Prupe.4G017600_v2.0.a1
WRKY Family

WRKY transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
822020 .. 825276
3257 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G017600.2

Sequence Viewer

Length: 1866 bp
ATGGACAAAGGATGGGGGCTCACCCTTGATTCTGAATCCTTCGGCTTCTTCCTCAACAAGCCCCCGGCTGCTGTTAAGCTTGATCATCATCAAAACAACAGCAAGAGAAGCAATTTTTTTGGTGGAGAAAGGATGTTTCCGGGTATTGAATTCCCCGTCAAACTTGGCGGCAGGGAAGACCAGCTGGCTGCTCCACAGCCATCCATTCATGACAACAATAATCGTGTGGTTGTGGATGAGGTCGACTTCTTTTCTGATCGTAAGAATAAGCACAATACAACCACCACTGATGATGATCATCAGGATATGAAATCCAACGGTACAATCAGCGTCAAGAAGGAGAATTGGACGGGCTTGGATGTAAATACTGGCTTGCACCTTGTTACTGCTAACACCGGAAGTGATCAGTCAATGGTTGATGATGGGATTTCATCCGATATGGATAACAAAAGGGCAAAGAATCATGAGCTGGCACAGTTGCAAGTGGAGCTCCAACGTATGAATTCTGAAAATCTGAGGCTGAAAGAAATGCTTGGTCAGGTGACCAACAACTACAGTGCTCTGCAGATGCATGTTGCGGCTGTAATGCAACAACAGCAGCAGCAGCAGCAAAATCACACAGCCGCGGCTGATCAAAGCTCTCAATTAAACCATGATCAGAATGTTGAAGCAAAGTCTGATCAAGAGAAGAAACAAGGGTTGGTGCCAAGGCAGTTTCTAAACTTGGGCCCCAGAGCCACAGCCGAGACCGATGACCAAGTTTCCAATTCTTCATCAGAAGCCAGAACCCGATCGGCTTCACCTCAGAACATTAATGAAGCTGCATCATCAAAAGATCATCACCTGAAGAAAAATGATCATCCTATTGGTCCATTGGATCCCGAAAACTCTAACAATTTCAGGGATGGTAAAAGGGTTGGAAGGGAAGAGAGTCCTGAATCTGAATCACAAGGCTGGGTGCCCAACAAGGCTCCCAAGCTCAACTCTGCAACTAATAAGCCAATTGATCAATCCACCGAGGCCACCATGAGGAAAGCCCGCGTATCGGTTCGCGCCAGATCAGAAGCTCCCATGATTACTGATGGATGTCAATGGCGAAAATACGGACAAAAGATGGCAAAAGGAAACCCATGTCCTCGTGCATATTATAGGTGTACCATGGCTGTTGGTTGTCCTGTTCGCAAACAAGTACAACGTTGTGCTGAGGACAGAACCATATTGATCACAACATATGAAGGCAACCATAACCACCCTCTGCCTCCAGCTGCAATGGCCATGGCATCAACCACAACAGCAGCAGCAAGCATGTTGCTTTCGGGCTCCATGTCAAGCGCAGATGGGATAATGAACCCAAACAATTTGCTAGCCAGAGCAATTCTTCCATGCTCATCAAGTGTGGCAACAATCTCAGCCTCAGCTCCTTTCCCTACTGTCACATTGGACCTCACCACCACCCCATTACAGTTCCAAAGACCACAGTCCCAATTTCAAGTTCCTTTCCCAGGGCAACAGCCACAACTGCCTCAAGTTTTTGGACAGGCCCTTTATAACCAATCCAAGTTTTCTGGGCTTCAGCTGTCCCAGGATTTAATGGGGTCTAATTCCCAACAGCAGCAACAACATTTGCCGCATCAAACTCAGTCTGCCTCGTTCGCTGACACGGTGAGTGCCGCTACAGCTGCCATAACTGCCGACCCAACTTTCACTGCTGCTCTTGCCGCCGCCATCACCTCCATCATCGGTGGAGGTCATCCGAACAACAACAACAACAACAACAACAACAGCGCCTCGACGACCTCCAACAACAGCAATGGAGGCAACAACAACAACAGCAACAGCAAAATGAGCGGCTTCCCAGGACATTAA

Protein Analysis

622

Amino Acids

67.6

Weight (kDa)

6.84

Isoelectric Point (pI)

47.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1548
AccB1I GGYRCC 2 cut(s) 703, 958
AccBSI CCGCTC 1 cut(s) 1848
AccI GTMKAC 1 cut(s) 243
AccII CGCG 3 cut(s) 626, 1041, 1053
AclI AACGTT 1 cut(s) 1195
AclWI GGATC 2 cut(s) 872, 885
AcoI YGGCCR 1 cut(s) 1272
AcsI RAATTY 2 cut(s) 149, 502
AcuI CTGAAG 2 cut(s) 866, 1556
AfaI GTAC 3 cut(s) 322, 1156, 1191
AfiI CCNNNNNNNGG 3 cut(s) 1029, 1045, 1502
AgsI TTSAA 3 cut(s) 149, 668, 1490
AjnI CCWGG 3 cut(s) 1501, 1581, 1855
AjuI GAANNNNNNNTTGG 4 cut(s) 683, 715, 1476, 1508
Alw21I GWGCWC 2 cut(s) 492, 562
Alw26I GTCTC 1 cut(s) 740
AlwI GGATC 2 cut(s) 872, 885
AoxI GGCC 4 cut(s) 727, 1020, 1272, 1539
ApaI GGGCCC 1 cut(s) 731
ApoI RAATTY 2 cut(s) 149, 502
AseI ATTAAT 1 cut(s) 813
AspLEI GCGC 3 cut(s) 1055, 1334, 1787
AspS9I GGNCC 5 cut(s) 727, 728, 869, 1441, 1540
AsuC2I CCSGG 2 cut(s) 65, 141
AsuHPI GGTGA 7 cut(s) 13, 553, 792, 833, 1438, 1675, 1720
AsuNHI GCTAGC 1 cut(s) 1363
AvaII GGWCC 2 cut(s) 869, 1441
BaeGI GKGCMC 2 cut(s) 731, 963
BalI TGGCCA 1 cut(s) 1274
BamHI GGATCC 1 cut(s) 877
BanI GGYRCC 2 cut(s) 703, 958
BanII GRGCYC 4 cut(s) 21, 492, 731, 1322
BauI CACGAG 1 cut(s) 1137
BbsI GAAGAC 1 cut(s) 183
Bbv12I GWGCWC 2 cut(s) 492, 562
BbvCI CCTCAGC 2 cut(s) 1203, 1414
BccI CCATC 9 cut(s) 6, 208, 416, 899, 1076, 1108, 1331, 1733, 1742
BciT130I CCWGG 3 cut(s) 1503, 1583, 1857
BclI TGATCA 9 cut(s) 82, 295, 403, 631, 655, 679, 856, 1006, 1221
BcnI CCSGG 2 cut(s) 65, 141
BcoDI GTCTC 1 cut(s) 740
BfaI CTAG 1 cut(s) 1364
BfmI CTRYAG 3 cut(s) 553, 563, 1674
BfoI RGCGCY 1 cut(s) 1788
Bme1390I CCNGG 5 cut(s) 65, 141, 1503, 1583, 1857
Bme18I GGWCC 2 cut(s) 869, 1441
BmgT120I GGNCC 5 cut(s) 727, 728, 869, 1441, 1540
BmiI GGNNCC 7 cut(s) 705, 729, 730, 879, 960, 972, 1321
BmrFI CCNGG 5 cut(s) 65, 141, 1503, 1583, 1857
BmsI GCATC 4 cut(s) 558, 833, 1289, 1639
BmtI GCTAGC 1 cut(s) 1367
BoxI GACNNNNGTC 1 cut(s) 1477
BpiI GAAGAC 1 cut(s) 183
BpmI CTGGAG 1 cut(s) 1245
Bpu10I CCTNAGC 2 cut(s) 1203, 1414
BpuEI CTTGAG 1 cut(s) 1509
BpuMI CCSGG 2 cut(s) 65, 141
BsaBI GATNNNNATC 3 cut(s) 87, 294, 297
BsaI GGTCTC 1 cut(s) 740
BsaWI WCCGGW 1 cut(s) 395
Bsc4I CCNNNNNNNGG 3 cut(s) 1029, 1045, 1502
Bse1I ACTGG 1 cut(s) 373
Bse3DI GCAATG 2 cut(s) 1275, 1816
Bse8I GATNNNNATC 3 cut(s) 87, 294, 297
BseBI CCWGG 3 cut(s) 1503, 1583, 1857
BseJI GATNNNNATC 3 cut(s) 87, 294, 297
BseLI CCNNNNNNNGG 3 cut(s) 1029, 1045, 1502
BseMI GCAATG 2 cut(s) 1275, 1816
BseMII CTCAG 6 cut(s) 506, 818, 1194, 1422, 1428, 1652
BseNI ACTGG 1 cut(s) 373
BseSI GKGCMC 2 cut(s) 731, 963
BseYI CCCAGC 1 cut(s) 954
Bsh1236I CGCG 3 cut(s) 626, 1041, 1053
Bsh1285I CGRYCG 1 cut(s) 794
BshFI GGCC 4 cut(s) 729, 1022, 1274, 1541
BshNI GGYRCC 2 cut(s) 703, 958
BsiEI CGRYCG 1 cut(s) 794
BsiHKAI GWGCWC 2 cut(s) 492, 562
BsiSI CCGG 3 cut(s) 65, 140, 396
BslFI GGGAC 2 cut(s) 1465, 1564
BslI CCNNNNNNNGG 3 cut(s) 1029, 1045, 1502
BsmAI GTCTC 1 cut(s) 740
BsmFI GGGAC 2 cut(s) 1465, 1564
BsnI GGCC 4 cut(s) 729, 1022, 1274, 1541
Bso31I GGTCTC 1 cut(s) 740
Bsp120I GGGCCC 1 cut(s) 727
Bsp1286I GDGCHC 6 cut(s) 21, 492, 562, 731, 963, 1322
Bsp19I CCATGG 2 cut(s) 1158, 1275
BspANI GGCC 4 cut(s) 729, 1022, 1274, 1541
BspCNI CTCAG 6 cut(s) 507, 817, 1195, 1421, 1427, 1651
BspFNI CGCG 3 cut(s) 626, 1041, 1053
BspHI TCATGA 2 cut(s) 208, 463
BspLI GGNNCC 7 cut(s) 705, 729, 730, 879, 960, 972, 1321
BspMAI CTGCAG 1 cut(s) 567
BspOI GCTAGC 1 cut(s) 1367
BspPI GGATC 2 cut(s) 872, 885
BspT107I GGYRCC 2 cut(s) 703, 958
BspTNI GGTCTC 1 cut(s) 740
BsrBI CCGCTC 1 cut(s) 1848
BsrDI GCAATG 2 cut(s) 1275, 1816
BsrI ACTGG 1 cut(s) 373
BssSI CACGAG 1 cut(s) 1137
BssT1I CCWWGG 3 cut(s) 707, 1158, 1275
Bst2BI CACGAG 1 cut(s) 1137
Bst2UI CCWGG 3 cut(s) 1503, 1583, 1857
Bst4CI ACNGT 7 cut(s) 320, 477, 557, 1432, 1464, 1479, 1663
Bst6I CTCTTC 1 cut(s) 921
BstC8I GCNNGC 6 cut(s) 186, 374, 471, 1039, 1303, 1365
BstDEI CTNAG 6 cut(s) 515, 804, 1203, 1408, 1414, 1638
BstDSI CCRYGG 3 cut(s) 624, 1158, 1275
BstEII GGTNACC 1 cut(s) 541
BstENI CCTNNNNNAGG 1 cut(s) 1500
BstFNI CGCG 3 cut(s) 626, 1041, 1053
BstH2I RGCGCY 1 cut(s) 1788
BstHHI GCGC 3 cut(s) 1055, 1334, 1787
BstMAI GTCTC 1 cut(s) 740
BstMCI CGRYCG 1 cut(s) 794
BstNI CCWGG 3 cut(s) 1503, 1583, 1857
BstNSI RCATGY 2 cut(s) 575, 1309
BstPAI GACNNNNGTC 1 cut(s) 1477
BstPI GGTNACC 1 cut(s) 541
BstSCI CCNGG 5 cut(s) 63, 139, 1501, 1581, 1855
BstSFI CTRYAG 3 cut(s) 553, 563, 1674
BstSLI GKGCMC 2 cut(s) 731, 963
BstUI CGCG 3 cut(s) 626, 1041, 1053
BstV2I GAAGAC 1 cut(s) 183
BstX2I RGATCY 1 cut(s) 877
BstYI RGATCY 1 cut(s) 877
BsuRI GGCC 4 cut(s) 729, 1022, 1274, 1541
BtgI CCRYGG 3 cut(s) 624, 1158, 1275
BtsI GCAGTG 1 cut(s) 1704
BtsIMutI CAGTG 3 cut(s) 285, 562, 1704
Cac8I GCNNGC 6 cut(s) 186, 374, 471, 1039, 1303, 1365
CciI TCATGA 2 cut(s) 208, 463
CfoI GCGC 3 cut(s) 1055, 1334, 1787
Cfr13I GGNCC 5 cut(s) 727, 728, 869, 1441, 1540
Cfr42I CCGCGG 1 cut(s) 627
CseI GACGC 1 cut(s) 319
Csp6I GTAC 3 cut(s) 321, 1155, 1190
CviQI GTAC 3 cut(s) 321, 1155, 1190
DdeI CTNAG 6 cut(s) 515, 804, 1203, 1408, 1414, 1638
EaeI YGGCCR 1 cut(s) 1272
Eam1104I CTCTTC 1 cut(s) 921
EarI CTCTTC 1 cut(s) 921
Ecl136II GAGCTC 1 cut(s) 490
Eco130I CCWWGG 3 cut(s) 707, 1158, 1275
Eco24I GRGCYC 4 cut(s) 21, 492, 731, 1322
Eco31I GGTCTC 1 cut(s) 740
Eco47I GGWCC 2 cut(s) 869, 1441
Eco53kI GAGCTC 1 cut(s) 490
Eco57I CTGAAG 2 cut(s) 866, 1556
Eco91I GGTNACC 1 cut(s) 541
EcoICRI GAGCTC 1 cut(s) 490
EcoNI CCTNNNNNAGG 1 cut(s) 1500
EcoO109I RGGNCCY 2 cut(s) 728, 1540
EcoO65I GGTNACC 1 cut(s) 541
EcoRI GAATTC 2 cut(s) 149, 502
EcoRII CCWGG 3 cut(s) 1501, 1581, 1855
EcoT14I CCWWGG 3 cut(s) 707, 1158, 1275
EcoT22I ATGCAT 1 cut(s) 573
EcoT38I GRGCYC 4 cut(s) 21, 492, 731, 1322
ErhI CCWWGG 3 cut(s) 707, 1158, 1275
FalI AAGNNNNNCTT 2 cut(s) 516, 548
FaqI GGGAC 2 cut(s) 1465, 1564
FauI CCCGC 1 cut(s) 1046
FauNDI CATATG 1 cut(s) 1231
FbaI TGATCA 9 cut(s) 82, 295, 403, 631, 655, 679, 856, 1006, 1221
FblI GTMKAC 1 cut(s) 243
FriOI GRGCYC 4 cut(s) 21, 492, 731, 1322
FspBI CTAG 1 cut(s) 1364
GlaI GCGC 3 cut(s) 1054, 1333, 1786
GsaI CCCAGC 1 cut(s) 958
GsuI CTGGAG 1 cut(s) 1245
HaeII RGCGCY 1 cut(s) 1788
HaeIII GGCC 4 cut(s) 729, 1022, 1274, 1541
HapII CCGG 3 cut(s) 65, 140, 396
HgaI GACGC 1 cut(s) 319
HhaI GCGC 3 cut(s) 1055, 1334, 1787
Hin6I GCGC 3 cut(s) 1053, 1332, 1785
HinP1I GCGC 3 cut(s) 1053, 1332, 1785
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HindIII AAGCTT 1 cut(s) 77
HinfI GANTC 6 cut(s) 29, 35, 460, 931, 938, 944
HpaII CCGG 3 cut(s) 65, 140, 396
HphI GGTGA 7 cut(s) 13, 553, 792, 833, 1438, 1675, 1720
Hpy166II GTNNAC 2 cut(s) 244, 1155
Hpy188III TCNNGA 7 cut(s) 209, 302, 334, 464, 683, 881, 935
Hpy8I GTNNAC 2 cut(s) 244, 1155
Hpy99I CGWCG 1 cut(s) 1795
HpyAV CCTTC 4 cut(s) 49, 331, 915, 1229
HpyCH4III ACNGT 7 cut(s) 320, 477, 557, 1432, 1464, 1479, 1663
HpyCH4IV ACGT 2 cut(s) 496, 1195
HpyCH4V TGCA 9 cut(s) 376, 481, 565, 571, 589, 824, 989, 1142, 1268
HpyF3I CTNAG 6 cut(s) 515, 804, 1203, 1408, 1414, 1638
HpySE526I ACGT 2 cut(s) 496, 1195
HspAI GCGC 3 cut(s) 1053, 1332, 1785
Ksp22I TGATCA 9 cut(s) 82, 295, 403, 631, 655, 679, 856, 1006, 1221
KspI CCGCGG 1 cut(s) 627
LmnI GCTCC 7 cut(s) 196, 487, 495, 976, 1072, 1325, 1423
LweI GCATC 4 cut(s) 558, 833, 1289, 1639
MaeI CTAG 1 cut(s) 1364
MaeII ACGT 2 cut(s) 496, 1195
MaeIII GTNAC 3 cut(s) 382, 541, 1432
MbiI CCGCTC 1 cut(s) 1848
MboII GAAGA 7 cut(s) 40, 188, 700, 762, 859, 938, 1370
MfeI CAATTG 1 cut(s) 1002
MflI RGATCY 1 cut(s) 877
MhlI GDGCHC 6 cut(s) 21, 492, 562, 731, 963, 1322
MlsI TGGCCA 1 cut(s) 1274
MluNI TGGCCA 1 cut(s) 1274
MlyI GAGTC 1 cut(s) 940
MmeI TCCRAC 4 cut(s) 339, 517, 898, 1824
Mox20I TGGCCA 1 cut(s) 1274
Mph1103I ATGCAT 1 cut(s) 573
MscI TGGCCA 1 cut(s) 1274
MseI TTAA 5 cut(s) 75, 647, 813, 1589, 1864
Msp20I TGGCCA 1 cut(s) 1274
MspA1I CMGCKG 5 cut(s) 184, 626, 1265, 1576, 1679
MspI CCGG 3 cut(s) 65, 140, 396
MspR9I CCNGG 5 cut(s) 65, 141, 1503, 1583, 1857
MunI CAATTG 1 cut(s) 1002
MvaI CCWGG 3 cut(s) 1503, 1583, 1857
MvnI CGCG 3 cut(s) 626, 1041, 1053
NciI CCSGG 2 cut(s) 65, 141
NcoI CCATGG 2 cut(s) 1158, 1275
NdeI CATATG 1 cut(s) 1231
NheI GCTAGC 1 cut(s) 1363
NlaIV GGNNCC 7 cut(s) 705, 729, 730, 879, 960, 972, 1321
NmeAIII GCCGAG 1 cut(s) 769
NmuCI GTSAC 2 cut(s) 541, 1432
NsiI ATGCAT 1 cut(s) 573
NspI RCATGY 2 cut(s) 575, 1309
PagI TCATGA 2 cut(s) 208, 463
PasI CCCWGGG 1 cut(s) 1502
PfeI GAWTC 5 cut(s) 29, 35, 460, 938, 944
Ple19I CGATCG 1 cut(s) 794
PleI GAGTC 1 cut(s) 939
PpsI GAGTC 1 cut(s) 939
PshAI GACNNNNGTC 1 cut(s) 1477
PshBI ATTAAT 1 cut(s) 813
PsiI TTATAA 1 cut(s) 1548
Psp124BI GAGCTC 1 cut(s) 492
Psp1406I AACGTT 1 cut(s) 1195
Psp6I CCWGG 3 cut(s) 1501, 1581, 1855
PspEI GGTNACC 1 cut(s) 541
PspFI CCCAGC 1 cut(s) 954
PspGI CCWGG 3 cut(s) 1501, 1581, 1855
PspN4I GGNNCC 7 cut(s) 705, 729, 730, 879, 960, 972, 1321
PspOMI GGGCCC 1 cut(s) 727
PspPI GGNCC 5 cut(s) 727, 728, 869, 1441, 1540
PstI CTGCAG 1 cut(s) 567
PsuI RGATCY 1 cut(s) 877
PvuI CGATCG 1 cut(s) 794
PvuII CAGCTG 4 cut(s) 184, 1265, 1576, 1679
RsaI GTAC 3 cut(s) 322, 1156, 1191
RsaNI GTAC 3 cut(s) 321, 1155, 1190
SacI GAGCTC 1 cut(s) 492
SacII CCGCGG 1 cut(s) 627
SalI GTCGAC 1 cut(s) 242
SaqAI TTAA 5 cut(s) 75, 647, 813, 1589, 1864
Sau96I GGNCC 5 cut(s) 727, 728, 869, 1441, 1540
SchI GAGTC 1 cut(s) 940
ScrFI CCNGG 5 cut(s) 65, 141, 1503, 1583, 1857
SduI GDGCHC 6 cut(s) 21, 492, 562, 731, 963, 1322
SfaNI GCATC 4 cut(s) 558, 833, 1289, 1639
SfcI CTRYAG 3 cut(s) 553, 563, 1674
Sfr303I CCGCGG 1 cut(s) 627
SgrBI CCGCGG 1 cut(s) 627
SinI GGWCC 2 cut(s) 869, 1441
SmlI CTYRAG 1 cut(s) 1524
SmoI CTYRAG 1 cut(s) 1524
SspMI CTAG 1 cut(s) 1364
SstI GAGCTC 1 cut(s) 492
StyD4I CCNGG 5 cut(s) 63, 139, 1501, 1581, 1855
StyI CCWWGG 3 cut(s) 707, 1158, 1275
TaaI ACNGT 7 cut(s) 320, 477, 557, 1432, 1464, 1479, 1663
TaiI ACGT 2 cut(s) 499, 1198
TaqI TCGA 2 cut(s) 243, 1790
TaqII GACCGA 1 cut(s) 764
TatI WGTACW 1 cut(s) 1189
TauI GCSGC 9 cut(s) 171, 581, 626, 629, 1630, 1673, 1721, 1724, 1851
TfiI GAWTC 5 cut(s) 29, 35, 460, 938, 944
Tru1I TTAA 5 cut(s) 75, 647, 813, 1589, 1864
Tru9I TTAA 5 cut(s) 75, 647, 813, 1589, 1864
TscAI CASTG 3 cut(s) 292, 562, 1711
TseFI GTSAC 2 cut(s) 541, 1432
Tsp45I GTSAC 2 cut(s) 541, 1432
TspDTI ATGAA 8 cut(s) 197, 323, 420, 515, 762, 831, 1248, 1361
TspGWI ACGGA 1 cut(s) 1119
TspRI CASTG 3 cut(s) 292, 562, 1711
VpaK11BI GGWCC 2 cut(s) 869, 1441
VspI ATTAAT 1 cut(s) 813
XagI CCTNNNNNAGG 1 cut(s) 1500
XapI RAATTY 2 cut(s) 149, 502
XceI RCATGY 2 cut(s) 575, 1309
XmiI GTMKAC 1 cut(s) 243
XspI CTAG 1 cut(s) 1364
Zsp2I ATGCAT 1 cut(s) 573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.