Rmu_sc0009295.1_g000011

Belongs to the cullin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009295.1
OG0011177
Physical Location & Seq
Reverse (-)
42307 .. 49323
7017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009295.1_g000011.1.cds

Sequence Viewer

Length: 2382 bp
atgtctcaccccaacaaacgctcctcatcaaccaccaccacatcctcttcttcttcttctctcacgtcccctcctccgatgaaaaaggccaagtctcactctcagcccgacaccaaaaacggcctccaccaccacacccactccgacaacgacgacgacggccgccgcgcccagcccgacaatttgtcccgcaaaaaggcccagccccctcagcccggcaagaagcagttcgtcatcaaacccttcaaagccaaaccggcagtacccaaaaatcttgaagaggaaacatgggaaatactaaagtctgccatttgtgctatattcttaaagaaacccgtttcatgtgtcttggaggacctttaccaggccgtttacaatctttgcgtgcacaagatgggagggagtctgtatcagcgaattgaaaaagagtgtgaaagacacatagctgcggcactgcagtcattggttggccaaagcccagatttggtggttttcttatcacttgtcgagagatgttggcaggatctttgtgctcagatattgatgattcgtgatatagccctgtatcttgatagaacttatgtgaaacaaacaccaaatgtgcgttcgttgtgggacatgggtttgcaactgttccggaaacatctttccctctcaccagaagttgagcacaaaattgtcaccggccttttaagaatgatcgagaaagaaagattcggtgaagcggtggctaggactctccttaaccatctatcgaagatgtttatagctttaggaatctattcagagagtttcgagaagccatttcttgagtgtagttctgaattctatggtactgaaggagtgaaatacatgcagcaatcagatgttcccgagtacttgaaacatgtggagaaacggttgcatgaagaacatgaaaggtgtttactctacctggatgcaagcacaagaaagccattggttgcaactgcagaaaagcagcttctagagcgccatatatctgccatactcgacaaggggttcacaatgctgatggatgggaatcgcattgaggaccttcaaaggatgtatactcttttcttaagagtaaatgcccttgaatcactcaggcaagcccttagcttgtacattcggaagacagggcagggcatgatcatggatgaagaaaaagataaagacatggtttcttcccttttggagtttaaggcttctcttgacactatatgggaagaaagttttttcaaaaatgaagcgttttgcatcactataaaggacgcattcgagtatcttataaatctccgccagaatcgacctgctgagctgattgcaaagtttctggacgagaagcttcgagctgggaacaagggtacttccgaagaggaacttgagggcacacttgataaagtcttggttttatttaggtttatacagggtaaggatgtgtttgaagcattttacaagaaggatcttgcaaaaagactacttttggggaagagtgcttctattgatgcagagaagtctatgatttccaagctgaagactgagtgtggcagtcaatttacaaacaaactcgaaggaatgtttaaggatattgaattgtcgaaagagataaacgagtccttcagacagtcgtcccaggccagaacaaaactcccatcagggattgagcttagtgttcatgtccttacttcagggtactggccaacatatgctcccatggatgttagacttcctcatgaattgaatgtatatcaggatattttcaaagagttttacttgagcaagtacagcggtaggcgtttaatgtggcaaaattcattaggtcactgtgtgttaaaagcagagtttcctaaaggcagaaaggagcttgcagtttctctgtttcagactgttgttttgatgctgtttaatgatgctgagaagctaagctttcaagacattaaggattccactagcattgaggacaaggaactgagaagaactctgcagtcccttgcatgtggaaaagttcgtgtcctgcaaaagtttcccaaagggagagacgtggaggatgacgattcatttacattcaatgatacatttgcagctcctctataccgtattaaggtaaatgcaatccaaatgaaggaaacagtggaggagaacacaagcaccactgaaagagtattccaagaccgccaatatcagattgatgctgctattgtccggataatgaaaactaggaagctgctgagtcacacaattctgataactgaactgttccaacagcttaggttcccaataaagccggcagatttgaagaaaaggatcgagagcctgattgacagggagtacctagaacgggacaagaacaacccacaagtttacaactaccttgcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0000209 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009640 GO:0009648 GO:0009719 GO:0009725 GO:0009743 GO:0009755 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009987 GO:0010033 GO:0010099 GO:0010100 GO:0010154 GO:0010182 GO:0010228 GO:0016567 GO:0019538 GO:0019899 GO:0022414 GO:0023052 GO:0031461 GO:0031625 GO:0032446 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033554 GO:0034641 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048366 GO:0048367 GO:0048519 GO:0048572 GO:0048573 GO:0048575 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0061458 GO:0065007 GO:0070647 GO:0070887 GO:0071310 GO:0071322 GO:0071495 GO:0071704 GO:0080008 GO:0090304 GO:0090567 GO:0099402 GO:1901360 GO:1901564 GO:1901700 GO:1901701 GO:1902494 GO:1990234 GO:2000026 GO:2000030
KEGG Pathways
Metabolic & Signaling
ko03420 ko04120 map03420 map04120
Pfam Domains
Protein Families
Cullin Cullin_Nedd8

Protein Analysis

793

Amino Acids

91.45

Weight (kDa)

8.67

Isoelectric Point (pI)

49.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011177)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G46210
fragaria_vesca FvH4_3g05480 FvH4_3g05480 FvH4_3g05480
malus_domestica MD05G1283200.v1.1 MD10G1261500.v1.1
prunus_persica Prupe.4G081400_v2.0.a1
pyrus_communis pycom05g26250 pycom10g21770
rosa_chinensis RchiOBHm_Chr5g0014271
rosa_laevigata RLG00000032095
rosa_multiflora Rmu_co8222354.1_g000001 Rmu_sc0009295.1_g000011
rosa_roxburghii Rroxscaffold_1G00062300
rosa_rugosa Rorug05G0016700
rosa_samantha Rh5AG111100 Rh5BG108300 Rh5CG119900 Rh5DG106900
rosa_wichuraiana Rw5G009690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1292
Acc36I ACCTGC 1 cut(s) 1321
AccI GTMKAC 1 cut(s) 1070
AccII CGCG 1 cut(s) 168
AccIII TCCGGA 2 cut(s) 636, 2205
AciI CCGC 8 cut(s) 163, 166, 190, 449, 725, 1300, 1791, 2176
AclWI GGATC 3 cut(s) 531, 1473, 2315
AcoI YGGCCR 3 cut(s) 160, 469, 1700
AcsI RAATTY 2 cut(s) 824, 1813
AcuI CTGAAG 4 cut(s) 858, 1556, 1606, 1674
AdeI CACNNNGTG 1 cut(s) 1831
AfaI GTAC 8 cut(s) 264, 835, 878, 1127, 1369, 1697, 1787, 2333
AfiI CCNNNNNNNGG 7 cut(s) 196, 215, 364, 484, 2104, 2125, 2341
AflII CTTAAG 1 cut(s) 1081
AflIII ACRYGT 1 cut(s) 886
AhdI GACNNNNNGTC 1 cut(s) 184
AjiI CACGTC 2 cut(s) 66, 2044
AjnI CCWGG 3 cut(s) 363, 933, 1635
AjuI GAANNNNNNNTTGG 2 cut(s) 589, 621
Alw21I GWGCWC 3 cut(s) 390, 535, 672
Alw26I GTCTC 3 cut(s) 9, 99, 2034
Alw44I GTGCAC 1 cut(s) 386
AlwI GGATC 3 cut(s) 531, 1473, 2315
Ama87I CYCGRG 1 cut(s) 872
Aor13HI TCCGGA 2 cut(s) 636, 2205
AoxI GGCC 9 cut(s) 87, 121, 160, 198, 366, 469, 685, 1638, 1700
ApaLI GTGCAC 1 cut(s) 386
ApeKI GCWGC 6 cut(s) 446, 856, 979, 2084, 2195, 2227
ApoI RAATTY 2 cut(s) 824, 1813
ArsI GACNNNNNNTTYG 2 cut(s) 1879, 1911
Asp700I GAANNNNTTC 2 cut(s) 227, 781
AspLEI GCGC 2 cut(s) 170, 993
AspS9I GGNCC 3 cut(s) 199, 355, 1054
AsuC2I CCSGG 1 cut(s) 216
AsuHPI GGTGA 3 cut(s) 648, 673, 731
AvaI CYCGRG 1 cut(s) 872
AvaII GGWCC 2 cut(s) 355, 1054
BaeGI GKGCMC 2 cut(s) 390, 1394
BalI TGGCCA 2 cut(s) 471, 1702
BbsI GAAGAC 2 cut(s) 1142, 1544
Bbv12I GWGCWC 3 cut(s) 390, 535, 672
BbvCI CCTCAGC 1 cut(s) 210
BbvI GCAGC 6 cut(s) 433, 868, 991, 2096, 2182, 2214
BccI CCATC 5 cut(s) 388, 756, 1027, 1031, 1663
BceAI ACGGC 3 cut(s) 136, 175, 353
BciT130I CCWGG 3 cut(s) 365, 935, 1637
BclI TGATCA 1 cut(s) 1152
BcnI CCSGG 1 cut(s) 216
BcoDI GTCTC 3 cut(s) 9, 99, 2034
BfaI CTAG 5 cut(s) 732, 986, 1953, 2220, 2336
BfmI CTRYAG 3 cut(s) 455, 969, 1985
BfoI RGCGCY 1 cut(s) 994
BfrI CTTAAG 1 cut(s) 1081
BfuAI ACCTGC 1 cut(s) 1321
BglI GCCNNNNNGGC 1 cut(s) 257
BisI GCNGC 9 cut(s) 163, 166, 447, 450, 857, 980, 2085, 2196, 2228
BlpI GCTNAGC 2 cut(s) 1317, 1925
BlsI GCNGC 9 cut(s) 164, 167, 448, 451, 858, 981, 2086, 2197, 2229
BmcAI AGTACT 1 cut(s) 878
Bme1390I CCNGG 4 cut(s) 216, 365, 935, 1637
Bme18I GGWCC 2 cut(s) 355, 1054
BmeRI GACNNNNNGTC 1 cut(s) 184
BmeT110I CYCGRG 1 cut(s) 872
BmgBI CACGTC 2 cut(s) 66, 2044
BmgT120I GGNCC 3 cut(s) 199, 355, 1054
BmiI GGNNCC 1 cut(s) 2276
BmrFI CCNGG 4 cut(s) 216, 365, 935, 1637
BmsI GCATC 6 cut(s) 928, 1269, 1498, 1890, 1903, 2182
BoxI GACNNNNGTC 1 cut(s) 1630
BpiI GAAGAC 2 cut(s) 1142, 1544
BplI GAGNNNNNCTC 2 cut(s) 1966, 1998
Bpu10I CCTNAGC 3 cut(s) 210, 1118, 2270
Bpu1102I GCTNAGC 2 cut(s) 1317, 1925
BpuEI CTTGAG 3 cut(s) 830, 1406, 1798
BpuMI CCSGG 1 cut(s) 216
BsaBI GATNNNNATC 1 cut(s) 1041
BsaJI CCNNGG 2 cut(s) 1635, 1716
BsaWI WCCGGW 2 cut(s) 636, 2205
Bsc4I CCNNNNNNNGG 7 cut(s) 196, 215, 364, 484, 2104, 2125, 2341
Bse118I RCCGGY 3 cut(s) 256, 683, 2287
Bse1I ACTGG 1 cut(s) 1703
Bse8I GATNNNNATC 1 cut(s) 1041
BseAI TCCGGA 2 cut(s) 636, 2205
BseBI CCWGG 3 cut(s) 365, 935, 1637
BseDI CCNNGG 2 cut(s) 1635, 1716
BseGI GGATG 8 cut(s) 41, 943, 1042, 1071, 1165, 1444, 1726, 2056
BseJI GATNNNNATC 1 cut(s) 1041
BseLI CCNNNNNNNGG 7 cut(s) 196, 215, 364, 484, 2104, 2125, 2341
BseMII CTCAG 9 cut(s) 116, 224, 548, 1120, 1308, 1533, 1908, 1964, 2222
BseNI ACTGG 1 cut(s) 1703
BseRI GAGGAG 4 cut(s) 13, 63, 2079, 2153
BseSI GKGCMC 2 cut(s) 390, 1394
BseX3I CGGCCG 1 cut(s) 160
BseXI GCAGC 6 cut(s) 433, 868, 991, 2096, 2182, 2214
BseYI CCCAGC 3 cut(s) 171, 201, 1355
Bsh1236I CGCG 1 cut(s) 168
Bsh1285I CGRYCG 1 cut(s) 163
BshFI GGCC 9 cut(s) 89, 123, 162, 200, 368, 471, 687, 1640, 1702
BsiEI CGRYCG 1 cut(s) 163
BsiHKAI GWGCWC 3 cut(s) 390, 535, 672
BsiHKCI CYCGRG 1 cut(s) 872
BsiSI CCGG 6 cut(s) 216, 257, 637, 684, 2206, 2288
BslFI GGGAC 6 cut(s) 52, 172, 629, 1618, 1975, 2357
BslI CCNNNNNNNGG 7 cut(s) 196, 215, 364, 484, 2104, 2125, 2341
BsmAI GTCTC 3 cut(s) 9, 99, 2034
BsmBI CGTCTC 1 cut(s) 2034
BsmFI GGGAC 6 cut(s) 52, 172, 629, 1618, 1975, 2357
BsmI GAATGC 1 cut(s) 1277
BsnI GGCC 9 cut(s) 89, 123, 162, 200, 368, 471, 687, 1640, 1702
BsoBI CYCGRG 1 cut(s) 872
Bsp1286I GDGCHC 4 cut(s) 390, 535, 672, 1394
Bsp13I TCCGGA 2 cut(s) 636, 2205
Bsp1407I TGTACA 1 cut(s) 1125
Bsp143I GATC 5 cut(s) 523, 699, 1152, 1465, 2307
Bsp1720I GCTNAGC 2 cut(s) 1317, 1925
Bsp19I CCATGG 1 cut(s) 1716
BspACI CCGC 8 cut(s) 163, 166, 190, 449, 725, 1300, 1791, 2176
BspANI GGCC 9 cut(s) 89, 123, 162, 200, 368, 471, 687, 1640, 1702
BspCNI CTCAG 9 cut(s) 115, 223, 547, 1119, 1309, 1534, 1909, 1965, 2223
BspEI TCCGGA 2 cut(s) 636, 2205
BspFNI CGCG 1 cut(s) 168
BspHI TCATGA 1 cut(s) 1735
BspLI GGNNCC 1 cut(s) 2276
BspMAI CTGCAG 3 cut(s) 459, 973, 1989
BspMI ACCTGC 1 cut(s) 1321
BspPI GGATC 3 cut(s) 531, 1473, 2315
BspTI CTTAAG 1 cut(s) 1081
BsrFI RCCGGY 3 cut(s) 256, 683, 2287
BsrGI TGTACA 1 cut(s) 1125
BsrI ACTGG 1 cut(s) 1703
BssAI RCCGGY 3 cut(s) 256, 683, 2287
BssECI CCNNGG 2 cut(s) 1635, 1716
BssMI GATC 5 cut(s) 523, 699, 1152, 1465, 2307
BssNAI GTATAC 1 cut(s) 1071
BssT1I CCWWGG 1 cut(s) 1716
Bst1107I GTATAC 1 cut(s) 1071
Bst2UI CCWGG 3 cut(s) 365, 935, 1637
Bst4CI ACNGT 8 cut(s) 633, 900, 1629, 1829, 1891, 2099, 2134, 2259
Bst6I CTCTTC 4 cut(s) 52, 273, 1371, 1487
BstAFI CTTAAG 1 cut(s) 1081
BstAUI TGTACA 1 cut(s) 1125
BstC8I GCNNGC 5 cut(s) 386, 943, 1113, 1869, 2289
BstDSI CCRYGG 1 cut(s) 1716
BstENI CCTNNNNNAGG 1 cut(s) 362
BstF5I GGATG 8 cut(s) 41, 943, 1042, 1071, 1165, 1444, 1726, 2056
BstFNI CGCG 1 cut(s) 168
BstH2I RGCGCY 1 cut(s) 994
BstHHI GCGC 2 cut(s) 170, 993
BstKTI GATC 5 cut(s) 526, 702, 1155, 1468, 2310
BstMAI GTCTC 3 cut(s) 9, 99, 2034
BstMBI GATC 5 cut(s) 523, 699, 1152, 1465, 2307
BstMCI CGRYCG 1 cut(s) 163
BstMWI GCNNNNNNNGC 5 cut(s) 211, 257, 314, 988, 1788
BstNI CCWGG 3 cut(s) 365, 935, 1637
BstNSI RCATGY 3 cut(s) 856, 890, 2001
BstPAI GACNNNNGTC 1 cut(s) 1630
BstSCI CCNGG 4 cut(s) 214, 363, 933, 1635
BstSFI CTRYAG 3 cut(s) 455, 969, 1985
BstSLI GKGCMC 2 cut(s) 390, 1394
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 6 cut(s) 433, 868, 991, 2096, 2182, 2214
BstV2I GAAGAC 2 cut(s) 1142, 1544
BstX2I RGATCY 2 cut(s) 523, 1465
BstYI RGATCY 2 cut(s) 523, 1465
BstZ17I GTATAC 1 cut(s) 1071
BstZI CGGCCG 1 cut(s) 160
BsuRI GGCC 9 cut(s) 89, 123, 162, 200, 368, 471, 687, 1640, 1702
BtgI CCRYGG 1 cut(s) 1716
BtrI CACGTC 2 cut(s) 66, 2044
BtsCI GGATG 8 cut(s) 41, 943, 1042, 1071, 1165, 1444, 1726, 2056
BtsI GCAGTG 1 cut(s) 452
BtsIMutI CAGTG 4 cut(s) 452, 1825, 2139, 2154
BveI ACCTGC 1 cut(s) 1321
Cac8I GCNNGC 5 cut(s) 386, 943, 1113, 1869, 2289
CciI TCATGA 1 cut(s) 1735
CfoI GCGC 2 cut(s) 170, 993
Cfr10I RCCGGY 3 cut(s) 256, 683, 2287
Cfr13I GGNCC 3 cut(s) 199, 355, 1054
CseI GACGC 1 cut(s) 1283
Csp6I GTAC 8 cut(s) 263, 834, 877, 1126, 1368, 1696, 1786, 2332
CspCI CAANNNNNGTGG 2 cut(s) 1939, 1974
CviQI GTAC 8 cut(s) 263, 834, 877, 1126, 1368, 1696, 1786, 2332
DpnI GATC 5 cut(s) 525, 701, 1154, 1467, 2309
DpnII GATC 5 cut(s) 523, 699, 1152, 1465, 2307
DraIII CACNNNGTG 1 cut(s) 1831
DriI GACNNNNNGTC 1 cut(s) 184
EaeI YGGCCR 3 cut(s) 160, 469, 1700
EagI CGGCCG 1 cut(s) 160
Eam1104I CTCTTC 4 cut(s) 52, 273, 1371, 1487
Eam1105I GACNNNNNGTC 1 cut(s) 184
EarI CTCTTC 4 cut(s) 52, 273, 1371, 1487
EciI GGCGGA 1 cut(s) 1289
EclXI CGGCCG 1 cut(s) 160
Eco130I CCWWGG 1 cut(s) 1716
Eco47I GGWCC 2 cut(s) 355, 1054
Eco52I CGGCCG 1 cut(s) 160
Eco57I CTGAAG 4 cut(s) 858, 1556, 1606, 1674
Eco88I CYCGRG 1 cut(s) 872
EcoNI CCTNNNNNAGG 1 cut(s) 362
EcoO109I RGGNCCY 2 cut(s) 355, 1054
EcoRI GAATTC 1 cut(s) 824
EcoRII CCWGG 3 cut(s) 363, 933, 1635
EcoT14I CCWWGG 1 cut(s) 1716
ErhI CCWWGG 1 cut(s) 1716
Esp3I CGTCTC 1 cut(s) 2034
FalI AAGNNNNNCTT 4 cut(s) 1368, 1400, 1913, 1945
FaqI GGGAC 6 cut(s) 52, 172, 629, 1618, 1975, 2357
FauI CCCGC 1 cut(s) 197
FauNDI CATATG 1 cut(s) 1708
FbaI TGATCA 1 cut(s) 1152
FblI GTMKAC 1 cut(s) 1070
Fnu4HI GCNGC 9 cut(s) 163, 166, 447, 450, 857, 980, 2085, 2196, 2228
FokI GGATG 8 cut(s) 28, 950, 1049, 1078, 1172, 1451, 1733, 2063
Fsp4HI GCNGC 9 cut(s) 163, 166, 447, 450, 857, 980, 2085, 2196, 2228
FspBI CTAG 5 cut(s) 732, 986, 1953, 2220, 2336
GlaI GCGC 2 cut(s) 169, 992
GluI GCNGC 9 cut(s) 163, 166, 447, 450, 857, 980, 2085, 2196, 2228
GsaI CCCAGC 3 cut(s) 175, 205, 1359
HaeII RGCGCY 1 cut(s) 994
HaeIII GGCC 9 cut(s) 89, 123, 162, 200, 368, 471, 687, 1640, 1702
HapII CCGG 6 cut(s) 216, 257, 637, 684, 2206, 2288
HgaI GACGC 1 cut(s) 1283
HhaI GCGC 2 cut(s) 170, 993
Hin6I GCGC 2 cut(s) 168, 991
HinP1I GCGC 2 cut(s) 168, 991
HindIII AAGCTT 2 cut(s) 1346, 1927
HpaII CCGG 6 cut(s) 216, 257, 637, 684, 2206, 2288
HphI GGTGA 3 cut(s) 648, 673, 731
Hpy166II GTNNAC 6 cut(s) 373, 388, 926, 1023, 1071, 2365
Hpy8I GTNNAC 6 cut(s) 373, 388, 926, 1023, 1071, 2365
Hpy99I CGWCG 3 cut(s) 155, 158, 161
HpyAV CCTTC 7 cut(s) 253, 833, 1067, 1456, 1568, 1630, 2119
HpyCH4III ACNGT 8 cut(s) 633, 900, 1629, 1829, 1891, 2099, 2134, 2259
HpyCH4IV ACGT 2 cut(s) 65, 2043
HpyF10VI GCNNNNNNNGC 5 cut(s) 211, 257, 314, 988, 1788
HpySE526I ACGT 2 cut(s) 65, 2043
HspAI GCGC 2 cut(s) 168, 991
Kpn2I TCCGGA 2 cut(s) 636, 2205
KroI GCCGGC 1 cut(s) 2287
KroNI GCCGGC 1 cut(s) 2289
Ksp22I TGATCA 1 cut(s) 1152
Kzo9I GATC 5 cut(s) 523, 699, 1152, 1465, 2307
LmnI GCTCC 4 cut(s) 26, 1717, 1864, 2092
Lsp1109I GCAGC 6 cut(s) 433, 868, 991, 2096, 2182, 2214
LweI GCATC 6 cut(s) 928, 1269, 1498, 1890, 1903, 2182
MaeI CTAG 5 cut(s) 732, 986, 1953, 2220, 2336
MaeII ACGT 2 cut(s) 65, 2043
MaeIII GTNAC 3 cut(s) 679, 1823, 2234
MalI GATC 5 cut(s) 525, 701, 1154, 1467, 2309
MboI GATC 5 cut(s) 523, 699, 1152, 1465, 2307
MflI RGATCY 2 cut(s) 523, 1465
MhlI GDGCHC 4 cut(s) 390, 535, 672, 1394
MlsI TGGCCA 2 cut(s) 471, 1702
MluCI AATT 9 cut(s) 181, 417, 675, 824, 1556, 1595, 1739, 1813, 2241
MluNI TGGCCA 2 cut(s) 471, 1702
MlyI GAGTC 4 cut(s) 412, 730, 1625, 2242
MmeI TCCRAC 2 cut(s) 168, 2287
Mox20I TGGCCA 2 cut(s) 471, 1702
MroI TCCGGA 2 cut(s) 636, 2205
MroNI GCCGGC 1 cut(s) 2287
MroXI GAANNNNTTC 2 cut(s) 227, 781
MscI TGGCCA 2 cut(s) 471, 1702
MslI CAYNNNNRTG 1 cut(s) 1154
Msp20I TGGCCA 2 cut(s) 471, 1702
MspA1I CMGCKG 1 cut(s) 1791
MspCI CTTAAG 1 cut(s) 1081
MspI CCGG 6 cut(s) 216, 257, 637, 684, 2206, 2288
MspR9I CCNGG 4 cut(s) 216, 365, 935, 1637
Mva1269I GAATGC 1 cut(s) 1277
MvaI CCWGG 3 cut(s) 365, 935, 1637
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 5 cut(s) 211, 257, 314, 988, 1788
NaeI GCCGGC 1 cut(s) 2289
NciI CCSGG 1 cut(s) 216
NcoI CCATGG 1 cut(s) 1716
NdeI CATATG 1 cut(s) 1708
NdeII GATC 5 cut(s) 523, 699, 1152, 1465, 2307
NgoMIV GCCGGC 1 cut(s) 2287
NlaIV GGNNCC 1 cut(s) 2276
NmuCI GTSAC 3 cut(s) 679, 1823, 2234
NspI RCATGY 3 cut(s) 856, 890, 2001
PagI TCATGA 1 cut(s) 1735
PciI ACATGT 1 cut(s) 886
PctI GAATGC 1 cut(s) 1277
PdiI GCCGGC 1 cut(s) 2289
PdmI GAANNNNTTC 2 cut(s) 227, 781
PfeI GAWTC 8 cut(s) 547, 714, 777, 1042, 1100, 1306, 1946, 2057
PkrI GCNGC 9 cut(s) 164, 167, 448, 451, 858, 981, 2086, 2197, 2229
PleI GAGTC 4 cut(s) 411, 730, 1624, 2241
PpsI GAGTC 4 cut(s) 411, 730, 1624, 2241
PpuMI RGGWCCY 2 cut(s) 355, 1054
PscI ACATGT 1 cut(s) 886
PshAI GACNNNNGTC 1 cut(s) 1630
PsiI TTATAA 1 cut(s) 1292
Psp5II RGGWCCY 2 cut(s) 355, 1054
Psp6I CCWGG 3 cut(s) 363, 933, 1635
PspFI CCCAGC 3 cut(s) 171, 201, 1355
PspGI CCWGG 3 cut(s) 363, 933, 1635
PspN4I GGNNCC 1 cut(s) 2276
PspPI GGNCC 3 cut(s) 199, 355, 1054
PspPPI RGGWCCY 2 cut(s) 355, 1054
PstI CTGCAG 3 cut(s) 459, 973, 1989
PsuI RGATCY 2 cut(s) 523, 1465
RsaI GTAC 8 cut(s) 264, 835, 878, 1127, 1369, 1697, 1787, 2333
RsaNI GTAC 8 cut(s) 263, 834, 877, 1126, 1368, 1696, 1786, 2332
RseI CAYNNNNRTG 1 cut(s) 1154
SatI GCNGC 9 cut(s) 163, 166, 447, 450, 857, 980, 2085, 2196, 2228
Sau3AI GATC 5 cut(s) 523, 699, 1152, 1465, 2307
Sau96I GGNCC 3 cut(s) 199, 355, 1054
ScaI AGTACT 1 cut(s) 878
SchI GAGTC 4 cut(s) 412, 730, 1625, 2242
ScrFI CCNGG 4 cut(s) 216, 365, 935, 1637
SduI GDGCHC 4 cut(s) 390, 535, 672, 1394
SfaNI GCATC 6 cut(s) 928, 1269, 1498, 1890, 1903, 2182
SfcI CTRYAG 3 cut(s) 455, 969, 1985
SinI GGWCC 2 cut(s) 355, 1054
SmiMI CAYNNNNRTG 1 cut(s) 1154
SmlI CTYRAG 4 cut(s) 809, 1081, 1385, 1777
SmoI CTYRAG 4 cut(s) 809, 1081, 1385, 1777
Sse9I AATT 9 cut(s) 181, 417, 675, 824, 1556, 1595, 1739, 1813, 2241
SsiI CCGC 8 cut(s) 163, 166, 190, 449, 725, 1300, 1791, 2176
SspMI CTAG 5 cut(s) 732, 986, 1953, 2220, 2336
StyD4I CCNGG 4 cut(s) 214, 363, 933, 1635
StyI CCWWGG 1 cut(s) 1716
TaaI ACNGT 8 cut(s) 633, 900, 1629, 1829, 1891, 2099, 2134, 2259
TaiI ACGT 2 cut(s) 68, 2046
TasI AATT 9 cut(s) 181, 417, 675, 824, 1556, 1595, 1739, 1813, 2241
TatI WGTACW 3 cut(s) 876, 1125, 1785
TauI GCSGC 3 cut(s) 165, 168, 452
TfiI GAWTC 8 cut(s) 547, 714, 777, 1042, 1100, 1306, 1946, 2057
TscAI CASTG 4 cut(s) 459, 1832, 2139, 2161
TseFI GTSAC 3 cut(s) 679, 1823, 2234
TseI GCWGC 6 cut(s) 446, 856, 979, 2084, 2195, 2227
Tsp45I GTSAC 3 cut(s) 679, 1823, 2234
TspRI CASTG 4 cut(s) 459, 1832, 2139, 2161
Vha464I CTTAAG 1 cut(s) 1081
VneI GTGCAC 1 cut(s) 386
VpaK11BI GGWCC 2 cut(s) 355, 1054
XagI CCTNNNNNAGG 1 cut(s) 362
XapI RAATTY 2 cut(s) 824, 1813
XbaI TCTAGA 1 cut(s) 985
XceI RCATGY 3 cut(s) 856, 890, 2001
XmiI GTMKAC 1 cut(s) 1070
XmnI GAANNNNTTC 2 cut(s) 227, 781
XspI CTAG 5 cut(s) 732, 986, 1953, 2220, 2336
ZrmI AGTACT 1 cut(s) 878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.