FvH4_2g39580

Adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0015120
Physical Location & Seq
Reverse (-)
28397699 .. 28400624
2926 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g39580.t2

Sequence Viewer

Length: 1065 bp
ATGGGATTAGAAGCCACCTTGCTCACCAACTCCAACAGCGGCGAGGCTCCTCTGATCCTCGGACTTCAAGCCGCCGCCCTCGTCGACCACGTGGCTCGCGTCGACCGGTCCTTGCTCGACCAACTCCCCGGCGAGCGCGGTGGCTCCACCCCCGTTGGAATTGAGGAGCTTGAGCATATATTGAGAGAGGTGAAGACCCATGGTATATCATCCCCTGATGAATCTTTGCCTATGAAAACTATGGCCGGTGGAAGTGTGGCCAATACTATTAGAGGGTTGAGTGCAGGGTTTGGAATCTCTTGTGGGATCATTGGTGCATGTGGTGATGATGAGCAAGGCCAGCTGTTTGTTAGTAACATGAACTCTCATGATGTGAACCTTGAGAGGTTGAGGATGAAGAAGGGACCCACAGCTCAGTGTGTTTGCTTGGTTGATGCGTCAGGCAATCGGACAATGCGTCCATGTCTATCTAGTGCGGTGAAACTTCACCCAAAGGAGGATGACTTGACAAGAGCGGATTTTAAAGGATGCAAGGCAGCTATACAGGTCGCCAAGAAAGAAGGTCTTCTTGTGTCCTTGGATTTGGCCAGCTTTGAGATGGTTCGCAACTATAAATCACCTCTTGTACAGTTGCTGGAGTCAGGTAATATAGACCTCTGCTTTGCCAATGAGGATGAAGCAACGGAGCTGCTAAGAGGTTGTAATGGTGACCAAGATGCTGATCCTGTGGCTGCACTCGAATTTTTGGGGAAACACTGCCGGTGGGCAGTGGTAACATTAGGCAGTAATGGATGCATTGCAAAGCACGGAAAAGAGATTGTGAGAGTTCCAGCCATTGGGACAGCCAATGCAGTAGATGCCACCGGAGCAGGTGACTTGTTTGCCGGTGGGTTTTTGTACGGATTGGTGAAGGGATTATCTCTAGAGGACTGCTGCAAAGTTGGCTCGTGCAGTGGGGGAACTGTTATTCGTTCTCTTGGCGGTGAGGTGCCACCTGAGAGTTGGCAATGGATGTACAAGCAGATGCAGATCAAGGGCCTCCCTCTTCCGGACATCCAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PfkB

Protein Analysis

355

Amino Acids

37.41

Weight (kDa)

5.26

Isoelectric Point (pI)

32.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 79 - 345 1.2e-39 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015120)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19600
fragaria_vesca FvH4_2g39580 FvH4_2g39580 FvH4_2g39580
malus_domestica MD08G1029000.v1.1 MD15G1024500.v1.1
prunus_persica Prupe.1G376800_v2.0.a1 Prupe.1G376800_v2.0.a1
pyrus_communis pycom08g02280
rosa_chinensis RchiOBHm_Chr6g0301341
rosa_laevigata RLG00000011259
rosa_multiflora Rmu_sc0013354.1_g000023
rosa_roxburghii Rroxscaffold_7G00166900
rosa_rugosa Rorug06G0303800
rosa_samantha Rh6AG417400
rosa_wichuraiana Rw6G036120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 860
Acc36I ACCTGC 1 cut(s) 860
AccB1I GGYRCC 1 cut(s) 988
AccB7I CCANNNNNTGG 1 cut(s) 836
AccBSI CCGCTC 1 cut(s) 515
AccI GTMKAC 2 cut(s) 84, 102
AccII CGCG 2 cut(s) 99, 138
AccIII TCCGGA 1 cut(s) 1048
AciI CCGC 7 cut(s) 39, 72, 75, 138, 476, 515, 981
AclWI GGATC 3 cut(s) 49, 314, 716
AcoI YGGCCR 3 cut(s) 243, 258, 585
AcsI RAATTY 1 cut(s) 740
AcvI CACGTG 1 cut(s) 91
AfaI GTAC 3 cut(s) 627, 899, 1016
AfiI CCNNNNNNNGG 3 cut(s) 496, 836, 1048
AgeI ACCGGT 1 cut(s) 105
AgsI TTSAA 1 cut(s) 68
AhdI GACNNNNNGTC 1 cut(s) 456
AluBI AGCT 6 cut(s) 169, 343, 413, 539, 591, 688
AluI AGCT 6 cut(s) 169, 343, 413, 539, 591, 688
AlwI GGATC 3 cut(s) 49, 314, 716
AlwNI CAGNNNCTG 1 cut(s) 634
Aor13HI TCCGGA 1 cut(s) 1048
AoxI GGCC 5 cut(s) 243, 258, 337, 585, 1036
ApeKI GCWGC 4 cut(s) 536, 688, 731, 933
ApoI RAATTY 1 cut(s) 740
ArsI GACNNNNNNTTYG 2 cut(s) 644, 676
AsiGI ACCGGT 1 cut(s) 105
Asp700I GAANNNNTTC 1 cut(s) 564
AspLEI GCGC 1 cut(s) 138
AspS9I GGNCC 3 cut(s) 108, 404, 1036
AsuC2I CCSGG 1 cut(s) 129
AvaII GGWCC 2 cut(s) 108, 404
BalI TGGCCA 2 cut(s) 260, 587
BanI GGYRCC 1 cut(s) 988
BauI CACGAG 1 cut(s) 946
BbrPI CACGTG 1 cut(s) 91
BbsI GAAGAC 2 cut(s) 200, 557
BbvI GCAGC 4 cut(s) 548, 675, 718, 920
BccI CCATC 1 cut(s) 592
BcnI CCSGG 1 cut(s) 129
BfaI CTAG 2 cut(s) 471, 923
BfuAI ACCTGC 1 cut(s) 860
BisI GCNGC 7 cut(s) 40, 72, 75, 537, 689, 732, 934
BlsI GCNGC 7 cut(s) 41, 73, 76, 538, 690, 733, 935
Bme1390I CCNGG 1 cut(s) 129
Bme18I GGWCC 2 cut(s) 108, 404
BmeRI GACNNNNNGTC 1 cut(s) 456
BmgT120I GGNCC 3 cut(s) 108, 404, 1036
BmiI GGNNCC 5 cut(s) 48, 145, 405, 406, 990
BmrFI CCNGG 1 cut(s) 129
BmsI GCATC 6 cut(s) 424, 518, 706, 782, 847, 1014
BpiI GAAGAC 2 cut(s) 200, 557
BpmI CTGGAG 1 cut(s) 656
BpuEI CTTGAG 2 cut(s) 191, 401
BpuMI CCSGG 1 cut(s) 129
BsaAI YACGTR 1 cut(s) 91
BsaBI GATNNNNATC 2 cut(s) 720, 1028
BsaJI CCNNGG 4 cut(s) 58, 127, 199, 576
BsaWI WCCGGW 3 cut(s) 105, 863, 1048
Bsc4I CCNNNNNNNGG 3 cut(s) 496, 836, 1048
Bse118I RCCGGY 4 cut(s) 105, 245, 759, 884
Bse3DI GCAATG 2 cut(s) 795, 1013
Bse8I GATNNNNATC 2 cut(s) 720, 1028
BseAI TCCGGA 1 cut(s) 1048
BseDI CCNNGG 4 cut(s) 58, 127, 199, 576
BseGI GGATG 8 cut(s) 209, 399, 505, 533, 679, 797, 1017, 1053
BseJI GATNNNNATC 2 cut(s) 720, 1028
BseLI CCNNNNNNNGG 3 cut(s) 496, 836, 1048
BseMI GCAATG 2 cut(s) 795, 1013
BseMII CTCAG 2 cut(s) 428, 987
BseRI GAGGAG 2 cut(s) 39, 179
BseXI GCAGC 4 cut(s) 548, 675, 718, 920
BsgI GTGCAG 3 cut(s) 303, 717, 970
Bsh1236I CGCG 2 cut(s) 99, 138
Bsh1285I CGRYCG 1 cut(s) 106
BshFI GGCC 5 cut(s) 245, 260, 339, 587, 1038
BshNI GGYRCC 1 cut(s) 988
BshTI ACCGGT 1 cut(s) 105
BsiEI CGRYCG 1 cut(s) 106
BsiSI CCGG 7 cut(s) 106, 129, 246, 760, 864, 885, 1049
BslFI GGGAC 2 cut(s) 417, 853
BslI CCNNNNNNNGG 3 cut(s) 496, 836, 1048
BsmFI GGGAC 2 cut(s) 417, 853
BsnI GGCC 5 cut(s) 245, 260, 339, 587, 1038
Bsp13I TCCGGA 1 cut(s) 1048
Bsp1407I TGTACA 2 cut(s) 625, 1014
Bsp143I GATC 4 cut(s) 54, 306, 721, 1029
Bsp19I CCATGG 1 cut(s) 199
BspACI CCGC 7 cut(s) 39, 72, 75, 138, 476, 515, 981
BspANI GGCC 5 cut(s) 245, 260, 339, 587, 1038
BspCNI CTCAG 2 cut(s) 427, 988
BspEI TCCGGA 1 cut(s) 1048
BspFNI CGCG 2 cut(s) 99, 138
BspHI TCATGA 1 cut(s) 367
BspLI GGNNCC 5 cut(s) 48, 145, 405, 406, 990
BspMI ACCTGC 1 cut(s) 860
BspPI GGATC 3 cut(s) 49, 314, 716
BspT107I GGYRCC 1 cut(s) 988
BsrBI CCGCTC 1 cut(s) 515
BsrDI GCAATG 2 cut(s) 795, 1013
BsrFI RCCGGY 4 cut(s) 105, 245, 759, 884
BsrGI TGTACA 2 cut(s) 625, 1014
BssAI RCCGGY 4 cut(s) 105, 245, 759, 884
BssECI CCNNGG 4 cut(s) 58, 127, 199, 576
BssMI GATC 4 cut(s) 54, 306, 721, 1029
BssSI CACGAG 1 cut(s) 946
BssT1I CCWWGG 2 cut(s) 199, 576
Bst2BI CACGAG 1 cut(s) 946
Bst4CI ACNGT 2 cut(s) 630, 964
Bst6I CTCTTC 1 cut(s) 1050
BstAPI GCANNNNNTGC 1 cut(s) 857
BstAUI TGTACA 2 cut(s) 625, 1014
BstBAI YACGTR 1 cut(s) 91
BstC8I GCNNGC 4 cut(s) 97, 134, 341, 589
BstDEI CTNAG 3 cut(s) 414, 692, 996
BstDSI CCRYGG 1 cut(s) 199
BstEII GGTNACC 1 cut(s) 707
BstF5I GGATG 8 cut(s) 209, 399, 505, 533, 679, 797, 1017, 1053
BstFNI CGCG 2 cut(s) 99, 138
BstHHI GCGC 1 cut(s) 138
BstKTI GATC 4 cut(s) 57, 309, 724, 1032
BstMBI GATC 4 cut(s) 54, 306, 721, 1029
BstMCI CGRYCG 1 cut(s) 106
BstMWI GCNNNNNNNGC 4 cut(s) 340, 857, 866, 942
BstNSI RCATGY 1 cut(s) 321
BstPI GGTNACC 1 cut(s) 707
BstSCI CCNGG 1 cut(s) 127
BstUI CGCG 2 cut(s) 99, 138
BstV1I GCAGC 4 cut(s) 548, 675, 718, 920
BstV2I GAAGAC 2 cut(s) 200, 557
BsuRI GGCC 5 cut(s) 245, 260, 339, 587, 1038
BtgI CCRYGG 1 cut(s) 199
BtsCI GGATG 8 cut(s) 209, 399, 505, 533, 679, 797, 1017, 1053
BtsI GCAGTG 3 cut(s) 754, 774, 958
BtsIMutI CAGTG 4 cut(s) 422, 754, 774, 958
BveI ACCTGC 1 cut(s) 860
Cac8I GCNNGC 4 cut(s) 97, 134, 341, 589
CaiI CAGNNNCTG 1 cut(s) 634
CciI TCATGA 1 cut(s) 367
CfoI GCGC 1 cut(s) 138
Cfr10I RCCGGY 4 cut(s) 105, 245, 759, 884
Cfr13I GGNCC 3 cut(s) 108, 404, 1036
CseI GACGC 3 cut(s) 88, 426, 446
Csp6I GTAC 3 cut(s) 626, 898, 1015
CspAI ACCGGT 1 cut(s) 105
CspCI CAANNNNNGTGG 2 cut(s) 136, 171
CviAII CATG 5 cut(s) 200, 318, 358, 368, 462
CviQI GTAC 3 cut(s) 626, 898, 1015
DdeI CTNAG 3 cut(s) 414, 692, 996
DpnI GATC 4 cut(s) 56, 308, 723, 1031
DpnII GATC 4 cut(s) 54, 306, 721, 1029
DraI TTTAAA 1 cut(s) 523
DriI GACNNNNNGTC 1 cut(s) 456
EaeI YGGCCR 3 cut(s) 243, 258, 585
Eam1104I CTCTTC 1 cut(s) 1050
Eam1105I GACNNNNNGTC 1 cut(s) 456
EarI CTCTTC 1 cut(s) 1050
Eco130I CCWWGG 2 cut(s) 199, 576
Eco47I GGWCC 2 cut(s) 108, 404
Eco72I CACGTG 1 cut(s) 91
Eco91I GGTNACC 1 cut(s) 707
EcoO109I RGGNCCY 2 cut(s) 404, 1036
EcoO65I GGTNACC 1 cut(s) 707
EcoT14I CCWWGG 2 cut(s) 199, 576
EcoT22I ATGCAT 1 cut(s) 797
ErhI CCWWGG 2 cut(s) 199, 576
FaeI CATG 5 cut(s) 203, 321, 361, 371, 465
FalI AAGNNNNNCTT 4 cut(s) 549, 581, 552, 584
FaqI GGGAC 2 cut(s) 417, 853
FatI CATG 5 cut(s) 199, 317, 357, 367, 461
FblI GTMKAC 2 cut(s) 84, 102
Fnu4HI GCNGC 7 cut(s) 40, 72, 75, 537, 689, 732, 934
FokI GGATG 8 cut(s) 196, 406, 512, 540, 686, 804, 1024, 1040
Fsp4HI GCNGC 7 cut(s) 40, 72, 75, 537, 689, 732, 934
FspBI CTAG 2 cut(s) 471, 923
GlaI GCGC 1 cut(s) 137
GluI GCNGC 7 cut(s) 40, 72, 75, 537, 689, 732, 934
GsuI CTGGAG 1 cut(s) 656
HaeIII GGCC 5 cut(s) 245, 260, 339, 587, 1038
HapII CCGG 7 cut(s) 106, 129, 246, 760, 864, 885, 1049
HgaI GACGC 3 cut(s) 88, 426, 446
HhaI GCGC 1 cut(s) 138
Hin1II CATG 5 cut(s) 203, 321, 361, 371, 465
Hin6I GCGC 1 cut(s) 136
HinP1I GCGC 1 cut(s) 136
HincII GTYRAC 2 cut(s) 85, 103
HindII GTYRAC 2 cut(s) 85, 103
HinfI GANTC 3 cut(s) 221, 294, 638
HpaII CCGG 7 cut(s) 106, 129, 246, 760, 864, 885, 1049
Hpy166II GTNNAC 3 cut(s) 85, 103, 376
Hpy188I TCNGA 3 cut(s) 54, 62, 450
Hpy188III TCNNGA 3 cut(s) 368, 923, 1049
Hpy8I GTNNAC 3 cut(s) 85, 103, 376
Hpy99I CGWCG 2 cut(s) 86, 104
HpyAV CCTTC 3 cut(s) 394, 554, 904
HpyCH4III ACNGT 2 cut(s) 630, 964
HpyCH4IV ACGT 1 cut(s) 90
HpyF10VI GCNNNNNNNGC 4 cut(s) 340, 857, 866, 942
HpyF3I CTNAG 3 cut(s) 414, 692, 996
HpySE526I ACGT 1 cut(s) 90
Hsp92II CATG 5 cut(s) 203, 321, 361, 371, 465
HspAI GCGC 1 cut(s) 136
KflI GGGWCCC 1 cut(s) 404
Kpn2I TCCGGA 1 cut(s) 1048
Kzo9I GATC 4 cut(s) 54, 306, 721, 1029
LmnI GCTCC 5 cut(s) 52, 149, 166, 685, 866
Lsp1109I GCAGC 4 cut(s) 548, 675, 718, 920
LweI GCATC 6 cut(s) 424, 518, 706, 782, 847, 1014
MaeI CTAG 2 cut(s) 471, 923
MaeII ACGT 1 cut(s) 90
MaeIII GTNAC 4 cut(s) 353, 707, 772, 872
MalI GATC 4 cut(s) 56, 308, 723, 1031
MbiI CCGCTC 1 cut(s) 515
MboI GATC 4 cut(s) 54, 306, 721, 1029
MboII GAAGA 4 cut(s) 205, 409, 557, 1037
MlsI TGGCCA 2 cut(s) 260, 587
MluCI AATT 2 cut(s) 159, 740
MluNI TGGCCA 2 cut(s) 260, 587
MlyI GAGTC 1 cut(s) 647
MmeI TCCRAC 2 cut(s) 57, 136
Mox20I TGGCCA 2 cut(s) 260, 587
Mph1103I ATGCAT 1 cut(s) 797
MroI TCCGGA 1 cut(s) 1048
MroXI GAANNNNTTC 1 cut(s) 564
MscI TGGCCA 2 cut(s) 260, 587
MseI TTAA 1 cut(s) 522
Msp20I TGGCCA 2 cut(s) 260, 587
MspA1I CMGCKG 2 cut(s) 39, 343
MspI CCGG 7 cut(s) 106, 129, 246, 760, 864, 885, 1049
MspR9I CCNGG 1 cut(s) 129
MvnI CGCG 2 cut(s) 99, 138
MwoI GCNNNNNNNGC 4 cut(s) 340, 857, 866, 942
NciI CCSGG 1 cut(s) 129
NcoI CCATGG 1 cut(s) 199
NdeII GATC 4 cut(s) 54, 306, 721, 1029
NlaIII CATG 5 cut(s) 203, 321, 361, 371, 465
NlaIV GGNNCC 5 cut(s) 48, 145, 405, 406, 990
NmuCI GTSAC 2 cut(s) 707, 872
NsiI ATGCAT 1 cut(s) 797
NspI RCATGY 1 cut(s) 321
PagI TCATGA 1 cut(s) 367
PaqCI CACCTGC 1 cut(s) 860
PcsI WCGNNNNNNNCGW 3 cut(s) 87, 96, 454
PdmI GAANNNNTTC 1 cut(s) 564
PfeI GAWTC 2 cut(s) 221, 294
PflMI CCANNNNNTGG 1 cut(s) 836
PinAI ACCGGT 1 cut(s) 105
PkrI GCNGC 7 cut(s) 41, 73, 76, 538, 690, 733, 935
PleI GAGTC 1 cut(s) 646
PmaCI CACGTG 1 cut(s) 91
PmlI CACGTG 1 cut(s) 91
PpsI GAGTC 1 cut(s) 646
Ppu21I YACGTR 1 cut(s) 91
PpuMI RGGWCCY 1 cut(s) 404
Psp5II RGGWCCY 1 cut(s) 404
PspCI CACGTG 1 cut(s) 91
PspEI GGTNACC 1 cut(s) 707
PspN4I GGNNCC 5 cut(s) 48, 145, 405, 406, 990
PspPI GGNCC 3 cut(s) 108, 404, 1036
PspPPI RGGWCCY 1 cut(s) 404
PstNI CAGNNNCTG 1 cut(s) 634
PvuII CAGCTG 1 cut(s) 343
RsaI GTAC 3 cut(s) 627, 899, 1016
RsaNI GTAC 3 cut(s) 626, 898, 1015
SalI GTCGAC 2 cut(s) 83, 101
SaqAI TTAA 1 cut(s) 522
SatI GCNGC 7 cut(s) 40, 72, 75, 537, 689, 732, 934
Sau3AI GATC 4 cut(s) 54, 306, 721, 1029
Sau96I GGNCC 3 cut(s) 108, 404, 1036
SchI GAGTC 1 cut(s) 647
ScrFI CCNGG 1 cut(s) 129
SfaNI GCATC 6 cut(s) 424, 518, 706, 782, 847, 1014
SinI GGWCC 2 cut(s) 108, 404
SmlI CTYRAG 2 cut(s) 170, 380
SmoI CTYRAG 2 cut(s) 170, 380
Sse9I AATT 2 cut(s) 159, 740
SsiI CCGC 7 cut(s) 39, 72, 75, 138, 476, 515, 981
SspMI CTAG 2 cut(s) 471, 923
StyD4I CCNGG 1 cut(s) 127
StyI CCWWGG 2 cut(s) 199, 576
TaaI ACNGT 2 cut(s) 630, 964
TaiI ACGT 1 cut(s) 93
TaqI TCGA 4 cut(s) 84, 102, 117, 738
TasI AATT 2 cut(s) 159, 740
TatI WGTACW 2 cut(s) 625, 1014
TauI GCSGC 3 cut(s) 42, 74, 77
TfiI GAWTC 2 cut(s) 221, 294
Tru1I TTAA 1 cut(s) 522
Tru9I TTAA 1 cut(s) 522
TscAI CASTG 4 cut(s) 422, 761, 774, 958
TseFI GTSAC 2 cut(s) 707, 872
TseI GCWGC 4 cut(s) 536, 688, 731, 933
Tsp45I GTSAC 2 cut(s) 707, 872
TspDTI ATGAA 5 cut(s) 234, 248, 374, 410, 690
TspGWI ACGGA 3 cut(s) 698, 822, 915
TspRI CASTG 4 cut(s) 422, 761, 774, 958
Van91I CCANNNNNTGG 1 cut(s) 836
VpaK11BI GGWCC 2 cut(s) 108, 404
XapI RAATTY 1 cut(s) 740
XbaI TCTAGA 1 cut(s) 922
XceI RCATGY 1 cut(s) 321
XcmI CCANNNNNNNNNTGG 2 cut(s) 595, 999
XmiI GTMKAC 2 cut(s) 84, 102
XmnI GAANNNNTTC 1 cut(s) 564
XspI CTAG 2 cut(s) 471, 923
Zsp2I ATGCAT 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.