RLG00000011193

Transmembrane and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0014677
Physical Location & Seq
Forward (+)
7504591 .. 7509334
4744 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011193

Sequence Viewer

Length: 2049 bp
ATGGAGGCCAAGGTAGAACTCACAGAGACTCAGAGATACGCTGCCGGAGCTCTGTTTGCGCTGGCGCTTCACCAGACTCAGATCCACCAGACTCGGCCGTTGAATGCTTTGCTCCCTCTTGAGGAGGAGACTATCGGGGATGGTGCCAGTGCTGGCAGGACCATTTCGGTTTCGGATGATCCCGGCATTTGGATCCACGAGAGTTCTGGTTTGCTTTATCCTGTTCTCAGGTTTCTAGGAGTGGAGGACAAATCGTGGAAGGGGCTGAAGGAAACTGCAGGATCTTCTTCACAAGTTAGGCATCATGTAGGAGCGTTCTTGACCTTACTAAAGGAGGGAGCTGATGAGGTGGCTTCTGCTGAGAAAACTGAGAAGGAAGTTGCTCTGACAAAAACTGTTGATACCATGGTTCGTAGTGAGGAAAGCGCCGATGCTCATGCAGTGGATAGGAGTGAGAATTATGAATATGAAGCTAAATGTCGTGAAAAATTTTCCGATAAGGAAACGGAAATAGCGTTTGAGGTCTCTGACAAGCCTTATGAGGCCCCAAAGAGGATAGTTTCTGTGATATCCACTGAAATAAAAGATCCAAATGAATCTGAGCGCCTTGAGGTGCCCGTTGAAGAAGGAAGGCGGCTCGGTTATGAGAAGAAAATAACAGTTCTTTATGCAATTCTGTCAGCCTGTGTGGCAGACAATAGTGAAAGTGGCGATAAAGTAAGAAACGGTTATGATGCTCGACACCGCGTCGCATTGCGGTTGCTGGCAACTTGGCTTGGGGTTGAATGGCTGAAAGTGGAAGTTATGGAGACGATGGTTGCTTGTTCTTTCATGGCTTCGTTAAAGGAGGTTGCTAATAAAGAGAAGACAGAAGGTGTTGATGGAGAGAAAAAACAAAATGATGATACCTCAGTGGAAAAATGGAAACGGGGAGGTCTAATTGGTGCAGCTGCTTTAACAGGAGGAACTTTGATGGCTATCACTGGTGGTCTAGCTGCTCCTGCAATTGCGCAGGGATTGAGTGCTCTAGCTCCTGTATTGGGTGGCATTGTTCCTGCAATAGGAGCAACTGGCTTCGCTGCTGCAGCAACTGCCACGGGGTCTGTTACTGGTTCTCTTGCTGTTGCTGCATCATTTGGAGCCGCTGGGGCTGGACTTACGGGAACTAAAATGGCTAGAAGAATCGGCAACATTGAAGAATTTGAGTTCAAAGCAGTTGAAGGAACTTATAACCAAGGACGGCTAGCAGTGGGAATAGTGGTTTCAGGACTTGTTTTTGAGGATGAAGATTTTATGAGGCCTTGGGAAGGCTACAATGATCACTTGGAGAGGTATGCACTGTGGTGGGAGTCTAAGAATTTGGTTGCATTGAGCACTGCAATTCAAGACTGGCTTACTTCAAGAATTGCCCTCGAGTTGATGAAAGAAGGTGCCATGCTGACTGTATTAAACACACTAGTAGCAGCGTTCGCTATGCCAGCAACCTTGGTTACTGCATCTGATCTTATAGATAGCAAATGGGCGATTGCAGTTGACAGATCAGATAAAGCTGGGAAAATGCTTGCTGAAGTATTGTTGAAGGGACTGCAAGGCAACAGGCCTGTGACGCTCATAGGATTCTCACTTGGGGGCAGAGTGATTTTTAAATGTCTAGAATGTTTAGCTGAATCAGAAGGGAACAATGCTGGTCTGGTAGAAAGGGTTGTCCTGCTTGGAGCACCAGTGTCAATTGAAGATGAAAATTGGGAAGATGCACGGAAGGTGGTGGCAGGAAGATTTGTGAATGCTTTTTCTACAAATGATTGGACACTTGGAGTTGCCTTTCGTGCAAGTTTGCTATCTCAAGGTTTGGCTGGAATTCAAGCTGTCAATGTTCCTGGCATCGAAAATGTTGATGTAACGCAATTTGTAGAAGGCCACTCATCCTATCTTTGGAAGACGAAACAGATCTTGGAGCTGCTTGAACTTGAGTCTTACTACCCTGTTTTCAGAAAAGAAAATACAGAGGATAACACACCCCAGGAACAAAACAGCTCGGCTGCCACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF726

Protein Analysis

683

Amino Acids

73.67

Weight (kDa)

4.94

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF726 PF05277 307 - 656 1.9e-94 Protein of unknown function (DUF726)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014677)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g39020 FvH4_2g39020
malus_domestica MD15G1017500.v1.1
prunus_persica Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1
pyrus_communis pycom15g01540
rosa_chinensis RchiOBHm_Chr6g0302121
rosa_laevigata RLG00000011193
rosa_multiflora Rmu_ssc0000160.1_g000011
rosa_roxburghii Rroxscaffold_7G00166060
rosa_rugosa Rorug06G0312400
rosa_samantha Rh6AG424800 Rh6BG477600 Rh6CG437700 Rh6DG424800
rosa_wichuraiana Rw6G036800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1230
Acc16I TGCGCA 1 cut(s) 1011
AccB1I GGYRCC 3 cut(s) 143, 613, 1430
AccII CGCG 1 cut(s) 747
AciI CCGC 4 cut(s) 634, 745, 757, 1143
AclWI GGATC 6 cut(s) 76, 173, 187, 200, 289, 581
AcoI YGGCCR 1 cut(s) 95
AcsI RAATTY 4 cut(s) 488, 1199, 1357, 1857
AcuI CTGAAG 2 cut(s) 287, 1587
AfiI CCNNNNNNNGG 7 cut(s) 121, 189, 552, 1040, 1061, 1307, 1932
AhdI GACNNNNNGTC 1 cut(s) 746
AhlI ACTAGT 1 cut(s) 1456
AjnI CCWGG 2 cut(s) 1876, 2019
AjuI GAANNNNNNNTTGG 2 cut(s) 1934, 1966
AleI CACNNNNGTG 1 cut(s) 1342
Alw21I GWGCWC 4 cut(s) 52, 1027, 1376, 1720
Alw26I GTCTC 4 cut(s) 20, 122, 529, 803
AlwI GGATC 6 cut(s) 76, 173, 187, 200, 289, 581
AlwNI CAGNNNCTG 1 cut(s) 1091
Ama87I CYCGRG 1 cut(s) 1412
AoxI GGCC 6 cut(s) 6, 95, 543, 1298, 1598, 1915
ApoI RAATTY 4 cut(s) 488, 1199, 1357, 1857
AspLEI GCGC 5 cut(s) 61, 67, 428, 606, 1012
AspS9I GGNCC 2 cut(s) 159, 544
AsuC2I CCSGG 1 cut(s) 183
AsuHPI GGTGA 1 cut(s) 62
AsuNHI GCTAGC 1 cut(s) 1243
AvaI CYCGRG 1 cut(s) 1412
AvaII GGWCC 1 cut(s) 159
BaeGI GKGCMC 1 cut(s) 618
BaeI ACNNNNGTAYC 4 cut(s) 393, 426, 897, 930
BamHI GGATCC 1 cut(s) 192
BanI GGYRCC 3 cut(s) 143, 613, 1430
BanII GRGCYC 1 cut(s) 52
BauI CACGAG 1 cut(s) 197
BbsI GAAGAC 2 cut(s) 872, 1943
Bbv12I GWGCWC 4 cut(s) 52, 1027, 1376, 1720
BccI CCATC 4 cut(s) 134, 808, 875, 967
BceAI ACGGC 2 cut(s) 82, 1256
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 2 cut(s) 1878, 2021
BclI TGATCA 1 cut(s) 1318
BcnI CCSGG 1 cut(s) 183
BcoDI GTCTC 4 cut(s) 20, 122, 529, 803
BcuI ACTAGT 1 cut(s) 1456
BfaI CTAG 7 cut(s) 236, 992, 1028, 1176, 1244, 1457, 1652
BfmI CTRYAG 2 cut(s) 276, 1083
BfoI RGCGCY 3 cut(s) 68, 429, 607
BglI GCCNNNNNGGC 2 cut(s) 689, 1148
BglII AGATCT 1 cut(s) 1947
Bme1390I CCNGG 3 cut(s) 183, 1878, 2021
Bme18I GGWCC 1 cut(s) 159
BmeRI GACNNNNNGTC 1 cut(s) 746
BmeT110I CYCGRG 1 cut(s) 1412
BmgT120I GGNCC 2 cut(s) 159, 544
BmiI GGNNCC 6 cut(s) 145, 194, 546, 615, 1141, 1432
BmrFI CCNGG 3 cut(s) 183, 1878, 2021
BmsI GCATC 7 cut(s) 310, 421, 724, 1139, 1505, 1741, 1890
BmtI GCTAGC 1 cut(s) 1247
BpiI GAAGAC 2 cut(s) 872, 1943
BpuEI CTTGAG 4 cut(s) 140, 629, 1827, 1988
BpuMI CCSGG 1 cut(s) 183
BsaBI GATNNNNATC 1 cut(s) 977
BsaI GGTCTC 1 cut(s) 529
BsaJI CCNNGG 7 cut(s) 9, 405, 1095, 1234, 1301, 1485, 2019
BsaXI ACNNNNNCTCC 2 cut(s) 1707, 1737
Bsc4I CCNNNNNNNGG 7 cut(s) 121, 189, 552, 1040, 1061, 1307, 1932
Bse1I ACTGG 6 cut(s) 147, 988, 1075, 1114, 1394, 1721
Bse3DI GCAATG 1 cut(s) 752
Bse8I GATNNNNATC 1 cut(s) 977
BseBI CCWGG 2 cut(s) 1878, 2021
BseDI CCNNGG 7 cut(s) 9, 405, 1095, 1234, 1301, 1485, 2019
BseGI GGATG 4 cut(s) 145, 181, 1288, 1922
BseJI GATNNNNATC 1 cut(s) 977
BseLI CCNNNNNNNGG 7 cut(s) 121, 189, 552, 1040, 1061, 1307, 1932
BseMI GCAATG 1 cut(s) 752
BseMII CTCAG 7 cut(s) 44, 92, 241, 351, 360, 591, 924
BseNI ACTGG 6 cut(s) 147, 988, 1075, 1114, 1394, 1721
BseRI GAGGAG 2 cut(s) 137, 140
BseSI GKGCMC 1 cut(s) 618
BseX3I CGGCCG 1 cut(s) 95
BseYI CCCAGC 2 cut(s) 1145, 1550
BsgI GTGCAG 1 cut(s) 966
Bsh1236I CGCG 1 cut(s) 747
Bsh1285I CGRYCG 1 cut(s) 98
BshFI GGCC 6 cut(s) 8, 97, 545, 1300, 1600, 1917
BshNI GGYRCC 3 cut(s) 143, 613, 1430
BsiEI CGRYCG 1 cut(s) 98
BsiHKAI GWGCWC 4 cut(s) 52, 1027, 1376, 1720
BsiHKCI CYCGRG 1 cut(s) 1412
BsiSI CCGG 2 cut(s) 45, 183
BslFI GGGAC 1 cut(s) 1596
BslI CCNNNNNNNGG 7 cut(s) 121, 189, 552, 1040, 1061, 1307, 1932
BsmAI GTCTC 4 cut(s) 20, 122, 529, 803
BsmBI CGTCTC 1 cut(s) 803
BsmFI GGGAC 1 cut(s) 1596
BsmI GAATGC 2 cut(s) 109, 1789
BsnI GGCC 6 cut(s) 8, 97, 545, 1300, 1600, 1917
Bso31I GGTCTC 1 cut(s) 529
BsoBI CYCGRG 1 cut(s) 1412
Bsp1286I GDGCHC 5 cut(s) 52, 618, 1027, 1376, 1720
Bsp143I GATC 9 cut(s) 81, 178, 192, 281, 586, 1318, 1501, 1538, 1947
Bsp19I CCATGG 1 cut(s) 405
BspACI CCGC 4 cut(s) 634, 745, 757, 1143
BspANI GGCC 6 cut(s) 8, 97, 545, 1300, 1600, 1917
BspCNI CTCAG 7 cut(s) 43, 91, 240, 352, 361, 592, 923
BspFNI CGCG 1 cut(s) 747
BspLI GGNNCC 6 cut(s) 145, 194, 546, 615, 1141, 1432
BspMAI CTGCAG 2 cut(s) 280, 1087
BspOI GCTAGC 1 cut(s) 1247
BspPI GGATC 6 cut(s) 76, 173, 187, 200, 289, 581
BspT107I GGYRCC 3 cut(s) 143, 613, 1430
BspTNI GGTCTC 1 cut(s) 529
BsrDI GCAATG 1 cut(s) 752
BsrI ACTGG 6 cut(s) 147, 988, 1075, 1114, 1394, 1721
BssECI CCNNGG 7 cut(s) 9, 405, 1095, 1234, 1301, 1485, 2019
BssMI GATC 9 cut(s) 81, 178, 192, 281, 586, 1318, 1501, 1538, 1947
BssSI CACGAG 1 cut(s) 197
BssT1I CCWWGG 5 cut(s) 9, 405, 1234, 1301, 1485
Bst2BI CACGAG 1 cut(s) 197
Bst2UI CCWGG 2 cut(s) 1878, 2021
Bst4CI ACNGT 5 cut(s) 397, 661, 728, 1341, 1444
BstAPI GCANNNNNTGC 1 cut(s) 1091
BstC8I GCNNGC 6 cut(s) 63, 154, 765, 1245, 1479, 1563
BstDEI CTNAG 8 cut(s) 30, 78, 227, 360, 369, 600, 910, 1353
BstDSI CCRYGG 2 cut(s) 405, 1095
BstENI CCTNNNNNAGG 2 cut(s) 1059, 1305
BstF5I GGATG 4 cut(s) 145, 181, 1288, 1922
BstFNI CGCG 1 cut(s) 747
BstH2I RGCGCY 3 cut(s) 68, 429, 607
BstHHI GCGC 5 cut(s) 61, 67, 428, 606, 1012
BstKTI GATC 9 cut(s) 84, 181, 195, 284, 589, 1321, 1504, 1541, 1950
BstMAI GTCTC 4 cut(s) 20, 122, 529, 803
BstMBI GATC 9 cut(s) 81, 178, 192, 281, 586, 1318, 1501, 1538, 1947
BstMCI CGRYCG 1 cut(s) 98
BstNI CCWGG 2 cut(s) 1878, 2021
BstSCI CCNGG 3 cut(s) 181, 1876, 2019
BstSFI CTRYAG 2 cut(s) 276, 1083
BstSLI GKGCMC 1 cut(s) 618
BstUI CGCG 1 cut(s) 747
BstV2I GAAGAC 2 cut(s) 872, 1943
BstX2I RGATCY 5 cut(s) 81, 192, 281, 586, 1947
BstYI RGATCY 5 cut(s) 81, 192, 281, 586, 1947
BstZI CGGCCG 1 cut(s) 95
BsuRI GGCC 6 cut(s) 8, 97, 545, 1300, 1600, 1917
BtgI CCRYGG 2 cut(s) 405, 1095
BtsCI GGATG 4 cut(s) 145, 181, 1288, 1922
BtsI GCAGTG 3 cut(s) 447, 1254, 1374
BtsIMutI CAGTG 9 cut(s) 154, 447, 573, 918, 981, 1254, 1337, 1374, 1728
Cac8I GCNNGC 6 cut(s) 63, 154, 765, 1245, 1479, 1563
CaiI CAGNNNCTG 1 cut(s) 1091
CfoI GCGC 5 cut(s) 61, 67, 428, 606, 1012
Cfr13I GGNCC 2 cut(s) 159, 544
CseI GACGC 2 cut(s) 736, 1615
CviAII CATG 5 cut(s) 305, 406, 437, 832, 1435
DdeI CTNAG 8 cut(s) 30, 78, 227, 360, 369, 600, 910, 1353
DpnI GATC 9 cut(s) 83, 180, 194, 283, 588, 1320, 1503, 1540, 1949
DpnII GATC 9 cut(s) 81, 178, 192, 281, 586, 1318, 1501, 1538, 1947
DraI TTTAAA 1 cut(s) 1645
DriI GACNNNNNGTC 1 cut(s) 746
EaeI YGGCCR 1 cut(s) 95
EagI CGGCCG 1 cut(s) 95
Eam1105I GACNNNNNGTC 1 cut(s) 746
Ecl136II GAGCTC 1 cut(s) 50
EclXI CGGCCG 1 cut(s) 95
Eco130I CCWWGG 5 cut(s) 9, 405, 1234, 1301, 1485
Eco147I AGGCCT 2 cut(s) 1300, 1600
Eco24I GRGCYC 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 529
Eco32I GATATC 1 cut(s) 570
Eco47I GGWCC 1 cut(s) 159
Eco52I CGGCCG 1 cut(s) 95
Eco53kI GAGCTC 1 cut(s) 50
Eco57I CTGAAG 2 cut(s) 287, 1587
Eco88I CYCGRG 1 cut(s) 1412
EcoICRI GAGCTC 1 cut(s) 50
EcoNI CCTNNNNNAGG 2 cut(s) 1059, 1305
EcoO109I RGGNCCY 1 cut(s) 544
EcoRI GAATTC 1 cut(s) 1857
EcoRII CCWGG 2 cut(s) 1876, 2019
EcoRV GATATC 1 cut(s) 570
EcoT14I CCWWGG 5 cut(s) 9, 405, 1234, 1301, 1485
EcoT38I GRGCYC 1 cut(s) 52
ErhI CCWWGG 5 cut(s) 9, 405, 1234, 1301, 1485
Esp3I CGTCTC 1 cut(s) 803
FaeI CATG 5 cut(s) 308, 409, 440, 835, 1438
FalI AAGNNNNNCTT 2 cut(s) 1377, 1409
FaqI GGGAC 1 cut(s) 1596
FatI CATG 5 cut(s) 304, 405, 436, 831, 1434
FbaI TGATCA 1 cut(s) 1318
FokI GGATG 4 cut(s) 152, 188, 1295, 1909
FriOI GRGCYC 1 cut(s) 52
FspBI CTAG 7 cut(s) 236, 992, 1028, 1176, 1244, 1457, 1652
FspI TGCGCA 1 cut(s) 1011
GlaI GCGC 5 cut(s) 60, 66, 427, 605, 1011
GsaI CCCAGC 2 cut(s) 1149, 1554
HaeII RGCGCY 3 cut(s) 68, 429, 607
HaeIII GGCC 6 cut(s) 8, 97, 545, 1300, 1600, 1917
HapII CCGG 2 cut(s) 45, 183
HgaI GACGC 2 cut(s) 736, 1615
HhaI GCGC 5 cut(s) 61, 67, 428, 606, 1012
Hin1II CATG 5 cut(s) 308, 409, 440, 835, 1438
Hin6I GCGC 5 cut(s) 59, 65, 426, 604, 1010
HinP1I GCGC 5 cut(s) 59, 65, 426, 604, 1010
HincII GTYRAC 1 cut(s) 1534
HindII GTYRAC 1 cut(s) 1534
HinfI GANTC 9 cut(s) 28, 76, 91, 596, 1182, 1349, 1617, 1667, 1970
HpaII CCGG 2 cut(s) 45, 183
HphI GGTGA 1 cut(s) 62
Hpy166II GTNNAC 1 cut(s) 1534
Hpy188III TCNNGA 7 cut(s) 119, 319, 482, 1266, 1385, 1401, 1652
Hpy8I GTNNAC 1 cut(s) 1534
Hpy99I CGWCG 1 cut(s) 752
HpyCH4III ACNGT 5 cut(s) 397, 661, 728, 1341, 1444
HpyF3I CTNAG 8 cut(s) 30, 78, 227, 360, 369, 600, 910, 1353
Hsp92II CATG 5 cut(s) 308, 409, 440, 835, 1438
HspAI GCGC 5 cut(s) 59, 65, 426, 604, 1010
Ksp22I TGATCA 1 cut(s) 1318
Kzo9I GATC 9 cut(s) 81, 178, 192, 281, 586, 1318, 1501, 1538, 1947
LweI GCATC 7 cut(s) 310, 421, 724, 1139, 1505, 1741, 1890
MaeI CTAG 7 cut(s) 236, 992, 1028, 1176, 1244, 1457, 1652
MaeIII GTNAC 4 cut(s) 1105, 1489, 1603, 1897
MalI GATC 9 cut(s) 83, 180, 194, 283, 588, 1320, 1503, 1540, 1949
MboI GATC 9 cut(s) 81, 178, 192, 281, 586, 1318, 1501, 1538, 1947
MfeI CAATTG 2 cut(s) 1005, 1728
MflI RGATCY 5 cut(s) 81, 192, 281, 586, 1947
MhlI GDGCHC 5 cut(s) 52, 618, 1027, 1376, 1720
MlyI GAGTC 5 cut(s) 22, 70, 85, 1358, 1979
MseI TTAA 4 cut(s) 842, 956, 1448, 1644
MslI CAYNNNNRTG 1 cut(s) 1342
MspA1I CMGCKG 2 cut(s) 950, 1145
MspI CCGG 2 cut(s) 45, 183
MspR9I CCNGG 3 cut(s) 183, 1878, 2021
MunI CAATTG 2 cut(s) 1005, 1728
Mva1269I GAATGC 2 cut(s) 109, 1789
MvaI CCWGG 2 cut(s) 1878, 2021
MvnI CGCG 1 cut(s) 747
NciI CCSGG 1 cut(s) 183
NcoI CCATGG 1 cut(s) 405
NdeII GATC 9 cut(s) 81, 178, 192, 281, 586, 1318, 1501, 1538, 1947
NheI GCTAGC 1 cut(s) 1243
NlaIII CATG 5 cut(s) 308, 409, 440, 835, 1438
NlaIV GGNNCC 6 cut(s) 145, 194, 546, 615, 1141, 1432
NmeAIII GCCGAG 2 cut(s) 73, 2015
NmuCI GTSAC 1 cut(s) 1603
NsbI TGCGCA 1 cut(s) 1011
OliI CACNNNNGTG 1 cut(s) 1342
PaeR7I CTCGAG 1 cut(s) 1412
PceI AGGCCT 2 cut(s) 1300, 1600
PcsI WCGNNNNNNNCGW 1 cut(s) 512
PctI GAATGC 2 cut(s) 109, 1789
PfeI GAWTC 4 cut(s) 596, 1182, 1617, 1667
PleI GAGTC 5 cut(s) 22, 70, 85, 1357, 1978
PpsI GAGTC 5 cut(s) 22, 70, 85, 1357, 1978
PsiI TTATAA 1 cut(s) 1230
Psp124BI GAGCTC 1 cut(s) 52
Psp6I CCWGG 2 cut(s) 1876, 2019
PspFI CCCAGC 2 cut(s) 1145, 1550
PspGI CCWGG 2 cut(s) 1876, 2019
PspN4I GGNNCC 6 cut(s) 145, 194, 546, 615, 1141, 1432
PspPI GGNCC 2 cut(s) 159, 544
PspXI VCTCGAGB 1 cut(s) 1412
PstI CTGCAG 2 cut(s) 280, 1087
PstNI CAGNNNCTG 1 cut(s) 1091
PsuI RGATCY 5 cut(s) 81, 192, 281, 586, 1947
PvuII CAGCTG 1 cut(s) 950
RseI CAYNNNNRTG 1 cut(s) 1342
SacI GAGCTC 1 cut(s) 52
SaqAI TTAA 4 cut(s) 842, 956, 1448, 1644
Sau3AI GATC 9 cut(s) 81, 178, 192, 281, 586, 1318, 1501, 1538, 1947
Sau96I GGNCC 2 cut(s) 159, 544
SchI GAGTC 5 cut(s) 22, 70, 85, 1358, 1979
ScrFI CCNGG 3 cut(s) 183, 1878, 2021
SduI GDGCHC 5 cut(s) 52, 618, 1027, 1376, 1720
SfaNI GCATC 7 cut(s) 310, 421, 724, 1139, 1505, 1741, 1890
SfcI CTRYAG 2 cut(s) 276, 1083
Sfr274I CTCGAG 1 cut(s) 1412
SinI GGWCC 1 cut(s) 159
SlaI CTCGAG 1 cut(s) 1412
SmiMI CAYNNNNRTG 1 cut(s) 1342
SmlI CTYRAG 5 cut(s) 119, 608, 1412, 1842, 1967
SmoI CTYRAG 5 cut(s) 119, 608, 1412, 1842, 1967
SpeI ACTAGT 1 cut(s) 1456
SseBI AGGCCT 2 cut(s) 1300, 1600
SsiI CCGC 4 cut(s) 634, 745, 757, 1143
SspMI CTAG 7 cut(s) 236, 992, 1028, 1176, 1244, 1457, 1652
SstI GAGCTC 1 cut(s) 52
StuI AGGCCT 2 cut(s) 1300, 1600
StyD4I CCNGG 3 cut(s) 181, 1876, 2019
StyI CCWWGG 5 cut(s) 9, 405, 1234, 1301, 1485
TaaI ACNGT 5 cut(s) 397, 661, 728, 1341, 1444
TaqI TCGA 3 cut(s) 739, 1413, 1884
TauI GCSGC 2 cut(s) 637, 1145
TfiI GAWTC 4 cut(s) 596, 1182, 1617, 1667
Tru1I TTAA 4 cut(s) 842, 956, 1448, 1644
Tru9I TTAA 4 cut(s) 842, 956, 1448, 1644
TscAI CASTG 9 cut(s) 154, 447, 580, 918, 988, 1254, 1344, 1381, 1728
TseFI GTSAC 1 cut(s) 1603
Tsp45I GTSAC 1 cut(s) 1603
TspDTI ATGAA 7 cut(s) 477, 483, 609, 820, 1299, 1436, 1752
TspGWI ACGGA 2 cut(s) 521, 1771
TspRI CASTG 9 cut(s) 154, 447, 580, 918, 988, 1254, 1344, 1381, 1728
VpaK11BI GGWCC 1 cut(s) 159
XagI CCTNNNNNAGG 2 cut(s) 1059, 1305
XapI RAATTY 4 cut(s) 488, 1199, 1357, 1857
XbaI TCTAGA 1 cut(s) 1651
XcmI CCANNNNNNNNNTGG 1 cut(s) 203
XhoI CTCGAG 1 cut(s) 1412
XspI CTAG 7 cut(s) 236, 992, 1028, 1176, 1244, 1457, 1652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.