Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0009149

Physical Location & Seq

Genomic Coordinates Forward (+)

42331134 .. 42348923

Gene Structure 17790 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1291800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGCAGAGAGCTTCTTCCATTCTCTGCTCTTCAAATCCACTTCCGGCTCTTCCCCCGACCTCTCACAGACTCGTCGCTCCGTTCCAAACTCGACCTACTCGTCCCGACTCAGTGCCCTCGCCCCTCCGGTTGCCCCTGACTCGTCTGCGCAATTACCGCCTTGCCCTCCCTCCTCTCCACAGCACTGTCTCTGAAGAGATTGTTGAGACTGCGACGGCGGAGTTAGGATTCACTCAAGTTGGGTACATATCGAATGTCCACGGGCTACAAGGGGAGATTCGTGTGAAACCCAGTACTGAATTTCCTGAATTGCGGTTTTCCAAGCCTGGAAAAAGATGGTTGAGACAGCAAGTATCAGGCAGAGAAATAATTCAAGAAGTTGAGCTGGTGGAGGGAAGAGGACACCCTGGTCAGAAGAGTTGGATACTGAGATTGGGAGGAATTGAAACAGTGGATGAGGCCAGACAGCTAATTGGTTCAGCTTTACTTGTGAGGGAAGAAGATAGGCCGCAGTTGGAGGAAGGCGAAATTTATACCCGTGATCTTGTTGGGATGAAAGTTATTCTTAAGGAAACTGGTGAACCTGTGGGAAGTGTTGTTAATGTTTTCAACAGCGGAGCAAGTGATCTTTTACAGGTCATGCTCGATACATCTCTAGATATTGTTGATTCAACTGGAAAACCAAAGCCAGCAGGAACAAGATTATCTGGTCACCTTGTGTGGATACCATTTGTCGAAGAAATTGTTCCAAATGTCGATATGAACAGGAAAGAAATGCAGATTACACCTCCAAAGGGACTCTTGGAACTAAATTTACGCTTTGATGAGAGGTCCAAGAAGGAAAGGCGCCAACTTGAATGGAAAGAGAGAAAAAAGTTGCAGAAGCGCCTCATAGCAGCAAAAAAGAAACTGTGTGATATGGAGCAAAAACATGTGTTCGATGGGTTAAGATTTGGAGAGAAAGCACAAAGAAGCTTACTTGCTGATCAGATTGTTGCTGTAAATTCGAAATTGCTTCAACAGGCTCTAGAAAATGTTCAGATACCATCCAAAAGATGGAATGTAACTGAGATGATCAATGCCCTTAAAGCCAGAGAAACAACTAGCACTCTGGAAATTTCAGAGAAATGTCTCGTGTCTTCTGCAAGCAAAGATAAGCTGGGTACACATCTTCATTTGCAAGAGAAAGGACTAGATCTCATATCGAAAGGAAAAGTTGCCATTGCTTTGGTTGTAAATGACAATGGAGATCAGCAAGGACCACAACTGGCCTCTAACCCTGATCTTGAAAATTCTGATGGCACTGAGACAATAATGTCGTCCTCTCTTCAGACATTACTTTGTGACGATCAAAGATTTGTAAAGATGGAAGATCGTGTGTCAGTACCTTTGGTTCTGGTTTGCTCGGCCCAGACAGTTCAATCTTTAAGGATGCATTTCTCAGAAAATGATTACTTTGGCTTCGTCCCTGAAAAGGTCTGGTTCTTAGAGGAAGAGAAACTTCCAGTTGTCAGCAATTCAGTGGAAGAAGAAAAGAAGCATAAGATTTTGATGAAATCCCCTTGGGAAATACTTCAATTGCCGGTTGGATCTGGCGGAGTTTTCAGTTTGCTTTCATCAAACAATATTCCAGAGAATCTCAGTGAAATGGGTGTGGAGTATATTGAGGTTTGCAGCACCAATCCTGGACACGTAGGTGCGAACTCGCTACTTCTTGGTTTTGTTAATTCGTGGAAATCTGACTTCGGGATCCAAATTTTCAAAGGCAGAAAGGAGGACTACGAGAAAAGTTTTGACTTTATATTCTCAACAAACTTGATGACGATGTTGACGAAACAAATTGATAAACTCCAGTTCTATGCTACTCCGAAGCAGAATTCGCATGTTGAGATGGCGGGAAAAGAATGGGTGGACTTCTATGCAACTCCGAAGCAAAATTCGCATGTTGAGATGGCGGGAAAAGAATGGGTGGACGTGACCCCCAGCTCTCCTAACTCTTATGAGTTCGGTTGTTCGATTTACAGCGCTTTAAAGGCCTGTCCTTCCAACAAGCTTTGTATAATGGAGGTTACAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 ko01130 map00520 map01100 map01130

Pfam Domains

Protein Families

PRC RimM UDPGP

Protein Analysis

693

Amino Acids

77.66

Weight (kDa)

6.2

Isoelectric Point (pI)

46.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RimM	PF01782	79 - 167	3.9e-18	RimM N-terminal domain
PRC	PF05239	174 - 268	4.9e-08	PRC-barrel domain
PRC_RimM	PF24986	181 - 267	1.2e-10	RimM PRC barrel domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009149)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46420
fragaria_vesca	FvH4_3g06410 FvH4_3g06410 FvH4_3g06410 FvH4_3g06410 FvH4_3g06410 FvH4_3g06410 FvH4_3g06410
malus_domestica	MD05G1291800.v1.1
prunus_persica	Prupe.4G073700_v2.0.a1
pyrus_communis	pycom05g26830
rosa_chinensis	RchiOBHm_Chr5g0012901
rosa_laevigata	RLG00000031967
rosa_multiflora	Rmu_co8505517.1_g000001 Rmu_sc0010496.1_g000008
rosa_roxburghii	Rroxscaffold_1G00063680
rosa_rugosa	Rorug05G0005100
rosa_samantha	Rh5AG099300 Rh5BG095900 Rh5CG108200 Rh5DG094600
rosa_wichuraiana	Rw5G008670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	99, 408, 1315
Acc16I	TGCGCA	1 cut(s)	149
AccB1I	GGYRCC	1 cut(s)	846
AccB7I	CCANNNNNTGG	1 cut(s)	1056
AciI	CCGC	8 cut(s)	157, 218, 313, 509, 615, 1596, 1895, 1955
AclWI	GGATC	3 cut(s)	1597, 1744, 1757
AcsI	RAATTY	9 cut(s)	299, 528, 811, 1003, 1116, 1291, 1755, 1876, 1936
AcuI	CTGAAG	2 cut(s)	213, 1313
AcyI	GRCGYC	1 cut(s)	847
AdeI	CACNNNGTG	1 cut(s)	718
AfaI	GTAC	4 cut(s)	245, 295, 1165, 1386
AfeI	AGCGCT	1 cut(s)	2026
AfiI	CCNNNNNNNGG	3 cut(s)	794, 1056, 1474
AflII	CTTAAG	1 cut(s)	566
AflIII	ACRYGT	2 cut(s)	931, 1690
AjiI	CACGTC	1 cut(s)	1975
AjnI	CCWGG	3 cut(s)	325, 406, 1684
AleI	CACNNNNGTG	1 cut(s)	1695
AluBI	AGCT	8 cut(s)	11, 385, 469, 482, 975, 1159, 1986, 2053
AluI	AGCT	8 cut(s)	11, 385, 469, 482, 975, 1159, 1986, 2053
Alw26I	GTCTC	5 cut(s)	193, 200, 337, 1136, 1301
AlwI	GGATC	3 cut(s)	1597, 1744, 1757
Aor51HI	AGCGCT	1 cut(s)	2026
AoxI	GGCC	5 cut(s)	459, 506, 1269, 1407, 2034
ApeKI	GCWGC	2 cut(s)	896, 1674
ApoI	RAATTY	9 cut(s)	299, 528, 811, 1003, 1116, 1291, 1755, 1876, 1936
Asp700I	GAANNNNTTC	4 cut(s)	369, 744, 1035, 1572
AspLEI	GCGC	4 cut(s)	150, 849, 888, 2027
AspS9I	GGNCC	3 cut(s)	831, 1259, 1408
AsuHPI	GGTGA	2 cut(s)	590, 704
AsuII	TTCGAA	1 cut(s)	1007
AvaII	GGWCC	2 cut(s)	831, 1259
BaeGI	GKGCMC	1 cut(s)	117
BamHI	GGATCC	1 cut(s)	1749
BanI	GGYRCC	1 cut(s)	846
BauI	CACGAG	1 cut(s)	1133
BbsI	GAAGAC	1 cut(s)	1131
BbvI	GCAGC	2 cut(s)	908, 1686
BccI	CCATC	8 cut(s)	330, 935, 1050, 1054, 1292, 1360, 1885, 1945
BceAI	ACGGC	1 cut(s)	231
BciT130I	CCWGG	3 cut(s)	327, 408, 1686
BciVI	GTATCC	2 cut(s)	417, 717
BclI	TGATCA	2 cut(s)	985, 1074
BcoDI	GTCTC	5 cut(s)	193, 200, 337, 1136, 1301
BfaI	CTAG	4 cut(s)	656, 1028, 1104, 1193
BfoI	RGCGCY	3 cut(s)	850, 889, 2028
BfrI	CTTAAG	1 cut(s)	566
BfuI	GTATCC	2 cut(s)	417, 717
BglII	AGATCT	1 cut(s)	1195
BisI	GCNGC	3 cut(s)	509, 897, 1675
BlsI	GCNGC	3 cut(s)	510, 898, 1676
BmcAI	AGTACT	1 cut(s)	295
Bme1390I	CCNGG	3 cut(s)	327, 408, 1686
Bme18I	GGWCC	2 cut(s)	831, 1259
BmgBI	CACGTC	1 cut(s)	1975
BmgT120I	GGNCC	3 cut(s)	831, 1259, 1408
BmiI	GGNNCC	2 cut(s)	848, 1751
BmrFI	CCNGG	3 cut(s)	327, 408, 1686
BmrI	ACTGGG	1 cut(s)	285
BmsI	GCATC	1 cut(s)	1422
BmuI	ACTGGG	1 cut(s)	285
BpiI	GAAGAC	1 cut(s)	1131
BpmI	CTGGAG	1 cut(s)	1835
Bpu14I	TTCGAA	1 cut(s)	1007
BpuEI	CTTGAG	1 cut(s)	219
BsaAI	YACGTR	1 cut(s)	1693
BsaHI	GRCGYC	1 cut(s)	847
BsaJI	CCNNGG	3 cut(s)	259, 406, 1562
BsaWI	WCCGGW	1 cut(s)	126
Bsc4I	CCNNNNNNNGG	3 cut(s)	794, 1056, 1474
Bse118I	RCCGGY	1 cut(s)	1582
Bse1I	ACTGG	6 cut(s)	291, 580, 679, 1272, 1505, 1852
Bse3DI	GCAATG	1 cut(s)	1221
BseBI	CCWGG	3 cut(s)	327, 408, 1686
BseDI	CCNNGG	3 cut(s)	259, 406, 1562
BseGI	GGATG	4 cut(s)	460, 558, 1046, 1437
BseLI	CCNNNNNNNGG	3 cut(s)	794, 1056, 1474
BseMI	GCAATG	1 cut(s)	1221
BseMII	CTCAG	6 cut(s)	123, 419, 1059, 1296, 1455, 1654
BseNI	ACTGG	6 cut(s)	291, 580, 679, 1272, 1505, 1852
BseRI	GAGGAG	1 cut(s)	162
BseSI	GKGCMC	1 cut(s)	117
BseXI	GCAGC	2 cut(s)	908, 1686
BseYI	CCCAGC	2 cut(s)	1159, 1982
BshFI	GGCC	5 cut(s)	461, 508, 1271, 1409, 2036
BshNI	GGYRCC	1 cut(s)	846
BsiSI	CCGG	3 cut(s)	44, 127, 1583
BslFI	GGGAC	3 cut(s)	87, 810, 1451
BslI	CCNNNNNNNGG	3 cut(s)	794, 1056, 1474
BsmAI	GTCTC	5 cut(s)	193, 200, 337, 1136, 1301
BsmFI	GGGAC	3 cut(s)	87, 810, 1451
BsnI	GGCC	5 cut(s)	461, 508, 1271, 1409, 2036
Bsp119I	TTCGAA	1 cut(s)	1007
Bsp1286I	GDGCHC	1 cut(s)	117
BspACI	CCGC	8 cut(s)	157, 218, 313, 509, 615, 1596, 1895, 1955
BspANI	GGCC	5 cut(s)	461, 508, 1271, 1409, 2036
BspCNI	CTCAG	6 cut(s)	122, 420, 1060, 1297, 1454, 1653
BspLI	GGNNCC	2 cut(s)	848, 1751
BspPI	GGATC	3 cut(s)	1597, 1744, 1757
BspQI	GCTCTTC	2 cut(s)	34, 54
BspT104I	TTCGAA	1 cut(s)	1007
BspT107I	GGYRCC	1 cut(s)	846
BspTI	CTTAAG	1 cut(s)	566
BsrDI	GCAATG	1 cut(s)	1221
BsrFI	RCCGGY	1 cut(s)	1582
BsrI	ACTGG	6 cut(s)	291, 580, 679, 1272, 1505, 1852
BssAI	RCCGGY	1 cut(s)	1582
BssECI	CCNNGG	3 cut(s)	259, 406, 1562
BssNI	GRCGYC	1 cut(s)	847
BssSI	CACGAG	1 cut(s)	1133
BssT1I	CCWWGG	1 cut(s)	1562
Bst2BI	CACGAG	1 cut(s)	1133
Bst2UI	CCWGG	3 cut(s)	327, 408, 1686
Bst4CI	ACNGT	4 cut(s)	187, 451, 912, 1417
Bst6I	CTCTTC	7 cut(s)	34, 54, 189, 391, 410, 1332, 1488
BstACI	GRCGYC	1 cut(s)	847
BstAFI	CTTAAG	1 cut(s)	566
BstBAI	YACGTR	1 cut(s)	1693
BstBI	TTCGAA	1 cut(s)	1007
BstC8I	GCNNGC	2 cut(s)	690, 1147
BstDEI	CTNAG	7 cut(s)	109, 428, 1068, 1305, 1441, 1486, 1640
BstDSI	CCRYGG	1 cut(s)	259
BstEII	GGTNACC	1 cut(s)	710
BstF5I	GGATG	4 cut(s)	460, 558, 1046, 1437
BstH2I	RGCGCY	3 cut(s)	850, 889, 2028
BstHHI	GCGC	4 cut(s)	150, 849, 888, 2027
BstMAI	GTCTC	5 cut(s)	193, 200, 337, 1136, 1301
BstMWI	GCNNNNNNNGC	5 cut(s)	156, 1088, 1879, 1939, 2033
BstNI	CCWGG	3 cut(s)	327, 408, 1686
BstNSI	RCATGY	3 cut(s)	935, 1886, 1946
BstPI	GGTNACC	1 cut(s)	710
BstSCI	CCNGG	3 cut(s)	325, 406, 1684
BstSLI	GKGCMC	1 cut(s)	117
BstV1I	GCAGC	2 cut(s)	908, 1686
BstV2I	GAAGAC	1 cut(s)	1131
BstX2I	RGATCY	3 cut(s)	1195, 1589, 1749
BstXI	CCANNNNNNTGG	1 cut(s)	1228
BstYI	RGATCY	3 cut(s)	1195, 1589, 1749
BsuI	GTATCC	2 cut(s)	417, 717
BsuRI	GGCC	5 cut(s)	461, 508, 1271, 1409, 2036
BtgI	CCRYGG	1 cut(s)	259
BtrI	CACGTC	1 cut(s)	1975
BtsCI	GGATG	4 cut(s)	460, 558, 1046, 1437
BtsIMutI	CAGTG	6 cut(s)	117, 183, 456, 1302, 1527, 1648
Cac8I	GCNNGC	2 cut(s)	690, 1147
CfoI	GCGC	4 cut(s)	150, 849, 888, 2027
Cfr10I	RCCGGY	1 cut(s)	1582
Cfr13I	GGNCC	3 cut(s)	831, 1259, 1408
Csp6I	GTAC	4 cut(s)	244, 294, 1164, 1385
CviAII	CATG	4 cut(s)	640, 932, 1883, 1943
CviQI	GTAC	4 cut(s)	244, 294, 1164, 1385
DdeI	CTNAG	7 cut(s)	109, 428, 1068, 1305, 1441, 1486, 1640
DinI	GGCGCC	1 cut(s)	848
DraI	TTTAAA	1 cut(s)	2031
DraIII	CACNNNGTG	1 cut(s)	718
DrdI	GACNNNNNNGTC	3 cut(s)	99, 408, 1315
DseDI	GACNNNNNNGTC	3 cut(s)	99, 408, 1315
Eam1104I	CTCTTC	7 cut(s)	34, 54, 189, 391, 410, 1332, 1488
EarI	CTCTTC	7 cut(s)	34, 54, 189, 391, 410, 1332, 1488
EciI	GGCGGA	2 cut(s)	233, 1611
Eco130I	CCWWGG	1 cut(s)	1562
Eco147I	AGGCCT	1 cut(s)	2036
Eco47I	GGWCC	2 cut(s)	831, 1259
Eco47III	AGCGCT	1 cut(s)	2026
Eco57I	CTGAAG	2 cut(s)	213, 1313
Eco91I	GGTNACC	1 cut(s)	710
EcoO65I	GGTNACC	1 cut(s)	710
EcoRI	GAATTC	1 cut(s)	1876
EcoRII	CCWGG	3 cut(s)	325, 406, 1684
EcoT14I	CCWWGG	1 cut(s)	1562
EcoT22I	ATGCAT	1 cut(s)	1437
EgeI	GGCGCC	1 cut(s)	848
EheI	GGCGCC	1 cut(s)	848
ErhI	CCWWGG	1 cut(s)	1562
FaeI	CATG	4 cut(s)	643, 935, 1886, 1946
FalI	AAGNNNNNCTT	6 cut(s)	549, 581, 785, 817, 1485, 1517
FaqI	GGGAC	3 cut(s)	87, 810, 1451
FatI	CATG	4 cut(s)	639, 931, 1882, 1942
FauI	CCCGC	2 cut(s)	1888, 1948
FbaI	TGATCA	2 cut(s)	985, 1074
Fnu4HI	GCNGC	3 cut(s)	509, 897, 1675
FokI	GGATG	4 cut(s)	467, 565, 1033, 1444
Fsp4HI	GCNGC	3 cut(s)	509, 897, 1675
FspBI	CTAG	4 cut(s)	656, 1028, 1104, 1193
FspI	TGCGCA	1 cut(s)	149
GlaI	GCGC	4 cut(s)	149, 848, 887, 2026
GluI	GCNGC	3 cut(s)	509, 897, 1675
GsaI	CCCAGC	2 cut(s)	1163, 1986
GsuI	CTGGAG	1 cut(s)	1835
HaeII	RGCGCY	3 cut(s)	850, 889, 2028
HaeIII	GGCC	5 cut(s)	461, 508, 1271, 1409, 2036
HapII	CCGG	3 cut(s)	44, 127, 1583
HhaI	GCGC	4 cut(s)	150, 849, 888, 2027
Hin1I	GRCGYC	1 cut(s)	847
Hin1II	CATG	4 cut(s)	643, 935, 1886, 1946
Hin6I	GCGC	4 cut(s)	148, 847, 886, 2025
HinP1I	GCGC	4 cut(s)	148, 847, 886, 2025
HincII	GTYRAC	1 cut(s)	1830
HindII	GTYRAC	1 cut(s)	1830
HindIII	AAGCTT	2 cut(s)	973, 2051
HinfI	GANTC	8 cut(s)	69, 107, 139, 228, 277, 668, 798, 1636
HpaII	CCGG	3 cut(s)	44, 127, 1583
HphI	GGTGA	2 cut(s)	590, 704
Hpy166II	GTNNAC	6 cut(s)	259, 581, 1166, 1830, 1912, 1972
Hpy188III	TCNNGA	9 cut(s)	104, 305, 374, 656, 1028, 1112, 1286, 1631, 1747
Hpy8I	GTNNAC	6 cut(s)	259, 581, 1166, 1830, 1912, 1972
Hpy99I	CGWCG	2 cut(s)	77, 217
HpyAV	CCTTC	3 cut(s)	515, 832, 2052
HpyCH4III	ACNGT	4 cut(s)	187, 451, 912, 1417
HpyCH4IV	ACGT	2 cut(s)	1692, 1974
HpyCH4V	TGCA	8 cut(s)	4, 778, 880, 1145, 1180, 1435, 1674, 1922
HpyF10VI	GCNNNNNNNGC	5 cut(s)	156, 1088, 1879, 1939, 2033
HpyF3I	CTNAG	7 cut(s)	109, 428, 1068, 1305, 1441, 1486, 1640
HpySE526I	ACGT	2 cut(s)	1692, 1974
Hsp92I	GRCGYC	1 cut(s)	847
Hsp92II	CATG	4 cut(s)	643, 935, 1886, 1946
HspAI	GCGC	4 cut(s)	148, 847, 886, 2025
KasI	GGCGCC	1 cut(s)	846
Ksp22I	TGATCA	2 cut(s)	985, 1074
LguI	GCTCTTC	2 cut(s)	34, 54
LmnI	GCTCC	3 cut(s)	82, 617, 922
Lsp1109I	GCAGC	2 cut(s)	908, 1686
LweI	GCATC	1 cut(s)	1422
MaeI	CTAG	4 cut(s)	656, 1028, 1104, 1193
MaeII	ACGT	2 cut(s)	1692, 1974
MaeIII	GTNAC	5 cut(s)	710, 1063, 1343, 1975, 2068
MfeI	CAATTG	1 cut(s)	1577
MflI	RGATCY	3 cut(s)	1195, 1589, 1749
MhlI	GDGCHC	1 cut(s)	117
Mly113I	GGCGCC	1 cut(s)	847
MlyI	GAGTC	4 cut(s)	63, 101, 133, 792
MmeI	TCCRAC	4 cut(s)	401, 495, 1567, 2070
Mph1103I	ATGCAT	1 cut(s)	1437
MroXI	GAANNNNTTC	4 cut(s)	369, 744, 1035, 1572
MseI	TTAA	7 cut(s)	567, 600, 947, 1086, 1427, 1725, 2030
MslI	CAYNNNNRTG	1 cut(s)	1695
MspA1I	CMGCKG	1 cut(s)	615
MspCI	CTTAAG	1 cut(s)	566
MspI	CCGG	3 cut(s)	44, 127, 1583
MspR9I	CCNGG	3 cut(s)	327, 408, 1686
MunI	CAATTG	1 cut(s)	1577
MvaI	CCWGG	3 cut(s)	327, 408, 1686
MwoI	GCNNNNNNNGC	5 cut(s)	156, 1088, 1879, 1939, 2033
NarI	GGCGCC	1 cut(s)	847
NlaIII	CATG	4 cut(s)	643, 935, 1886, 1946
NlaIV	GGNNCC	2 cut(s)	848, 1751
NmeAIII	GCCGAG	1 cut(s)	1385
NmuCI	GTSAC	3 cut(s)	710, 1343, 1975
NsbI	TGCGCA	1 cut(s)	149
NsiI	ATGCAT	1 cut(s)	1437
NspI	RCATGY	3 cut(s)	935, 1886, 1946
NspV	TTCGAA	1 cut(s)	1007
OliI	CACNNNNGTG	1 cut(s)	1695
PceI	AGGCCT	1 cut(s)	2036
PciI	ACATGT	1 cut(s)	931
PciSI	GCTCTTC	2 cut(s)	34, 54
PcsI	WCGNNNNNNNCGW	2 cut(s)	97, 1829
PdmI	GAANNNNTTC	4 cut(s)	369, 744, 1035, 1572
PfeI	GAWTC	4 cut(s)	228, 277, 668, 1636
PflMI	CCANNNNNTGG	1 cut(s)	1056
PfoI	TCCNGGA	1 cut(s)	1684
PkrI	GCNGC	3 cut(s)	510, 898, 1676
PleI	GAGTC	4 cut(s)	63, 101, 133, 792
PluTI	GGCGCC	1 cut(s)	850
PpsI	GAGTC	4 cut(s)	63, 101, 133, 792
Ppu21I	YACGTR	1 cut(s)	1693
PscI	ACATGT	1 cut(s)	931
Psp6I	CCWGG	3 cut(s)	325, 406, 1684
PspEI	GGTNACC	1 cut(s)	710
PspFI	CCCAGC	2 cut(s)	1159, 1982
PspGI	CCWGG	3 cut(s)	325, 406, 1684
PspN4I	GGNNCC	2 cut(s)	848, 1751
PspPI	GGNCC	3 cut(s)	831, 1259, 1408
PsrI	GAACNNNNNNTAC	4 cut(s)	798, 830, 1377, 1409
PsuI	RGATCY	3 cut(s)	1195, 1589, 1749
RsaI	GTAC	4 cut(s)	245, 295, 1165, 1386
RsaNI	GTAC	4 cut(s)	244, 294, 1164, 1385
RseI	CAYNNNNRTG	1 cut(s)	1695
SapI	GCTCTTC	2 cut(s)	34, 54
SaqAI	TTAA	7 cut(s)	567, 600, 947, 1086, 1427, 1725, 2030
SatI	GCNGC	3 cut(s)	509, 897, 1675
Sau96I	GGNCC	3 cut(s)	831, 1259, 1408
ScaI	AGTACT	1 cut(s)	295
SchI	GAGTC	4 cut(s)	63, 101, 133, 792
ScrFI	CCNGG	3 cut(s)	327, 408, 1686
SduI	GDGCHC	1 cut(s)	117
SfaNI	GCATC	1 cut(s)	1422
SfoI	GGCGCC	1 cut(s)	848
SfuI	TTCGAA	1 cut(s)	1007
SinI	GGWCC	2 cut(s)	831, 1259
SmiMI	CAYNNNNRTG	1 cut(s)	1695
SmlI	CTYRAG	2 cut(s)	234, 566
SmoI	CTYRAG	2 cut(s)	234, 566
SseBI	AGGCCT	1 cut(s)	2036
SsiI	CCGC	8 cut(s)	157, 218, 313, 509, 615, 1596, 1895, 1955
SspDI	GGCGCC	1 cut(s)	846
SspI	AATATT	1 cut(s)	1627
SspMI	CTAG	4 cut(s)	656, 1028, 1104, 1193
StuI	AGGCCT	1 cut(s)	2036
StyD4I	CCNGG	3 cut(s)	325, 406, 1684
StyI	CCWWGG	1 cut(s)	1562
TaaI	ACNGT	4 cut(s)	187, 451, 912, 1417
TaiI	ACGT	2 cut(s)	1695, 1977
TaqI	TCGA	9 cut(s)	91, 251, 645, 735, 756, 939, 1007, 1205, 2015
TatI	WGTACW	1 cut(s)	293
TauI	GCSGC	1 cut(s)	511
TfiI	GAWTC	4 cut(s)	228, 277, 668, 1636
Tru1I	TTAA	7 cut(s)	567, 600, 947, 1086, 1427, 1725, 2030
Tru9I	TTAA	7 cut(s)	567, 600, 947, 1086, 1427, 1725, 2030
TscAI	CASTG	6 cut(s)	117, 190, 456, 1309, 1527, 1648
TseFI	GTSAC	3 cut(s)	710, 1343, 1975
TseI	GCWGC	2 cut(s)	896, 1674
Tsp45I	GTSAC	3 cut(s)	710, 1343, 1975
TspDTI	ATGAA	5 cut(s)	569, 776, 1163, 1568, 1605
TspGWI	ACGGA	1 cut(s)	69
TspRI	CASTG	6 cut(s)	117, 190, 456, 1309, 1527, 1648
Van91I	CCANNNNNTGG	1 cut(s)	1056
Vha464I	CTTAAG	1 cut(s)	566
VpaK11BI	GGWCC	2 cut(s)	831, 1259
XapI	RAATTY	9 cut(s)	299, 528, 811, 1003, 1116, 1291, 1755, 1876, 1936
XbaI	TCTAGA	2 cut(s)	655, 1027
XceI	RCATGY	3 cut(s)	935, 1886, 1946
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1053
XmnI	GAANNNNTTC	4 cut(s)	369, 744, 1035, 1572
XspI	CTAG	4 cut(s)	656, 1028, 1104, 1193
ZrmI	AGTACT	1 cut(s)	295
Zsp2I	ATGCAT	1 cut(s)	1437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.