Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0008610

Physical Location & Seq

Genomic Coordinates Reverse (-)

280370 .. 285649

Gene Structure 5280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g00550.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGGTCGTTCTCGTGGAAACTTTCATTCCGACGAGGACCCCACTCAGAGATCAAGGAGGAAGAAGAATGCATCCAGTGGAGAAAATTTAGAATCTTTAGCTGCAGGTCAAGGGAAGAGCGAAGGAAAAAGGGCTTATCACTGCAATTATTGCAACAAAGACATTACGGGGAAGATCCGAATCAAGTGCAATTATTGCCCTGATTTTGACCTATGTATAGAGTGTTTCTCTGTGGGAGCAGAGCTAACATCTCATAAAAGCAATCACCCTTACCAAGTTTTGGACAATCTGTCTTTCCCACTTATCTGCCCAGACTGGAATGCAGATGACGAAATACTGCTTCTGGAGGCAACTGAAATGTATGGACTGGGGAACTGGGCTGAGGTTGCTGAGCATGTTGGGACAAAGAGTAAAGAACAATGTATAGAACACTATACAAATGTCTATTTGAACTCTCCATACTTTCCTCTGCCGGACATGTCTCACGTTGTTGGAAAAAATAGAAAGGAGCTTCTTGCTATGGCTAAAGGGCATGGGGAGGACAAAAAAGGATTTCCTATGCTTGGGGATCACAATGTGAAGGAGGAATCTCCATTTTCTCCTTCAAGGATCAAAGTGGAAGATTCACACAAAGGTGGCCCCTCTAGCCGTTTACTGTCCAGCATCAACACTGATGCAGAATCTGGAGTTCGCTCTAGTGGTGTGGCAGCAATAGCTGGTCACAAGAAGCCATCCAACATGACACAGGTTAAAGATGGTCCTGGTGTCTTTAAAGTGGAAGAACCTCAAGTTGGGAGGAAAGGCAAGAGACCAAGTTCTTTGGTGAATGAGGGTCCTTCTTTAGTTGAGAGTGGTTATAACCCCAAAAGGCAGGAGTTTGATCCTGAATATGATAACGATTCTGAACAGTTGTTGGCTGATATGGAATTTAAGGATAATGACACTGAGGATGAGCGTGAGTTGAAACTAAGAGTTCTGCGAATCTATGCAAAGAGACTTGATGAGAGGAAGCGTAGAAAGGATTTCATACTAGAAAGAAATTTATTATATCCAAATCCTTTTGAAAAGGACCTAAATCCGGAAGAAATCGCGATATGTCGACGTTATGAGGTCTTCATGTGCTTCCACTCCAAGGAAGAGCATGCAGAATTACTTCAAACTGTTATTGCAGAGCATCGAACTCGGAAAAGGATCCAAGAACTTAAGGAAGCCCGAAATGCTGGTTGCCGTACATCAGCTGAGGCAGATAGATATCTTGAACAAAAAAGGAAAAGAGAAGCTGATGAAAATGCTCGCAGAGCAAAGGAAAGTGGTGAGGTTGGCCCAAGTGGTCAGGCAGGTCCCAATTTAAGCTCTGCCAGTGAACTGGATATATTGGGTGTTTATGGATCAGATTTACTGTCTGAAGCTGAGAAACGTCTCTGCAGCGAAATGGGGTTACCCCCGCCTGTTTACCTTAAGATGGAAGAAGTCATGTCAATTGAAATCTTCAGCGGCAATGTCACCAAAAGATCAGATGCCCATCACCTGTTCAAGATTGAACCTAGTAAAATCGACAGGGTCTACGACATGCTCGTGAAAAAGGGGATAGCACAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003682 GO:0003700 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006950 GO:0006996 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009631 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0031056 GO:0031058 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0033043 GO:0033044 GO:0035065 GO:0035066 GO:0042127 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0140110 GO:1901983 GO:1901985 GO:1902275 GO:1902680 GO:1903506 GO:1903508 GO:1905269 GO:2000112 GO:2000756 GO:2000758 GO:2001141 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding ZZ

Protein Analysis

534

Amino Acids

60.17

Weight (kDa)

6.2

Isoelectric Point (pI)

53.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZZ	PF00569	68 - 102	2.6e-08	Zinc finger, ZZ type
ZZ_ADA2	PF25299	72 - 118	3.1e-15	ADA2 ZZ-type zing finger
Myb_DNA-binding	PF00249	129 - 172	1.4e-11	Myb-like DNA-binding domain
TADA2A-like_3rd	PF22941	308 - 379	8.4e-27	Transcriptional adapter 2-alpha-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16420 AT4G16420 AT4G16420
fragaria_vesca	FvH4_3g00550 FvH4_3g00550
malus_domestica	MD00G1057900.v1.1 MD10G1336800.v1.1
prunus_persica	Prupe.4G006600_v2.0.a1 Prupe.4G006600_v2.0.a1 Prupe.4G006600_v2.0.a1
pyrus_communis	pycom05g32620 pycom10g28630
rosa_chinensis	RchiOBHm_Chr5g0000751
rosa_laevigata	RLG00000030892
rosa_roxburghii	Rroxscaffold_1G00075480
rosa_rugosa	Rorug04G0386200 Rorug04G0386200
rosa_samantha	Rh1BG031800 Rh5AG006200 Rh5BG008000 Rh5CG006700 Rh5DG006700
rosa_wichuraiana	Rw5G000630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	858
Acc36I	ACCTGC	2 cut(s)	95, 1328
AccB7I	CCANNNNNTGG	1 cut(s)	280
AccI	GTMKAC	2 cut(s)	1099, 1563
AccII	CGCG	1 cut(s)	1091
AccIII	TCCGGA	1 cut(s)	1078
AciI	CCGC	2 cut(s)	1445, 1494
AclWI	GGATC	7 cut(s)	169, 576, 617, 875, 1186, 1199, 1396
AcsI	RAATTY	3 cut(s)	85, 926, 1039
AcuI	CTGAAG	2 cut(s)	1425, 1474
AdeI	CACNNNGTG	1 cut(s)	577
AfaI	GTAC	1 cut(s)	1231
AfiI	CCNNNNNNNGG	6 cut(s)	280, 563, 791, 1078, 1132, 1462
AflII	CTTAAG	2 cut(s)	1202, 1457
AflIII	ACRYGT	1 cut(s)	477
AgsI	TTSAA	9 cut(s)	451, 606, 964, 1064, 1157, 1259, 1484, 1534, 1541
AhdI	GACNNNNNGTC	1 cut(s)	289
AjnI	CCWGG	1 cut(s)	760
AjuI	GAANNNNNNNTTGG	2 cut(s)	774, 806
AleI	CACNNNNGTG	1 cut(s)	633
AluBI	AGCT	8 cut(s)	101, 244, 511, 716, 1238, 1280, 1353, 1409
AluI	AGCT	8 cut(s)	101, 244, 511, 716, 1238, 1280, 1353, 1409
Alw26I	GTCTC	4 cut(s)	486, 802, 988, 1424
AlwI	GGATC	7 cut(s)	169, 576, 617, 875, 1186, 1199, 1396
AlwNI	CAGNNNCTG	1 cut(s)	683
Aor13HI	TCCGGA	1 cut(s)	1078
AoxI	GGCC	2 cut(s)	637, 1321
ApeKI	GCWGC	3 cut(s)	101, 707, 1425
ApoI	RAATTY	3 cut(s)	85, 926, 1039
Asp700I	GAANNNNTTC	1 cut(s)	1152
AspS9I	GGNCC	7 cut(s)	37, 638, 758, 833, 1069, 1322, 1340
AsuHPI	GGTGA	5 cut(s)	257, 835, 1325, 1495, 1517
AvaII	GGWCC	5 cut(s)	37, 758, 833, 1069, 1340
BamHI	GGATCC	1 cut(s)	1191
BauI	CACGAG	2 cut(s)	12, 1574
BbsI	GAAGAC	1 cut(s)	1105
BbvCI	CCTCAGC	2 cut(s)	381, 1239
BbvI	GCAGC	3 cut(s)	88, 719, 1437
BccI	CCATC	4 cut(s)	739, 749, 1456, 1530
BceAI	ACGGC	2 cut(s)	633, 1212
BcgI	CGANNNNNNTGC	4 cut(s)	168, 202, 1163, 1197
BciT130I	CCWGG	1 cut(s)	762
BcoDI	GTCTC	4 cut(s)	486, 802, 988, 1424
BfaI	CTAG	4 cut(s)	645, 696, 1031, 1545
BfmI	CTRYAG	2 cut(s)	102, 1423
BfrI	CTTAAG	2 cut(s)	1202, 1457
BfuAI	ACCTGC	2 cut(s)	95, 1328
BisI	GCNGC	4 cut(s)	102, 708, 1426, 1495
BlpI	GCTNAGC	1 cut(s)	390
BlsI	GCNGC	4 cut(s)	103, 709, 1427, 1496
Bme1390I	CCNGG	1 cut(s)	762
Bme18I	GGWCC	5 cut(s)	37, 758, 833, 1069, 1340
BmeRI	GACNNNNNGTC	1 cut(s)	289
BmgT120I	GGNCC	7 cut(s)	37, 638, 758, 833, 1069, 1322, 1340
BmiI	GGNNCC	5 cut(s)	39, 640, 834, 1193, 1342
BmrFI	CCNGG	1 cut(s)	762
BmrI	ACTGGG	2 cut(s)	377, 385
BmsI	GCATC	5 cut(s)	80, 664, 672, 1183, 1507
BmuI	ACTGGG	2 cut(s)	377, 385
BpiI	GAAGAC	1 cut(s)	1105
BplI	GAGNNNNNCTC	2 cut(s)	212, 244
BpmI	CTGGAG	2 cut(s)	365, 705
Bpu10I	CCTNAGC	2 cut(s)	381, 1239
Bpu1102I	GCTNAGC	1 cut(s)	390
BpuEI	CTTGAG	1 cut(s)	771
BsaBI	GATNNNNATC	3 cut(s)	179, 1251, 1521
BsaI	GGTCTC	1 cut(s)	802
BsaJI	CCNNGG	1 cut(s)	1131
BsaWI	WCCGGW	1 cut(s)	1078
Bsc4I	CCNNNNNNNGG	6 cut(s)	280, 563, 791, 1078, 1132, 1462
Bse1I	ACTGG	6 cut(s)	75, 320, 372, 380, 1359, 1371
Bse3DI	GCAATG	1 cut(s)	1504
Bse8I	GATNNNNATC	3 cut(s)	179, 1251, 1521
BseAI	TCCGGA	1 cut(s)	1078
BseBI	CCWGG	1 cut(s)	762
BseDI	CCNNGG	1 cut(s)	1131
BseGI	GGATG	3 cut(s)	71, 731, 955
BseJI	GATNNNNATC	3 cut(s)	179, 1251, 1521
BseLI	CCNNNNNNNGG	6 cut(s)	280, 563, 791, 1078, 1132, 1462
BseMI	GCAATG	1 cut(s)	1504
BseMII	CTCAG	6 cut(s)	59, 372, 381, 936, 1230, 1401
BseNI	ACTGG	6 cut(s)	75, 320, 372, 380, 1359, 1371
BseXI	GCAGC	3 cut(s)	88, 719, 1437
Bsh1236I	CGCG	1 cut(s)	1091
BshFI	GGCC	2 cut(s)	639, 1323
BsiSI	CCGG	2 cut(s)	473, 1079
BslFI	GGGAC	2 cut(s)	415, 1326
BslI	CCNNNNNNNGG	6 cut(s)	280, 563, 791, 1078, 1132, 1462
BsmAI	GTCTC	4 cut(s)	486, 802, 988, 1424
BsmBI	CGTCTC	1 cut(s)	1424
BsmFI	GGGAC	2 cut(s)	415, 1326
BsmI	GAATGC	2 cut(s)	73, 325
BsnI	GGCC	2 cut(s)	639, 1323
Bso31I	GGTCTC	1 cut(s)	802
Bsp13I	TCCGGA	1 cut(s)	1078
Bsp143I	GATC	8 cut(s)	50, 174, 568, 609, 880, 1191, 1388, 1511
Bsp1720I	GCTNAGC	1 cut(s)	390
Bsp68I	TCGCGA	1 cut(s)	1091
BspACI	CCGC	2 cut(s)	1445, 1494
BspANI	GGCC	2 cut(s)	639, 1323
BspCNI	CTCAG	6 cut(s)	58, 373, 382, 937, 1231, 1402
BspEI	TCCGGA	1 cut(s)	1078
BspFNI	CGCG	1 cut(s)	1091
BspLI	GGNNCC	5 cut(s)	39, 640, 834, 1193, 1342
BspMAI	CTGCAG	2 cut(s)	106, 1427
BspMI	ACCTGC	2 cut(s)	95, 1328
BspPI	GGATC	7 cut(s)	169, 576, 617, 875, 1186, 1199, 1396
BspQI	GCTCTTC	2 cut(s)	110, 1131
BspTI	CTTAAG	2 cut(s)	1202, 1457
BspTNI	GGTCTC	1 cut(s)	802
BsrDI	GCAATG	1 cut(s)	1504
BsrI	ACTGG	6 cut(s)	75, 320, 372, 380, 1359, 1371
BssECI	CCNNGG	1 cut(s)	1131
BssMI	GATC	8 cut(s)	50, 174, 568, 609, 880, 1191, 1388, 1511
BssSI	CACGAG	2 cut(s)	12, 1574
BssT1I	CCWWGG	1 cut(s)	1131
Bst2BI	CACGAG	2 cut(s)	12, 1574
Bst2UI	CCWGG	1 cut(s)	762
Bst4CI	ACNGT	5 cut(s)	657, 909, 1162, 1401, 1596
Bst6I	CTCTTC	2 cut(s)	110, 1131
BstAFI	CTTAAG	2 cut(s)	1202, 1457
BstAPI	GCANNNNNTGC	2 cut(s)	150, 195
BstC8I	GCNNGC	2 cut(s)	1143, 1294
BstDEI	CTNAG	7 cut(s)	45, 381, 390, 945, 968, 1239, 1410
BstEII	GGTNACC	1 cut(s)	1437
BstF5I	GGATG	3 cut(s)	71, 731, 955
BstFNI	CGCG	1 cut(s)	1091
BstKTI	GATC	8 cut(s)	53, 177, 571, 612, 883, 1194, 1391, 1514
BstMAI	GTCTC	4 cut(s)	486, 802, 988, 1424
BstMBI	GATC	8 cut(s)	50, 174, 568, 609, 880, 1191, 1388, 1511
BstMWI	GCNNNNNNNGC	7 cut(s)	150, 195, 386, 645, 713, 1217, 1298
BstNI	CCWGG	1 cut(s)	762
BstNSI	RCATGY	4 cut(s)	398, 481, 1145, 1573
BstPI	GGTNACC	1 cut(s)	1437
BstSCI	CCNGG	1 cut(s)	760
BstSFI	CTRYAG	2 cut(s)	102, 1423
BstUI	CGCG	1 cut(s)	1091
BstV1I	GCAGC	3 cut(s)	88, 719, 1437
BstV2I	GAAGAC	1 cut(s)	1105
BstX2I	RGATCY	2 cut(s)	174, 1191
BstXI	CCANNNNNNTGG	1 cut(s)	1366
BstYI	RGATCY	2 cut(s)	174, 1191
BsuRI	GGCC	2 cut(s)	639, 1323
BtsCI	GGATG	3 cut(s)	71, 731, 955
BtsI	GCAGTG	1 cut(s)	139
BtsIMutI	CAGTG	5 cut(s)	82, 139, 669, 942, 1366
BtuMI	TCGCGA	1 cut(s)	1091
BveI	ACCTGC	2 cut(s)	95, 1328
Cac8I	GCNNGC	2 cut(s)	1143, 1294
CaiI	CAGNNNCTG	1 cut(s)	683
Cfr13I	GGNCC	7 cut(s)	37, 638, 758, 833, 1069, 1322, 1340
Csp6I	GTAC	1 cut(s)	1230
CviAII	CATG	8 cut(s)	395, 478, 533, 739, 1117, 1142, 1474, 1570
CviQI	GTAC	1 cut(s)	1230
DdeI	CTNAG	7 cut(s)	45, 381, 390, 945, 968, 1239, 1410
DpnI	GATC	8 cut(s)	52, 176, 570, 611, 882, 1193, 1390, 1513
DpnII	GATC	8 cut(s)	50, 174, 568, 609, 880, 1191, 1388, 1511
DraI	TTTAAA	1 cut(s)	772
DraIII	CACNNNGTG	1 cut(s)	577
DriI	GACNNNNNGTC	1 cut(s)	289
Eam1104I	CTCTTC	2 cut(s)	110, 1131
Eam1105I	GACNNNNNGTC	1 cut(s)	289
EarI	CTCTTC	2 cut(s)	110, 1131
Eco130I	CCWWGG	1 cut(s)	1131
Eco31I	GGTCTC	1 cut(s)	802
Eco32I	GATATC	1 cut(s)	1253
Eco47I	GGWCC	5 cut(s)	37, 758, 833, 1069, 1340
Eco57I	CTGAAG	2 cut(s)	1425, 1474
Eco91I	GGTNACC	1 cut(s)	1437
EcoO109I	RGGNCCY	4 cut(s)	37, 833, 1069, 1340
EcoO65I	GGTNACC	1 cut(s)	1437
EcoRII	CCWGG	1 cut(s)	760
EcoRV	GATATC	1 cut(s)	1253
EcoT14I	CCWWGG	1 cut(s)	1131
EcoT22I	ATGCAT	1 cut(s)	73
ErhI	CCWWGG	1 cut(s)	1131
Esp3I	CGTCTC	1 cut(s)	1424
FaeI	CATG	8 cut(s)	398, 481, 536, 742, 1120, 1145, 1477, 1573
FaqI	GGGAC	2 cut(s)	415, 1326
FatI	CATG	8 cut(s)	394, 477, 532, 738, 1116, 1141, 1473, 1569
FauI	CCCGC	1 cut(s)	1452
FblI	GTMKAC	2 cut(s)	1099, 1563
Fnu4HI	GCNGC	4 cut(s)	102, 708, 1426, 1495
FokI	GGATG	3 cut(s)	58, 718, 962
Fsp4HI	GCNGC	4 cut(s)	102, 708, 1426, 1495
FspBI	CTAG	4 cut(s)	645, 696, 1031, 1545
GluI	GCNGC	4 cut(s)	102, 708, 1426, 1495
GsuI	CTGGAG	2 cut(s)	365, 705
HaeIII	GGCC	2 cut(s)	639, 1323
HapII	CCGG	2 cut(s)	473, 1079
Hin1II	CATG	8 cut(s)	398, 481, 536, 742, 1120, 1145, 1477, 1573
HincII	GTYRAC	1 cut(s)	1100
HindII	GTYRAC	1 cut(s)	1100
HinfI	GANTC	7 cut(s)	92, 180, 587, 623, 680, 899, 981
HpaII	CCGG	2 cut(s)	473, 1079
HphI	GGTGA	5 cut(s)	257, 835, 1325, 1495, 1517
Hpy166II	GTNNAC	5 cut(s)	653, 1100, 1364, 1453, 1564
Hpy188I	TCNGA	8 cut(s)	31, 48, 179, 904, 1185, 1393, 1405, 1516
Hpy188III	TCNNGA	9 cut(s)	344, 684, 884, 1079, 1090, 1256, 1534, 1576, 1599
Hpy8I	GTNNAC	5 cut(s)	653, 1100, 1364, 1453, 1564
Hpy99I	CGWCG	2 cut(s)	35, 1104
HpyAV	CCTTC	4 cut(s)	116, 574, 612, 846
HpyCH4III	ACNGT	5 cut(s)	657, 909, 1162, 1401, 1596
HpyCH4IV	ACGT	3 cut(s)	486, 1102, 1417
HpyF10VI	GCNNNNNNNGC	7 cut(s)	150, 195, 386, 645, 713, 1217, 1298
HpyF3I	CTNAG	7 cut(s)	45, 381, 390, 945, 968, 1239, 1410
HpySE526I	ACGT	3 cut(s)	486, 1102, 1417
Hsp92II	CATG	8 cut(s)	398, 481, 536, 742, 1120, 1145, 1477, 1573
Kpn2I	TCCGGA	1 cut(s)	1078
Kzo9I	GATC	8 cut(s)	50, 174, 568, 609, 880, 1191, 1388, 1511
LguI	GCTCTTC	2 cut(s)	110, 1131
LmnI	GCTCC	2 cut(s)	236, 508
Lsp1109I	GCAGC	3 cut(s)	88, 719, 1437
LweI	GCATC	5 cut(s)	80, 664, 672, 1183, 1507
MaeI	CTAG	4 cut(s)	645, 696, 1031, 1545
MaeII	ACGT	3 cut(s)	486, 1102, 1417
MaeIII	GTNAC	3 cut(s)	719, 1437, 1501
MalI	GATC	8 cut(s)	52, 176, 570, 611, 882, 1193, 1390, 1513
MboI	GATC	8 cut(s)	50, 174, 568, 609, 880, 1191, 1388, 1511
MfeI	CAATTG	1 cut(s)	1479
MflI	RGATCY	2 cut(s)	174, 1191
MluCI	AATT	8 cut(s)	85, 145, 190, 926, 1039, 1148, 1345, 1479
MmeI	TCCRAC	3 cut(s)	54, 472, 759
Mph1103I	ATGCAT	1 cut(s)	73
MroI	TCCGGA	1 cut(s)	1078
MroXI	GAANNNNTTC	1 cut(s)	1152
MseI	TTAA	6 cut(s)	750, 771, 930, 1203, 1349, 1458
MslI	CAYNNNNRTG	2 cut(s)	633, 1574
MspA1I	CMGCKG	2 cut(s)	1238, 1494
MspCI	CTTAAG	2 cut(s)	1202, 1457
MspI	CCGG	2 cut(s)	473, 1079
MspR9I	CCNGG	1 cut(s)	762
MunI	CAATTG	1 cut(s)	1479
Mva1269I	GAATGC	2 cut(s)	73, 325
MvaI	CCWGG	1 cut(s)	762
MvnI	CGCG	1 cut(s)	1091
MwoI	GCNNNNNNNGC	7 cut(s)	150, 195, 386, 645, 713, 1217, 1298
NdeII	GATC	8 cut(s)	50, 174, 568, 609, 880, 1191, 1388, 1511
NlaIII	CATG	8 cut(s)	398, 481, 536, 742, 1120, 1145, 1477, 1573
NlaIV	GGNNCC	5 cut(s)	39, 640, 834, 1193, 1342
NmuCI	GTSAC	2 cut(s)	719, 1501
NruI	TCGCGA	1 cut(s)	1091
NsiI	ATGCAT	1 cut(s)	73
NspI	RCATGY	4 cut(s)	398, 481, 1145, 1573
OliI	CACNNNNGTG	1 cut(s)	633
PaeI	GCATGC	1 cut(s)	1145
PciI	ACATGT	1 cut(s)	477
PciSI	GCTCTTC	2 cut(s)	110, 1131
PcsI	WCGNNNNNNNCGW	1 cut(s)	1572
PctI	GAATGC	2 cut(s)	73, 325
PdmI	GAANNNNTTC	1 cut(s)	1152
PfeI	GAWTC	7 cut(s)	92, 180, 587, 623, 680, 899, 981
PflFI	GACNNNGTC	1 cut(s)	1559
PflMI	CCANNNNNTGG	1 cut(s)	280
PkrI	GCNGC	4 cut(s)	103, 709, 1427, 1496
PpuMI	RGGWCCY	4 cut(s)	37, 833, 1069, 1340
PscI	ACATGT	1 cut(s)	477
PsiI	TTATAA	1 cut(s)	858
Psp5II	RGGWCCY	4 cut(s)	37, 833, 1069, 1340
Psp6I	CCWGG	1 cut(s)	760
PspEI	GGTNACC	1 cut(s)	1437
PspGI	CCWGG	1 cut(s)	760
PspN4I	GGNNCC	5 cut(s)	39, 640, 834, 1193, 1342
PspPI	GGNCC	7 cut(s)	37, 638, 758, 833, 1069, 1322, 1340
PspPPI	RGGWCCY	4 cut(s)	37, 833, 1069, 1340
PsrI	GAACNNNNNNTAC	2 cut(s)	443, 475
PstI	CTGCAG	2 cut(s)	106, 1427
PstNI	CAGNNNCTG	1 cut(s)	683
PsuI	RGATCY	2 cut(s)	174, 1191
PsyI	GACNNNGTC	1 cut(s)	1559
PvuII	CAGCTG	1 cut(s)	1238
RruI	TCGCGA	1 cut(s)	1091
RsaI	GTAC	1 cut(s)	1231
RsaNI	GTAC	1 cut(s)	1230
RseI	CAYNNNNRTG	2 cut(s)	633, 1574
SalI	GTCGAC	1 cut(s)	1098
SapI	GCTCTTC	2 cut(s)	110, 1131
SaqAI	TTAA	6 cut(s)	750, 771, 930, 1203, 1349, 1458
SatI	GCNGC	4 cut(s)	102, 708, 1426, 1495
Sau3AI	GATC	8 cut(s)	50, 174, 568, 609, 880, 1191, 1388, 1511
Sau96I	GGNCC	7 cut(s)	37, 638, 758, 833, 1069, 1322, 1340
ScrFI	CCNGG	1 cut(s)	762
SfaNI	GCATC	5 cut(s)	80, 664, 672, 1183, 1507
SfcI	CTRYAG	2 cut(s)	102, 1423
SinI	GGWCC	5 cut(s)	37, 758, 833, 1069, 1340
SmiMI	CAYNNNNRTG	2 cut(s)	633, 1574
SmlI	CTYRAG	3 cut(s)	786, 1202, 1457
SmoI	CTYRAG	3 cut(s)	786, 1202, 1457
SphI	GCATGC	1 cut(s)	1145
Sse9I	AATT	8 cut(s)	85, 145, 190, 926, 1039, 1148, 1345, 1479
SsiI	CCGC	2 cut(s)	1445, 1494
SspMI	CTAG	4 cut(s)	645, 696, 1031, 1545
StyD4I	CCNGG	1 cut(s)	760
StyI	CCWWGG	1 cut(s)	1131
TaaI	ACNGT	5 cut(s)	657, 909, 1162, 1401, 1596
TaiI	ACGT	3 cut(s)	489, 1105, 1420
TaqI	TCGA	3 cut(s)	1099, 1177, 1554
TasI	AATT	8 cut(s)	85, 145, 190, 926, 1039, 1148, 1345, 1479
TauI	GCSGC	1 cut(s)	1497
TfiI	GAWTC	7 cut(s)	92, 180, 587, 623, 680, 899, 981
Tru1I	TTAA	6 cut(s)	750, 771, 930, 1203, 1349, 1458
Tru9I	TTAA	6 cut(s)	750, 771, 930, 1203, 1349, 1458
TscAI	CASTG	5 cut(s)	82, 146, 676, 949, 1366
TseFI	GTSAC	2 cut(s)	719, 1501
TseI	GCWGC	3 cut(s)	101, 707, 1425
Tsp45I	GTSAC	2 cut(s)	719, 1501
TspDTI	ATGAA	4 cut(s)	14, 1015, 1105, 1299
TspRI	CASTG	5 cut(s)	82, 146, 676, 949, 1366
Tth111I	GACNNNGTC	1 cut(s)	1559
Van91I	CCANNNNNTGG	1 cut(s)	280
Vha464I	CTTAAG	2 cut(s)	1202, 1457
VpaK11BI	GGWCC	5 cut(s)	37, 758, 833, 1069, 1340
XapI	RAATTY	3 cut(s)	85, 926, 1039
XceI	RCATGY	4 cut(s)	398, 481, 1145, 1573
XmiI	GTMKAC	2 cut(s)	1099, 1563
XmnI	GAANNNNTTC	1 cut(s)	1152
XspI	CTAG	4 cut(s)	645, 696, 1031, 1545
Zsp2I	ATGCAT	1 cut(s)	73

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.