FvH4_2g39020

Transmembrane and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0014677
Physical Location & Seq
Reverse (-)
28119261 .. 28123933
4673 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g39020.t1

Sequence Viewer

Length: 2166 bp
ATGAGAATCTTCTACGCTACATTAAAACCTCTAGTTCCGTTTGCTAATTCTAATCTATTGCGTTTTCGATGCTCTGTGACCTCTAAACCCGAAGCACCGCCGGTTATGGAGGCGAAGGTAGTACTAACTCAGACTCAGCGATACGCCGCTGGAGCGTTGTTCGCTCTGGCGCTTCACCAGACTCAGATCCACCAGACTAAGCCGTTGAATGCTTTGCTTCCTCTTGAGGAGGAGACGATCAATGACGGTGTCGGCATAGGTCGGACCGTTTCGGTTTCGGACGATCCCGGGCTTTGGATCCACGAGAGTTCTGGTTTGCTTTATCCTGTTCTCAGGTTTCTTGGAGTGGAGGACAAATCATGGAAGGGGCTGAAGGAAACTGCAGGATCTTCATCACAAGTTCGGCATCATGTAGGAGCGTTCTTGACCTTACTTAAGGAGGAGACAGCTGAGGTGGCTTCTGCTGAGAAATCCGAGAAGGAAGTTGCTCTGACAAAAACTGTTGATACCATGGTTCGTAGTGAGGAAAGTGCCGATGCTCATTTAGTGGATAGAAGTGAGAATTATGAATATGAAGCTAAATGTCGTGAAAAATTTTCCGATACTGAAACTGAAATAGCTTCTGAGGTCGCTGACAAGCCTTATGAGGCCCCAAAGAGGACCGTTTCTGTGATATCAACTGAAATAAAAGATCCAACTGAATCTAAACGCCTTGACGTGCCTGTTGAGGAGGGAAGGCGGCTCAGCTATGAGAAGAAAATAACAGTTCTTTATGTAATTTTGTCAGCCTGTGTGGCAGACAGTAGTGTAAGTGGCGATAAAGTAAGGAACGGTTATGATGCTCGACACCGCGTTGCACTGAGGTTGCTGGCAACTTGGCTTGGGGTGGAATGGCTAAAAGTGGAAGTTATGGAGACGATGGTTGCTTGTTCTTTCATGGCTTCCTTAAAAGAGAGTGCTAATGCAGAGAAGACAGAAGATGCTGATGGAGAGAAAAAAGAAAATGATGATATCTCATGGGAAAACTGGAAGCGTGGAGGTCTAATTGGTGCAGCTGCTTTAACAGGAGGAACTTTAATGGCTATCACCGGTGGTCTAGCTGCTCCTGCAATTGCTCAGGGATTGAGTGCTCTAGCTCCTATCTTGGGTGGCATTATTCCTGCAATAGGAGCAACTGGCTTCGCTGCTGCAGCAACTGCCGCAGGGTCTGTTACTGGTTCTGTTGCTGTTGCTGCATCATTTGGAGCTGCTGGAGCTGGACTAACCGGGACTAAAATGGCTAGAAGAATCGGCAACATTGAAGAATTTGAGTTCAAAGCAGTTGAAGGAACTTATAACCAAGGACGGCTAGGAGTGGGAATAGTGGTTTCAGGACTTGTGTTTGAGGATGAAGATTTTGTAAGGCCTTGGGAAGGCTACAATGACCACTTGGAGAGGTATGCACTGTGGTGGGAGTCTAAGAATTTGGTTGCATTGAGCACTGCAATCCAAGACTGGCTTACTTCAAGAATTGCCCTCGAGTTGATGAAAGAAGGTGCCATGCTGACCGTATTAAACACACTTGTAGCAGCTTTTGCTATGCCAGCAACCTTGGTTACTGCATCTGATCTTATTGATAGCAAATGGGCGATTGCAGCTGACAGATCAGATAAAGCTGGGAAGATGCTCGCTGAAGTATTGTTGAAGGGACTGCAAGGCAACAGGCCCGTGACTCTAATAGGATTCTCACTTGGGGGCAGAGTGGTTTTTAAATGTCTGGAATGTTTAGCTGAAGCAGAAGGGAACAACGCTGGTCTGGTAGAAAGGGTTGTCCTACTTGGAGCACCAGTGTCAATTGAAGATGAAAATTGGGAAGATGCCCGGAAGATGGTGGCAGGGAGATTTGTGAATGCTTTTTCTACAAATGATTGGACACTAGGAGTTGCCTTCCGTGCAAGTTTGCTATCTCAAGGTTTGGCTGGAATTCAAGCTGTCAATGTTCCTGGCATCGAAAATGTTGATGTAACACAATTTGTAGAAGGCCATTCATCCTATCTTTGGAAGACAAAACAGATCTTGGAGCTACTTGAACTTGAGTCTTACCACCCTGTTTTCAGAAAAGAAGACGCAGAAGATAAAACACCGCAGGAACAAAACAGCTCGGCTGACGAAAAGAAAACAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF726

Protein Analysis

722

Amino Acids

78.05

Weight (kDa)

5.09

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF726 PF05277 342 - 691 3.1e-92 Protein of unknown function (DUF726)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014677)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g39020 FvH4_2g39020
malus_domestica MD15G1017500.v1.1
prunus_persica Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1
pyrus_communis pycom15g01540
rosa_chinensis RchiOBHm_Chr6g0302121
rosa_laevigata RLG00000011193
rosa_multiflora Rmu_ssc0000160.1_g000011
rosa_roxburghii Rroxscaffold_7G00166060
rosa_rugosa Rorug06G0312400
rosa_samantha Rh6AG424800 Rh6BG477600 Rh6CG437700 Rh6DG424800
rosa_wichuraiana Rw6G036800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1335
AccB1I GGYRCC 1 cut(s) 1535
AccII CGCG 1 cut(s) 852
AciI CCGC 6 cut(s) 98, 147, 739, 850, 1200, 2123
AclWI GGATC 6 cut(s) 181, 278, 292, 305, 394, 686
AcsI RAATTY 4 cut(s) 593, 1304, 1462, 1962
AcuI CTGAAG 3 cut(s) 392, 1692, 1791
AfaI GTAC 1 cut(s) 123
AfiI CCNNNNNNNGG 7 cut(s) 294, 657, 1145, 1166, 1412, 1867, 2037
AflII CTTAAG 1 cut(s) 434
AgeI ACCGGT 1 cut(s) 1088
AgsI TTSAA 9 cut(s) 208, 1301, 1315, 1325, 1506, 1684, 1838, 1967, 2069
AjiI CACGTC 1 cut(s) 718
AjnI CCWGG 1 cut(s) 1981
AleI CACNNNNGTG 1 cut(s) 1447
Alw21I GWGCWC 3 cut(s) 1132, 1481, 1825
Alw26I GTCTC 3 cut(s) 227, 437, 908
AlwI GGATC 6 cut(s) 181, 278, 292, 305, 394, 686
AlwNI CAGNNNCTG 2 cut(s) 1196, 1208
Ama87I CYCGRG 2 cut(s) 287, 1517
AoxI GGCC 4 cut(s) 648, 1403, 1703, 2020
ApoI RAATTY 4 cut(s) 593, 1304, 1462, 1962
AsiGI ACCGGT 1 cut(s) 1088
AspLEI GCGC 1 cut(s) 172
AspS9I GGNCC 4 cut(s) 264, 649, 660, 1704
AsuC2I CCSGG 4 cut(s) 288, 289, 1267, 1861
AsuHPI GGTGA 2 cut(s) 167, 1078
AvaI CYCGRG 2 cut(s) 287, 1517
AvaII GGWCC 2 cut(s) 264, 660
BaeI ACNNNNGTAYC 2 cut(s) 498, 531
BamHI GGATCC 1 cut(s) 297
BanI GGYRCC 1 cut(s) 1535
BauI CACGAG 1 cut(s) 302
BbsI GAAGAC 3 cut(s) 977, 2048, 2109
Bbv12I GWGCWC 3 cut(s) 1132, 1481, 1825
BbvCI CCTCAGC 1 cut(s) 450
BccI CCATC 3 cut(s) 913, 980, 1861
BceAI ACGGC 2 cut(s) 187, 1361
BciT130I CCWGG 1 cut(s) 1983
BcnI CCSGG 4 cut(s) 288, 289, 1267, 1861
BcoDI GTCTC 3 cut(s) 227, 437, 908
BfaI CTAG 6 cut(s) 32, 1097, 1133, 1281, 1349, 1916
BfmI CTRYAG 2 cut(s) 381, 1188
BfoI RGCGCY 1 cut(s) 173
BfrI CTTAAG 1 cut(s) 434
BglI GCCNNNNNGGC 1 cut(s) 794
BglII AGATCT 1 cut(s) 2052
BlpI GCTNAGC 1 cut(s) 743
BmcAI AGTACT 1 cut(s) 123
Bme1390I CCNGG 5 cut(s) 288, 289, 1267, 1861, 1983
Bme18I GGWCC 2 cut(s) 264, 660
BmeT110I CYCGRG 2 cut(s) 287, 1517
BmgBI CACGTC 1 cut(s) 718
BmgT120I GGNCC 4 cut(s) 264, 649, 660, 1704
BmiI GGNNCC 3 cut(s) 299, 651, 1537
BmrFI CCNGG 5 cut(s) 288, 289, 1267, 1861, 1983
BpiI GAAGAC 3 cut(s) 977, 2048, 2109
BpmI CTGGAG 2 cut(s) 171, 1272
Bpu10I CCTNAGC 2 cut(s) 450, 1116
Bpu1102I GCTNAGC 1 cut(s) 743
BpuEI CTTGAG 3 cut(s) 245, 1932, 2093
BpuMI CCSGG 4 cut(s) 288, 289, 1267, 1861
BsaBI GATNNNNATC 1 cut(s) 391
BsaJI CCNNGG 5 cut(s) 287, 510, 1339, 1406, 1590
BsaWI WCCGGW 1 cut(s) 1088
BsaXI ACNNNNNCTCC 2 cut(s) 1812, 1842
Bsc4I CCNNNNNNNGG 7 cut(s) 294, 657, 1145, 1166, 1412, 1867, 2037
Bse118I RCCGGY 2 cut(s) 100, 1088
Bse1I ACTGG 5 cut(s) 1031, 1180, 1219, 1499, 1826
Bse8I GATNNNNATC 1 cut(s) 391
BseBI CCWGG 1 cut(s) 1983
BseDI CCNNGG 5 cut(s) 287, 510, 1339, 1406, 1590
BseGI GGATG 2 cut(s) 1393, 2027
BseJI GATNNNNATC 1 cut(s) 391
BseLI CCNNNNNNNGG 7 cut(s) 294, 657, 1145, 1166, 1412, 1867, 2037
BseNI ACTGG 5 cut(s) 1031, 1180, 1219, 1499, 1826
BseRI GAGGAG 4 cut(s) 242, 245, 455, 743
BseYI CCCAGC 1 cut(s) 1655
BsgI GTGCAG 1 cut(s) 1071
Bsh1236I CGCG 1 cut(s) 852
BshFI GGCC 4 cut(s) 650, 1405, 1705, 2022
BshNI GGYRCC 1 cut(s) 1535
BshTI ACCGGT 1 cut(s) 1088
BsiHKAI GWGCWC 3 cut(s) 1132, 1481, 1825
BsiHKCI CYCGRG 2 cut(s) 287, 1517
BsiSI CCGG 5 cut(s) 101, 288, 1089, 1266, 1861
BslFI GGGAC 2 cut(s) 1282, 1701
BslI CCNNNNNNNGG 7 cut(s) 294, 657, 1145, 1166, 1412, 1867, 2037
BsmAI GTCTC 3 cut(s) 227, 437, 908
BsmBI CGTCTC 2 cut(s) 227, 908
BsmFI GGGAC 2 cut(s) 1282, 1701
BsmI GAATGC 2 cut(s) 214, 1894
BsnI GGCC 4 cut(s) 650, 1405, 1705, 2022
BsoBI CYCGRG 2 cut(s) 287, 1517
Bsp1286I GDGCHC 3 cut(s) 1132, 1481, 1825
Bsp143I GATC 9 cut(s) 186, 237, 283, 297, 386, 691, 1606, 1643, 2052
Bsp1720I GCTNAGC 1 cut(s) 743
Bsp19I CCATGG 1 cut(s) 510
BspACI CCGC 6 cut(s) 98, 147, 739, 850, 1200, 2123
BspANI GGCC 4 cut(s) 650, 1405, 1705, 2022
BspFNI CGCG 1 cut(s) 852
BspLI GGNNCC 3 cut(s) 299, 651, 1537
BspMAI CTGCAG 2 cut(s) 385, 1192
BspPI GGATC 6 cut(s) 181, 278, 292, 305, 394, 686
BspT107I GGYRCC 1 cut(s) 1535
BspTI CTTAAG 1 cut(s) 434
BsrFI RCCGGY 2 cut(s) 100, 1088
BsrI ACTGG 5 cut(s) 1031, 1180, 1219, 1499, 1826
BssAI RCCGGY 2 cut(s) 100, 1088
BssECI CCNNGG 5 cut(s) 287, 510, 1339, 1406, 1590
BssMI GATC 9 cut(s) 186, 237, 283, 297, 386, 691, 1606, 1643, 2052
BssSI CACGAG 1 cut(s) 302
BssT1I CCWWGG 4 cut(s) 510, 1339, 1406, 1590
Bst2BI CACGAG 1 cut(s) 302
Bst2UI CCWGG 1 cut(s) 1983
Bst4CI ACNGT 9 cut(s) 248, 268, 502, 664, 766, 803, 833, 1446, 1549
BstAFI CTTAAG 1 cut(s) 434
BstAPI GCANNNNNTGC 2 cut(s) 1196, 1574
BstC8I GCNNGC 3 cut(s) 870, 1584, 1668
BstDSI CCRYGG 1 cut(s) 510
BstENI CCTNNNNNAGG 2 cut(s) 1164, 1410
BstF5I GGATG 2 cut(s) 1393, 2027
BstFNI CGCG 1 cut(s) 852
BstH2I RGCGCY 1 cut(s) 173
BstHHI GCGC 1 cut(s) 172
BstKTI GATC 9 cut(s) 189, 240, 286, 300, 389, 694, 1609, 1646, 2055
BstMAI GTCTC 3 cut(s) 227, 437, 908
BstMBI GATC 9 cut(s) 186, 237, 283, 297, 386, 691, 1606, 1643, 2052
BstNI CCWGG 1 cut(s) 1983
BstSCI CCNGG 5 cut(s) 286, 287, 1265, 1859, 1981
BstSFI CTRYAG 2 cut(s) 381, 1188
BstUI CGCG 1 cut(s) 852
BstV2I GAAGAC 3 cut(s) 977, 2048, 2109
BstX2I RGATCY 5 cut(s) 186, 297, 386, 691, 2052
BstYI RGATCY 5 cut(s) 186, 297, 386, 691, 2052
BsuRI GGCC 4 cut(s) 650, 1405, 1705, 2022
BtgI CCRYGG 1 cut(s) 510
BtrI CACGTC 1 cut(s) 718
BtsCI GGATG 2 cut(s) 1393, 2027
BtsI GCAGTG 1 cut(s) 1479
BtsIMutI CAGTG 4 cut(s) 857, 1442, 1479, 1833
Cac8I GCNNGC 3 cut(s) 870, 1584, 1668
CaiI CAGNNNCTG 2 cut(s) 1196, 1208
CfoI GCGC 1 cut(s) 172
Cfr10I RCCGGY 2 cut(s) 100, 1088
Cfr13I GGNCC 4 cut(s) 264, 649, 660, 1704
Cfr9I CCCGGG 1 cut(s) 287
CpoI CGGWCCG 1 cut(s) 264
CseI GACGC 1 cut(s) 2114
Csp6I GTAC 1 cut(s) 122
CspAI ACCGGT 1 cut(s) 1088
CspI CGGWCCG 1 cut(s) 264
CviAII CATG 6 cut(s) 360, 410, 511, 937, 1017, 1540
CviQI GTAC 1 cut(s) 122
DpnI GATC 9 cut(s) 188, 239, 285, 299, 388, 693, 1608, 1645, 2054
DpnII GATC 9 cut(s) 186, 237, 283, 297, 386, 691, 1606, 1643, 2052
DraI TTTAAA 1 cut(s) 1750
Eco130I CCWWGG 4 cut(s) 510, 1339, 1406, 1590
Eco147I AGGCCT 1 cut(s) 1405
Eco32I GATATC 2 cut(s) 675, 1012
Eco47I GGWCC 2 cut(s) 264, 660
Eco57I CTGAAG 3 cut(s) 392, 1692, 1791
Eco88I CYCGRG 2 cut(s) 287, 1517
EcoNI CCTNNNNNAGG 2 cut(s) 1164, 1410
EcoO109I RGGNCCY 1 cut(s) 649
EcoRI GAATTC 1 cut(s) 1962
EcoRII CCWGG 1 cut(s) 1981
EcoRV GATATC 2 cut(s) 675, 1012
EcoT14I CCWWGG 4 cut(s) 510, 1339, 1406, 1590
ErhI CCWWGG 4 cut(s) 510, 1339, 1406, 1590
Esp3I CGTCTC 2 cut(s) 227, 908
FaeI CATG 6 cut(s) 363, 413, 514, 940, 1020, 1543
FalI AAGNNNNNCTT 2 cut(s) 1482, 1514
FaqI GGGAC 2 cut(s) 1282, 1701
FatI CATG 6 cut(s) 359, 409, 510, 936, 1016, 1539
FokI GGATG 2 cut(s) 1400, 2014
FspBI CTAG 6 cut(s) 32, 1097, 1133, 1281, 1349, 1916
GlaI GCGC 1 cut(s) 171
GsaI CCCAGC 1 cut(s) 1659
GsuI CTGGAG 2 cut(s) 171, 1272
HaeII RGCGCY 1 cut(s) 173
HaeIII GGCC 4 cut(s) 650, 1405, 1705, 2022
HapII CCGG 5 cut(s) 101, 288, 1089, 1266, 1861
HgaI GACGC 1 cut(s) 2114
HhaI GCGC 1 cut(s) 172
Hin1II CATG 6 cut(s) 363, 413, 514, 940, 1020, 1543
Hin6I GCGC 1 cut(s) 170
HinP1I GCGC 1 cut(s) 170
HinfI GANTC 9 cut(s) 6, 133, 181, 701, 1287, 1454, 1711, 1722, 2075
HpaII CCGG 5 cut(s) 101, 288, 1089, 1266, 1861
HphI GGTGA 2 cut(s) 167, 1078
Hpy188III TCNNGA 6 cut(s) 224, 424, 587, 1371, 1506, 1757
HpyCH4III ACNGT 9 cut(s) 248, 268, 502, 664, 766, 803, 833, 1446, 1549
HpyCH4IV ACGT 1 cut(s) 717
HpySE526I ACGT 1 cut(s) 717
Hsp92II CATG 6 cut(s) 363, 413, 514, 940, 1020, 1543
HspAI GCGC 1 cut(s) 170
Kzo9I GATC 9 cut(s) 186, 237, 283, 297, 386, 691, 1606, 1643, 2052
LmnI GCTCC 9 cut(s) 152, 416, 1108, 1141, 1169, 1244, 1253, 1820, 2059
MaeI CTAG 6 cut(s) 32, 1097, 1133, 1281, 1349, 1916
MaeII ACGT 1 cut(s) 717
MaeIII GTNAC 5 cut(s) 76, 1210, 1594, 1708, 2002
MalI GATC 9 cut(s) 188, 239, 285, 299, 388, 693, 1608, 1645, 2054
MboI GATC 9 cut(s) 186, 237, 283, 297, 386, 691, 1606, 1643, 2052
MfeI CAATTG 2 cut(s) 1110, 1833
MflI RGATCY 5 cut(s) 186, 297, 386, 691, 2052
MhlI GDGCHC 3 cut(s) 1132, 1481, 1825
MlyI GAGTC 5 cut(s) 127, 175, 1463, 1705, 2084
MmeI TCCRAC 2 cut(s) 242, 719
MseI TTAA 7 cut(s) 23, 435, 947, 1061, 1076, 1553, 1749
MslI CAYNNNNRTG 1 cut(s) 1447
MspA1I CMGCKG 4 cut(s) 149, 449, 1055, 1637
MspCI CTTAAG 1 cut(s) 434
MspI CCGG 5 cut(s) 101, 288, 1089, 1266, 1861
MspR9I CCNGG 5 cut(s) 288, 289, 1267, 1861, 1983
MunI CAATTG 2 cut(s) 1110, 1833
Mva1269I GAATGC 2 cut(s) 214, 1894
MvaI CCWGG 1 cut(s) 1983
MvnI CGCG 1 cut(s) 852
NciI CCSGG 4 cut(s) 288, 289, 1267, 1861
NcoI CCATGG 1 cut(s) 510
NdeII GATC 9 cut(s) 186, 237, 283, 297, 386, 691, 1606, 1643, 2052
NlaIII CATG 6 cut(s) 363, 413, 514, 940, 1020, 1543
NlaIV GGNNCC 3 cut(s) 299, 651, 1537
NmeAIII GCCGAG 1 cut(s) 2120
NmuCI GTSAC 2 cut(s) 76, 1708
OliI CACNNNNGTG 1 cut(s) 1447
PaeR7I CTCGAG 1 cut(s) 1517
PceI AGGCCT 1 cut(s) 1405
PctI GAATGC 2 cut(s) 214, 1894
PfeI GAWTC 4 cut(s) 6, 701, 1287, 1722
PflFI GACNNNGTC 1 cut(s) 248
PinAI ACCGGT 1 cut(s) 1088
PleI GAGTC 5 cut(s) 127, 175, 1462, 1705, 2083
PpsI GAGTC 5 cut(s) 127, 175, 1462, 1705, 2083
PsiI TTATAA 1 cut(s) 1335
Psp6I CCWGG 1 cut(s) 1981
PspFI CCCAGC 1 cut(s) 1655
PspGI CCWGG 1 cut(s) 1981
PspN4I GGNNCC 3 cut(s) 299, 651, 1537
PspPI GGNCC 4 cut(s) 264, 649, 660, 1704
PspXI VCTCGAGB 1 cut(s) 1517
PstI CTGCAG 2 cut(s) 385, 1192
PstNI CAGNNNCTG 2 cut(s) 1196, 1208
PsuI RGATCY 5 cut(s) 186, 297, 386, 691, 2052
PsyI GACNNNGTC 1 cut(s) 248
PvuII CAGCTG 3 cut(s) 449, 1055, 1637
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
RseI CAYNNNNRTG 1 cut(s) 1447
Rsr2I CGGWCCG 1 cut(s) 264
RsrII CGGWCCG 1 cut(s) 264
SaqAI TTAA 7 cut(s) 23, 435, 947, 1061, 1076, 1553, 1749
Sau3AI GATC 9 cut(s) 186, 237, 283, 297, 386, 691, 1606, 1643, 2052
Sau96I GGNCC 4 cut(s) 264, 649, 660, 1704
ScaI AGTACT 1 cut(s) 123
SchI GAGTC 5 cut(s) 127, 175, 1463, 1705, 2084
ScrFI CCNGG 5 cut(s) 288, 289, 1267, 1861, 1983
SduI GDGCHC 3 cut(s) 1132, 1481, 1825
SfcI CTRYAG 2 cut(s) 381, 1188
Sfr274I CTCGAG 1 cut(s) 1517
SgrAI CRCCGGYG 1 cut(s) 1088
SinI GGWCC 2 cut(s) 264, 660
SlaI CTCGAG 1 cut(s) 1517
SmaI CCCGGG 1 cut(s) 289
SmiMI CAYNNNNRTG 1 cut(s) 1447
SmlI CTYRAG 5 cut(s) 224, 434, 1517, 1947, 2072
SmoI CTYRAG 5 cut(s) 224, 434, 1517, 1947, 2072
SseBI AGGCCT 1 cut(s) 1405
SsiI CCGC 6 cut(s) 98, 147, 739, 850, 1200, 2123
SspMI CTAG 6 cut(s) 32, 1097, 1133, 1281, 1349, 1916
StuI AGGCCT 1 cut(s) 1405
StyD4I CCNGG 5 cut(s) 286, 287, 1265, 1859, 1981
StyI CCWWGG 4 cut(s) 510, 1339, 1406, 1590
TaaI ACNGT 9 cut(s) 248, 268, 502, 664, 766, 803, 833, 1446, 1549
TaiI ACGT 1 cut(s) 720
TaqI TCGA 4 cut(s) 67, 844, 1518, 1989
TatI WGTACW 1 cut(s) 121
TauI GCSGC 3 cut(s) 149, 742, 1202
TfiI GAWTC 4 cut(s) 6, 701, 1287, 1722
Tru1I TTAA 7 cut(s) 23, 435, 947, 1061, 1076, 1553, 1749
Tru9I TTAA 7 cut(s) 23, 435, 947, 1061, 1076, 1553, 1749
TscAI CASTG 4 cut(s) 864, 1449, 1486, 1833
TseFI GTSAC 2 cut(s) 76, 1708
Tsp45I GTSAC 2 cut(s) 76, 1708
TspDTI ATGAA 8 cut(s) 381, 582, 588, 925, 1404, 1541, 1857, 2016
TspGWI ACGGA 2 cut(s) 27, 1919
TspMI CCCGGG 1 cut(s) 287
TspRI CASTG 4 cut(s) 864, 1449, 1486, 1833
Tth111I GACNNNGTC 1 cut(s) 248
Vha464I CTTAAG 1 cut(s) 434
VpaK11BI GGWCC 2 cut(s) 264, 660
XagI CCTNNNNNAGG 2 cut(s) 1164, 1410
XapI RAATTY 4 cut(s) 593, 1304, 1462, 1962
XcmI CCANNNNNNNNNTGG 1 cut(s) 308
XhoI CTCGAG 1 cut(s) 1517
XmaI CCCGGG 1 cut(s) 287
XspI CTAG 6 cut(s) 32, 1097, 1133, 1281, 1349, 1916
ZrmI AGTACT 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.