Rh6DG424800

Transmembrane and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0014677
Physical Location & Seq
Reverse (-)
60581366 .. 60588187
6822 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG424800.1

Sequence Viewer

Length: 2160 bp
ATGAAAATCTATAGGTTCGCTAAATTGAAACCCCTACTTCCGTTACCGAATTCTAACCTCTGGCGTTTTCGATGCTCTGTGACCGTTAAACCAGAAGCAGCGCCGGTTATGGAGGCCAAGGTAGTACTCACACAGACTCAGAGATACGCCGCCGGAGCTCTGTTTGCGCTGGCGCTTCGCCAGACTCAGATCCACCAGACTCAGCCGTTGAATGCTTTGCTCCCTCTTGAGGAGGAGACTATCGGGGATGGTGCCAGTGCTGCTGGCAGGACCATTTCGGTTTCGGATGATCCCGGCATTTGGATCCACGAGAGTTCTGGTTTGCTTTATCCTGTTCTCAGGTTTCTAGGAGTGGAGGACAAATCGTGGAAGGGGCTGAAGGAAACTGCAGGATCTTCTTCACAAGTTAGGCATCATGTAGGAGCGTTCTTGACCTTACTAAAGGAGGGAGCTGATGAGGTGGCTTCTGCTGAGAAAACTGAGAAGGAAGTTGCTCTGACAAAAACTGTTGATACCATGGTTCGTAGTGAGGAAAGCGCCGATGCTCATGCAGTGGATAGGAGTGAGAATTATGAATATGAAGCTAAATGTCGTGAAAAGTTTTCCAATACTGAAACGGAAATAGCGTCTGAGGTCTCTGACAAGGCTTATGAGGCCCCAAAGAGGACAGTTTCTGTGATATCCACTGAAATAAAAGATCCAAATGAATCTAAACGCCTTGAGGTGCCTGTTGAAGAAGGAAGGCGGCTCGGTTATGAGAAGAAAATAACAGTTCTTTATGCAATTCTGTCAGCCTGTGTGGCAGACAATAGTGAAAGTGGCGATAAAGTAAGGAACGGTTATGATGCTCGACACCGCGTCGCATTGAGGTTGCTGGCAACTTGGCTTGGGGTTGAATGGCTGAAAGTGGAAGTTATGGAGACGATGGTTGCTTGTTCTTTCATGGCTTCGTTAAAAGAGGTTGCTAATAAAGAGAAGACAGAAGGTGTTGATGGAGAGAAAAAACAAAATGATGATACCTCAGTGGAAAAATGGAAACGGGGAGGACTAATTGGTGCAGCTGCTTTAACAGGAGGAACTTTGATGGCTATCACTGGTGGTCTAGCTGCTCCTGCAATTGCGCAGGGATTGAGTGCTCTAGCTCCTGTATTGGGTGGCATTGTTCCTGCAATAGGAGCAACTGGCTTCGCTGCTGCAGCAACTGCCACGGGGTCTGTTACTGGTTCTCTTGCTGTTGCTGCATCATTTGGAGCTGCTGGGGCTGGACTTACGGGAACTAAAATGGCTAGAAGAATCGGCAACATTGAAGAATTTGAGTTCAAAGCAGTTGAAGGAACTTATAACCAAGGACGGCTAGCAGTGGGAATAGTGGTTTCAGGACTTGTTTTTGAGGATGAAGATTTTATGAGGCCTTGGGAAGGCTACAATGACCACTTGGAGAGGTATGCACTGTGGTGGGAGTCTAAGAATTTGGTTGCATTGAGCACTGCAATTCAAGACTGGCTTACTTCAAGAATTGCCCTCGAGTTGATGAAAGAAGGTGCCATGCTGACTGTATTAAACACACTAGTAGCAGCGTTCGCTATGCCAGCAACCTTGGTTACTGCATCTGATCTTATAGATAGCAAATGGGCGATTGCAGTTGACAGATCAGATAAAGCTGGGAAGATGCTTGCTGAAGTATTGTTGAAGGGACTGCAAGGCAACAGGCCTGTGACGCTCATAGGATTCTCACTTGGGGGCAGAGTGATTTTTAAATGTCTAGAATGTTTAGCTGAATCAGAAGGGAACAATGCTGGTCTGGTAGAAAGGGTTGTCCTGCTTGGAGCACCAGTGTCAATTGAAGATGAAAATTGGGAAGATGCACGGAAGATGGTGGCAGGGAGATTTGTGAATGCTTTTTCTACAAATGATTGGACACTAGGAGTTGCCTTTCGTGCAAGTTTGCTATCTCAAGGTTTGGCTGGAATTCAAGCTGTCAATGTTCCTGGCATCGAAAATGTTGATGTAACGCAATTTGTAGAAGGCCACTCATCCTATCTTTGGAAGACGAAACAGATCTTGGAGCTGCTTGAACTTGAGTCTTACTACCCTGTTTTCAGAAAAGAAAATACAGAAGATAACACACCCCAGGAACAAAACCGCTCGGCTGGCACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF726

Protein Analysis

719

Amino Acids

77.83

Weight (kDa)

5.27

Isoelectric Point (pI)

36.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF726 PF05277 344 - 693 1.5e-93 Protein of unknown function (DUF726)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014677)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g39020 FvH4_2g39020
malus_domestica MD15G1017500.v1.1
prunus_persica Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1
pyrus_communis pycom15g01540
rosa_chinensis RchiOBHm_Chr6g0302121
rosa_laevigata RLG00000011193
rosa_multiflora Rmu_ssc0000160.1_g000011
rosa_roxburghii Rroxscaffold_7G00166060
rosa_rugosa Rorug06G0312400
rosa_samantha Rh6AG424800 Rh6BG477600 Rh6CG437700 Rh6DG424800
rosa_wichuraiana Rw6G036800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1341
Acc16I TGCGCA 1 cut(s) 1122
AccB1I GGYRCC 3 cut(s) 251, 724, 1541
AccBSI CCGCTC 1 cut(s) 2145
AccII CGCG 1 cut(s) 858
AciI CCGC 4 cut(s) 150, 745, 856, 2143
AclWI GGATC 6 cut(s) 184, 284, 298, 311, 400, 692
AcsI RAATTY 4 cut(s) 49, 1310, 1468, 1968
AcuI CTGAAG 2 cut(s) 398, 1698
AfaI GTAC 1 cut(s) 126
AfiI CCNNNNNNNGG 7 cut(s) 229, 300, 663, 1151, 1172, 1418, 2043
AhdI GACNNNNNGTC 1 cut(s) 857
AhlI ACTAGT 1 cut(s) 1567
AjnI CCWGG 2 cut(s) 1987, 2130
AjuI GAANNNNNNNTTGG 2 cut(s) 2045, 2077
AleI CACNNNNGTG 1 cut(s) 1453
Alw21I GWGCWC 4 cut(s) 160, 1138, 1487, 1831
Alw26I GTCTC 3 cut(s) 230, 640, 914
AlwI GGATC 6 cut(s) 184, 284, 298, 311, 400, 692
AlwNI CAGNNNCTG 2 cut(s) 674, 1202
Ama87I CYCGRG 1 cut(s) 1523
AoxI GGCC 5 cut(s) 114, 654, 1409, 1709, 2026
ApoI RAATTY 4 cut(s) 49, 1310, 1468, 1968
AspLEI GCGC 5 cut(s) 103, 169, 175, 539, 1123
AspS9I GGNCC 2 cut(s) 270, 655
AsuC2I CCSGG 1 cut(s) 294
AsuNHI GCTAGC 1 cut(s) 1354
AvaI CYCGRG 1 cut(s) 1523
AvaII GGWCC 1 cut(s) 270
BaeI ACNNNNGTAYC 4 cut(s) 504, 537, 1008, 1041
BamHI GGATCC 1 cut(s) 303
BanI GGYRCC 3 cut(s) 251, 724, 1541
BanII GRGCYC 1 cut(s) 160
BauI CACGAG 1 cut(s) 308
BbsI GAAGAC 2 cut(s) 983, 2054
Bbv12I GWGCWC 4 cut(s) 160, 1138, 1487, 1831
BccI CCATC 5 cut(s) 242, 919, 986, 1078, 1867
BceAI ACGGC 2 cut(s) 190, 1367
BcgI CGANNNNNNTGC 2 cut(s) 530, 564
BciT130I CCWGG 2 cut(s) 1989, 2132
BcnI CCSGG 1 cut(s) 294
BcoDI GTCTC 3 cut(s) 230, 640, 914
BcuI ACTAGT 1 cut(s) 1567
BfaI CTAG 8 cut(s) 347, 1103, 1139, 1287, 1355, 1568, 1763, 1922
BfmI CTRYAG 3 cut(s) 10, 387, 1194
BfoI RGCGCY 3 cut(s) 104, 176, 540
BglI GCCNNNNNGGC 1 cut(s) 800
BglII AGATCT 1 cut(s) 2058
BmcAI AGTACT 1 cut(s) 126
Bme1390I CCNGG 3 cut(s) 294, 1989, 2132
Bme18I GGWCC 1 cut(s) 270
BmeRI GACNNNNNGTC 1 cut(s) 857
BmeT110I CYCGRG 1 cut(s) 1523
BmgT120I GGNCC 2 cut(s) 270, 655
BmiI GGNNCC 5 cut(s) 253, 305, 657, 726, 1543
BmrFI CCNGG 3 cut(s) 294, 1989, 2132
BmsI GCATC 9 cut(s) 62, 421, 532, 835, 1250, 1616, 1659, 1852, 2001
BmtI GCTAGC 1 cut(s) 1358
BpiI GAAGAC 2 cut(s) 983, 2054
BpuEI CTTGAG 4 cut(s) 248, 740, 1938, 2099
BpuMI CCSGG 1 cut(s) 294
BsaBI GATNNNNATC 1 cut(s) 1088
BsaI GGTCTC 1 cut(s) 640
BsaJI CCNNGG 7 cut(s) 117, 516, 1206, 1345, 1412, 1596, 2130
BsaXI ACNNNNNCTCC 2 cut(s) 1818, 1848
Bsc4I CCNNNNNNNGG 7 cut(s) 229, 300, 663, 1151, 1172, 1418, 2043
Bse118I RCCGGY 1 cut(s) 103
Bse1I ACTGG 6 cut(s) 255, 1099, 1186, 1225, 1505, 1832
Bse8I GATNNNNATC 1 cut(s) 1088
BseBI CCWGG 2 cut(s) 1989, 2132
BseDI CCNNGG 7 cut(s) 117, 516, 1206, 1345, 1412, 1596, 2130
BseGI GGATG 4 cut(s) 253, 292, 1399, 2033
BseJI GATNNNNATC 1 cut(s) 1088
BseLI CCNNNNNNNGG 7 cut(s) 229, 300, 663, 1151, 1172, 1418, 2043
BseMII CTCAG 8 cut(s) 152, 200, 215, 352, 462, 471, 621, 1035
BseNI ACTGG 6 cut(s) 255, 1099, 1186, 1225, 1505, 1832
BseRI GAGGAG 2 cut(s) 245, 248
BseYI CCCAGC 2 cut(s) 1256, 1661
BsgI GTGCAG 1 cut(s) 1077
Bsh1236I CGCG 1 cut(s) 858
BshFI GGCC 5 cut(s) 116, 656, 1411, 1711, 2028
BshNI GGYRCC 3 cut(s) 251, 724, 1541
BsiHKAI GWGCWC 4 cut(s) 160, 1138, 1487, 1831
BsiHKCI CYCGRG 1 cut(s) 1523
BsiSI CCGG 3 cut(s) 104, 153, 294
BslFI GGGAC 1 cut(s) 1707
BslI CCNNNNNNNGG 7 cut(s) 229, 300, 663, 1151, 1172, 1418, 2043
BsmAI GTCTC 3 cut(s) 230, 640, 914
BsmBI CGTCTC 1 cut(s) 914
BsmFI GGGAC 1 cut(s) 1707
BsmI GAATGC 2 cut(s) 217, 1900
BsnI GGCC 5 cut(s) 116, 656, 1411, 1711, 2028
Bso31I GGTCTC 1 cut(s) 640
BsoBI CYCGRG 1 cut(s) 1523
Bsp1286I GDGCHC 4 cut(s) 160, 1138, 1487, 1831
Bsp143I GATC 8 cut(s) 189, 289, 303, 392, 697, 1612, 1649, 2058
Bsp19I CCATGG 1 cut(s) 516
BspACI CCGC 4 cut(s) 150, 745, 856, 2143
BspANI GGCC 5 cut(s) 116, 656, 1411, 1711, 2028
BspCNI CTCAG 8 cut(s) 151, 199, 214, 351, 463, 472, 622, 1034
BspFNI CGCG 1 cut(s) 858
BspLI GGNNCC 5 cut(s) 253, 305, 657, 726, 1543
BspMAI CTGCAG 2 cut(s) 391, 1198
BspOI GCTAGC 1 cut(s) 1358
BspPI GGATC 6 cut(s) 184, 284, 298, 311, 400, 692
BspT107I GGYRCC 3 cut(s) 251, 724, 1541
BspTNI GGTCTC 1 cut(s) 640
BsrBI CCGCTC 1 cut(s) 2145
BsrFI RCCGGY 1 cut(s) 103
BsrI ACTGG 6 cut(s) 255, 1099, 1186, 1225, 1505, 1832
BssAI RCCGGY 1 cut(s) 103
BssECI CCNNGG 7 cut(s) 117, 516, 1206, 1345, 1412, 1596, 2130
BssMI GATC 8 cut(s) 189, 289, 303, 392, 697, 1612, 1649, 2058
BssSI CACGAG 1 cut(s) 308
BssT1I CCWWGG 5 cut(s) 117, 516, 1345, 1412, 1596
Bst2BI CACGAG 1 cut(s) 308
Bst2UI CCWGG 2 cut(s) 1989, 2132
Bst4CI ACNGT 7 cut(s) 85, 508, 670, 772, 839, 1452, 1555
BstAPI GCANNNNNTGC 1 cut(s) 1202
BstC8I GCNNGC 7 cut(s) 171, 265, 876, 1356, 1590, 1674, 2152
BstDEI CTNAG 9 cut(s) 138, 186, 201, 338, 471, 480, 630, 1021, 1464
BstDSI CCRYGG 2 cut(s) 516, 1206
BstENI CCTNNNNNAGG 2 cut(s) 1170, 1416
BstF5I GGATG 4 cut(s) 253, 292, 1399, 2033
BstFNI CGCG 1 cut(s) 858
BstH2I RGCGCY 3 cut(s) 104, 176, 540
BstHHI GCGC 5 cut(s) 103, 169, 175, 539, 1123
BstKTI GATC 8 cut(s) 192, 292, 306, 395, 700, 1615, 1652, 2061
BstMAI GTCTC 3 cut(s) 230, 640, 914
BstMBI GATC 8 cut(s) 189, 289, 303, 392, 697, 1612, 1649, 2058
BstNI CCWGG 2 cut(s) 1989, 2132
BstSCI CCNGG 3 cut(s) 292, 1987, 2130
BstSFI CTRYAG 3 cut(s) 10, 387, 1194
BstUI CGCG 1 cut(s) 858
BstV2I GAAGAC 2 cut(s) 983, 2054
BstX2I RGATCY 5 cut(s) 189, 303, 392, 697, 2058
BstYI RGATCY 5 cut(s) 189, 303, 392, 697, 2058
BsuRI GGCC 5 cut(s) 116, 656, 1411, 1711, 2028
BtgI CCRYGG 2 cut(s) 516, 1206
BtsCI GGATG 4 cut(s) 253, 292, 1399, 2033
BtsI GCAGTG 3 cut(s) 558, 1365, 1485
BtsIMutI CAGTG 9 cut(s) 262, 558, 684, 1029, 1092, 1365, 1448, 1485, 1839
Cac8I GCNNGC 7 cut(s) 171, 265, 876, 1356, 1590, 1674, 2152
CaiI CAGNNNCTG 2 cut(s) 674, 1202
CfoI GCGC 5 cut(s) 103, 169, 175, 539, 1123
Cfr10I RCCGGY 1 cut(s) 103
Cfr13I GGNCC 2 cut(s) 270, 655
CseI GACGC 3 cut(s) 615, 847, 1726
Csp6I GTAC 1 cut(s) 125
CviAII CATG 5 cut(s) 416, 517, 548, 943, 1546
CviQI GTAC 1 cut(s) 125
DdeI CTNAG 9 cut(s) 138, 186, 201, 338, 471, 480, 630, 1021, 1464
DpnI GATC 8 cut(s) 191, 291, 305, 394, 699, 1614, 1651, 2060
DpnII GATC 8 cut(s) 189, 289, 303, 392, 697, 1612, 1649, 2058
DraI TTTAAA 1 cut(s) 1756
DriI GACNNNNNGTC 1 cut(s) 857
Eam1105I GACNNNNNGTC 1 cut(s) 857
Ecl136II GAGCTC 1 cut(s) 158
Eco130I CCWWGG 5 cut(s) 117, 516, 1345, 1412, 1596
Eco147I AGGCCT 2 cut(s) 1411, 1711
Eco24I GRGCYC 1 cut(s) 160
Eco31I GGTCTC 1 cut(s) 640
Eco32I GATATC 1 cut(s) 681
Eco47I GGWCC 1 cut(s) 270
Eco53kI GAGCTC 1 cut(s) 158
Eco57I CTGAAG 2 cut(s) 398, 1698
Eco88I CYCGRG 1 cut(s) 1523
EcoICRI GAGCTC 1 cut(s) 158
EcoNI CCTNNNNNAGG 2 cut(s) 1170, 1416
EcoO109I RGGNCCY 1 cut(s) 655
EcoRI GAATTC 2 cut(s) 49, 1968
EcoRII CCWGG 2 cut(s) 1987, 2130
EcoRV GATATC 1 cut(s) 681
EcoT14I CCWWGG 5 cut(s) 117, 516, 1345, 1412, 1596
EcoT38I GRGCYC 1 cut(s) 160
ErhI CCWWGG 5 cut(s) 117, 516, 1345, 1412, 1596
Esp3I CGTCTC 1 cut(s) 914
FaeI CATG 5 cut(s) 419, 520, 551, 946, 1549
FalI AAGNNNNNCTT 2 cut(s) 1488, 1520
FaqI GGGAC 1 cut(s) 1707
FatI CATG 5 cut(s) 415, 516, 547, 942, 1545
FokI GGATG 4 cut(s) 260, 299, 1406, 2020
FriOI GRGCYC 1 cut(s) 160
FspBI CTAG 8 cut(s) 347, 1103, 1139, 1287, 1355, 1568, 1763, 1922
FspI TGCGCA 1 cut(s) 1122
GlaI GCGC 5 cut(s) 102, 168, 174, 538, 1122
GsaI CCCAGC 2 cut(s) 1260, 1665
HaeII RGCGCY 3 cut(s) 104, 176, 540
HaeIII GGCC 5 cut(s) 116, 656, 1411, 1711, 2028
HapII CCGG 3 cut(s) 104, 153, 294
HgaI GACGC 3 cut(s) 615, 847, 1726
HhaI GCGC 5 cut(s) 103, 169, 175, 539, 1123
Hin1II CATG 5 cut(s) 419, 520, 551, 946, 1549
Hin6I GCGC 5 cut(s) 101, 167, 173, 537, 1121
HinP1I GCGC 5 cut(s) 101, 167, 173, 537, 1121
HincII GTYRAC 1 cut(s) 1645
HindII GTYRAC 1 cut(s) 1645
HinfI GANTC 9 cut(s) 136, 184, 199, 707, 1293, 1460, 1728, 1778, 2081
HpaII CCGG 3 cut(s) 104, 153, 294
Hpy166II GTNNAC 1 cut(s) 1645
Hpy188III TCNNGA 7 cut(s) 227, 430, 593, 1377, 1496, 1512, 1763
Hpy8I GTNNAC 1 cut(s) 1645
Hpy99I CGWCG 1 cut(s) 863
HpyCH4III ACNGT 7 cut(s) 85, 508, 670, 772, 839, 1452, 1555
HpyF3I CTNAG 9 cut(s) 138, 186, 201, 338, 471, 480, 630, 1021, 1464
Hsp92II CATG 5 cut(s) 419, 520, 551, 946, 1549
HspAI GCGC 5 cut(s) 101, 167, 173, 537, 1121
Kzo9I GATC 8 cut(s) 189, 289, 303, 392, 697, 1612, 1649, 2058
LweI GCATC 9 cut(s) 62, 421, 532, 835, 1250, 1616, 1659, 1852, 2001
MaeI CTAG 8 cut(s) 347, 1103, 1139, 1287, 1355, 1568, 1763, 1922
MaeIII GTNAC 6 cut(s) 42, 79, 1216, 1600, 1714, 2008
MalI GATC 8 cut(s) 191, 291, 305, 394, 699, 1614, 1651, 2060
MbiI CCGCTC 1 cut(s) 2145
MboI GATC 8 cut(s) 189, 289, 303, 392, 697, 1612, 1649, 2058
MfeI CAATTG 2 cut(s) 1116, 1839
MflI RGATCY 5 cut(s) 189, 303, 392, 697, 2058
MhlI GDGCHC 4 cut(s) 160, 1138, 1487, 1831
MlyI GAGTC 5 cut(s) 130, 178, 193, 1469, 2090
MseI TTAA 5 cut(s) 87, 953, 1067, 1559, 1755
MslI CAYNNNNRTG 1 cut(s) 1453
MspA1I CMGCKG 1 cut(s) 1061
MspI CCGG 3 cut(s) 104, 153, 294
MspR9I CCNGG 3 cut(s) 294, 1989, 2132
MunI CAATTG 2 cut(s) 1116, 1839
Mva1269I GAATGC 2 cut(s) 217, 1900
MvaI CCWGG 2 cut(s) 1989, 2132
MvnI CGCG 1 cut(s) 858
NciI CCSGG 1 cut(s) 294
NcoI CCATGG 1 cut(s) 516
NdeII GATC 8 cut(s) 189, 289, 303, 392, 697, 1612, 1649, 2058
NheI GCTAGC 1 cut(s) 1354
NlaIII CATG 5 cut(s) 419, 520, 551, 946, 1549
NlaIV GGNNCC 5 cut(s) 253, 305, 657, 726, 1543
NmeAIII GCCGAG 1 cut(s) 2126
NmuCI GTSAC 2 cut(s) 79, 1714
NsbI TGCGCA 1 cut(s) 1122
OliI CACNNNNGTG 1 cut(s) 1453
PaeR7I CTCGAG 1 cut(s) 1523
PceI AGGCCT 2 cut(s) 1411, 1711
PcsI WCGNNNNNNNCGW 1 cut(s) 623
PctI GAATGC 2 cut(s) 217, 1900
PfeI GAWTC 4 cut(s) 707, 1293, 1728, 1778
PleI GAGTC 5 cut(s) 130, 178, 193, 1468, 2089
PpsI GAGTC 5 cut(s) 130, 178, 193, 1468, 2089
PsiI TTATAA 1 cut(s) 1341
Psp124BI GAGCTC 1 cut(s) 160
Psp6I CCWGG 2 cut(s) 1987, 2130
PspFI CCCAGC 2 cut(s) 1256, 1661
PspGI CCWGG 2 cut(s) 1987, 2130
PspN4I GGNNCC 5 cut(s) 253, 305, 657, 726, 1543
PspPI GGNCC 2 cut(s) 270, 655
PspXI VCTCGAGB 1 cut(s) 1523
PstI CTGCAG 2 cut(s) 391, 1198
PstNI CAGNNNCTG 2 cut(s) 674, 1202
PsuI RGATCY 5 cut(s) 189, 303, 392, 697, 2058
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 1 cut(s) 126
RsaNI GTAC 1 cut(s) 125
RseI CAYNNNNRTG 1 cut(s) 1453
SacI GAGCTC 1 cut(s) 160
SaqAI TTAA 5 cut(s) 87, 953, 1067, 1559, 1755
Sau3AI GATC 8 cut(s) 189, 289, 303, 392, 697, 1612, 1649, 2058
Sau96I GGNCC 2 cut(s) 270, 655
ScaI AGTACT 1 cut(s) 126
SchI GAGTC 5 cut(s) 130, 178, 193, 1469, 2090
ScrFI CCNGG 3 cut(s) 294, 1989, 2132
SduI GDGCHC 4 cut(s) 160, 1138, 1487, 1831
SfaNI GCATC 9 cut(s) 62, 421, 532, 835, 1250, 1616, 1659, 1852, 2001
SfcI CTRYAG 3 cut(s) 10, 387, 1194
Sfr274I CTCGAG 1 cut(s) 1523
SinI GGWCC 1 cut(s) 270
SlaI CTCGAG 1 cut(s) 1523
SmiMI CAYNNNNRTG 1 cut(s) 1453
SmlI CTYRAG 5 cut(s) 227, 719, 1523, 1953, 2078
SmoI CTYRAG 5 cut(s) 227, 719, 1523, 1953, 2078
SpeI ACTAGT 1 cut(s) 1567
SseBI AGGCCT 2 cut(s) 1411, 1711
SsiI CCGC 4 cut(s) 150, 745, 856, 2143
SspMI CTAG 8 cut(s) 347, 1103, 1139, 1287, 1355, 1568, 1763, 1922
SstI GAGCTC 1 cut(s) 160
StuI AGGCCT 2 cut(s) 1411, 1711
StyD4I CCNGG 3 cut(s) 292, 1987, 2130
StyI CCWWGG 5 cut(s) 117, 516, 1345, 1412, 1596
TaaI ACNGT 7 cut(s) 85, 508, 670, 772, 839, 1452, 1555
TaqI TCGA 4 cut(s) 70, 850, 1524, 1995
TatI WGTACW 1 cut(s) 124
TauI GCSGC 2 cut(s) 152, 748
TfiI GAWTC 4 cut(s) 707, 1293, 1728, 1778
Tru1I TTAA 5 cut(s) 87, 953, 1067, 1559, 1755
Tru9I TTAA 5 cut(s) 87, 953, 1067, 1559, 1755
TscAI CASTG 9 cut(s) 262, 558, 691, 1029, 1099, 1365, 1455, 1492, 1839
TseFI GTSAC 2 cut(s) 79, 1714
Tsp45I GTSAC 2 cut(s) 79, 1714
TspDTI ATGAA 8 cut(s) 17, 588, 594, 720, 931, 1410, 1547, 1863
TspGWI ACGGA 3 cut(s) 30, 632, 1882
TspRI CASTG 9 cut(s) 262, 558, 691, 1029, 1099, 1365, 1455, 1492, 1839
VpaK11BI GGWCC 1 cut(s) 270
XagI CCTNNNNNAGG 2 cut(s) 1170, 1416
XapI RAATTY 4 cut(s) 49, 1310, 1468, 1968
XbaI TCTAGA 1 cut(s) 1762
XcmI CCANNNNNNNNNTGG 1 cut(s) 314
XhoI CTCGAG 1 cut(s) 1523
XspI CTAG 8 cut(s) 347, 1103, 1139, 1287, 1355, 1568, 1763, 1922
ZrmI AGTACT 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.