Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0009149

Physical Location & Seq

Genomic Coordinates Forward (+)

3683328 .. 3688922

Gene Structure 5595 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g06410.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGCAGAGAGCTTCCATTCTCTGTTCTTCAAGTCCACTCCTCCCCACTTTCCCACCCACGACTCATAAACTGGCTGCCGCTTCCCTTCAAACTCGGCACCTTCGTCTCGACTCAGTTTCCTCACCTCTCCGACTTCCCCTGAATCCTCTGCACAGTTACCGCCTTGCCCTCCCTCCTCTACACTCCACTGCCACTGAAGAGATTGTTGAGACTGCTGAGGCGGAGTCAGGATTCGTCAGTGTTGGTTATGTGGCCAATGTCCATGGGCTTCAAGGAGAGATTCGTGTGAAACCTAGCACTGACTTTCCTGAACTGCGGTTTGCTGAGCCTGGAAGAAGATGGTTGCGACAACAATCACTAGGCCAAGAAAGGGTGCAAGAAGTGGAGCTGGTGGAGGGAAGAGGACACCCTGGCCAGAAGAGTTGGATACTTAAGTTGAGAGGAATTGACGACGTGGACCAGGCTAGGCAGCTTATTGGTTCAACTTTACTTGTGAGGGAAGAAGATAGGCCACAGTTGGAAGATGGTGAAATCTATACTCGTGATCTTGTCGGAATGAGAGTTATTCTCAAGGAAACAGGTAAACCTGTGGGAAACGTGGTTAATGTTTTCAACAGCGGAGCGAGTGATCTTCTACAAGTCATGCTGGATTCATCGTTTAATATTCTTGACTCAACTGGCAAGCCAAAGCCAGCAGGAACAACATTATCTGGTCACCTTGTGTTGATACCATTTGTCGAAGAAATTGTTCCAGATGTTGATATAAAGAGAAAAGAAATGCAGATTACACCTCCAAAGGGACTCCTTGAACTAAATTTACGCTTTGATGAGAGGTCAAAGAAAGAAAGGCGCCAGATTGAATGGAAAGAGAGAAAAAAGTCTCAGAAGCGCCTCATAGCAGCAAAAAAGAAGCTGTGTGAAATGGATCAAAAACATGTGTTTGATGGGTTAAGATTTGGAGAGAAAGCACAACGGAGCTTACTTGCTGATCAGATTGTCAGTGTTAATTCACTGTTGCTTCAACAAGCTCTAGATAATGTAGAGATACATTCTAAAAGATTGAATGTGACTGAGATGGTCAGTGTGCTTAAAGCAGAAGAAACGAGCAGTACTCTGGAAATATCAGAGAAATGTCTCATTTCTTCTGCAAGCGAAGATAAGCTGGGTACACATTTCCATTATCAACAGACGGGAGTAGATCTTATATCTAAAGGCAAGGTTGCCATTGCTTTAGTTGTAAACAATTCCGACGACCCAGAGAACTCGATGGTTTCCTTTCAGACATTACTTTGTGACGATCAGAGATTCGTAAAGATGGAAGATCGTGCCTCAGTTCCTTTGATTTTGGTTTGTTCAGCTCAGAAAATTGATTCTTTAAGGATGCATTTCTCAGAAAATGATTACTTTGGCTTTGACTCCGAAAAGGTCCAATTCTTCGAGGAAGAGAAACTTCCAGTTGTCAGCAGTTCAGTGGAAGATGAGAAGAAGCATAAGATTCTGATGAAATCACCTTGGGAAATTCTCCAGTCACCAGTTGGATCAGGAGGAGTTTTTAGCTTGCTTTCTTCAAACAATGTTCCAGAGAATCTAAGTGAAATGGGTGTCGAGTATATTGAGATATGCAGCAGCCATCCAAGAAATATAAGTCCCAACTCACTACTTCTCGGGTTTGTTAATACGAGCAAAGCTGATATCGGGATCCAAATCTTCAAAGATACAAACGACTACGAAGAGAGTTTCAACATGATATTCACAACAGACTATATGAAGAAGCTGACAAAGCAACTCGATAAACTCCAGTTCAGTGCGACCACAAAGCAAAATGCGCATGTCGAGATGGTGGACAAGGAGTGGGTTGATGTTAACCCCAGTTCTCCCAACTCATATGAATTTGATTGCACCATTTACAGCTCGTTAAAGGCCTGTTCTTTCGACAAGCTTTGTATAATGGAGGTCACAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 ko01130 map00520 map01100 map01130

Pfam Domains

Protein Families

PRC RimM UDPGP

Protein Analysis

655

Amino Acids

73.51

Weight (kDa)

5.73

Isoelectric Point (pI)

51.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RimM	PF01782	81 - 168	8.8e-21	RimM N-terminal domain
PRC	PF05239	176 - 269	5e-09	PRC-barrel domain
PRC_RimM	PF24986	182 - 268	5.6e-13	RimM PRC barrel domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009149)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46420
fragaria_vesca	FvH4_3g06410 FvH4_3g06410 FvH4_3g06410 FvH4_3g06410 FvH4_3g06410 FvH4_3g06410 FvH4_3g06410
malus_domestica	MD05G1291800.v1.1
prunus_persica	Prupe.4G073700_v2.0.a1
pyrus_communis	pycom05g26830
rosa_chinensis	RchiOBHm_Chr5g0012901
rosa_laevigata	RLG00000031967
rosa_multiflora	Rmu_co8505517.1_g000001 Rmu_sc0010496.1_g000008
rosa_roxburghii	Rroxscaffold_1G00063680
rosa_rugosa	Rorug05G0005100
rosa_samantha	Rh5AG099300 Rh5BG095900 Rh5CG108200 Rh5DG094600
rosa_wichuraiana	Rw5G008670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1827
AccB1I	GGYRCC	2 cut(s)	96, 849
AciI	CCGC	5 cut(s)	78, 160, 221, 316, 618
AclWI	GGATC	4 cut(s)	933, 1546, 1693, 1706
AcoI	YGGCCR	2 cut(s)	252, 412
AcsI	RAATTY	3 cut(s)	814, 1518, 1889
AcuI	CTGAAG	1 cut(s)	216
AcyI	GRCGYC	1 cut(s)	850
AdeI	CACNNNGTG	2 cut(s)	721, 1962
AfaI	GTAC	2 cut(s)	1111, 1168
AfiI	CCNNNNNNNGG	2 cut(s)	370, 797
AflII	CTTAAG	1 cut(s)	431
AflIII	ACRYGT	1 cut(s)	934
AjiI	CACGTC	1 cut(s)	454
AjnI	CCWGG	3 cut(s)	328, 409, 459
Alw26I	GTCTC	4 cut(s)	110, 203, 885, 1139
AlwI	GGATC	4 cut(s)	933, 1546, 1693, 1706
Ama87I	CYCGRG	1 cut(s)	1664
AoxI	GGCC	5 cut(s)	252, 361, 412, 509, 1920
ApeKI	GCWGC	5 cut(s)	74, 469, 899, 1623, 1626
ApoI	RAATTY	3 cut(s)	814, 1518, 1889
Asp700I	GAANNNNTTC	1 cut(s)	747
AspLEI	GCGC	3 cut(s)	852, 891, 1828
AspS9I	GGNCC	2 cut(s)	457, 1426
AsuHPI	GGTGA	5 cut(s)	114, 539, 707, 1500, 1521
AvaI	CYCGRG	1 cut(s)	1664
AvaII	GGWCC	2 cut(s)	457, 1426
BaeI	ACNNNNGTAYC	2 cut(s)	419, 452
BalI	TGGCCA	2 cut(s)	254, 414
BamHI	GGATCC	1 cut(s)	1698
BanI	GGYRCC	2 cut(s)	96, 849
BauI	CACGAG	1 cut(s)	540
BbvCI	CCTCAGC	1 cut(s)	216
BbvI	GCAGC	5 cut(s)	61, 481, 911, 1635, 1638
BccI	CCATC	8 cut(s)	333, 518, 938, 1069, 1261, 1309, 1638, 1831
BciT130I	CCWGG	3 cut(s)	330, 411, 461
BciVI	GTATCC	1 cut(s)	420
BclI	TGATCA	1 cut(s)	988
BcoDI	GTCTC	4 cut(s)	110, 203, 885, 1139
BfaI	CTAG	4 cut(s)	294, 359, 465, 1031
BfoI	RGCGCY	2 cut(s)	853, 892
BfrI	CTTAAG	1 cut(s)	431
BfuI	GTATCC	1 cut(s)	420
BglII	AGATCT	1 cut(s)	1198
BisI	GCNGC	6 cut(s)	75, 78, 470, 900, 1624, 1627
BlpI	GCTNAGC	1 cut(s)	324
BlsI	GCNGC	6 cut(s)	76, 79, 471, 901, 1625, 1628
BmcAI	AGTACT	1 cut(s)	1111
Bme1390I	CCNGG	3 cut(s)	330, 411, 461
Bme18I	GGWCC	2 cut(s)	457, 1426
BmeT110I	CYCGRG	1 cut(s)	1664
BmgBI	CACGTC	1 cut(s)	454
BmgT120I	GGNCC	2 cut(s)	457, 1426
BmiI	GGNNCC	3 cut(s)	98, 851, 1700
BmrFI	CCNGG	3 cut(s)	330, 411, 461
BmrI	ACTGGG	1 cut(s)	1863
BmsI	GCATC	1 cut(s)	1371
BmuI	ACTGGG	1 cut(s)	1863
BplI	GAGNNNNNCTC	4 cut(s)	552, 584, 1096, 1128
BpmI	CTGGAG	2 cut(s)	1508, 1781
Bpu10I	CCTNAGC	1 cut(s)	216
Bpu1102I	GCTNAGC	1 cut(s)	324
BpuEI	CTTGAG	1 cut(s)	554
BsaBI	GATNNNNATC	1 cut(s)	1703
BsaHI	GRCGYC	1 cut(s)	850
BsaJI	CCNNGG	3 cut(s)	262, 409, 1511
Bsc4I	CCNNNNNNNGG	2 cut(s)	370, 797
Bse1I	ACTGG	7 cut(s)	75, 682, 1454, 1525, 1532, 1798, 1869
Bse3DI	GCAATG	1 cut(s)	1224
Bse8I	GATNNNNATC	1 cut(s)	1703
BseBI	CCWGG	3 cut(s)	330, 411, 461
BseDI	CCNNGG	3 cut(s)	262, 409, 1511
BseGI	GGATG	2 cut(s)	1386, 1630
BseJI	GATNNNNATC	1 cut(s)	1703
BseLI	CCNNNNNNNGG	2 cut(s)	370, 797
BseMI	GCAATG	1 cut(s)	1224
BseMII	CTCAG	8 cut(s)	126, 207, 315, 896, 1062, 1344, 1373, 1404
BseNI	ACTGG	7 cut(s)	75, 682, 1454, 1525, 1532, 1798, 1869
BseRI	GAGGAG	3 cut(s)	29, 165, 1560
BseXI	GCAGC	5 cut(s)	61, 481, 911, 1635, 1638
BseYI	CCCAGC	1 cut(s)	1162
BsgI	GTGCAG	1 cut(s)	134
BshFI	GGCC	5 cut(s)	254, 363, 414, 511, 1922
BshNI	GGYRCC	2 cut(s)	96, 849
BsiHKCI	CYCGRG	1 cut(s)	1664
BslFI	GGGAC	2 cut(s)	813, 1632
BslI	CCNNNNNNNGG	2 cut(s)	370, 797
BsmAI	GTCTC	4 cut(s)	110, 203, 885, 1139
BsmBI	CGTCTC	1 cut(s)	110
BsmFI	GGGAC	2 cut(s)	813, 1632
BsnI	GGCC	5 cut(s)	254, 363, 414, 511, 1922
BsoBI	CYCGRG	1 cut(s)	1664
Bsp143I	GATC	9 cut(s)	544, 628, 925, 988, 1198, 1297, 1321, 1538, 1698
Bsp1720I	GCTNAGC	1 cut(s)	324
Bsp19I	CCATGG	1 cut(s)	262
BspACI	CCGC	5 cut(s)	78, 160, 221, 316, 618
BspANI	GGCC	5 cut(s)	254, 363, 414, 511, 1922
BspCNI	CTCAG	8 cut(s)	125, 208, 316, 895, 1063, 1343, 1372, 1403
BspLI	GGNNCC	3 cut(s)	98, 851, 1700
BspPI	GGATC	4 cut(s)	933, 1546, 1693, 1706
BspT107I	GGYRCC	2 cut(s)	96, 849
BspTI	CTTAAG	1 cut(s)	431
BsrDI	GCAATG	1 cut(s)	1224
BsrI	ACTGG	7 cut(s)	75, 682, 1454, 1525, 1532, 1798, 1869
BssECI	CCNNGG	3 cut(s)	262, 409, 1511
BssMI	GATC	9 cut(s)	544, 628, 925, 988, 1198, 1297, 1321, 1538, 1698
BssNI	GRCGYC	1 cut(s)	850
BssSI	CACGAG	1 cut(s)	540
BssT1I	CCWWGG	2 cut(s)	262, 1511
Bst2BI	CACGAG	1 cut(s)	540
Bst2UI	CCWGG	3 cut(s)	330, 411, 461
Bst4CI	ACNGT	3 cut(s)	155, 516, 1014
Bst6I	CTCTTC	5 cut(s)	192, 394, 413, 1437, 1725
BstACI	GRCGYC	1 cut(s)	850
BstAFI	CTTAAG	1 cut(s)	431
BstC8I	GCNNGC	4 cut(s)	683, 693, 1150, 1559
BstDEI	CTNAG	9 cut(s)	112, 216, 324, 882, 1071, 1330, 1359, 1390, 1589
BstDSI	CCRYGG	1 cut(s)	262
BstEII	GGTNACC	1 cut(s)	713
BstF5I	GGATG	2 cut(s)	1386, 1630
BstH2I	RGCGCY	2 cut(s)	853, 892
BstHHI	GCGC	3 cut(s)	852, 891, 1828
BstKTI	GATC	9 cut(s)	547, 631, 928, 991, 1201, 1300, 1324, 1541, 1701
BstMAI	GTCTC	4 cut(s)	110, 203, 885, 1139
BstMBI	GATC	9 cut(s)	544, 628, 925, 988, 1198, 1297, 1321, 1538, 1698
BstMWI	GCNNNNNNNGC	2 cut(s)	1780, 1825
BstNI	CCWGG	3 cut(s)	330, 411, 461
BstNSI	RCATGY	2 cut(s)	938, 1832
BstPI	GGTNACC	1 cut(s)	713
BstSCI	CCNGG	3 cut(s)	328, 409, 459
BstV1I	GCAGC	5 cut(s)	61, 481, 911, 1635, 1638
BstX2I	RGATCY	2 cut(s)	1198, 1698
BstYI	RGATCY	2 cut(s)	1198, 1698
BsuI	GTATCC	1 cut(s)	420
BsuRI	GGCC	5 cut(s)	254, 363, 414, 511, 1922
BtgI	CCRYGG	1 cut(s)	262
BtrI	CACGTC	1 cut(s)	454
BtsCI	GGATG	2 cut(s)	1386, 1630
BtsI	GCAGTG	1 cut(s)	186
BtsIMutI	CAGTG	9 cut(s)	186, 192, 244, 297, 1006, 1010, 1087, 1476, 1810
Cac8I	GCNNGC	4 cut(s)	683, 693, 1150, 1559
CfoI	GCGC	3 cut(s)	852, 891, 1828
Cfr13I	GGNCC	2 cut(s)	457, 1426
Csp6I	GTAC	2 cut(s)	1110, 1167
CviAII	CATG	5 cut(s)	263, 643, 935, 1744, 1829
CviQI	GTAC	2 cut(s)	1110, 1167
DdeI	CTNAG	9 cut(s)	112, 216, 324, 882, 1071, 1330, 1359, 1390, 1589
DinI	GGCGCC	1 cut(s)	851
DpnI	GATC	9 cut(s)	546, 630, 927, 990, 1200, 1299, 1323, 1540, 1700
DpnII	GATC	9 cut(s)	544, 628, 925, 988, 1198, 1297, 1321, 1538, 1698
DraIII	CACNNNGTG	2 cut(s)	721, 1962
EaeI	YGGCCR	2 cut(s)	252, 412
Eam1104I	CTCTTC	5 cut(s)	192, 394, 413, 1437, 1725
EarI	CTCTTC	5 cut(s)	192, 394, 413, 1437, 1725
EciI	GGCGGA	1 cut(s)	236
Eco130I	CCWWGG	2 cut(s)	262, 1511
Eco147I	AGGCCT	1 cut(s)	1922
Eco32I	GATATC	1 cut(s)	1693
Eco47I	GGWCC	2 cut(s)	457, 1426
Eco57I	CTGAAG	1 cut(s)	216
Eco88I	CYCGRG	1 cut(s)	1664
Eco91I	GGTNACC	1 cut(s)	713
EcoO65I	GGTNACC	1 cut(s)	713
EcoRII	CCWGG	3 cut(s)	328, 409, 459
EcoRV	GATATC	1 cut(s)	1693
EcoT14I	CCWWGG	2 cut(s)	262, 1511
EcoT22I	ATGCAT	1 cut(s)	1386
EgeI	GGCGCC	1 cut(s)	851
EheI	GGCGCC	1 cut(s)	851
ErhI	CCWWGG	2 cut(s)	262, 1511
Esp3I	CGTCTC	1 cut(s)	110
FaeI	CATG	5 cut(s)	266, 646, 938, 1747, 1832
FalI	AAGNNNNNCTT	2 cut(s)	1434, 1466
FaqI	GGGAC	2 cut(s)	813, 1632
FatI	CATG	5 cut(s)	262, 642, 934, 1743, 1828
FauNDI	CATATG	1 cut(s)	1885
FbaI	TGATCA	1 cut(s)	988
Fnu4HI	GCNGC	6 cut(s)	75, 78, 470, 900, 1624, 1627
FokI	GGATG	2 cut(s)	1393, 1617
Fsp4HI	GCNGC	6 cut(s)	75, 78, 470, 900, 1624, 1627
FspAI	RTGCGCAY	1 cut(s)	1827
FspBI	CTAG	4 cut(s)	294, 359, 465, 1031
FspI	TGCGCA	1 cut(s)	1827
GlaI	GCGC	3 cut(s)	851, 890, 1827
GluI	GCNGC	6 cut(s)	75, 78, 470, 900, 1624, 1627
GsaI	CCCAGC	1 cut(s)	1166
GsuI	CTGGAG	2 cut(s)	1508, 1781
HaeII	RGCGCY	2 cut(s)	853, 892
HaeIII	GGCC	5 cut(s)	254, 363, 414, 511, 1922
HhaI	GCGC	3 cut(s)	852, 891, 1828
Hin1I	GRCGYC	1 cut(s)	850
Hin1II	CATG	5 cut(s)	266, 646, 938, 1747, 1832
Hin6I	GCGC	3 cut(s)	850, 889, 1826
HinP1I	GCGC	3 cut(s)	850, 889, 1826
HincII	GTYRAC	1 cut(s)	1864
HindII	GTYRAC	1 cut(s)	1864
HindIII	AAGCTT	1 cut(s)	1937
HpaI	GTTAAC	1 cut(s)	1864
HphI	GGTGA	5 cut(s)	114, 539, 707, 1500, 1521
Hpy166II	GTNNAC	7 cut(s)	35, 457, 584, 1169, 1240, 1843, 1864
Hpy8I	GTNNAC	7 cut(s)	35, 457, 584, 1169, 1240, 1843, 1864
Hpy99I	CGWCG	2 cut(s)	455, 1253
HpyAV	CCTTC	2 cut(s)	95, 110
HpyCH4III	ACNGT	3 cut(s)	155, 516, 1014
HpyCH4IV	ACGT	2 cut(s)	453, 597
HpyCH4V	TGCA	8 cut(s)	4, 151, 376, 781, 1148, 1384, 1623, 1899
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1780, 1825
HpyF3I	CTNAG	9 cut(s)	112, 216, 324, 882, 1071, 1330, 1359, 1390, 1589
HpySE526I	ACGT	2 cut(s)	453, 597
Hsp92I	GRCGYC	1 cut(s)	850
Hsp92II	CATG	5 cut(s)	266, 646, 938, 1747, 1832
HspAI	GCGC	3 cut(s)	850, 889, 1826
KasI	GGCGCC	1 cut(s)	849
Ksp22I	TGATCA	1 cut(s)	988
KspAI	GTTAAC	1 cut(s)	1864
Kzo9I	GATC	9 cut(s)	544, 628, 925, 988, 1198, 1297, 1321, 1538, 1698
LmnI	GCTCC	3 cut(s)	385, 620, 975
Lsp1109I	GCAGC	5 cut(s)	61, 481, 911, 1635, 1638
LweI	GCATC	1 cut(s)	1371
MaeI	CTAG	4 cut(s)	294, 359, 465, 1031
MaeII	ACGT	2 cut(s)	453, 597
MaeIII	GTNAC	6 cut(s)	155, 713, 1066, 1292, 1527, 1954
MalI	GATC	9 cut(s)	546, 630, 927, 990, 1200, 1299, 1323, 1540, 1700
MboI	GATC	9 cut(s)	544, 628, 925, 988, 1198, 1297, 1321, 1538, 1698
MflI	RGATCY	2 cut(s)	1198, 1698
MlsI	TGGCCA	2 cut(s)	254, 414
MluCI	AATT	9 cut(s)	444, 744, 814, 1006, 1243, 1365, 1430, 1518, 1889
MluNI	TGGCCA	2 cut(s)	254, 414
Mly113I	GGCGCC	1 cut(s)	850
MlyI	GAGTC	6 cut(s)	55, 104, 233, 665, 795, 1409
MmeI	TCCRAC	6 cut(s)	154, 404, 498, 532, 1272, 1516
Mox20I	TGGCCA	2 cut(s)	254, 414
Mph1103I	ATGCAT	1 cut(s)	1386
MroXI	GAANNNNTTC	1 cut(s)	747
MscI	TGGCCA	2 cut(s)	254, 414
Msp20I	TGGCCA	2 cut(s)	254, 414
MspA1I	CMGCKG	1 cut(s)	618
MspCI	CTTAAG	1 cut(s)	431
MspR9I	CCNGG	3 cut(s)	330, 411, 461
MvaI	CCWGG	3 cut(s)	330, 411, 461
MwoI	GCNNNNNNNGC	2 cut(s)	1780, 1825
NarI	GGCGCC	1 cut(s)	850
NcoI	CCATGG	1 cut(s)	262
NdeI	CATATG	1 cut(s)	1885
NdeII	GATC	9 cut(s)	544, 628, 925, 988, 1198, 1297, 1321, 1538, 1698
NlaIII	CATG	5 cut(s)	266, 646, 938, 1747, 1832
NlaIV	GGNNCC	3 cut(s)	98, 851, 1700
NmeAIII	GCCGAG	1 cut(s)	73
NmuCI	GTSAC	5 cut(s)	713, 1066, 1292, 1527, 1954
NsbI	TGCGCA	1 cut(s)	1827
NsiI	ATGCAT	1 cut(s)	1386
NspI	RCATGY	2 cut(s)	938, 1832
PceI	AGGCCT	1 cut(s)	1922
PciI	ACATGT	1 cut(s)	934
PcsI	WCGNNNNNNNCGW	1 cut(s)	100
PdmI	GAANNNNTTC	1 cut(s)	747
PfeI	GAWTC	8 cut(s)	142, 231, 280, 650, 1305, 1370, 1495, 1585
PkrI	GCNGC	6 cut(s)	76, 79, 471, 901, 1625, 1628
PleI	GAGTC	6 cut(s)	55, 104, 232, 665, 795, 1409
PluTI	GGCGCC	1 cut(s)	853
PpsI	GAGTC	6 cut(s)	55, 104, 232, 665, 795, 1409
PscI	ACATGT	1 cut(s)	934
Psp6I	CCWGG	3 cut(s)	328, 409, 459
PspEI	GGTNACC	1 cut(s)	713
PspFI	CCCAGC	1 cut(s)	1162
PspGI	CCWGG	3 cut(s)	328, 409, 459
PspN4I	GGNNCC	3 cut(s)	98, 851, 1700
PspPI	GGNCC	2 cut(s)	457, 1426
PsrI	GAACNNNNNNTAC	2 cut(s)	801, 833
PsuI	RGATCY	2 cut(s)	1198, 1698
RsaI	GTAC	2 cut(s)	1111, 1168
RsaNI	GTAC	2 cut(s)	1110, 1167
SatI	GCNGC	6 cut(s)	75, 78, 470, 900, 1624, 1627
Sau3AI	GATC	9 cut(s)	544, 628, 925, 988, 1198, 1297, 1321, 1538, 1698
Sau96I	GGNCC	2 cut(s)	457, 1426
ScaI	AGTACT	1 cut(s)	1111
SchI	GAGTC	6 cut(s)	55, 104, 233, 665, 795, 1409
ScrFI	CCNGG	3 cut(s)	330, 411, 461
SfaNI	GCATC	1 cut(s)	1371
SfoI	GGCGCC	1 cut(s)	851
SinI	GGWCC	2 cut(s)	457, 1426
SmlI	CTYRAG	2 cut(s)	431, 569
SmoI	CTYRAG	2 cut(s)	431, 569
Sse9I	AATT	9 cut(s)	444, 744, 814, 1006, 1243, 1365, 1430, 1518, 1889
SseBI	AGGCCT	1 cut(s)	1922
SsiI	CCGC	5 cut(s)	78, 160, 221, 316, 618
SspDI	GGCGCC	1 cut(s)	849
SspI	AATATT	1 cut(s)	664
SspMI	CTAG	4 cut(s)	294, 359, 465, 1031
StuI	AGGCCT	1 cut(s)	1922
StyD4I	CCNGG	3 cut(s)	328, 409, 459
StyI	CCWWGG	2 cut(s)	262, 1511
TaaI	ACNGT	3 cut(s)	155, 516, 1014
TaiI	ACGT	2 cut(s)	456, 600
TaqI	TCGA	8 cut(s)	108, 738, 1265, 1437, 1605, 1788, 1833, 1932
TasI	AATT	9 cut(s)	444, 744, 814, 1006, 1243, 1365, 1430, 1518, 1889
TatI	WGTACW	1 cut(s)	1109
TauI	GCSGC	1 cut(s)	80
TfiI	GAWTC	8 cut(s)	142, 231, 280, 650, 1305, 1370, 1495, 1585
TscAI	CASTG	9 cut(s)	193, 199, 244, 304, 1006, 1017, 1087, 1476, 1810
TseFI	GTSAC	5 cut(s)	713, 1066, 1292, 1527, 1954
TseI	GCWGC	5 cut(s)	74, 469, 899, 1623, 1626
Tsp45I	GTSAC	5 cut(s)	713, 1066, 1292, 1527, 1954
TspDTI	ATGAA	4 cut(s)	642, 1517, 1781, 1902
TspGWI	ACGGA	1 cut(s)	988
TspRI	CASTG	9 cut(s)	193, 199, 244, 304, 1006, 1017, 1087, 1476, 1810
Vha464I	CTTAAG	1 cut(s)	431
VpaK11BI	GGWCC	2 cut(s)	457, 1426
XapI	RAATTY	3 cut(s)	814, 1518, 1889
XbaI	TCTAGA	1 cut(s)	1030
XceI	RCATGY	2 cut(s)	938, 1832
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1532
XmnI	GAANNNNTTC	1 cut(s)	747
XspI	CTAG	4 cut(s)	294, 359, 465, 1031
ZrmI	AGTACT	1 cut(s)	1111
Zsp2I	ATGCAT	1 cut(s)	1386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.