Rh6BG477600

Transmembrane and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0014677
Physical Location & Seq
Forward (+)
68380085 .. 68387275
7191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG477600.1

Sequence Viewer

Length: 1920 bp
ATGAAATTCTGTAGGTTCGCTAAATTGAAACCCCTACTTCCGTTACCGAATTCTAACCTCTTGCGTTTTCGATGCTCTGTGACCATTAAACCCGAATTAGCAGCGCCGGTTATGGAGGCCAAGGTAGTACTCACAGAGACTCAGAGATACGCCGCCGGAGCTCTGTTTGCGCTGGCGCTTCACCAGACTCAGATCCACCAGACTCGGCCGTCGAATGCTTTGCTCCCTCTTGAGGAGGAGACTATCGGGGATGGTGCCAGTGCTGGCACTGGCAGGACCATTTCGGTTTCGGATGATCCCGGCATTTGGATCCACGAGAGTTCTGGTTTGCTTTATCCTGTTCTCAGGTTTCTAGGAGTGGAGAACAGATCGTGGAAGGGGCTGAAGGAAACTGCAGGATCTTCTTCACAAGTTAGGCATCATGTAGGAGCGTTCTTGACCTTACTAAAGGAGGGAGCTGATGAGGTGGCTTCTGCTGAGAAGGAAGTTGCTCTGACTAAAACTGTTGATACCATGGTTCGTAGTGAGGAAAGCGCCGATGCTCATGCAGTGGATAGGAGTGAGAATTATGAATATGAAGCTAAATGTCGTGAAAAATTTTCCAATACTGAAACGGAAATAGCGTCTGAGGTCTCTGACAAGGCTTATGAGTCCCCAAAGAGGACAGTTTCTGTGATATCCACTGAAATAAAAGATCCAAATGAATCTAAATGCCTTGAGGTGCCTGTTGAAGAGGGAAGGCGGCTCAGTTATGAGAAGAAAATAACAGTTCTTTATGCAATTCTGTCAGCCTGTGTGGCAGACAATGGTGAAAGTGGCGATAAAGTAAGGAACGGTTATGATGCTCGACACCGCGTCGCATTGAGGTTGCTGGCAACTTGGCTTGGGGTTGAATGGCTGAAAGTGGAAGTTATGGAGACGATGGTTGCTTGTTCTTTCATGGCTTCGTTAAAGGAGGTTGCTAATAAAGAGAAGACAGAAGGTGTTGATGGAGAGAAAAAACAAAATGATGATACCTCAGTGGAAAAATGGAAACGGGGAGGACTAATTGGTGCAGCTGCTTTAACAGGAGGAACTTTGATGGCTATCACTGGTGGTCTAGCTGCTCCTGCAATTGCGCAGGGATTGAGTGCTCTAGCTCCTGTATTGGGTGGCATTGTTCCTGCAATAGGAGCAACTGGCTTCGCTGCTGCAGCAACTGCCACGGGGTCTGTTACTGGTTCTCTTGCTGTTGCTGCATCATTTGGAGCTGCTGGGGCTGGACTTACAGGAACTAAAATGGCTAGAAGAATCGGCAACATTGAAGAATTTGAGTTCAAAGCAGTTGAAGGAACTTATAACCAAGGACGGCTAGCAGTGGGAATAGTGGTTTCAGGACTTGTTTTTGAGGATGAAGATTTTATGAGGCCTTGGGAAGGCTACAATGACCACTTGGAGAGGTATGCACTGTGGTGGGAGTCTAAGAATTTGGTTGCATTGAGCACTGCAATTCAAGACTGGCTTACTTCAGGAATTGCCCTCGAGTTGATGAAAGAAGGTGCCATGCTGACTGTATTAAACACACTAGTAGCAGCGTTCGCTATGCCAGCAACCTTGGTTACTGCATCTGATCTTATAGATAGCAAATGGGCGATTGCAGTTGACAGATCAGATAAAGCTGGGAAGATGCTTGCTGAAGTATTGTTGAAGGGACTGCAAGGCAACAGGCCTGTGACGCTCATAGGATTCTCACTTGGGGGCAGAGTGATTTTTAAATGTCTAGAATGTTTAGCTGAATCAGAAGGGAACAATGCTGGTCTGGTAGAAAGGGTTGTCCTGCTTGGAGCACCAGTGTCAATTGAAGATGAAAATTGGGAAGATGCACGGAAGGTAGACTTATCTGTTTTTATGTTTCCAGATTTTAGTTGGTTTCTGCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF726

Protein Analysis

639

Amino Acids

68.83

Weight (kDa)

5.21

Isoelectric Point (pI)

34.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF726 PF05277 343 - 624 1.3e-69 Protein of unknown function (DUF726)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014677)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g39020 FvH4_2g39020
malus_domestica MD15G1017500.v1.1
prunus_persica Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1
pyrus_communis pycom15g01540
rosa_chinensis RchiOBHm_Chr6g0302121
rosa_laevigata RLG00000011193
rosa_multiflora Rmu_ssc0000160.1_g000011
rosa_roxburghii Rroxscaffold_7G00166060
rosa_rugosa Rorug06G0312400
rosa_samantha Rh6AG424800 Rh6BG477600 Rh6CG437700 Rh6DG424800
rosa_wichuraiana Rw6G036800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1338
AasI GACNNNNNNGTC 1 cut(s) 208
Acc16I TGCGCA 1 cut(s) 1119
AccB1I GGYRCC 3 cut(s) 254, 721, 1538
AccI GTMKAC 1 cut(s) 1872
AccII CGCG 1 cut(s) 855
AciI CCGC 3 cut(s) 153, 742, 853
AclWI GGATC 6 cut(s) 187, 290, 304, 317, 406, 689
AcoI YGGCCR 1 cut(s) 206
AcsI RAATTY 5 cut(s) 5, 49, 596, 1307, 1465
AcuI CTGAAG 3 cut(s) 404, 1491, 1695
AfaI GTAC 1 cut(s) 129
AfiI CCNNNNNNNGG 6 cut(s) 232, 306, 660, 1148, 1169, 1415
AgsI TTSAA 9 cut(s) 28, 731, 893, 1304, 1318, 1328, 1493, 1687, 1841
AhdI GACNNNNNGTC 1 cut(s) 854
AhlI ACTAGT 1 cut(s) 1564
AleI CACNNNNGTG 1 cut(s) 1450
AluBI AGCT 9 cut(s) 161, 458, 581, 1058, 1103, 1139, 1250, 1658, 1772
AluI AGCT 9 cut(s) 161, 458, 581, 1058, 1103, 1139, 1250, 1658, 1772
Alw21I GWGCWC 4 cut(s) 163, 1135, 1484, 1828
Alw26I GTCTC 4 cut(s) 131, 233, 637, 911
AlwI GGATC 6 cut(s) 187, 290, 304, 317, 406, 689
AlwNI CAGNNNCTG 2 cut(s) 671, 1199
Ama87I CYCGRG 1 cut(s) 1520
AoxI GGCC 4 cut(s) 117, 206, 1406, 1706
ApoI RAATTY 5 cut(s) 5, 49, 596, 1307, 1465
AspLEI GCGC 5 cut(s) 106, 172, 178, 536, 1120
AspS9I GGNCC 1 cut(s) 276
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 2 cut(s) 173, 821
AsuNHI GCTAGC 1 cut(s) 1351
AvaI CYCGRG 1 cut(s) 1520
AvaII GGWCC 1 cut(s) 276
BaeI ACNNNNGTAYC 4 cut(s) 501, 534, 1005, 1038
BamHI GGATCC 1 cut(s) 309
BanI GGYRCC 3 cut(s) 254, 721, 1538
BanII GRGCYC 1 cut(s) 163
BauI CACGAG 1 cut(s) 314
BbsI GAAGAC 1 cut(s) 980
Bbv12I GWGCWC 4 cut(s) 163, 1135, 1484, 1828
BccI CCATC 4 cut(s) 245, 916, 983, 1075
BceAI ACGGC 2 cut(s) 193, 1364
BcgI CGANNNNNNTGC 4 cut(s) 202, 236, 527, 561
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 4 cut(s) 131, 233, 637, 911
BcuI ACTAGT 1 cut(s) 1564
BfaI CTAG 7 cut(s) 353, 1100, 1136, 1284, 1352, 1565, 1760
BfmI CTRYAG 3 cut(s) 10, 393, 1191
BfoI RGCGCY 3 cut(s) 107, 179, 537
BglI GCCNNNNNGGC 1 cut(s) 797
BmcAI AGTACT 1 cut(s) 129
Bme1390I CCNGG 1 cut(s) 300
Bme18I GGWCC 1 cut(s) 276
BmeRI GACNNNNNGTC 1 cut(s) 854
BmeT110I CYCGRG 1 cut(s) 1520
BmgT120I GGNCC 1 cut(s) 276
BmiI GGNNCC 4 cut(s) 256, 311, 723, 1540
BmrFI CCNGG 1 cut(s) 300
BmsI GCATC 8 cut(s) 62, 427, 529, 832, 1247, 1613, 1656, 1849
BmtI GCTAGC 1 cut(s) 1355
BpiI GAAGAC 1 cut(s) 980
BpuEI CTTGAG 2 cut(s) 251, 737
BpuMI CCSGG 1 cut(s) 300
BsaBI GATNNNNATC 1 cut(s) 1085
BsaI GGTCTC 1 cut(s) 637
BsaJI CCNNGG 6 cut(s) 120, 513, 1203, 1342, 1409, 1593
BsaXI ACNNNNNCTCC 2 cut(s) 1815, 1845
Bsc4I CCNNNNNNNGG 6 cut(s) 232, 306, 660, 1148, 1169, 1415
Bse118I RCCGGY 1 cut(s) 106
Bse1I ACTGG 7 cut(s) 258, 274, 1096, 1183, 1222, 1502, 1829
Bse8I GATNNNNATC 1 cut(s) 1085
BseDI CCNNGG 6 cut(s) 120, 513, 1203, 1342, 1409, 1593
BseGI GGATG 3 cut(s) 256, 298, 1396
BseJI GATNNNNATC 1 cut(s) 1085
BseLI CCNNNNNNNGG 6 cut(s) 232, 306, 660, 1148, 1169, 1415
BseMII CTCAG 7 cut(s) 155, 203, 358, 468, 618, 760, 1032
BseNI ACTGG 7 cut(s) 258, 274, 1096, 1183, 1222, 1502, 1829
BseRI GAGGAG 2 cut(s) 248, 251
BseX3I CGGCCG 1 cut(s) 206
BseYI CCCAGC 2 cut(s) 1253, 1658
BsgI GTGCAG 1 cut(s) 1074
Bsh1236I CGCG 1 cut(s) 855
Bsh1285I CGRYCG 1 cut(s) 209
BshFI GGCC 4 cut(s) 119, 208, 1408, 1708
BshNI GGYRCC 3 cut(s) 254, 721, 1538
BsiEI CGRYCG 1 cut(s) 209
BsiHKAI GWGCWC 4 cut(s) 163, 1135, 1484, 1828
BsiHKCI CYCGRG 1 cut(s) 1520
BsiSI CCGG 3 cut(s) 107, 156, 300
BslFI GGGAC 2 cut(s) 637, 1704
BslI CCNNNNNNNGG 6 cut(s) 232, 306, 660, 1148, 1169, 1415
BsmAI GTCTC 4 cut(s) 131, 233, 637, 911
BsmBI CGTCTC 1 cut(s) 911
BsmFI GGGAC 2 cut(s) 637, 1704
BsmI GAATGC 1 cut(s) 220
BsnI GGCC 4 cut(s) 119, 208, 1408, 1708
Bso31I GGTCTC 1 cut(s) 637
BsoBI CYCGRG 1 cut(s) 1520
Bsp1286I GDGCHC 4 cut(s) 163, 1135, 1484, 1828
Bsp143I GATC 8 cut(s) 192, 295, 309, 368, 398, 694, 1609, 1646
Bsp19I CCATGG 1 cut(s) 513
BspACI CCGC 3 cut(s) 153, 742, 853
BspANI GGCC 4 cut(s) 119, 208, 1408, 1708
BspCNI CTCAG 7 cut(s) 154, 202, 357, 469, 619, 759, 1031
BspFNI CGCG 1 cut(s) 855
BspLI GGNNCC 4 cut(s) 256, 311, 723, 1540
BspMAI CTGCAG 2 cut(s) 397, 1195
BspOI GCTAGC 1 cut(s) 1355
BspPI GGATC 6 cut(s) 187, 290, 304, 317, 406, 689
BspT107I GGYRCC 3 cut(s) 254, 721, 1538
BspTNI GGTCTC 1 cut(s) 637
BsrFI RCCGGY 1 cut(s) 106
BsrI ACTGG 7 cut(s) 258, 274, 1096, 1183, 1222, 1502, 1829
BssAI RCCGGY 1 cut(s) 106
BssECI CCNNGG 6 cut(s) 120, 513, 1203, 1342, 1409, 1593
BssMI GATC 8 cut(s) 192, 295, 309, 368, 398, 694, 1609, 1646
BssSI CACGAG 1 cut(s) 314
BssT1I CCWWGG 5 cut(s) 120, 513, 1342, 1409, 1593
Bst2BI CACGAG 1 cut(s) 314
Bst4CI ACNGT 6 cut(s) 505, 667, 769, 836, 1449, 1552
Bst6I CTCTTC 1 cut(s) 726
BstAPI GCANNNNNTGC 1 cut(s) 1199
BstC8I GCNNGC 6 cut(s) 174, 265, 873, 1353, 1587, 1671
BstDEI CTNAG 8 cut(s) 141, 189, 344, 477, 627, 746, 1018, 1461
BstDSI CCRYGG 2 cut(s) 513, 1203
BstENI CCTNNNNNAGG 2 cut(s) 1167, 1413
BstF5I GGATG 3 cut(s) 256, 298, 1396
BstFNI CGCG 1 cut(s) 855
BstH2I RGCGCY 3 cut(s) 107, 179, 537
BstHHI GCGC 5 cut(s) 106, 172, 178, 536, 1120
BstKTI GATC 8 cut(s) 195, 298, 312, 371, 401, 697, 1612, 1649
BstMAI GTCTC 4 cut(s) 131, 233, 637, 911
BstMBI GATC 8 cut(s) 192, 295, 309, 368, 398, 694, 1609, 1646
BstMCI CGRYCG 1 cut(s) 209
BstSCI CCNGG 1 cut(s) 298
BstSFI CTRYAG 3 cut(s) 10, 393, 1191
BstUI CGCG 1 cut(s) 855
BstV2I GAAGAC 1 cut(s) 980
BstX2I RGATCY 4 cut(s) 192, 309, 398, 694
BstYI RGATCY 4 cut(s) 192, 309, 398, 694
BstZI CGGCCG 1 cut(s) 206
BsuRI GGCC 4 cut(s) 119, 208, 1408, 1708
BtgI CCRYGG 2 cut(s) 513, 1203
BtsCI GGATG 3 cut(s) 256, 298, 1396
BtsI GCAGTG 3 cut(s) 555, 1362, 1482
Cac8I GCNNGC 6 cut(s) 174, 265, 873, 1353, 1587, 1671
CaiI CAGNNNCTG 2 cut(s) 671, 1199
CfoI GCGC 5 cut(s) 106, 172, 178, 536, 1120
Cfr10I RCCGGY 1 cut(s) 106
Cfr13I GGNCC 1 cut(s) 276
CseI GACGC 3 cut(s) 612, 844, 1723
Csp6I GTAC 1 cut(s) 128
CviAII CATG 5 cut(s) 422, 514, 545, 940, 1543
CviQI GTAC 1 cut(s) 128
DdeI CTNAG 8 cut(s) 141, 189, 344, 477, 627, 746, 1018, 1461
DpnI GATC 8 cut(s) 194, 297, 311, 370, 400, 696, 1611, 1648
DpnII GATC 8 cut(s) 192, 295, 309, 368, 398, 694, 1609, 1646
DraI TTTAAA 1 cut(s) 1753
DrdI GACNNNNNNGTC 1 cut(s) 208
DriI GACNNNNNGTC 1 cut(s) 854
DseDI GACNNNNNNGTC 1 cut(s) 208
EaeI YGGCCR 1 cut(s) 206
EagI CGGCCG 1 cut(s) 206
Eam1104I CTCTTC 1 cut(s) 726
Eam1105I GACNNNNNGTC 1 cut(s) 854
EarI CTCTTC 1 cut(s) 726
Ecl136II GAGCTC 1 cut(s) 161
EclXI CGGCCG 1 cut(s) 206
Eco130I CCWWGG 5 cut(s) 120, 513, 1342, 1409, 1593
Eco147I AGGCCT 2 cut(s) 1408, 1708
Eco24I GRGCYC 1 cut(s) 163
Eco31I GGTCTC 1 cut(s) 637
Eco32I GATATC 1 cut(s) 678
Eco47I GGWCC 1 cut(s) 276
Eco52I CGGCCG 1 cut(s) 206
Eco53kI GAGCTC 1 cut(s) 161
Eco57I CTGAAG 3 cut(s) 404, 1491, 1695
Eco88I CYCGRG 1 cut(s) 1520
EcoICRI GAGCTC 1 cut(s) 161
EcoNI CCTNNNNNAGG 2 cut(s) 1167, 1413
EcoRI GAATTC 1 cut(s) 49
EcoRV GATATC 1 cut(s) 678
EcoT14I CCWWGG 5 cut(s) 120, 513, 1342, 1409, 1593
EcoT38I GRGCYC 1 cut(s) 163
ErhI CCWWGG 5 cut(s) 120, 513, 1342, 1409, 1593
Esp3I CGTCTC 1 cut(s) 911
FaeI CATG 5 cut(s) 425, 517, 548, 943, 1546
FalI AAGNNNNNCTT 4 cut(s) 1485, 1517, 1859, 1891
FaqI GGGAC 2 cut(s) 637, 1704
FatI CATG 5 cut(s) 421, 513, 544, 939, 1542
FblI GTMKAC 1 cut(s) 1872
FokI GGATG 3 cut(s) 263, 305, 1403
FriOI GRGCYC 1 cut(s) 163
FspBI CTAG 7 cut(s) 353, 1100, 1136, 1284, 1352, 1565, 1760
FspI TGCGCA 1 cut(s) 1119
GlaI GCGC 5 cut(s) 105, 171, 177, 535, 1119
GsaI CCCAGC 2 cut(s) 1257, 1662
HaeII RGCGCY 3 cut(s) 107, 179, 537
HaeIII GGCC 4 cut(s) 119, 208, 1408, 1708
HapII CCGG 3 cut(s) 107, 156, 300
HgaI GACGC 3 cut(s) 612, 844, 1723
HhaI GCGC 5 cut(s) 106, 172, 178, 536, 1120
Hin1II CATG 5 cut(s) 425, 517, 548, 943, 1546
Hin6I GCGC 5 cut(s) 104, 170, 176, 534, 1118
HinP1I GCGC 5 cut(s) 104, 170, 176, 534, 1118
HincII GTYRAC 1 cut(s) 1642
HindII GTYRAC 1 cut(s) 1642
HinfI GANTC 9 cut(s) 139, 187, 202, 650, 704, 1290, 1457, 1725, 1775
HpaII CCGG 3 cut(s) 107, 156, 300
HphI GGTGA 2 cut(s) 173, 821
Hpy166II GTNNAC 2 cut(s) 1642, 1873
Hpy188I TCNGA 9 cut(s) 144, 192, 292, 495, 628, 637, 1609, 1651, 1780
Hpy188III TCNNGA 8 cut(s) 230, 436, 590, 1374, 1493, 1509, 1760, 1895
Hpy8I GTNNAC 2 cut(s) 1642, 1873
Hpy99I CGWCG 2 cut(s) 214, 860
HpyCH4III ACNGT 6 cut(s) 505, 667, 769, 836, 1449, 1552
HpyF3I CTNAG 8 cut(s) 141, 189, 344, 477, 627, 746, 1018, 1461
Hsp92II CATG 5 cut(s) 425, 517, 548, 943, 1546
HspAI GCGC 5 cut(s) 104, 170, 176, 534, 1118
Kzo9I GATC 8 cut(s) 192, 295, 309, 368, 398, 694, 1609, 1646
LmnI GCTCC 9 cut(s) 158, 228, 428, 455, 1111, 1144, 1172, 1247, 1823
LweI GCATC 8 cut(s) 62, 427, 529, 832, 1247, 1613, 1656, 1849
MaeI CTAG 7 cut(s) 353, 1100, 1136, 1284, 1352, 1565, 1760
MaeIII GTNAC 5 cut(s) 42, 79, 1213, 1597, 1711
MalI GATC 8 cut(s) 194, 297, 311, 370, 400, 696, 1611, 1648
MboI GATC 8 cut(s) 192, 295, 309, 368, 398, 694, 1609, 1646
MfeI CAATTG 2 cut(s) 1113, 1836
MflI RGATCY 4 cut(s) 192, 309, 398, 694
MhlI GDGCHC 4 cut(s) 163, 1135, 1484, 1828
MlyI GAGTC 5 cut(s) 133, 181, 196, 659, 1466
MseI TTAA 5 cut(s) 87, 950, 1064, 1556, 1752
MslI CAYNNNNRTG 1 cut(s) 1450
MspA1I CMGCKG 1 cut(s) 1058
MspI CCGG 3 cut(s) 107, 156, 300
MspR9I CCNGG 1 cut(s) 300
MunI CAATTG 2 cut(s) 1113, 1836
Mva1269I GAATGC 1 cut(s) 220
MvnI CGCG 1 cut(s) 855
NciI CCSGG 1 cut(s) 300
NcoI CCATGG 1 cut(s) 513
NdeII GATC 8 cut(s) 192, 295, 309, 368, 398, 694, 1609, 1646
NheI GCTAGC 1 cut(s) 1351
NlaIII CATG 5 cut(s) 425, 517, 548, 943, 1546
NlaIV GGNNCC 4 cut(s) 256, 311, 723, 1540
NmeAIII GCCGAG 1 cut(s) 184
NmuCI GTSAC 2 cut(s) 79, 1711
NsbI TGCGCA 1 cut(s) 1119
OliI CACNNNNGTG 1 cut(s) 1450
PaeR7I CTCGAG 1 cut(s) 1520
PceI AGGCCT 2 cut(s) 1408, 1708
PcsI WCGNNNNNNNCGW 1 cut(s) 620
PctI GAATGC 1 cut(s) 220
PfeI GAWTC 4 cut(s) 704, 1290, 1725, 1775
PleI GAGTC 5 cut(s) 133, 181, 196, 658, 1465
PpsI GAGTC 5 cut(s) 133, 181, 196, 658, 1465
PsiI TTATAA 1 cut(s) 1338
Psp124BI GAGCTC 1 cut(s) 163
PspFI CCCAGC 2 cut(s) 1253, 1658
PspN4I GGNNCC 4 cut(s) 256, 311, 723, 1540
PspPI GGNCC 1 cut(s) 276
PspXI VCTCGAGB 1 cut(s) 1520
PstI CTGCAG 2 cut(s) 397, 1195
PstNI CAGNNNCTG 2 cut(s) 671, 1199
PsuI RGATCY 4 cut(s) 192, 309, 398, 694
PvuII CAGCTG 1 cut(s) 1058
RsaI GTAC 1 cut(s) 129
RsaNI GTAC 1 cut(s) 128
RseI CAYNNNNRTG 1 cut(s) 1450
SacI GAGCTC 1 cut(s) 163
SaqAI TTAA 5 cut(s) 87, 950, 1064, 1556, 1752
Sau3AI GATC 8 cut(s) 192, 295, 309, 368, 398, 694, 1609, 1646
Sau96I GGNCC 1 cut(s) 276
ScaI AGTACT 1 cut(s) 129
SchI GAGTC 5 cut(s) 133, 181, 196, 659, 1466
ScrFI CCNGG 1 cut(s) 300
SduI GDGCHC 4 cut(s) 163, 1135, 1484, 1828
SfaNI GCATC 8 cut(s) 62, 427, 529, 832, 1247, 1613, 1656, 1849
SfcI CTRYAG 3 cut(s) 10, 393, 1191
Sfr274I CTCGAG 1 cut(s) 1520
SinI GGWCC 1 cut(s) 276
SlaI CTCGAG 1 cut(s) 1520
SmiMI CAYNNNNRTG 1 cut(s) 1450
SmlI CTYRAG 3 cut(s) 230, 716, 1520
SmoI CTYRAG 3 cut(s) 230, 716, 1520
SpeI ACTAGT 1 cut(s) 1564
SseBI AGGCCT 2 cut(s) 1408, 1708
SsiI CCGC 3 cut(s) 153, 742, 853
SspMI CTAG 7 cut(s) 353, 1100, 1136, 1284, 1352, 1565, 1760
SstI GAGCTC 1 cut(s) 163
StuI AGGCCT 2 cut(s) 1408, 1708
StyD4I CCNGG 1 cut(s) 298
StyI CCWWGG 5 cut(s) 120, 513, 1342, 1409, 1593
TaaI ACNGT 6 cut(s) 505, 667, 769, 836, 1449, 1552
TaqI TCGA 4 cut(s) 70, 212, 847, 1521
TatI WGTACW 1 cut(s) 127
TauI GCSGC 2 cut(s) 155, 745
TfiI GAWTC 4 cut(s) 704, 1290, 1725, 1775
Tru1I TTAA 5 cut(s) 87, 950, 1064, 1556, 1752
Tru9I TTAA 5 cut(s) 87, 950, 1064, 1556, 1752
TseFI GTSAC 2 cut(s) 79, 1711
Tsp45I GTSAC 2 cut(s) 79, 1711
TspDTI ATGAA 8 cut(s) 17, 585, 591, 717, 928, 1407, 1544, 1860
TspGWI ACGGA 3 cut(s) 30, 629, 1879
VpaK11BI GGWCC 1 cut(s) 276
XagI CCTNNNNNAGG 2 cut(s) 1167, 1413
XapI RAATTY 5 cut(s) 5, 49, 596, 1307, 1465
XbaI TCTAGA 1 cut(s) 1759
XcmI CCANNNNNNNNNTGG 2 cut(s) 320, 1902
XhoI CTCGAG 1 cut(s) 1520
XmiI GTMKAC 1 cut(s) 1872
XspI CTAG 7 cut(s) 353, 1100, 1136, 1284, 1352, 1565, 1760
ZrmI AGTACT 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.