FvH4_3g05480

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
3200578 .. 3207881
7304 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g05480.t3

Sequence Viewer

Length: 2394 bp
ATGTCTCTCCCCACCAAACGCTCCTCATCAACCACCACCACCTCCTCCTCTTCTTCTTCCTCTTCTCCTCTCACATCTCCTCCGATGAAAAAGGCCAAGTCTCAGTCCCAGCCCGACTCCAAAAACGGCCTCTTCCACCACCATCACAACTCCTCCGACAACGACGACGACGGCCGCCGCGCCCAGCCCGACAATTTGTCCCGCAAAAAGGCCCAGCCCCCTCAGCCCGGCAAGAAGCAGTTCGTCATCAAACCCTTCAAAGCCAAACCGGCTGTACCCAAAAATCTTGAAGAGGAAACATGGGAAATACTGAAGTCTGCCATTTGTGCTATATTCGAAAAGAAACCCGTTTCATGCGTCTTGGAGGAACTTTATCAGGCTGTTTATAATCTTTGTGTGCACAAGATGGGAGGGAGTCTGTATCAGCGAATCGAAAAAGAGTGCGAAAGACACATAGCAGCGGCACTGCAGTCATTGGTTGGCCAAAGCCCAGATTTGGTGGTGTTCTTATCACTTGTCGAGAGATGTTGGCAGGATCTCTGTGCTCAAATATTGATGATACGCGATATAGCCCTGTATCTTGATAGAACTTATGTGAAACAAACACCAAATGTGCGTTCATTGTGGGACATGGGTTTGCAACTCTTCCGGAAACATCTTTCCCTCTCACCAGAAGTTGAGCACAAAATTGTCACTGGCCTTTTAAGAATGATTGAGAAAGAAAGATTAGGTGAAGCTGTGGCTAGGACTCTCATTAACCATCTAACGAAGATGTTTATAGCTTTAGGAATGTATTGGGAGAGCTTTGAGAAGCCATTTCTTGAGTGTAGTTCTGAATTTTATGGTACCGAAGGAGTGAAATACATGCAGCAATCAGATGTTCCCGAGTACTTGAAACATGTTGAGAAACGGTTGCATGAAGAACATGAAAGATGTTTACTCTACTTGGATGCAAGCACAAGAAAGCCATTGGTTGCAACTGCAGAAAAGCAGCTTCTAGAGCTCCATATACCTGGCATACTCGACAAGGGGTTCACGATGCTGATGGATGGGAATCGCATTGAGGACCTTCAGAGGATGTACACTCTTTTCTTAAGAGTAAATGCTCTTGAAGCACTCAAGCAAGCCCTTAGCTCATACATTAGGAAGACAGGGCAGAAAATGATCATGGATGAAGAAAAAGATAAAGACATGGTTTCTTCGCTTTTGGAGTTTAAGGCTTCTCTTGACACTATATGGGAAGAAAGTTTTTCCAAGAATGAAGCATTTTGCATCACTATAAAGGACGCATTTGAGCATCTTATAAATCTCCGCCAGAATCGACCTGCTGAGCTTATTGCAAAGTTTCTGGACGAGAAGCTTCGAGCTGGGAACAAGGGTACTTCCGAAGAGGAACTTGAGGGCACACTTGATAAAGTTTTGGTTTTATTTAGGTTTATACAGGGTAAGGATGTGTTTGAAGCATTTTACAAGAAGGATCTTGCAAAAAGACTACTTTTGGGAAAAAGTGCTTCTATTGATGCTGAGAAGTCGATGATTTCCAAGCTGAAGACCGAGTGTGGCAGTCAGTTTACAAACAAACTCGAAGGAATGTTTAAGGATATTGAATTGTCGAAAGAGATAAATGAGTCCTTCAGACAGTCGTCCCAGGCCAGGACAAAACTCCCATCAGGGATTGAGCTGAGTGTTCATGTCCTTACCTCGGGGTACTGGCCAACATACACTCCCATGGATGTGAGACTTCCTCATGAGTTGAATGTTTATCAGGATATTTTCAAAGAGTTTTACTTGAGCAAGTACAGCGGTAGGCGTTTAATGTGGCAAAATTCATTAGGTCACTGTGTGTTAAAAGCAGAGTTTCCTAAAGGCAGAAAGGAGCTTGCAGTTTCTCTGTTTCAGACTGTTGTTTTGATGCTTTTTAATGATGCCGAGAAGCTAAGCTTTCAAGACATTAAGGATTCCACTAGCATTGAAGACAAGGAACTTCGAAGAACTCTGCAGTCACTTGCATGTGGAAAAGTTCGCGTCCTGCAAAAGTTACCCAAAGGAAGAGACGTGGAGGATAACGATTCATTCACATTCAATGATACATTTACAGCTCCTCTCTACCGTATTAAGGTAAATGCAATCCAAATGAAGGAAACAGTGGAGGAGAACACAAGCACAACTGAAAGAGTATTCCAAGACCGCCAATATCAGATTGATGCTGCTATTGTTCGGATAATGAAAACTAGGAAGCTGCTGAGTCACACAATTCTGATAACTGAACTTTTCCAGCAGCTTAAGTTCCCCATAAAGCCGGCAGATTTGAAGAAAAGGATTGAGAGCCTGATTGACAGGGAGTACCTAGAACGGGACAAGAACAATCCACAAGTCTACAACTACCTTGCATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

798

Amino Acids

91.81

Weight (kDa)

8.66

Isoelectric Point (pI)

50.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 101 - 542 6.2e-154 Cullin alpha solenoid domain
Cullin_AB PF26557 565 - 698 3.1e-48 Cullin alpha+beta domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011177)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 387, 1304
Acc36I ACCTGC 1 cut(s) 1333
Acc65I GGTACC 1 cut(s) 845
AccB1I GGYRCC 1 cut(s) 845
AccI GTMKAC 1 cut(s) 2376
AccII CGCG 3 cut(s) 180, 564, 2025
AccIII TCCGGA 1 cut(s) 648
AciI CCGC 7 cut(s) 175, 178, 202, 461, 1312, 1803, 2188
AclWI GGATC 2 cut(s) 543, 1485
AcoI YGGCCR 3 cut(s) 172, 481, 1712
AcsI RAATTY 2 cut(s) 836, 1825
AcuI CTGAAG 4 cut(s) 332, 1055, 1568, 1618
AdeI CACNNNGTG 1 cut(s) 1843
AfaI GTAC 8 cut(s) 276, 847, 890, 1082, 1381, 1709, 1799, 2345
AfiI CCNNNNNNNGG 8 cut(s) 208, 227, 496, 1653, 1702, 2116, 2137, 2353
AflII CTTAAG 2 cut(s) 1093, 2282
AflIII ACRYGT 1 cut(s) 898
AhdI GACNNNNNGTC 1 cut(s) 196
AjiI CACGTC 1 cut(s) 2056
AjnI CCWGG 3 cut(s) 1012, 1647, 1652
AjuI GAANNNNNNNTTGG 2 cut(s) 601, 633
Alw21I GWGCWC 4 cut(s) 402, 547, 684, 1005
Alw26I GTCTC 4 cut(s) 9, 105, 1732, 2046
Alw44I GTGCAC 1 cut(s) 398
AlwI GGATC 2 cut(s) 543, 1485
Ama87I CYCGRG 2 cut(s) 884, 1702
Aor13HI TCCGGA 1 cut(s) 648
AoxI GGCC 8 cut(s) 93, 127, 172, 210, 481, 697, 1650, 1712
ApaLI GTGCAC 1 cut(s) 398
ApeKI GCWGC 6 cut(s) 458, 868, 991, 2207, 2239, 2278
ApoI RAATTY 2 cut(s) 836, 1825
ArsI GACNNNNNNTTYG 2 cut(s) 1891, 1923
Asp700I GAANNNNTTC 1 cut(s) 239
Asp718I GGTACC 1 cut(s) 845
AspLEI GCGC 1 cut(s) 182
AspS9I GGNCC 2 cut(s) 211, 1066
AsuC2I CCSGG 1 cut(s) 228
AsuHPI GGTGA 2 cut(s) 660, 743
AsuII TTCGAA 2 cut(s) 336, 1987
AvaI CYCGRG 2 cut(s) 884, 1702
AvaII GGWCC 1 cut(s) 1066
BaeGI GKGCMC 2 cut(s) 402, 1406
BalI TGGCCA 2 cut(s) 483, 1714
BanI GGYRCC 1 cut(s) 845
BanII GRGCYC 1 cut(s) 1005
BbsI GAAGAC 3 cut(s) 1154, 1556, 1980
Bbv12I GWGCWC 4 cut(s) 402, 547, 684, 1005
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 6 cut(s) 470, 880, 1003, 2194, 2226, 2290
BccI CCATC 6 cut(s) 150, 400, 768, 1039, 1043, 1675
BceAI ACGGC 2 cut(s) 142, 187
BciT130I CCWGG 3 cut(s) 1014, 1649, 1654
BclI TGATCA 1 cut(s) 1164
BcnI CCSGG 1 cut(s) 228
BcoDI GTCTC 4 cut(s) 9, 105, 1732, 2046
BfaI CTAG 5 cut(s) 744, 998, 1965, 2232, 2348
BfmI CTRYAG 3 cut(s) 467, 981, 1997
BfrI CTTAAG 2 cut(s) 1093, 2282
BfuAI ACCTGC 1 cut(s) 1333
BglI GCCNNNNNGGC 1 cut(s) 269
BisI GCNGC 9 cut(s) 175, 178, 459, 462, 869, 992, 2208, 2240, 2279
BlpI GCTNAGC 2 cut(s) 1329, 1937
BlsI GCNGC 9 cut(s) 176, 179, 460, 463, 870, 993, 2209, 2241, 2280
BmcAI AGTACT 1 cut(s) 890
Bme1390I CCNGG 4 cut(s) 228, 1014, 1649, 1654
Bme18I GGWCC 1 cut(s) 1066
BmeRI GACNNNNNGTC 1 cut(s) 196
BmeT110I CYCGRG 2 cut(s) 884, 1702
BmgBI CACGTC 1 cut(s) 2056
BmgT120I GGNCC 2 cut(s) 211, 1066
BmiI GGNNCC 1 cut(s) 847
BmrFI CCNGG 4 cut(s) 228, 1014, 1649, 1654
BmsI GCATC 8 cut(s) 940, 1029, 1281, 1306, 1510, 1902, 1915, 2194
BoxI GACNNNNGTC 1 cut(s) 1642
BpiI GAAGAC 3 cut(s) 1154, 1556, 1980
BplI GAGNNNNNCTC 2 cut(s) 1729, 1761
Bpu10I CCTNAGC 2 cut(s) 222, 1130
Bpu1102I GCTNAGC 2 cut(s) 1329, 1937
Bpu14I TTCGAA 2 cut(s) 336, 1987
BpuEI CTTGAG 4 cut(s) 842, 1103, 1418, 1810
BpuMI CCSGG 1 cut(s) 228
BsaBI GATNNNNATC 1 cut(s) 1053
BsaJI CCNNGG 3 cut(s) 1647, 1701, 1728
BsaWI WCCGGW 1 cut(s) 648
BsaXI ACNNNNNCTCC 6 cut(s) 64, 94, 137, 167, 1708, 1738
Bsc4I CCNNNNNNNGG 8 cut(s) 208, 227, 496, 1653, 1702, 2116, 2137, 2353
Bse118I RCCGGY 2 cut(s) 268, 2299
Bse1I ACTGG 2 cut(s) 700, 1715
Bse8I GATNNNNATC 1 cut(s) 1053
BseAI TCCGGA 1 cut(s) 648
BseBI CCWGG 3 cut(s) 1014, 1649, 1654
BseDI CCNNGG 3 cut(s) 1647, 1701, 1728
BseGI GGATG 6 cut(s) 955, 1054, 1083, 1177, 1456, 1738
BseJI GATNNNNATC 1 cut(s) 1053
BseLI CCNNNNNNNGG 8 cut(s) 208, 227, 496, 1653, 1702, 2116, 2137, 2353
BseMII CTCAG 6 cut(s) 116, 236, 1320, 1515, 1673, 2234
BseNI ACTGG 2 cut(s) 700, 1715
BseRI GAGGAG 8 cut(s) 13, 34, 37, 57, 69, 142, 2091, 2165
BseSI GKGCMC 2 cut(s) 402, 1406
BseX3I CGGCCG 1 cut(s) 172
BseXI GCAGC 6 cut(s) 470, 880, 1003, 2194, 2226, 2290
BseYI CCCAGC 4 cut(s) 108, 183, 213, 1367
Bsh1236I CGCG 3 cut(s) 180, 564, 2025
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 8 cut(s) 95, 129, 174, 212, 483, 699, 1652, 1714
BshNI GGYRCC 1 cut(s) 845
BsiEI CGRYCG 1 cut(s) 175
BsiHKAI GWGCWC 4 cut(s) 402, 547, 684, 1005
BsiHKCI CYCGRG 2 cut(s) 884, 1702
BsiSI CCGG 4 cut(s) 228, 269, 649, 2300
BslFI GGGAC 5 cut(s) 91, 184, 641, 1630, 2369
BslI CCNNNNNNNGG 8 cut(s) 208, 227, 496, 1653, 1702, 2116, 2137, 2353
BsmAI GTCTC 4 cut(s) 9, 105, 1732, 2046
BsmBI CGTCTC 1 cut(s) 2046
BsmFI GGGAC 5 cut(s) 91, 184, 641, 1630, 2369
BsnI GGCC 8 cut(s) 95, 129, 174, 212, 483, 699, 1652, 1714
BsoBI CYCGRG 2 cut(s) 884, 1702
Bsp119I TTCGAA 2 cut(s) 336, 1987
Bsp1286I GDGCHC 5 cut(s) 402, 547, 684, 1005, 1406
Bsp13I TCCGGA 1 cut(s) 648
Bsp1407I TGTACA 1 cut(s) 1080
Bsp143I GATC 3 cut(s) 535, 1164, 1477
Bsp1720I GCTNAGC 2 cut(s) 1329, 1937
Bsp19I CCATGG 1 cut(s) 1728
BspACI CCGC 7 cut(s) 175, 178, 202, 461, 1312, 1803, 2188
BspANI GGCC 8 cut(s) 95, 129, 174, 212, 483, 699, 1652, 1714
BspCNI CTCAG 6 cut(s) 115, 235, 1321, 1516, 1674, 2235
BspEI TCCGGA 1 cut(s) 648
BspFNI CGCG 3 cut(s) 180, 564, 2025
BspHI TCATGA 1 cut(s) 1747
BspLI GGNNCC 1 cut(s) 847
BspMAI CTGCAG 3 cut(s) 471, 985, 2001
BspMI ACCTGC 1 cut(s) 1333
BspPI GGATC 2 cut(s) 543, 1485
BspT104I TTCGAA 2 cut(s) 336, 1987
BspT107I GGYRCC 1 cut(s) 845
BspTI CTTAAG 2 cut(s) 1093, 2282
BsrFI RCCGGY 2 cut(s) 268, 2299
BsrGI TGTACA 1 cut(s) 1080
BsrI ACTGG 2 cut(s) 700, 1715
BssAI RCCGGY 2 cut(s) 268, 2299
BssECI CCNNGG 3 cut(s) 1647, 1701, 1728
BssMI GATC 3 cut(s) 535, 1164, 1477
BssT1I CCWWGG 1 cut(s) 1728
Bst2UI CCWGG 3 cut(s) 1014, 1649, 1654
Bst4CI ACNGT 6 cut(s) 912, 1641, 1841, 1903, 2111, 2146
Bst6I CTCTTC 7 cut(s) 55, 67, 137, 285, 650, 1383, 2044
BstAFI CTTAAG 2 cut(s) 1093, 2282
BstAUI TGTACA 1 cut(s) 1080
BstBI TTCGAA 2 cut(s) 336, 1987
BstC8I GCNNGC 4 cut(s) 955, 1125, 1881, 2301
BstDEI CTNAG 8 cut(s) 102, 222, 1130, 1329, 1524, 1682, 1937, 2243
BstDSI CCRYGG 1 cut(s) 1728
BstF5I GGATG 6 cut(s) 955, 1054, 1083, 1177, 1456, 1738
BstFNI CGCG 3 cut(s) 180, 564, 2025
BstHHI GCGC 1 cut(s) 182
BstKTI GATC 3 cut(s) 538, 1167, 1480
BstMAI GTCTC 4 cut(s) 9, 105, 1732, 2046
BstMBI GATC 3 cut(s) 535, 1164, 1477
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 6 cut(s) 223, 269, 326, 1000, 1112, 1800
BstNI CCWGG 3 cut(s) 1014, 1649, 1654
BstNSI RCATGY 3 cut(s) 868, 902, 2013
BstPAI GACNNNNGTC 1 cut(s) 1642
BstSCI CCNGG 4 cut(s) 226, 1012, 1647, 1652
BstSFI CTRYAG 3 cut(s) 467, 981, 1997
BstSLI GKGCMC 2 cut(s) 402, 1406
BstUI CGCG 3 cut(s) 180, 564, 2025
BstV1I GCAGC 6 cut(s) 470, 880, 1003, 2194, 2226, 2290
BstV2I GAAGAC 3 cut(s) 1154, 1556, 1980
BstX2I RGATCY 2 cut(s) 535, 1477
BstXI CCANNNNNNTGG 1 cut(s) 1013
BstYI RGATCY 2 cut(s) 535, 1477
BstZI CGGCCG 1 cut(s) 172
BsuRI GGCC 8 cut(s) 95, 129, 174, 212, 483, 699, 1652, 1714
BtgI CCRYGG 1 cut(s) 1728
BtrI CACGTC 1 cut(s) 2056
BtsCI GGATG 6 cut(s) 955, 1054, 1083, 1177, 1456, 1738
BtsI GCAGTG 1 cut(s) 464
BtsIMutI CAGTG 4 cut(s) 464, 693, 1837, 2151
BveI ACCTGC 1 cut(s) 1333
Cac8I GCNNGC 4 cut(s) 955, 1125, 1881, 2301
CciI TCATGA 1 cut(s) 1747
CfoI GCGC 1 cut(s) 182
Cfr10I RCCGGY 2 cut(s) 268, 2299
Cfr13I GGNCC 2 cut(s) 211, 1066
CseI GACGC 3 cut(s) 346, 1295, 2014
Csp6I GTAC 8 cut(s) 275, 846, 889, 1081, 1380, 1708, 1798, 2344
CspCI CAANNNNNGTGG 2 cut(s) 1951, 1986
CviQI GTAC 8 cut(s) 275, 846, 889, 1081, 1380, 1708, 1798, 2344
DdeI CTNAG 8 cut(s) 102, 222, 1130, 1329, 1524, 1682, 1937, 2243
DpnI GATC 3 cut(s) 537, 1166, 1479
DpnII GATC 3 cut(s) 535, 1164, 1477
DraIII CACNNNGTG 1 cut(s) 1843
DriI GACNNNNNGTC 1 cut(s) 196
EaeI YGGCCR 3 cut(s) 172, 481, 1712
EagI CGGCCG 1 cut(s) 172
Eam1104I CTCTTC 7 cut(s) 55, 67, 137, 285, 650, 1383, 2044
Eam1105I GACNNNNNGTC 1 cut(s) 196
EarI CTCTTC 7 cut(s) 55, 67, 137, 285, 650, 1383, 2044
EciI GGCGGA 1 cut(s) 1301
Ecl136II GAGCTC 1 cut(s) 1003
EclXI CGGCCG 1 cut(s) 172
Eco130I CCWWGG 1 cut(s) 1728
Eco24I GRGCYC 1 cut(s) 1005
Eco47I GGWCC 1 cut(s) 1066
Eco52I CGGCCG 1 cut(s) 172
Eco53kI GAGCTC 1 cut(s) 1003
Eco57I CTGAAG 4 cut(s) 332, 1055, 1568, 1618
Eco88I CYCGRG 2 cut(s) 884, 1702
EcoICRI GAGCTC 1 cut(s) 1003
EcoO109I RGGNCCY 1 cut(s) 1066
EcoRII CCWGG 3 cut(s) 1012, 1647, 1652
EcoT14I CCWWGG 1 cut(s) 1728
EcoT38I GRGCYC 1 cut(s) 1005
ErhI CCWWGG 1 cut(s) 1728
Esp3I CGTCTC 1 cut(s) 2046
FalI AAGNNNNNCTT 4 cut(s) 1380, 1412, 1925, 1957
FaqI GGGAC 5 cut(s) 91, 184, 641, 1630, 2369
FauI CCCGC 1 cut(s) 209
FbaI TGATCA 1 cut(s) 1164
FblI GTMKAC 1 cut(s) 2376
Fnu4HI GCNGC 9 cut(s) 175, 178, 459, 462, 869, 992, 2208, 2240, 2279
FokI GGATG 6 cut(s) 962, 1061, 1090, 1184, 1463, 1745
FriOI GRGCYC 1 cut(s) 1005
Fsp4HI GCNGC 9 cut(s) 175, 178, 459, 462, 869, 992, 2208, 2240, 2279
FspBI CTAG 5 cut(s) 744, 998, 1965, 2232, 2348
GlaI GCGC 1 cut(s) 181
GluI GCNGC 9 cut(s) 175, 178, 459, 462, 869, 992, 2208, 2240, 2279
GsaI CCCAGC 4 cut(s) 112, 187, 217, 1371
HaeIII GGCC 8 cut(s) 95, 129, 174, 212, 483, 699, 1652, 1714
HapII CCGG 4 cut(s) 228, 269, 649, 2300
HgaI GACGC 3 cut(s) 346, 1295, 2014
HhaI GCGC 1 cut(s) 182
Hin6I GCGC 1 cut(s) 180
HinP1I GCGC 1 cut(s) 180
HindIII AAGCTT 2 cut(s) 1358, 1939
HpaII CCGG 4 cut(s) 228, 269, 649, 2300
HphI GGTGA 2 cut(s) 660, 743
Hpy166II GTNNAC 6 cut(s) 400, 938, 1035, 1083, 1572, 2377
Hpy8I GTNNAC 6 cut(s) 400, 938, 1035, 1083, 1572, 2377
Hpy99I CGWCG 3 cut(s) 167, 170, 173
HpyAV CCTTC 7 cut(s) 265, 845, 1079, 1468, 1580, 1642, 2131
HpyCH4III ACNGT 6 cut(s) 912, 1641, 1841, 1903, 2111, 2146
HpyCH4IV ACGT 1 cut(s) 2055
HpyF10VI GCNNNNNNNGC 6 cut(s) 223, 269, 326, 1000, 1112, 1800
HpyF3I CTNAG 8 cut(s) 102, 222, 1130, 1329, 1524, 1682, 1937, 2243
HpySE526I ACGT 1 cut(s) 2055
HspAI GCGC 1 cut(s) 180
Kpn2I TCCGGA 1 cut(s) 648
KpnI GGTACC 1 cut(s) 849
KroI GCCGGC 1 cut(s) 2299
KroNI GCCGGC 1 cut(s) 2301
Ksp22I TGATCA 1 cut(s) 1164
Kzo9I GATC 3 cut(s) 535, 1164, 1477
LmnI GCTCC 4 cut(s) 26, 1008, 1876, 2104
Lsp1109I GCAGC 6 cut(s) 470, 880, 1003, 2194, 2226, 2290
LweI GCATC 8 cut(s) 940, 1029, 1281, 1306, 1510, 1902, 1915, 2194
MaeI CTAG 5 cut(s) 744, 998, 1965, 2232, 2348
MaeII ACGT 1 cut(s) 2055
MaeIII GTNAC 5 cut(s) 691, 1835, 2001, 2037, 2246
MalI GATC 3 cut(s) 537, 1166, 1479
MboI GATC 3 cut(s) 535, 1164, 1477
MflI RGATCY 2 cut(s) 535, 1477
MhlI GDGCHC 5 cut(s) 402, 547, 684, 1005, 1406
MlsI TGGCCA 2 cut(s) 483, 1714
MluCI AATT 6 cut(s) 193, 687, 836, 1607, 1825, 2253
MluNI TGGCCA 2 cut(s) 483, 1714
MlyI GAGTC 5 cut(s) 110, 424, 742, 1637, 2254
MmeI TCCRAC 1 cut(s) 180
Mox20I TGGCCA 2 cut(s) 483, 1714
MroI TCCGGA 1 cut(s) 648
MroNI GCCGGC 1 cut(s) 2299
MroXI GAANNNNTTC 1 cut(s) 239
MscI TGGCCA 2 cut(s) 483, 1714
MslI CAYNNNNRTG 3 cut(s) 1727, 1733, 2008
Msp20I TGGCCA 2 cut(s) 483, 1714
MspA1I CMGCKG 2 cut(s) 461, 1803
MspCI CTTAAG 2 cut(s) 1093, 2282
MspI CCGG 4 cut(s) 228, 269, 649, 2300
MspR9I CCNGG 4 cut(s) 228, 1014, 1649, 1654
MvaI CCWGG 3 cut(s) 1014, 1649, 1654
MvnI CGCG 3 cut(s) 180, 564, 2025
MwoI GCNNNNNNNGC 6 cut(s) 223, 269, 326, 1000, 1112, 1800
NaeI GCCGGC 1 cut(s) 2301
NciI CCSGG 1 cut(s) 228
NcoI CCATGG 1 cut(s) 1728
NdeII GATC 3 cut(s) 535, 1164, 1477
NgoMIV GCCGGC 1 cut(s) 2299
NlaIV GGNNCC 1 cut(s) 847
NmeAIII GCCGAG 1 cut(s) 1954
NmuCI GTSAC 4 cut(s) 691, 1835, 2001, 2246
NspI RCATGY 3 cut(s) 868, 902, 2013
NspV TTCGAA 2 cut(s) 336, 1987
PagI TCATGA 1 cut(s) 1747
PciI ACATGT 1 cut(s) 898
PdiI GCCGGC 1 cut(s) 2301
PdmI GAANNNNTTC 1 cut(s) 239
PfeI GAWTC 5 cut(s) 429, 1054, 1318, 1958, 2069
PkrI GCNGC 9 cut(s) 176, 179, 460, 463, 870, 993, 2209, 2241, 2280
PleI GAGTC 5 cut(s) 110, 423, 742, 1636, 2253
PpsI GAGTC 5 cut(s) 110, 423, 742, 1636, 2253
PpuMI RGGWCCY 1 cut(s) 1066
PscI ACATGT 1 cut(s) 898
PshAI GACNNNNGTC 1 cut(s) 1642
PsiI TTATAA 2 cut(s) 387, 1304
Psp124BI GAGCTC 1 cut(s) 1005
Psp5II RGGWCCY 1 cut(s) 1066
Psp6I CCWGG 3 cut(s) 1012, 1647, 1652
PspFI CCCAGC 4 cut(s) 108, 183, 213, 1367
PspGI CCWGG 3 cut(s) 1012, 1647, 1652
PspN4I GGNNCC 1 cut(s) 847
PspPI GGNCC 2 cut(s) 211, 1066
PspPPI RGGWCCY 1 cut(s) 1066
PstI CTGCAG 3 cut(s) 471, 985, 2001
PsuI RGATCY 2 cut(s) 535, 1477
RsaI GTAC 8 cut(s) 276, 847, 890, 1082, 1381, 1709, 1799, 2345
RsaNI GTAC 8 cut(s) 275, 846, 889, 1081, 1380, 1708, 1798, 2344
RseI CAYNNNNRTG 3 cut(s) 1727, 1733, 2008
SacI GAGCTC 1 cut(s) 1005
SatI GCNGC 9 cut(s) 175, 178, 459, 462, 869, 992, 2208, 2240, 2279
Sau3AI GATC 3 cut(s) 535, 1164, 1477
Sau96I GGNCC 2 cut(s) 211, 1066
ScaI AGTACT 1 cut(s) 890
SchI GAGTC 5 cut(s) 110, 424, 742, 1637, 2254
ScrFI CCNGG 4 cut(s) 228, 1014, 1649, 1654
SduI GDGCHC 5 cut(s) 402, 547, 684, 1005, 1406
SfaNI GCATC 8 cut(s) 940, 1029, 1281, 1306, 1510, 1902, 1915, 2194
SfcI CTRYAG 3 cut(s) 467, 981, 1997
SfuI TTCGAA 2 cut(s) 336, 1987
SinI GGWCC 1 cut(s) 1066
SmiMI CAYNNNNRTG 3 cut(s) 1727, 1733, 2008
SmlI CTYRAG 6 cut(s) 821, 1093, 1118, 1397, 1789, 2282
SmoI CTYRAG 6 cut(s) 821, 1093, 1118, 1397, 1789, 2282
Sse9I AATT 6 cut(s) 193, 687, 836, 1607, 1825, 2253
SsiI CCGC 7 cut(s) 175, 178, 202, 461, 1312, 1803, 2188
SspI AATATT 1 cut(s) 552
SspMI CTAG 5 cut(s) 744, 998, 1965, 2232, 2348
SstI GAGCTC 1 cut(s) 1005
StyD4I CCNGG 4 cut(s) 226, 1012, 1647, 1652
StyI CCWWGG 1 cut(s) 1728
TaaI ACNGT 6 cut(s) 912, 1641, 1841, 1903, 2111, 2146
TaiI ACGT 1 cut(s) 2058
TaqII GACCGA 1 cut(s) 1568
TasI AATT 6 cut(s) 193, 687, 836, 1607, 1825, 2253
TatI WGTACW 3 cut(s) 888, 1080, 1797
TauI GCSGC 3 cut(s) 177, 180, 464
TfiI GAWTC 5 cut(s) 429, 1054, 1318, 1958, 2069
TscAI CASTG 4 cut(s) 471, 700, 1844, 2151
TseFI GTSAC 4 cut(s) 691, 1835, 2001, 2246
TseI GCWGC 6 cut(s) 458, 868, 991, 2207, 2239, 2278
Tsp45I GTSAC 4 cut(s) 691, 1835, 2001, 2246
TspRI CASTG 4 cut(s) 471, 700, 1844, 2151
Vha464I CTTAAG 2 cut(s) 1093, 2282
VneI GTGCAC 1 cut(s) 398
VpaK11BI GGWCC 1 cut(s) 1066
XapI RAATTY 2 cut(s) 836, 1825
XbaI TCTAGA 1 cut(s) 997
XceI RCATGY 3 cut(s) 868, 902, 2013
XmiI GTMKAC 1 cut(s) 2376
XmnI GAANNNNTTC 1 cut(s) 239
XspI CTAG 5 cut(s) 744, 998, 1965, 2232, 2348
ZrmI AGTACT 1 cut(s) 890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.