Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007021

Physical Location & Seq

Genomic Coordinates Forward (+)

877530 .. 880706

Gene Structure 3177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g01700.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGACAAAGGATGGGGTCTAACCCTTGAATCCGACTCCCTCGGCTTCTTCCTCAACAAACCTCCTCCTGGTGCTGCCGCCCCTCCTCCTCTGAACAAGAGAACCAATCTGTTTGGTGATAGGATGTTTTCCGGTATTGAATTCCCGGTTAAGACGAGACCGGCCGATGAGAACCGCACGGCCGAGGTCGACTTCTTCTCTGACAAGAAGAACAAGAGTGATGATGATCATGGGTTGAAATCCAACAACACGAGTGTCAGTGTCAAGAAGGAGAACTGGTCTGGTTTGGATGCTGTAAACACCGGCCTGCACCTTGTTACTGCAAACGCTGGAAGTGATCAATCGACGGTGGATGATGGGGTGTCATCTGATCCGGCGGATAGTAAAAGAGCAAAGAATCATGAGCTGGCACTGTTACAAGTTGAGCTCCAACGTATGAATGCTGAGAATCAGAGACTGAAGGAAATGCTTGGTCAAGTTACCAACAACTACACAGCTTTACAGACGCATCTTGTGGCAGTAATGCATCAACAGCAGCAAAACCAAGCCGCAGCTGATCAAACCTCACAGGATCGTGATCAGAATGAAGAAAAGTCTGAAGAGAAGAGACATGAGATTGGATCATCAGGAGCAACAGTACCAAGGCAGTTTCTGAATTTGGGTCCAAGGGAAGAAACAAAGACTGAGAATGAGGTTTCGAATTCTTCATCCGAAGCCAGAACTCGATCAGATTCACCTCAGAACAATGTTAGTGCTAATGGCAAAAGGGTTGGTAGGGAAGAGAGTCCTGAATCTGAAACACAAGGATGGGTGCCTAACAAGGTCGCCAAGCCCGATTCCCCACCTAAGCCTATTGATCAGGCCACTGAGGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGAGCCCGATCAGAAGCACCTATGATCACTGATGGCTGTCAATGGCGAAAGTACGGACAAAAGATGGCCAAAGGAAACCCATGTCCTCGTGCTTATTATCGATGTACCATGGCCGTAGGTTGTCCAGTTCGCAAACAGGTACAACGTTGCGCTGATGACAGAACCATATTGATCACAACTTACGAAGGCAACCACAACCACCCGCTGCCCCCAGCGGCGATGGCCATGGCGTCCACCACCACGGCAGCGGCTAGCATGTTACTTTCGGGGTCCATGTCAAGTGCCGACGGCATAATGAACCCGAACAATTTGCTAGCGCGTGCCATTCTTCCATGCTCATCAAGTGTAGCAACAATCTCAGCCTCAGCTCCATTCCCTACTGTCACATTAGACCTCACCACCAGTCCACCGTTACAGTTCCAAAGACCGCAACAAGGCCAGTTCCAGATGCCTTTCCCAGGACAGCCCCAGAACTTTGGATCATCTGGCTCAAGCCCTCAACTGCCCCAAGCATTCGGACAAGCCCTATACAACCAGTCTAAATTTTCCGGGCTTCAACTCTCCCAGGAACTATTAGCGCACCAAGCACAACAACAACAACAGCAAAGCCAAACATCCTCATTTGCTGACACAGTGAGTGCTGCCACTGCTGCCATCACCGCTGATCCGACCTTCACTGCCGCCCTAGCCGCTGCTATCACCTCCATTATCGGCGGATCGTCTCATCCCAACAACAACAACAACAATTCCACAACCTCAAACAACAGCAATGGCGCCAACAACAACAATAAAATCAACAGCTTCCCGGGAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010033 GO:0010036 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016036 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042221 GO:0042493 GO:0042594 GO:0044212 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071496 GO:0080029 GO:0080090 GO:0080169 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

572

Amino Acids

61.54

Weight (kDa)

7.15

Isoelectric Point (pI)

49.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	311 - 368	1.7e-25	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007021)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62300 AT4G04450 AT4G04450 AT4G22070 AT4G22070 AT4G22070 AT4G22070
fragaria_vesca	FvH4_3g01700 FvH4_3g01700
malus_domestica	MD05G1349800.v1.1 MD10G1324500.v1.1
prunus_persica	Prupe.4G017600_v2.0.a1 Prupe.4G017600_v2.0.a1
pyrus_communis	pycom05g31740 pycom10g27490
rosa_chinensis	RchiOBHm_Chr5g0002561
rosa_laevigata	RLG00000031039
rosa_multiflora	Rmu_sc0010731.1_g000002
rosa_roxburghii	Rroxscaffold_1G00073350
rosa_rugosa	Rorug04G0396900
rosa_samantha	Rh5AG020300 Rh5BG023000 Rh5CG022300 Rh5DG021400
rosa_wichuraiana	Rw5G001870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	811, 1673
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	2 cut(s)	891, 1219
AclI	AACGTT	1 cut(s)	1045
AclWI	GGATC	6 cut(s)	365, 579, 628, 1387, 1559, 1624
AcoI	YGGCCR	5 cut(s)	162, 180, 966, 1011, 1122
AcsI	RAATTY	4 cut(s)	140, 655, 700, 1442
AcuI	CTGAAG	2 cut(s)	479, 618
AcyI	GRCGYC	2 cut(s)	1130, 1674
AfaI	GTAC	4 cut(s)	639, 953, 1006, 1041
AfiI	CCNNNNNNNGG	3 cut(s)	68, 1334, 1358
AgsI	TTSAA	4 cut(s)	29, 140, 238, 1457
AjnI	CCWGG	3 cut(s)	67, 1357, 1464
AluBI	AGCT	7 cut(s)	406, 427, 497, 554, 887, 1268, 1701
AluI	AGCT	7 cut(s)	406, 427, 497, 554, 887, 1268, 1701
Alw21I	GWGCWC	1 cut(s)	429
Alw26I	GTCTC	5 cut(s)	151, 448, 601, 898, 1626
AlwI	GGATC	6 cut(s)	365, 579, 628, 1387, 1559, 1624
AlwNI	CAGNNNCTG	2 cut(s)	457, 652
Ama87I	CYCGRG	1 cut(s)	1705
AoxI	GGCC	9 cut(s)	162, 180, 304, 861, 870, 966, 1011, 1122, 1336
ApeKI	GCWGC	8 cut(s)	74, 535, 551, 1105, 1145, 1541, 1550, 1592
ApoI	RAATTY	4 cut(s)	140, 655, 700, 1442
AspLEI	GCGC	4 cut(s)	1052, 1219, 1480, 1676
AspS9I	GGNCC	2 cut(s)	662, 1170
AsuC2I	CCSGG	4 cut(s)	146, 1450, 1706, 1707
AsuHPI	GGTGA	5 cut(s)	128, 726, 1288, 1549, 1591
AsuII	TTCGAA	1 cut(s)	698
AsuNHI	GCTAGC	2 cut(s)	1151, 1213
AvaI	CYCGRG	1 cut(s)	1705
AvaII	GGWCC	2 cut(s)	662, 1170
BalI	TGGCCA	2 cut(s)	968, 1124
BanI	GGYRCC	2 cut(s)	811, 1673
BanII	GRGCYC	2 cut(s)	429, 907
BauI	CACGAG	2 cut(s)	250, 987
Bbv12I	GWGCWC	1 cut(s)	429
BbvCI	CCTCAGC	1 cut(s)	1264
BbvI	GCAGC	8 cut(s)	61, 547, 563, 1092, 1157, 1528, 1537, 1579
BccI	CCATC	7 cut(s)	6, 350, 801, 926, 958, 1114, 1562
BceAI	ACGGC	4 cut(s)	195, 998, 1158, 1204
BcgI	CGANNNNNNTGC	2 cut(s)	1192, 1226
BciT130I	CCWGG	3 cut(s)	69, 1359, 1466
BclI	TGATCA	7 cut(s)	226, 337, 556, 577, 856, 924, 1071
BcnI	CCSGG	4 cut(s)	146, 1450, 1706, 1707
BcoDI	GTCTC	5 cut(s)	151, 448, 601, 898, 1626
BfaI	CTAG	3 cut(s)	1152, 1214, 1586
BfoI	RGCGCY	1 cut(s)	1677
BglI	GCCNNNNNGGC	1 cut(s)	869
Bme1390I	CCNGG	7 cut(s)	69, 146, 1359, 1450, 1466, 1706, 1707
Bme18I	GGWCC	2 cut(s)	662, 1170
BmeT110I	CYCGRG	1 cut(s)	1705
BmgT120I	GGNCC	2 cut(s)	662, 1170
BmiI	GGNNCC	4 cut(s)	663, 813, 1171, 1675
BmrFI	CCNGG	7 cut(s)	69, 146, 1359, 1450, 1466, 1706, 1707
BmsI	GCATC	4 cut(s)	280, 517, 535, 1338
BmtI	GCTAGC	2 cut(s)	1155, 1217
BplI	GAGNNNNNCTC	2 cut(s)	871, 903
Bpu10I	CCTNAGC	2 cut(s)	846, 1264
Bpu14I	TTCGAA	1 cut(s)	698
BpuEI	CTTGAG	1 cut(s)	1375
BpuMI	CCSGG	4 cut(s)	146, 1450, 1706, 1707
Bsa29I	ATCGAT	1 cut(s)	1000
BsaBI	GATNNNNATC	2 cut(s)	225, 576
BsaHI	GRCGYC	2 cut(s)	1130, 1674
BsaI	GGTCTC	1 cut(s)	151
BsaWI	WCCGGW	1 cut(s)	131
BsaXI	ACNNNNNCTCC	4 cut(s)	263, 293, 621, 651
Bsc4I	CCNNNNNNNGG	3 cut(s)	68, 1334, 1358
Bse118I	RCCGGY	2 cut(s)	160, 302
Bse1I	ACTGG	5 cut(s)	281, 1025, 1302, 1339, 1435
Bse3DI	GCAATG	1 cut(s)	1675
Bse8I	GATNNNNATC	2 cut(s)	225, 576
BseBI	CCWGG	3 cut(s)	69, 1359, 1466
BseCI	ATCGAT	1 cut(s)	1000
BseGI	GGATG	8 cut(s)	17, 129, 295, 358, 707, 812, 1514, 1624
BseJI	GATNNNNATC	2 cut(s)	225, 576
BseLI	CCNNNNNNNGG	3 cut(s)	68, 1334, 1358
BseMI	GCAATG	1 cut(s)	1675
BseMII	CTCAG	7 cut(s)	435, 675, 752, 858, 909, 1272, 1278
BseNI	ACTGG	5 cut(s)	281, 1025, 1302, 1339, 1435
BseRI	GAGGAG	3 cut(s)	54, 75, 78
BseX3I	CGGCCG	2 cut(s)	162, 180
BseXI	GCAGC	8 cut(s)	61, 547, 563, 1092, 1157, 1528, 1537, 1579
BseYI	CCCAGC	1 cut(s)	1111
BsgI	GTGCAG	1 cut(s)	293
Bsh1236I	CGCG	2 cut(s)	891, 1219
Bsh1285I	CGRYCG	2 cut(s)	165, 183
BshFI	GGCC	9 cut(s)	164, 182, 306, 863, 872, 968, 1013, 1124, 1338
BshNI	GGYRCC	2 cut(s)	811, 1673
BshVI	ATCGAT	1 cut(s)	1000
BsiEI	CGRYCG	2 cut(s)	165, 183
BsiHKAI	GWGCWC	1 cut(s)	429
BsiHKCI	CYCGRG	1 cut(s)	1705
BsiSI	CCGG	7 cut(s)	132, 146, 161, 303, 374, 1449, 1706
BslI	CCNNNNNNNGG	3 cut(s)	68, 1334, 1358
BsmAI	GTCTC	5 cut(s)	151, 448, 601, 898, 1626
BsmBI	CGTCTC	2 cut(s)	898, 1626
BsmI	GAATGC	2 cut(s)	445, 1412
BsnI	GGCC	9 cut(s)	164, 182, 306, 863, 872, 968, 1013, 1124, 1338
Bso31I	GGTCTC	1 cut(s)	151
BsoBI	CYCGRG	1 cut(s)	1705
Bsp119I	TTCGAA	1 cut(s)	698
Bsp1286I	GDGCHC	2 cut(s)	429, 907
Bsp19I	CCATGG	2 cut(s)	1008, 1125
BspANI	GGCC	9 cut(s)	164, 182, 306, 863, 872, 968, 1013, 1124, 1338
BspCNI	CTCAG	7 cut(s)	436, 676, 751, 859, 908, 1271, 1277
BspDI	ATCGAT	1 cut(s)	1000
BspFNI	CGCG	2 cut(s)	891, 1219
BspHI	TCATGA	1 cut(s)	400
BspLI	GGNNCC	4 cut(s)	663, 813, 1171, 1675
BspOI	GCTAGC	2 cut(s)	1155, 1217
BspPI	GGATC	6 cut(s)	365, 579, 628, 1387, 1559, 1624
BspT104I	TTCGAA	1 cut(s)	698
BspT107I	GGYRCC	2 cut(s)	811, 1673
BspTNI	GGTCTC	1 cut(s)	151
BsrDI	GCAATG	1 cut(s)	1675
BsrFI	RCCGGY	2 cut(s)	160, 302
BsrI	ACTGG	5 cut(s)	281, 1025, 1302, 1339, 1435
BssAI	RCCGGY	2 cut(s)	160, 302
BssNI	GRCGYC	2 cut(s)	1130, 1674
BssSI	CACGAG	2 cut(s)	250, 987
BssT1I	CCWWGG	4 cut(s)	641, 665, 1008, 1125
Bst2BI	CACGAG	2 cut(s)	250, 987
Bst2UI	CCWGG	3 cut(s)	69, 1359, 1466
Bst4CI	ACNGT	7 cut(s)	349, 414, 637, 1282, 1311, 1317, 1534
Bst6I	CTCTTC	3 cut(s)	594, 599, 774
BstACI	GRCGYC	2 cut(s)	1130, 1674
BstBI	TTCGAA	1 cut(s)	698
BstC8I	GCNNGC	6 cut(s)	308, 408, 889, 1153, 1215, 1221
BstDEI	CTNAG	8 cut(s)	444, 684, 738, 846, 867, 895, 1258, 1264
BstDSI	CCRYGG	3 cut(s)	1008, 1125, 1140
BstENI	CCTNNNNNAGG	1 cut(s)	1356
BstF5I	GGATG	8 cut(s)	17, 129, 295, 358, 707, 812, 1514, 1624
BstFNI	CGCG	2 cut(s)	891, 1219
BstH2I	RGCGCY	1 cut(s)	1677
BstHHI	GCGC	4 cut(s)	1052, 1219, 1480, 1676
BstMAI	GTCTC	5 cut(s)	151, 448, 601, 898, 1626
BstMCI	CGRYCG	2 cut(s)	165, 183
BstMWI	GCNNNNNNNGC	9 cut(s)	532, 869, 1121, 1484, 1547, 1550, 1559, 1586, 1589
BstNI	CCWGG	3 cut(s)	69, 1359, 1466
BstNSI	RCATGY	1 cut(s)	1159
BstSCI	CCNGG	7 cut(s)	67, 144, 1357, 1448, 1464, 1704, 1705
BstUI	CGCG	2 cut(s)	891, 1219
BstV1I	GCAGC	8 cut(s)	61, 547, 563, 1092, 1157, 1528, 1537, 1579
BstXI	CCANNNNNNTGG	1 cut(s)	1376
BstZI	CGGCCG	2 cut(s)	162, 180
Bsu15I	ATCGAT	1 cut(s)	1000
BsuRI	GGCC	9 cut(s)	164, 182, 306, 863, 872, 968, 1013, 1124, 1338
BsuTUI	ATCGAT	1 cut(s)	1000
BtgI	CCRYGG	3 cut(s)	1008, 1125, 1140
BtgZI	GCGATG	1 cut(s)	1133
BtsCI	GGATG	8 cut(s)	17, 129, 295, 358, 707, 812, 1514, 1624
BtsI	GCAGTG	2 cut(s)	1545, 1575
BtsIMutI	CAGTG	7 cut(s)	265, 410, 864, 927, 1539, 1545, 1575
Cac8I	GCNNGC	6 cut(s)	308, 408, 889, 1153, 1215, 1221
CaiI	CAGNNNCTG	2 cut(s)	457, 652
CciI	TCATGA	1 cut(s)	400
CfoI	GCGC	4 cut(s)	1052, 1219, 1480, 1676
Cfr10I	RCCGGY	2 cut(s)	160, 302
Cfr13I	GGNCC	2 cut(s)	662, 1170
Cfr9I	CCCGGG	1 cut(s)	1705
ClaI	ATCGAT	1 cut(s)	1000
CseI	GACGC	3 cut(s)	514, 880, 1119
Csp6I	GTAC	4 cut(s)	638, 952, 1005, 1040
CviQI	GTAC	4 cut(s)	638, 952, 1005, 1040
DdeI	CTNAG	8 cut(s)	444, 684, 738, 846, 867, 895, 1258, 1264
DinI	GGCGCC	1 cut(s)	1675
EaeI	YGGCCR	5 cut(s)	162, 180, 966, 1011, 1122
EagI	CGGCCG	2 cut(s)	162, 180
Eam1104I	CTCTTC	3 cut(s)	594, 599, 774
EarI	CTCTTC	3 cut(s)	594, 599, 774
EciI	GGCGGA	2 cut(s)	392, 1629
Ecl136II	GAGCTC	1 cut(s)	427
EclXI	CGGCCG	2 cut(s)	162, 180
Eco130I	CCWWGG	4 cut(s)	641, 665, 1008, 1125
Eco24I	GRGCYC	2 cut(s)	429, 907
Eco31I	GGTCTC	1 cut(s)	151
Eco47I	GGWCC	2 cut(s)	662, 1170
Eco52I	CGGCCG	2 cut(s)	162, 180
Eco53kI	GAGCTC	1 cut(s)	427
Eco57I	CTGAAG	2 cut(s)	479, 618
Eco88I	CYCGRG	1 cut(s)	1705
EcoICRI	GAGCTC	1 cut(s)	427
EcoNI	CCTNNNNNAGG	1 cut(s)	1356
EcoRI	GAATTC	2 cut(s)	140, 700
EcoRII	CCWGG	3 cut(s)	67, 1357, 1464
EcoT14I	CCWWGG	4 cut(s)	641, 665, 1008, 1125
EcoT22I	ATGCAT	1 cut(s)	528
EcoT38I	GRGCYC	2 cut(s)	429, 907
EgeI	GGCGCC	1 cut(s)	1675
EheI	GGCGCC	1 cut(s)	1675
ErhI	CCWWGG	4 cut(s)	641, 665, 1008, 1125
Esp3I	CGTCTC	2 cut(s)	898, 1626
FauI	CCCGC	1 cut(s)	1110
FbaI	TGATCA	7 cut(s)	226, 337, 556, 577, 856, 924, 1071
FblI	GTMKAC	1 cut(s)	189
FokI	GGATG	8 cut(s)	24, 136, 302, 365, 694, 819, 1501, 1611
FriOI	GRGCYC	2 cut(s)	429, 907
FspBI	CTAG	3 cut(s)	1152, 1214, 1586
GlaI	GCGC	4 cut(s)	1051, 1218, 1479, 1675
GsaI	CCCAGC	1 cut(s)	1115
HaeII	RGCGCY	1 cut(s)	1677
HaeIII	GGCC	9 cut(s)	164, 182, 306, 863, 872, 968, 1013, 1124, 1338
HapII	CCGG	7 cut(s)	132, 146, 161, 303, 374, 1449, 1706
HgaI	GACGC	3 cut(s)	514, 880, 1119
HhaI	GCGC	4 cut(s)	1052, 1219, 1480, 1676
Hin1I	GRCGYC	2 cut(s)	1130, 1674
Hin6I	GCGC	4 cut(s)	1050, 1217, 1478, 1674
HinP1I	GCGC	4 cut(s)	1050, 1217, 1478, 1674
HincII	GTYRAC	1 cut(s)	190
HindII	GTYRAC	1 cut(s)	190
HinfI	GANTC	8 cut(s)	29, 35, 397, 448, 731, 784, 791, 836
HpaII	CCGG	7 cut(s)	132, 146, 161, 303, 374, 1449, 1706
HphI	GGTGA	5 cut(s)	128, 726, 1288, 1549, 1591
Hpy166II	GTNNAC	4 cut(s)	190, 298, 1134, 1307
Hpy188III	TCNNGA	6 cut(s)	265, 401, 575, 627, 788, 1345
Hpy8I	GTNNAC	4 cut(s)	190, 298, 1134, 1307
Hpy99I	CGWCG	2 cut(s)	349, 1190
HpyAV	CCTTC	4 cut(s)	262, 454, 1079, 1582
HpyCH4III	ACNGT	7 cut(s)	349, 414, 637, 1282, 1311, 1317, 1534
HpyCH4IV	ACGT	2 cut(s)	433, 1045
HpyCH4V	TGCA	3 cut(s)	310, 323, 526
HpyF10VI	GCNNNNNNNGC	9 cut(s)	532, 869, 1121, 1484, 1547, 1550, 1559, 1586, 1589
HpyF3I	CTNAG	8 cut(s)	444, 684, 738, 846, 867, 895, 1258, 1264
HpySE526I	ACGT	2 cut(s)	433, 1045
Hsp92I	GRCGYC	2 cut(s)	1130, 1674
HspAI	GCGC	4 cut(s)	1050, 1217, 1478, 1674
KasI	GGCGCC	1 cut(s)	1673
Ksp22I	TGATCA	7 cut(s)	226, 337, 556, 577, 856, 924, 1071
LmnI	GCTCC	3 cut(s)	432, 629, 1273
Lsp1109I	GCAGC	8 cut(s)	61, 547, 563, 1092, 1157, 1528, 1537, 1579
LweI	GCATC	4 cut(s)	280, 517, 535, 1338
MaeI	CTAG	3 cut(s)	1152, 1214, 1586
MaeII	ACGT	2 cut(s)	433, 1045
MaeIII	GTNAC	6 cut(s)	316, 414, 478, 1158, 1282, 1311
MhlI	GDGCHC	2 cut(s)	429, 907
MlsI	TGGCCA	2 cut(s)	968, 1124
MluCI	AATT	6 cut(s)	140, 655, 700, 1207, 1442, 1645
MluNI	TGGCCA	2 cut(s)	968, 1124
Mly113I	GGCGCC	1 cut(s)	1674
MlyI	GAGTC	2 cut(s)	29, 793
MmeI	TCCRAC	4 cut(s)	57, 267, 454, 1592
Mox20I	TGGCCA	2 cut(s)	968, 1124
Mph1103I	ATGCAT	1 cut(s)	528
MscI	TGGCCA	2 cut(s)	968, 1124
MseI	TTAA	1 cut(s)	150
MslI	CAYNNNNRTG	1 cut(s)	805
Msp20I	TGGCCA	2 cut(s)	968, 1124
MspA1I	CMGCKG	6 cut(s)	554, 1105, 1115, 1148, 1562, 1592
MspI	CCGG	7 cut(s)	132, 146, 161, 303, 374, 1449, 1706
MspR9I	CCNGG	7 cut(s)	69, 146, 1359, 1450, 1466, 1706, 1707
Mva1269I	GAATGC	2 cut(s)	445, 1412
MvaI	CCWGG	3 cut(s)	69, 1359, 1466
MvnI	CGCG	2 cut(s)	891, 1219
MwoI	GCNNNNNNNGC	9 cut(s)	532, 869, 1121, 1484, 1547, 1550, 1559, 1586, 1589
NarI	GGCGCC	1 cut(s)	1674
NciI	CCSGG	4 cut(s)	146, 1450, 1706, 1707
NcoI	CCATGG	2 cut(s)	1008, 1125
NheI	GCTAGC	2 cut(s)	1151, 1213
NlaIV	GGNNCC	4 cut(s)	663, 813, 1171, 1675
NmeAIII	GCCGAG	2 cut(s)	21, 208
NmuCI	GTSAC	1 cut(s)	1282
NsiI	ATGCAT	1 cut(s)	528
NspI	RCATGY	1 cut(s)	1159
NspV	TTCGAA	1 cut(s)	698
PagI	TCATGA	1 cut(s)	400
PcsI	WCGNNNNNNNCGW	1 cut(s)	831
PctI	GAATGC	2 cut(s)	445, 1412
PfeI	GAWTC	6 cut(s)	29, 397, 448, 731, 791, 836
PleI	GAGTC	2 cut(s)	29, 792
PluTI	GGCGCC	1 cut(s)	1677
PpsI	GAGTC	2 cut(s)	29, 792
Psp124BI	GAGCTC	1 cut(s)	429
Psp1406I	AACGTT	1 cut(s)	1045
Psp6I	CCWGG	3 cut(s)	67, 1357, 1464
PspFI	CCCAGC	1 cut(s)	1111
PspGI	CCWGG	3 cut(s)	67, 1357, 1464
PspN4I	GGNNCC	4 cut(s)	663, 813, 1171, 1675
PspPI	GGNCC	2 cut(s)	662, 1170
PstNI	CAGNNNCTG	2 cut(s)	457, 652
PvuII	CAGCTG	1 cut(s)	554
RsaI	GTAC	4 cut(s)	639, 953, 1006, 1041
RsaNI	GTAC	4 cut(s)	638, 952, 1005, 1040
RseI	CAYNNNNRTG	1 cut(s)	805
SacI	GAGCTC	1 cut(s)	429
SalI	GTCGAC	1 cut(s)	188
SaqAI	TTAA	1 cut(s)	150
Sau96I	GGNCC	2 cut(s)	662, 1170
SchI	GAGTC	2 cut(s)	29, 793
ScrFI	CCNGG	7 cut(s)	69, 146, 1359, 1450, 1466, 1706, 1707
SduI	GDGCHC	2 cut(s)	429, 907
SfaNI	GCATC	4 cut(s)	280, 517, 535, 1338
SfiI	GGCCNNNNNGGCC	1 cut(s)	869
SfoI	GGCGCC	1 cut(s)	1675
SfuI	TTCGAA	1 cut(s)	698
SinI	GGWCC	2 cut(s)	662, 1170
SmaI	CCCGGG	1 cut(s)	1707
SmiMI	CAYNNNNRTG	1 cut(s)	805
SmlI	CTYRAG	1 cut(s)	1390
SmoI	CTYRAG	1 cut(s)	1390
Sse9I	AATT	6 cut(s)	140, 655, 700, 1207, 1442, 1645
SspDI	GGCGCC	1 cut(s)	1673
SspMI	CTAG	3 cut(s)	1152, 1214, 1586
SstI	GAGCTC	1 cut(s)	429
StyD4I	CCNGG	7 cut(s)	67, 144, 1357, 1448, 1464, 1704, 1705
StyI	CCWWGG	4 cut(s)	641, 665, 1008, 1125
TaaI	ACNGT	7 cut(s)	349, 414, 637, 1282, 1311, 1317, 1534
TaiI	ACGT	2 cut(s)	436, 1048
TaqI	TCGA	6 cut(s)	189, 344, 698, 724, 901, 1000
TasI	AATT	6 cut(s)	140, 655, 700, 1207, 1442, 1645
TauI	GCSGC	6 cut(s)	80, 551, 1118, 1151, 1583, 1592
TfiI	GAWTC	6 cut(s)	29, 397, 448, 731, 791, 836
Tru1I	TTAA	1 cut(s)	150
Tru9I	TTAA	1 cut(s)	150
TscAI	CASTG	7 cut(s)	265, 417, 871, 934, 1539, 1552, 1582
TseFI	GTSAC	1 cut(s)	1282
TseI	GCWGC	8 cut(s)	74, 535, 551, 1105, 1145, 1541, 1550, 1592
Tsp45I	GTSAC	1 cut(s)	1282
TspDTI	ATGAA	4 cut(s)	452, 600, 696, 1211
TspGWI	ACGGA	1 cut(s)	969
TspMI	CCCGGG	1 cut(s)	1705
TspRI	CASTG	7 cut(s)	265, 417, 871, 934, 1539, 1552, 1582
VpaK11BI	GGWCC	2 cut(s)	662, 1170
XagI	CCTNNNNNAGG	1 cut(s)	1356
XapI	RAATTY	4 cut(s)	140, 655, 700, 1442
XceI	RCATGY	1 cut(s)	1159
XmaI	CCCGGG	1 cut(s)	1705
XmiI	GTMKAC	1 cut(s)	189
XspI	CTAG	3 cut(s)	1152, 1214, 1586
Zsp2I	ATGCAT	1 cut(s)	528

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.