKI_1 RGCY 9 cut(s) 46, 157, 188, 278, 360, 417, 467, 688, 853
CviQI GTAC 1 cut(s) 330
DdeI CTNAG 1 cut(s) 51
DpnI GATC 6 cut(s) 350, 443, 501, 780, 803, 825
DpnII GATC 6 cut(s) 348, 441, 499, 778, 801, 823
Eco130I CCWWGG 1 cut(s) 300
Eco31I GGTCTC 1 cut(s) 857
Eco47I GGWCC 2 cut(s) 565, 787
Eco57I CTGAAG 1 cut(s) 590
EcoO109I RGGNCCY 1 cut(s) 565
EcoT14I CCWWGG 1 cut(s) 300
EcoT22I ATGCAT 2 cut(s) 6, 724
ErhI CCWWGG 1 cut(s) 300
FaeI CATG 4 cut(s) 8, 259, 604, 722
FalI AAGNNNNNCTT 2 cut(s) 297, 329
FatI CATG 4 cut(s) 4, 255, 600, 718
FauNDI CATATG 1 cut(s) 70
FbaI TGATCA 2 cut(s) 499, 823
Fnu4HI GCNGC 3 cut(s) 189, 192, 483
FokI GGATG 1 cut(s) 872
Fsp4HI GCNGC 3 cut(s) 189, 192, 483
FspBI CTAG 1 cut(s) 81
GluI GCNGC 3 cut(s) 189, 192, 483
HaeIII GGCC 1 cut(s) 417
HapII CCGG 1 cut(s) 776
Hin1II CATG 4 cut(s) 8, 259, 604, 722
HinfI GANTC 3 cut(s) 175, 399, 529
HpaII CCGG 1 cut(s) 776
HphI GGTGA 2 cut(s) 398, 847
Hpy166II GTNNAC 1 cut(s) 787
Hpy188I TCNGA 2 cut(s) 54, 765
Hpy188III TCNNGA 5 cut(s) 92, 200, 236, 568, 631
Hpy8I GTNNAC 1 cut(s) 787
HpyAV CCTTC 3 cut(s) 449, 607, 631
HpyCH4III ACNGT 1 cut(s) 62
HpyCH4IV ACGT 2 cut(s) 142, 593
HpyCH4V TGCA 5 cut(s) 4, 161, 194, 320, 722
HpyF10VI GCNNNNNNNGC 1 cut(s) 366
HpyF3I CTNAG 1 cut(s) 51
HpySE526I ACGT 2 cut(s) 142, 593
Hsp92II CATG 4 cut(s) 8, 259, 604, 722
Ksp22I TGATCA 2 cut(s) 499, 823
Kzo9I GATC 6 cut(s) 348, 441, 499, 778, 801, 823
LmnI GCTCC 1 cut(s) 43
Lsp1109I GCAGC 3 cut(s) 175, 178, 469
MaeI CTAG 1 cut(s) 81
MaeII ACGT 2 cut(s) 142, 593
MaeIII GTNAC 1 cut(s) 460
MalI GATC 6 cut(s) 350, 443, 501, 780, 803, 825
MboI GATC 6 cut(s) 348, 441, 499, 778, 801, 823
MboII GAAGA 6 cut(s) 317, 527, 646, 748, 850, 853
MflI RGATCY 3 cut(s) 348, 441, 801
MhlI GDGCHC 1 cut(s) 770
MluCI AATT 6 cut(s) 96, 195, 286, 711, 743, 752
MlyI GAGTC 2 cut(s) 169, 393
MmeI TCCRAC 2 cut(s) 320, 391
MnlI CCTC 5 cut(s) 407, 423, 426, 742, 883
Mph1103I ATGCAT 2 cut(s) 6, 724
MroXI GAANNNNTTC 2 cut(s) 309, 845
MseI TTAA 3 cut(s) 657, 798, 869
MspA1I CMGCKG 1 cut(s) 467
MspCI CTTAAG 1 cut(s) 868
MspI CCGG 1 cut(s) 776
MspR9I CCNGG 1 cut(s) 776
MvnI CGCG 1 cut(s) 792
MwoI GCNNNNNNNGC 1 cut(s) 366
NciI CCSGG 1 cut(s) 776
NdeI CATATG 1 cut(s) 70
NdeII GATC 6 cut(s) 348, 441, 499, 778, 801, 823
NlaIII CATG 4 cut(s) 8, 259, 604, 722
NlaIV GGNNCC 3 cut(s) 443, 566, 651
NsiI ATGCAT 2 cut(s) 6, 724
NspI RCATGY 1 cut(s) 722
PcsI WCGNNNNNNNCGW 1 cut(s) 627
PdmI GAANNNNTTC 2 cut(s) 309, 845
PfeI GAWTC 1 cut(s) 529
PflFI GACNNNGTC 1 cut(s) 563
PkrI GCNGC 3 cut(s) 190, 193, 484
PleI GAGTC 2 cut(s) 169, 393
PpsI GAGTC 2 cut(s) 169, 393
PpuMI RGGWCCY 1 cut(s) 565
Psp5II RGGWCCY 1 cut(s) 565
PspN4I GGNNCC 3 cut(s) 443, 566, 651
PspPI GGNCC 2 cut(s) 565, 787
PspPPI RGGWCCY 1 cut(s) 565
PsuI RGATCY 3 cut(s) 348, 441, 801
PsyI GACNNNGTC 1 cut(s) 563
PvuII CAGCTG 1 cut(s) 467
RsaI GTAC 1 cut(s) 331
RsaNI GTAC 1 cut(s) 330
SaqAI TTAA 3 cut(s) 657, 798, 869
SatI GCNGC 3 cut(s) 189, 192, 483
Sau3AI GATC 6 cut(s) 348, 441, 499, 778, 801, 823
Sau96I GGNCC 2 cut(s) 565, 787
SchI GAGTC 2 cut(s) 169, 393
ScrFI CCNGG 1 cut(s) 776
SduI GDGCHC 1 cut(s) 770
SfcI CTRYAG 2 cut(s) 696, 805
SinI GGWCC 2 cut(s) 565, 787
SmlI CTYRAG 1 cut(s) 868
SmoI CTYRAG 1 cut(s) 868
Sse9I AATT 6 cut(s) 96, 195, 286, 711, 743, 752
SsiI CCGC 1 cut(s) 790
SspMI CTAG 1 cut(s) 81
StyD4I CCNGG 1 cut(s) 774
StyI CCWWGG 1 cut(s) 300
TaaI ACNGT 1 cut(s) 62
TaiI ACGT 2 cut(s) 145, 596
TaqI TCGA 4 cut(s) 532, 621, 630, 888
TasI AATT 6 cut(s) 96, 195, 286, 711, 743, 752
TfiI GAWTC 1 cut(s) 529
Tru1I TTAA 3 cut(s) 657, 798, 869
Tru9I TTAA 3 cut(s) 657, 798, 869
TscAI CASTG 1 cut(s) 67
TseI GCWGC 3 cut(s) 188, 191, 482
TspDTI ATGAA 5 cut(s) 87, 237, 244, 534, 589
TspGWI ACGGA 1 cut(s) 889
TspRI CASTG 1 cut(s) 67
Tth111I GACNNNGTC 1 cut(s) 563
Vha464I CTTAAG 1 cut(s) 868
VpaK11BI GGWCC 2 cut(s) 565, 787
XapI RAATTY 1 cut(s) 743
XceI RCATGY 1 cut(s) 722
XcmI CCANNNNNNNNNTGG 1 cut(s) 253
XmnI GAANNNNTTC 2 cut(s) 309, 845
XspI CTAG 1 cut(s) 81
Zsp2I ATGCAT 2 cut(s) 6, 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.