Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010470

Physical Location & Seq

Genomic Coordinates Forward (+)

5807642 .. 5813131

Gene Structure 5490 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g09980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGAGGACCCCGACGGAGTCCTCAACTTCGACTTCGAGGGCGGCCTCGACTCCGCCGCCGTCTCCGCGCCCACCCACACCGGCCTGGCCTCCAGCGCCCCGATCCAGTCCGACTCGTTCGCCTCCCAGCCCAAAAACCAGGCCGCCCCGGCGCCGCAGCCCGACCCAAATGTCAACCCGTCGGGGCGGAAGAGCTTCCGGCAAACGGTGTGTCGTCACTGGCTCCGGAGCCTCTGTATGAAAGGCGAGGCCTGCGGGTTCCTTCATCAATACGACAAGTCGCGGATGCCGGTGTGCCGGTTCTTCCGTATGTACGGCGAGTGTAGGGAGCAGGATTGCGTGTATAAGCATACCAACGAGGACATCAAGGAGTGTAATATGTACAAGTTAGGTTTTTGTCCAAATGGTCCTGATTGCCGGTATAGACATGCAAAGCTTCCTGGACCTCCACCCCCTGTGGAAGAAGTCCTTCAGAAGATCCAGCATTTGAATTCGTACAATTACAACAACTCAAATAAGTTCTCCCAACCACGGAATGGTGGTTTTCCCCAACAACATGATAGATCTCAGCCCGCACAAGTCACCAATTCATTCAATCAAGTGGTTGTAAGACCTTCAGCAGCAGAGTCTGCTAATGTCCAGCAGCCACAGCAATTTCAGCAAACCCAACAACCGGTTGCCCAGACTCAGGCACAAAGTGTTCCCAATGGCCTGGCTAGTCAGGCAAATAGAGCCGCACTGCCCTTGCCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAACCGTGAAAATTTGGAATTATCCGTACAACAAGGAGTTTGGGCAACTCAAAGGAGCAATGAATCCAAACTCAATGAAGCTTTCGACTCTGCAGAAAATGTCATATTAATTTTCTCAGTCAACCGGACTCGACATTTTCAGGGTTGTGCAAAGATGATGTCCAGAATTGGTGGGTCTGTTAGTGGAGGGAACTGGAAATATGCACATGGAACTGCACATTATGGCCGTAATTTCTCTGTCAAATGGTTAAAGCTATGTGAACTTTCCTTCCACAAAACTCGTCACTTGAGGAACCCATACAATGAGAACTTACCAGTGAAGATAAGTAGAGATTGTCAAGAGCTAGAGCCCTCCATCGGTGAGCAGTTGGCATCCTTGCTTTATCTTGAACCAGATAGTGAACTAATGGCAATCTCCATTGCAGCAGAGTCAAAACGAGAAGAAGAAAAAGCAAAGGGAGTCAATCCAGAGAATGGTGGTGAGAACCCAGACATTGTCCCATTTGAGGACAATGAAGAAGAGGAAGAGGAAGAAAGTGACGACGAGGAAGACTATCAAGTTCCTGGTGGAGCAATTGAGAACAGAGGAAGGGGTAGAGTCATGTGGCCCCCTCATATGCCACTAGGAGGAAGGGGTGGCAGACCTATGCCTGGGATGCAGGGGTTCCCTGGAATGATGGGTCCTGATGCAATGCCGTATGGACCAGTTACACCTGATGGATTTGTTATGCCCAATCCTTTTGGTATGGGCGGCCCTCGGGGTTTCAATCCATATGGTCCTAGGTTTTCCGGTGATTTTGGTGGGCCCAATCCTGGCATGATGTTTCGTGGGCGGCCTCCACAACCTGGTGGTATGTTTCCACCTGGTCCTTATGGGATGATGATGGGTCCTGGACGTGGACCATTTATGGGAGGGATGGGGGTTGGAGGTAATAATCCAGCCCGAGGTGGTCGTCCAGGTGGTATGCCACCAATGTTTCCCCCACACCCACCATCTCAAAACAATAACCGGTTGCAGAAGAGAGATCCAAGGGGATCGGGCAATGATCGGAATGAGAGGTATAGTGCAGGATCAGGTCATGGCAAAGAAATGCAGGCTGGTGGACCAGATGATGAGAACCATTATCAGCATTCATCAAAATCGTACCAGGAAGATTATGGTGCTGGGAACAATGGTAGGAATGATGACAGTGAAAGTGAAGACGAAGCACCGAGGCGGTCAAGGCATGGAGAGGGAAAGAAGAAACGGCGAGACTCGGAAGGAGATGCTACCTCTGAGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010363 GO:0010467 GO:0010468 GO:0010646 GO:0010941 GO:0010942 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0023051 GO:0031123 GO:0031124 GO:0031323 GO:0031347 GO:0031349 GO:0031440 GO:0031974 GO:0031981 GO:0032991 GO:0034052 GO:0034641 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050684 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1900363 GO:1901360 GO:1901363 GO:1903311 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

ko03015 ko05164 map03015 map05164

Pfam Domains

Protein Families

YTH

Protein Analysis

690

Amino Acids

75.93

Weight (kDa)

6.37

Isoelectric Point (pI)

56.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YTH	PF04146	254 - 388	9.6e-48	YT521-B-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30460 AT1G30460 AT1G30460
fragaria_vesca	FvH4_3g09980
malus_domestica	MD05G1274200.v1.1 MD10G1253900.v1.1
prunus_persica	Prupe.4G089500_v2.0.a1
pyrus_communis	pycom05g25560 pycom10g20950
rosa_chinensis	RchiOBHm_Chr5g0015731 RchiOBHm_Chr5g0015861
rosa_laevigata	RLG00000032226
rosa_multiflora	Rmu_sc0000012.1_g000002
rosa_roxburghii	Rroxscaffold_1G00060740
rosa_rugosa	Rorug05G0029600
rosa_samantha	Rh5AG123200 Rh5BG122100 Rh5CG132200 Rh5CG133300 Rh5DG121500
rosa_wichuraiana	Rw5G010630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	170
AccB1I	GGYRCC	1 cut(s)	151
AccB7I	CCANNNNNTGG	3 cut(s)	536, 1259, 1631
AccII	CGCG	2 cut(s)	68, 283
AccIII	TCCGGA	1 cut(s)	225
AclWI	GGATC	5 cut(s)	97, 472, 1805, 1828, 1864
AcoI	YGGCCR	1 cut(s)	1009
AcsI	RAATTY	2 cut(s)	490, 796
AcuI	CTGAAG	2 cut(s)	455, 600
AcyI	GRCGYC	1 cut(s)	152
AdeI	CACNNNGTG	1 cut(s)	698
AfaI	GTAC	5 cut(s)	314, 383, 497, 813, 1931
AgeI	ACCGGT	2 cut(s)	673, 1794
AgsI	TTSAA	4 cut(s)	490, 595, 1175, 1552
AjiI	CACGTC	1 cut(s)	1682
AloI	GAACNNNNNNTCC	2 cut(s)	1038, 1070
AluBI	AGCT	5 cut(s)	195, 436, 866, 1039, 1129
AluI	AGCT	5 cut(s)	195, 436, 866, 1039, 1129
Alw21I	GWGCWC	1 cut(s)	2067
Alw26I	GTCTC	2 cut(s)	67, 2031
AlwI	GGATC	5 cut(s)	97, 472, 1805, 1828, 1864
AlwNI	CAGNNNCTG	1 cut(s)	629
Ama87I	CYCGRG	2 cut(s)	1542, 1728
Aor13HI	TCCGGA	1 cut(s)	225
ApaI	GGGCCC	1 cut(s)	1593
ApeKI	GCWGC	4 cut(s)	157, 620, 643, 1208
ApoI	RAATTY	2 cut(s)	490, 796
ArsI	GACNNNNNNTTYG	4 cut(s)	196, 228, 929, 961
AseI	ATTAAT	1 cut(s)	893
AsiGI	ACCGGT	2 cut(s)	673, 1794
Asp700I	GAANNNNTTC	2 cut(s)	194, 468
AspA2I	CCTAGG	1 cut(s)	1565
AspLEI	GCGC	3 cut(s)	70, 98, 154
AsuC2I	CCSGG	1 cut(s)	149
AsuHPI	GGTGA	4 cut(s)	574, 1157, 1277, 1589
AvaI	CYCGRG	2 cut(s)	1542, 1728
AvrII	CCTAGG	1 cut(s)	1565
BaeGI	GKGCMC	1 cut(s)	1593
BanI	GGYRCC	1 cut(s)	151
BanII	GRGCYC	2 cut(s)	1137, 1593
BbsI	GAAGAC	2 cut(s)	1341, 1992
Bbv12I	GWGCWC	1 cut(s)	2067
BbvI	GCAGC	4 cut(s)	169, 632, 655, 1220
BccI	CCATC	6 cut(s)	1148, 1456, 1496, 1663, 1696, 1786
BceAI	ACGGC	5 cut(s)	44, 331, 996, 1465, 2048
BcnI	CCSGG	1 cut(s)	149
BcoDI	GTCTC	2 cut(s)	67, 2031
BfaI	CTAG	6 cut(s)	717, 762, 1130, 1409, 1566, 2068
BfmI	CTRYAG	1 cut(s)	876
BfoI	RGCGCY	2 cut(s)	99, 155
BglI	GCCNNNNNGGC	1 cut(s)	149
BglII	AGATCT	1 cut(s)	563
BlnI	CCTAGG	1 cut(s)	1565
BmeT110I	CYCGRG	2 cut(s)	1542, 1728
BmgBI	CACGTC	1 cut(s)	1682
BmsI	GCATC	5 cut(s)	276, 1166, 1431, 1462, 2041
BpiI	GAAGAC	2 cut(s)	1341, 1992
BpmI	CTGGAG	1 cut(s)	76
BpuEI	CTTGAG	2 cut(s)	735, 1093
BpuMI	CCSGG	1 cut(s)	149
BsaHI	GRCGYC	1 cut(s)	152
BsaJI	CCNNGG	9 cut(s)	147, 530, 1436, 1453, 1541, 1565, 1729, 1814, 1997
BsaWI	WCCGGW	5 cut(s)	225, 673, 909, 1574, 1794
BsaXI	ACNNNNNCTCC	2 cut(s)	220, 250
Bse118I	RCCGGY	6 cut(s)	80, 289, 297, 417, 673, 1794
Bse1I	ACTGG	5 cut(s)	106, 224, 983, 1100, 1490
Bse3DI	GCAATG	4 cut(s)	850, 1203, 1482, 1834
BseAI	TCCGGA	1 cut(s)	225
BseDI	CCNNGG	9 cut(s)	147, 530, 1436, 1453, 1541, 1565, 1729, 1814, 1997
BseGI	GGATG	5 cut(s)	291, 1157, 1446, 1668, 1707
BseMI	GCAATG	4 cut(s)	850, 1203, 1482, 1834
BseMII	CTCAG	4 cut(s)	581, 701, 915, 2052
BseNI	ACTGG	5 cut(s)	106, 224, 983, 1100, 1490
BseSI	GKGCMC	1 cut(s)	1593
BseXI	GCAGC	4 cut(s)	169, 632, 655, 1220
BseYI	CCCAGC	2 cut(s)	126, 1949
BsgI	GTGCAG	2 cut(s)	984, 1872
Bsh1236I	CGCG	2 cut(s)	68, 283
BshNI	GGYRCC	1 cut(s)	151
BshTI	ACCGGT	2 cut(s)	673, 1794
BsiHKAI	GWGCWC	1 cut(s)	2067
BsiHKCI	CYCGRG	2 cut(s)	1542, 1728
BslFI	GGGAC	1 cut(s)	1268
BsmAI	GTCTC	2 cut(s)	67, 2031
BsmBI	CGTCTC	1 cut(s)	67
BsmFI	GGGAC	1 cut(s)	1268
BsmI	GAATGC	1 cut(s)	1915
BsoBI	CYCGRG	2 cut(s)	1542, 1728
Bsp120I	GGGCCC	1 cut(s)	1589
Bsp1286I	GDGCHC	3 cut(s)	1137, 1593, 2067
Bsp13I	TCCGGA	1 cut(s)	225
Bsp1407I	TGTACA	1 cut(s)	381
Bsp143I	GATC	7 cut(s)	102, 477, 563, 1810, 1820, 1831, 1856
BspCNI	CTCAG	4 cut(s)	580, 700, 914, 2053
BspEI	TCCGGA	1 cut(s)	225
BspFNI	CGCG	2 cut(s)	68, 283
BspMAI	CTGCAG	1 cut(s)	880
BspPI	GGATC	5 cut(s)	97, 472, 1805, 1828, 1864
BspQI	GCTCTTC	1 cut(s)	185
BspT107I	GGYRCC	1 cut(s)	151
BsrDI	GCAATG	4 cut(s)	850, 1203, 1482, 1834
BsrFI	RCCGGY	6 cut(s)	80, 289, 297, 417, 673, 1794
BsrGI	TGTACA	1 cut(s)	381
BsrI	ACTGG	5 cut(s)	106, 224, 983, 1100, 1490
BssAI	RCCGGY	6 cut(s)	80, 289, 297, 417, 673, 1794
BssECI	CCNNGG	9 cut(s)	147, 530, 1436, 1453, 1541, 1565, 1729, 1814, 1997
BssMI	GATC	7 cut(s)	102, 477, 563, 1810, 1820, 1831, 1856
BssNI	GRCGYC	1 cut(s)	152
BssT1I	CCWWGG	2 cut(s)	1565, 1814
Bst4CI	ACNGT	3 cut(s)	208, 791, 1976
Bst6I	CTCTTC	4 cut(s)	185, 1299, 1305, 1799
BstACI	GRCGYC	1 cut(s)	152
BstAPI	GCANNNNNTGC	1 cut(s)	629
BstAUI	TGTACA	1 cut(s)	381
BstC8I	GCNNGC	3 cut(s)	253, 573, 1881
BstDEI	CTNAG	4 cut(s)	567, 687, 901, 2061
BstDSI	CCRYGG	1 cut(s)	530
BstF5I	GGATG	5 cut(s)	291, 1157, 1446, 1668, 1707
BstFNI	CGCG	2 cut(s)	68, 283
BstH2I	RGCGCY	2 cut(s)	99, 155
BstHHI	GCGC	3 cut(s)	70, 98, 154
BstKTI	GATC	7 cut(s)	105, 480, 566, 1813, 1823, 1834, 1859
BstMAI	GTCTC	2 cut(s)	67, 2031
BstMBI	GATC	7 cut(s)	102, 477, 563, 1810, 1820, 1831, 1856
BstNSI	RCATGY	1 cut(s)	431
BstSFI	CTRYAG	1 cut(s)	876
BstSLI	GKGCMC	1 cut(s)	1593
BstUI	CGCG	2 cut(s)	68, 283
BstV1I	GCAGC	4 cut(s)	169, 632, 655, 1220
BstV2I	GAAGAC	2 cut(s)	1341, 1992
BstX2I	RGATCY	3 cut(s)	477, 563, 1810
BstXI	CCANNNNNNTGG	1 cut(s)	712
BstYI	RGATCY	3 cut(s)	477, 563, 1810
BtgI	CCRYGG	1 cut(s)	530
BtrI	CACGTC	1 cut(s)	1682
BtsCI	GGATG	5 cut(s)	291, 1157, 1446, 1668, 1707
BtsI	GCAGTG	1 cut(s)	737
BtsIMutI	CAGTG	4 cut(s)	217, 737, 1107, 1981
Cac8I	GCNNGC	3 cut(s)	253, 573, 1881
CaiI	CAGNNNCTG	1 cut(s)	629
CfoI	GCGC	3 cut(s)	70, 98, 154
Cfr10I	RCCGGY	6 cut(s)	80, 289, 297, 417, 673, 1794
CsiI	ACCWGGT	2 cut(s)	1630, 1648
Csp6I	GTAC	5 cut(s)	313, 382, 496, 812, 1930
CspAI	ACCGGT	2 cut(s)	673, 1794
CviAII	CATG	7 cut(s)	428, 557, 992, 1387, 1603, 1865, 2012
CviQI	GTAC	5 cut(s)	313, 382, 496, 812, 1930
DdeI	CTNAG	4 cut(s)	567, 687, 901, 2061
DinI	GGCGCC	1 cut(s)	153
DpnI	GATC	7 cut(s)	104, 479, 565, 1812, 1822, 1833, 1858
DpnII	GATC	7 cut(s)	102, 477, 563, 1810, 1820, 1831, 1856
DraIII	CACNNNGTG	1 cut(s)	698
DrdI	GACNNNNNNGTC	1 cut(s)	170
DseDI	GACNNNNNNGTC	1 cut(s)	170
EaeI	YGGCCR	1 cut(s)	1009
Eam1104I	CTCTTC	4 cut(s)	185, 1299, 1305, 1799
EarI	CTCTTC	4 cut(s)	185, 1299, 1305, 1799
EciI	GGCGGA	2 cut(s)	43, 202
Eco130I	CCWWGG	2 cut(s)	1565, 1814
Eco147I	AGGCCT	1 cut(s)	251
Eco24I	GRGCYC	2 cut(s)	1137, 1593
Eco57I	CTGAAG	2 cut(s)	455, 600
Eco88I	CYCGRG	2 cut(s)	1542, 1728
EcoO109I	RGGNCCY	3 cut(s)	7, 1466, 1673
EcoRI	GAATTC	1 cut(s)	490
EcoT14I	CCWWGG	2 cut(s)	1565, 1814
EcoT38I	GRGCYC	2 cut(s)	1137, 1593
EgeI	GGCGCC	1 cut(s)	153
EheI	GGCGCC	1 cut(s)	153
ErhI	CCWWGG	2 cut(s)	1565, 1814
Esp3I	CGTCTC	1 cut(s)	67
FaeI	CATG	7 cut(s)	431, 560, 995, 1390, 1606, 1868, 2015
FalI	AAGNNNNNCTT	2 cut(s)	453, 485
FaqI	GGGAC	1 cut(s)	1268
FatI	CATG	7 cut(s)	427, 556, 991, 1386, 1602, 1864, 2011
FauI	CCCGC	2 cut(s)	248, 580
FauNDI	CATATG	2 cut(s)	1401, 1558
FokI	GGATG	5 cut(s)	298, 1144, 1453, 1675, 1714
FriOI	GRGCYC	2 cut(s)	1137, 1593
FspBI	CTAG	6 cut(s)	717, 762, 1130, 1409, 1566, 2068
GlaI	GCGC	3 cut(s)	69, 97, 153
GsaI	CCCAGC	2 cut(s)	130, 1953
GsuI	CTGGAG	1 cut(s)	76
HaeII	RGCGCY	2 cut(s)	99, 155
HhaI	GCGC	3 cut(s)	70, 98, 154
Hin1I	GRCGYC	1 cut(s)	152
Hin1II	CATG	7 cut(s)	431, 560, 995, 1390, 1606, 1868, 2015
Hin6I	GCGC	3 cut(s)	68, 96, 152
HinP1I	GCGC	3 cut(s)	68, 96, 152
HincII	GTYRAC	2 cut(s)	175, 907
HindII	GTYRAC	2 cut(s)	175, 907
HindIII	AAGCTT	2 cut(s)	434, 864
HphI	GGTGA	4 cut(s)	574, 1157, 1277, 1589
Hpy166II	GTNNAC	6 cut(s)	175, 907, 1046, 1187, 1685, 1889
Hpy188I	TCNGA	5 cut(s)	112, 474, 1836, 2044, 2062
Hpy188III	TCNNGA	7 cut(s)	226, 410, 948, 1124, 1172, 1253, 1469
Hpy8I	GTNNAC	6 cut(s)	175, 907, 1046, 1187, 1685, 1889
Hpy99I	CGWCG	3 cut(s)	17, 184, 1331
HpyAV	CCTTC	7 cut(s)	272, 479, 624, 1063, 1368, 1410, 2039
HpyCH4III	ACNGT	3 cut(s)	208, 791, 1976
HpyCH4IV	ACGT	1 cut(s)	1681
HpyF3I	CTNAG	4 cut(s)	567, 687, 901, 2061
HpySE526I	ACGT	1 cut(s)	1681
Hsp92I	GRCGYC	1 cut(s)	152
Hsp92II	CATG	7 cut(s)	431, 560, 995, 1390, 1606, 1868, 2015
HspAI	GCGC	3 cut(s)	68, 96, 152
KasI	GGCGCC	1 cut(s)	151
Kpn2I	TCCGGA	1 cut(s)	225
Kzo9I	GATC	7 cut(s)	102, 477, 563, 1810, 1820, 1831, 1856
LguI	GCTCTTC	1 cut(s)	185
LmnI	GCTCC	5 cut(s)	228, 228, 328, 840, 1355
Lsp1109I	GCAGC	4 cut(s)	169, 632, 655, 1220
LweI	GCATC	5 cut(s)	276, 1166, 1431, 1462, 2041
MabI	ACCWGGT	2 cut(s)	1630, 1648
MaeI	CTAG	6 cut(s)	717, 762, 1130, 1409, 1566, 2068
MaeII	ACGT	1 cut(s)	1681
MaeIII	GTNAC	5 cut(s)	215, 580, 1067, 1322, 1492
MalI	GATC	7 cut(s)	104, 479, 565, 1812, 1822, 1833, 1858
MboI	GATC	7 cut(s)	102, 477, 563, 1810, 1820, 1831, 1856
MfeI	CAATTG	1 cut(s)	1359
MflI	RGATCY	3 cut(s)	477, 563, 1810
MhlI	GDGCHC	3 cut(s)	1137, 1593, 2067
Mly113I	GGCGCC	1 cut(s)	152
MmeI	TCCRAC	2 cut(s)	135, 1690
MroI	TCCGGA	1 cut(s)	225
MroXI	GAANNNNTTC	2 cut(s)	194, 468
MseI	TTAA	3 cut(s)	777, 893, 1034
MunI	CAATTG	1 cut(s)	1359
Mva1269I	GAATGC	1 cut(s)	1915
MvnI	CGCG	2 cut(s)	68, 283
NarI	GGCGCC	1 cut(s)	152
NciI	CCSGG	1 cut(s)	149
NdeI	CATATG	2 cut(s)	1401, 1558
NdeII	GATC	7 cut(s)	102, 477, 563, 1810, 1820, 1831, 1856
NlaIII	CATG	7 cut(s)	431, 560, 995, 1390, 1606, 1868, 2015
NmuCI	GTSAC	4 cut(s)	215, 580, 1067, 1322
NspI	RCATGY	1 cut(s)	431
PceI	AGGCCT	1 cut(s)	251
PciSI	GCTCTTC	1 cut(s)	185
PctI	GAATGC	1 cut(s)	1915
PdmI	GAANNNNTTC	2 cut(s)	194, 468
PfeI	GAWTC	1 cut(s)	848
PflFI	GACNNNGTC	2 cut(s)	17, 1280
PflMI	CCANNNNNTGG	3 cut(s)	536, 1259, 1631
PfoI	TCCNGGA	2 cut(s)	439, 1675
PinAI	ACCGGT	2 cut(s)	673, 1794
PluTI	GGCGCC	1 cut(s)	155
PpuMI	RGGWCCY	3 cut(s)	7, 1466, 1673
PshBI	ATTAAT	1 cut(s)	893
Psp5II	RGGWCCY	3 cut(s)	7, 1466, 1673
PspFI	CCCAGC	2 cut(s)	126, 1949
PspOMI	GGGCCC	1 cut(s)	1589
PspPPI	RGGWCCY	3 cut(s)	7, 1466, 1673
PstI	CTGCAG	1 cut(s)	880
PstNI	CAGNNNCTG	1 cut(s)	629
PsuI	RGATCY	3 cut(s)	477, 563, 1810
PsyI	GACNNNGTC	2 cut(s)	17, 1280
RsaI	GTAC	5 cut(s)	314, 383, 497, 813, 1931
RsaNI	GTAC	5 cut(s)	313, 382, 496, 812, 1930
SapI	GCTCTTC	1 cut(s)	185
SaqAI	TTAA	3 cut(s)	777, 893, 1034
Sau3AI	GATC	7 cut(s)	102, 477, 563, 1810, 1820, 1831, 1856
SduI	GDGCHC	3 cut(s)	1137, 1593, 2067
SexAI	ACCWGGT	2 cut(s)	1630, 1648
SfaNI	GCATC	5 cut(s)	276, 1166, 1431, 1462, 2041
SfcI	CTRYAG	1 cut(s)	876
SfoI	GGCGCC	1 cut(s)	153
SmlI	CTYRAG	2 cut(s)	750, 1072
SmoI	CTYRAG	2 cut(s)	750, 1072
SseBI	AGGCCT	1 cut(s)	251
SspDI	GGCGCC	1 cut(s)	151
SspMI	CTAG	6 cut(s)	717, 762, 1130, 1409, 1566, 2068
StuI	AGGCCT	1 cut(s)	251
StyI	CCWWGG	2 cut(s)	1565, 1814
TaaI	ACNGT	3 cut(s)	208, 791, 1976
TaiI	ACGT	1 cut(s)	1684
TaqI	TCGA	5 cut(s)	30, 36, 48, 870, 916
TatI	WGTACW	1 cut(s)	381
TauI	GCSGC	7 cut(s)	45, 59, 146, 157, 737, 1539, 1621
TfiI	GAWTC	1 cut(s)	848
Tru1I	TTAA	3 cut(s)	777, 893, 1034
Tru9I	TTAA	3 cut(s)	777, 893, 1034
TscAI	CASTG	4 cut(s)	224, 744, 1107, 1981
TseFI	GTSAC	4 cut(s)	215, 580, 1067, 1322
TseI	GCWGC	4 cut(s)	157, 620, 643, 1208
Tsp45I	GTSAC	4 cut(s)	215, 580, 1067, 1322
TspDTI	ATGAA	7 cut(s)	254, 254, 579, 861, 876, 1314, 1908
TspGWI	ACGGA	4 cut(s)	30, 296, 547, 799
TspRI	CASTG	4 cut(s)	224, 744, 1107, 1981
Tth111I	GACNNNGTC	2 cut(s)	17, 1280
Van91I	CCANNNNNTGG	3 cut(s)	536, 1259, 1631
VspI	ATTAAT	1 cut(s)	893
XapI	RAATTY	2 cut(s)	490, 796
XceI	RCATGY	1 cut(s)	431
XcmI	CCANNNNNNNNNTGG	2 cut(s)	533, 1940
XmaJI	CCTAGG	1 cut(s)	1565
XmnI	GAANNNNTTC	2 cut(s)	194, 468
XspI	CTAG	6 cut(s)	717, 762, 1130, 1409, 1566, 2068

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.