Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0010470

Physical Location & Seq

Genomic Coordinates Forward (+)

4446879 .. 4452923

Gene Structure 6045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G089500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGAAGACTCAGACGGAGACATCAACTTCGACTTCGAGGGAGGCCTCGACGCCACCGCAGCCGCGGGCCCCACAAACCCGGGTCCACCATCTAATTCTCTGATGCAGTCCGACTCGGGCGTTGCGGCGGTGGACACCAACCCTGCCGCTGCGGCGCCACAACCCAACCACCCGAATCCGAACCGGTCGGGTGGGCGGAGCTACCGCCAAACGGTGTGCCGTCACTGGCTGCGTAGCCTTTGCATGAAGGGCGAGGCCTGTGGGTTCCTCCATCAATACGACAAGTCACGTATGCCTGTGTGTCGCTTCTTCAGGTTGTACGGCGAGTGCAGGGAGCAGGATTGCGTGTACAAGCACACCAACGAGGACATTAAAGAGTGTAATATGTACAAGTTGGGGTTTTGTCCAAATGGTCCTGATTGCCGGTATAGACATGCAAAGCTGCCTGGACCTCCACCTCCTGTGGAAGAAGTCCTTCAGAAGATTCAGCATTTGAATTCTTATAATTACAACACCTCAAATAAATTTTATCAACAACGGAATGCTGGCTTTCCCCAACAAGCCGATAAGTATCAGTCTGCACAAGGCCCCAATTCCGTCTATCAAGGTGTGGTGGGAAAACCTTCAACAGGAGAGTCTGCTAATGTCCACCAGCAGCAACAGGTTCAACAAACCCAACAACAGGTTGGCCACACGCAGACACAAAATCTACCCAATGGCCTAGCCAATCAGGCAAATAGAAGTGCGCCTTTGCCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAACCGTGAAAATTTGGAATTATCTGTACAACAAGGAGTGTGGGCAACTCAAAGGAGCAATGAGTCCAAACTTAATGAAGCTTTTGACTCTGCTGAAAATGTGATTTTAATTTTTTCAGTCAACCGGACTCGACATTTCCAGGGTTGTGCAAAGATGATGTCCAGAATTGGTGGGTCTGTTAGTGGAGGGAACTGGAAATATGCACATGGATCTGCGCATTATGGGAGAAATTTCTCTGTCAAATGGTTAAAGCTATGTGAACTGTCCTTTCACAAAACTCGTCATTTGAGGAACCCCTACAATGAGAACTTACCAGTAAAGATAAGTAGAGATTGTCAAGAGCTAGAGCCCTCCATCGGTGAGCAGTTGGCTTCCTTGCTTTATCTTGAGCCAGATAGTGAACTTATGGCAGTTTCGATTGCGGCAGAGTCAAAACGCGAAGAAGAAAAAGCAAAGGGAGTCAATCCGGAGAATGGTGGTGAGAACCCAGACATTGTCCCATTTGAGGACAATGAAGAGGAGGAAGAGGAAGAAAGTGACGATGAGGAAGAGAGCTTTGGTCCAGTTCCAGGGGTAGGAAATGAGGGCAGAGGAAGAGGCAGAGGAGGAATCATGTGGCCCCCTCACATGCCACTAGCAAGAGGTGGTAGACCTATGCCTGGGATGCAGGGTTTTCCCCCAGGAATGATGGGTGCTGATGCAATGCCCTATGGACCTGCACCTGACGGATTTGGTATGCCAAATCCTTTTGGTGTGGGCCCTCGTGGTTTCAATCCATATGGTCCCAGGTTTTCTGGTGATTTTACAGGGCCCACGCCTGGCATGATGTTTCGTGGGCGACCACAACAACCTGGATTTCCACCTGGTGGTTATGGGATGATGATGGGTCCTGGACGTGCACCATTTATGGGAGGTATGGGGGTTGGAGGTGCAAATCCAGGCCGGCCTGGTCGGCCAACTGGTATGTCTCCAATGTTTCCACCACCATCATCTCAAAACACTAACAGGATGCAGAAGAGAGATCCAAGGGGACCTTCCAATGATCGAAATGAGAGATATAGTGCTGGCTCAGGCCAGGGGAAGGGTCAAGAGATTCCAGGTTTAGCTGGTGGACCAGATGATGAGGCACGTTATCAGCAAGCATCAAAGGCTTACCGGGAAGATCAGTACGGTGCTGGTAACAACTCTAGAAATGATGATAGTGAAAGTGAGGATGAGGCACCGAGGCGGTCAAGGCATGGAGAGGGAAAGAAGAAAGGGAGAGGCTCAGAAGGAGATGTTACCTCAGAGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010363 GO:0010467 GO:0010468 GO:0010646 GO:0010941 GO:0010942 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0023051 GO:0031123 GO:0031124 GO:0031323 GO:0031347 GO:0031349 GO:0031440 GO:0031974 GO:0031981 GO:0032991 GO:0034052 GO:0034641 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050684 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1900363 GO:1901360 GO:1901363 GO:1903311 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

ko03015 ko05164 map03015 map05164

Pfam Domains

Protein Families

YTH

Protein Analysis

696

Amino Acids

76.03

Weight (kDa)

6.29

Isoelectric Point (pI)

50.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30460 AT1G30460 AT1G30460
fragaria_vesca	FvH4_3g09980
malus_domestica	MD05G1274200.v1.1 MD10G1253900.v1.1
prunus_persica	Prupe.4G089500_v2.0.a1
pyrus_communis	pycom05g25560 pycom10g20950
rosa_chinensis	RchiOBHm_Chr5g0015731 RchiOBHm_Chr5g0015861
rosa_laevigata	RLG00000032226
rosa_multiflora	Rmu_sc0000012.1_g000002
rosa_roxburghii	Rroxscaffold_1G00060740
rosa_rugosa	Rorug05G0029600
rosa_samantha	Rh5AG123200 Rh5BG122100 Rh5CG132200 Rh5CG133300 Rh5DG121500
rosa_wichuraiana	Rw5G010630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	504
Acc16I	TGCGCA	1 cut(s)	1008
Acc36I	ACCTGC	1 cut(s)	1516
AccB1I	GGYRCC	2 cut(s)	154, 2011
AccB7I	CCANNNNNTGG	1 cut(s)	1658
AccI	GTMKAC	1 cut(s)	1441
AccII	CGCG	2 cut(s)	65, 1230
AccIII	TCCGGA	1 cut(s)	1258
AclWI	GGATC	2 cut(s)	1009, 1808
AcoI	YGGCCR	2 cut(s)	688, 1745
AcsI	RAATTY	4 cut(s)	496, 524, 802, 1021
AcuI	CTGAAG	2 cut(s)	295, 461
AcyI	GRCGYC	2 cut(s)	51, 155
AdeI	CACNNNGTG	1 cut(s)	1658
AfaI	GTAC	5 cut(s)	320, 350, 389, 819, 1961
AgeI	ACCGGT	1 cut(s)	183
AgsI	TTSAA	4 cut(s)	496, 627, 668, 1564
AjiI	CACGTC	1 cut(s)	1688
AjuI	GAANNNNNNNTTGG	4 cut(s)	1332, 1364, 1810, 1842
AluBI	AGCT	7 cut(s)	201, 442, 872, 1045, 1135, 1347, 1898
AluI	AGCT	7 cut(s)	201, 442, 872, 1045, 1135, 1347, 1898
Alw21I	GWGCWC	2 cut(s)	1693, 2085
Alw26I	GTCTC	2 cut(s)	12, 1764
Alw44I	GTGCAC	1 cut(s)	1689
AlwI	GGATC	2 cut(s)	1009, 1808
Ama87I	CYCGRG	2 cut(s)	79, 115
Aor13HI	TCCGGA	1 cut(s)	1258
ApaI	GGGCCC	3 cut(s)	71, 1553, 1605
ApaLI	GTGCAC	1 cut(s)	1689
ApeKI	GCWGC	5 cut(s)	59, 149, 229, 442, 655
ApoI	RAATTY	4 cut(s)	496, 524, 802, 1021
ArsI	GACNNNNNNTTYG	4 cut(s)	11, 43, 935, 967
AsiGI	ACCGGT	1 cut(s)	183
Asp700I	GAANNNNTTC	2 cut(s)	474, 622
AspLEI	GCGC	3 cut(s)	157, 748, 1009
AsuC2I	CCSGG	3 cut(s)	80, 81, 1949
AsuHPI	GGTGA	3 cut(s)	1163, 1283, 1601
AvaI	CYCGRG	2 cut(s)	79, 115
AvaII	GGWCC	9 cut(s)	83, 413, 449, 1352, 1505, 1574, 1679, 1823, 1904
BaeGI	GKGCMC	4 cut(s)	71, 1553, 1605, 1693
BalI	TGGCCA	1 cut(s)	690
BanI	GGYRCC	2 cut(s)	154, 2011
BanII	GRGCYC	4 cut(s)	71, 1143, 1553, 1605
BauI	CACGAG	1 cut(s)	1554
BbsI	GAAGAC	1 cut(s)	12
Bbv12I	GWGCWC	2 cut(s)	1693, 2085
BbvI	GCAGC	5 cut(s)	71, 136, 216, 429, 667
BccI	CCATC	6 cut(s)	97, 279, 1154, 1474, 1669, 1786
BceAI	ACGGC	2 cut(s)	204, 337
BcnI	CCSGG	3 cut(s)	80, 81, 1949
BcoDI	GTCTC	2 cut(s)	12, 1764
BfaI	CTAG	6 cut(s)	722, 768, 1136, 1427, 1980, 2086
BfoI	RGCGCY	1 cut(s)	158
BfuAI	ACCTGC	1 cut(s)	1516
BglI	GCCNNNNNGGC	3 cut(s)	152, 731, 1744
Bme18I	GGWCC	9 cut(s)	83, 413, 449, 1352, 1505, 1574, 1679, 1823, 1904
BmeT110I	CYCGRG	2 cut(s)	79, 115
BmgBI	CACGTC	1 cut(s)	1688
BmsI	GCATC	5 cut(s)	93, 1446, 1480, 1791, 1943
BpiI	GAAGAC	1 cut(s)	12
Bpu10I	CCTNAGC	1 cut(s)	1861
BpuEI	CTTGAG	2 cut(s)	741, 1199
BpuMI	CCSGG	3 cut(s)	80, 81, 1949
BsaAI	YACGTR	1 cut(s)	290
BsaBI	GATNNNNATC	1 cut(s)	570
BsaHI	GRCGYC	2 cut(s)	51, 155
BsaWI	WCCGGW	3 cut(s)	183, 915, 1258
Bse118I	RCCGGY	3 cut(s)	183, 423, 1734
Bse1I	ACTGG	5 cut(s)	230, 989, 1106, 1355, 1756
Bse3DI	GCAATG	2 cut(s)	856, 1500
Bse8I	GATNNNNATC	1 cut(s)	570
BseAI	TCCGGA	1 cut(s)	1258
BseGI	GGATG	4 cut(s)	1461, 1674, 1806, 2011
BseJI	GATNNNNATC	1 cut(s)	570
BseMI	GCAATG	2 cut(s)	856, 1500
BseMII	CTCAG	3 cut(s)	24, 1875, 2073
BseNI	ACTGG	5 cut(s)	230, 989, 1106, 1355, 1756
BseRI	GAGGAG	2 cut(s)	1325, 1410
BseSI	GKGCMC	4 cut(s)	71, 1553, 1605, 1693
BseXI	GCAGC	5 cut(s)	71, 136, 216, 429, 667
BsgI	GTGCAG	3 cut(s)	349, 564, 1494
Bsh1236I	CGCG	2 cut(s)	65, 1230
Bsh1285I	CGRYCG	1 cut(s)	188
BshNI	GGYRCC	2 cut(s)	154, 2011
BshTI	ACCGGT	1 cut(s)	183
BsiEI	CGRYCG	1 cut(s)	188
BsiHKAI	GWGCWC	2 cut(s)	1693, 2085
BsiHKCI	CYCGRG	2 cut(s)	79, 115
BsiSI	CCGG	7 cut(s)	80, 184, 424, 916, 1259, 1735, 1948
BslFI	GGGAC	3 cut(s)	1274, 1560, 1836
BsmAI	GTCTC	2 cut(s)	12, 1764
BsmFI	GGGAC	3 cut(s)	1274, 1560, 1836
BsmI	GAATGC	1 cut(s)	547
BsoBI	CYCGRG	2 cut(s)	79, 115
Bsp120I	GGGCCC	3 cut(s)	67, 1549, 1601
Bsp1286I	GDGCHC	6 cut(s)	71, 1143, 1553, 1605, 1693, 2085
Bsp13I	TCCGGA	1 cut(s)	1258
Bsp1407I	TGTACA	3 cut(s)	348, 387, 817
Bsp143I	GATC	4 cut(s)	1001, 1813, 1834, 1954
BspCNI	CTCAG	3 cut(s)	23, 1874, 2072
BspEI	TCCGGA	1 cut(s)	1258
BspFNI	CGCG	2 cut(s)	65, 1230
BspMI	ACCTGC	1 cut(s)	1516
BspPI	GGATC	2 cut(s)	1009, 1808
BspT107I	GGYRCC	2 cut(s)	154, 2011
BsrDI	GCAATG	2 cut(s)	856, 1500
BsrFI	RCCGGY	3 cut(s)	183, 423, 1734
BsrGI	TGTACA	3 cut(s)	348, 387, 817
BsrI	ACTGG	5 cut(s)	230, 989, 1106, 1355, 1756
BssAI	RCCGGY	3 cut(s)	183, 423, 1734
BssMI	GATC	4 cut(s)	1001, 1813, 1834, 1954
BssNI	GRCGYC	2 cut(s)	51, 155
BssSI	CACGAG	1 cut(s)	1554
BssT1I	CCWWGG	1 cut(s)	1817
Bst2BI	CACGAG	1 cut(s)	1554
Bst4CI	ACNGT	4 cut(s)	214, 797, 1056, 1964
Bst6I	CTCTTC	5 cut(s)	1302, 1311, 1335, 1381, 1802
BstACI	GRCGYC	2 cut(s)	51, 155
BstAUI	TGTACA	3 cut(s)	348, 387, 817
BstBAI	YACGTR	1 cut(s)	290
BstC8I	GCNNGC	5 cut(s)	67, 547, 1736, 1858, 1932
BstDEI	CTNAG	4 cut(s)	10, 1861, 2059, 2077
BstDSI	CCRYGG	1 cut(s)	63
BstENI	CCTNNNNNAGG	1 cut(s)	627
BstF5I	GGATG	4 cut(s)	1461, 1674, 1806, 2011
BstFNI	CGCG	2 cut(s)	65, 1230
BstH2I	RGCGCY	1 cut(s)	158
BstHHI	GCGC	3 cut(s)	157, 748, 1009
BstKTI	GATC	4 cut(s)	1004, 1816, 1837, 1957
BstMAI	GTCTC	2 cut(s)	12, 1764
BstMBI	GATC	4 cut(s)	1001, 1813, 1834, 1954
BstMCI	CGRYCG	1 cut(s)	188
BstMWI	GCNNNNNNNGC	8 cut(s)	59, 152, 249, 731, 1456, 1744, 1940, 2026
BstNSI	RCATGY	2 cut(s)	437, 1423
BstSLI	GKGCMC	4 cut(s)	71, 1553, 1605, 1693
BstUI	CGCG	2 cut(s)	65, 1230
BstV1I	GCAGC	5 cut(s)	71, 136, 216, 429, 667
BstV2I	GAAGAC	1 cut(s)	12
BstX2I	RGATCY	2 cut(s)	1001, 1813
BstYI	RGATCY	2 cut(s)	1001, 1813
BtgI	CCRYGG	1 cut(s)	63
BtrI	CACGTC	1 cut(s)	1688
BtsCI	GGATG	4 cut(s)	1461, 1674, 1806, 2011
BtsIMutI	CAGTG	1 cut(s)	223
BveI	ACCTGC	1 cut(s)	1516
Cac8I	GCNNGC	5 cut(s)	67, 547, 1736, 1858, 1932
CfoI	GCGC	3 cut(s)	157, 748, 1009
Cfr10I	RCCGGY	3 cut(s)	183, 423, 1734
Cfr42I	CCGCGG	1 cut(s)	66
Cfr9I	CCCGGG	1 cut(s)	79
CseI	GACGC	1 cut(s)	59
CsiI	ACCWGGT	1 cut(s)	1654
Csp6I	GTAC	5 cut(s)	319, 349, 388, 818, 1960
CspAI	ACCGGT	1 cut(s)	183
CspCI	CAANNNNNGTGG	2 cut(s)	812, 847
CviAII	CATG	7 cut(s)	244, 434, 998, 1405, 1420, 1615, 2030
CviQI	GTAC	5 cut(s)	319, 349, 388, 818, 1960
DdeI	CTNAG	4 cut(s)	10, 1861, 2059, 2077
DinI	GGCGCC	1 cut(s)	156
DpnI	GATC	4 cut(s)	1003, 1815, 1836, 1956
DpnII	GATC	4 cut(s)	1001, 1813, 1834, 1954
DraIII	CACNNNGTG	1 cut(s)	1658
EaeI	YGGCCR	2 cut(s)	688, 1745
Eam1104I	CTCTTC	5 cut(s)	1302, 1311, 1335, 1381, 1802
EarI	CTCTTC	5 cut(s)	1302, 1311, 1335, 1381, 1802
EciI	GGCGGA	1 cut(s)	211
Eco130I	CCWWGG	1 cut(s)	1817
Eco147I	AGGCCT	2 cut(s)	45, 257
Eco24I	GRGCYC	4 cut(s)	71, 1143, 1553, 1605
Eco47I	GGWCC	9 cut(s)	83, 413, 449, 1352, 1505, 1574, 1679, 1823, 1904
Eco57I	CTGAAG	2 cut(s)	295, 461
Eco88I	CYCGRG	2 cut(s)	79, 115
EcoNI	CCTNNNNNAGG	1 cut(s)	627
EcoO109I	RGGNCCY	6 cut(s)	68, 587, 1550, 1601, 1679, 1823
EcoRI	GAATTC	1 cut(s)	496
EcoT14I	CCWWGG	1 cut(s)	1817
EcoT38I	GRGCYC	4 cut(s)	71, 1143, 1553, 1605
EgeI	GGCGCC	1 cut(s)	156
EheI	GGCGCC	1 cut(s)	156
ErhI	CCWWGG	1 cut(s)	1817
FaeI	CATG	7 cut(s)	247, 437, 1001, 1408, 1423, 1618, 2033
FalI	AAGNNNNNCTT	6 cut(s)	459, 491, 733, 765, 1810, 1842
FaqI	GGGAC	3 cut(s)	1274, 1560, 1836
FatI	CATG	7 cut(s)	243, 433, 997, 1404, 1419, 1614, 2029
FauI	CCCGC	1 cut(s)	58
FauNDI	CATATG	1 cut(s)	1570
FblI	GTMKAC	1 cut(s)	1441
FokI	GGATG	4 cut(s)	1468, 1681, 1813, 2018
FriOI	GRGCYC	4 cut(s)	71, 1143, 1553, 1605
FseI	GGCCGGCC	1 cut(s)	1738
FspBI	CTAG	6 cut(s)	722, 768, 1136, 1427, 1980, 2086
FspI	TGCGCA	1 cut(s)	1008
GlaI	GCGC	3 cut(s)	156, 747, 1008
HaeII	RGCGCY	1 cut(s)	158
HapII	CCGG	7 cut(s)	80, 184, 424, 916, 1259, 1735, 1948
HgaI	GACGC	1 cut(s)	59
HhaI	GCGC	3 cut(s)	157, 748, 1009
Hin1I	GRCGYC	2 cut(s)	51, 155
Hin1II	CATG	7 cut(s)	247, 437, 1001, 1408, 1423, 1618, 2033
Hin6I	GCGC	3 cut(s)	155, 746, 1007
HinP1I	GCGC	3 cut(s)	155, 746, 1007
HincII	GTYRAC	1 cut(s)	913
HindII	GTYRAC	1 cut(s)	913
HindIII	AAGCTT	1 cut(s)	870
HpaII	CCGG	7 cut(s)	80, 184, 424, 916, 1259, 1735, 1948
HphI	GGTGA	3 cut(s)	1163, 1283, 1601
Hpy188I	TCNGA	7 cut(s)	13, 102, 112, 180, 480, 2062, 2080
Hpy188III	TCNNGA	7 cut(s)	416, 954, 1130, 1178, 1259, 1880, 1980
Hpy99I	CGWCG	1 cut(s)	53
HpyAV	CCTTC	6 cut(s)	241, 485, 633, 1836, 1867, 2057
HpyCH4III	ACNGT	4 cut(s)	214, 797, 1056, 1964
HpyCH4IV	ACGT	3 cut(s)	289, 1687, 1921
HpyF10VI	GCNNNNNNNGC	8 cut(s)	59, 152, 249, 731, 1456, 1744, 1940, 2026
HpyF3I	CTNAG	4 cut(s)	10, 1861, 2059, 2077
HpySE526I	ACGT	3 cut(s)	289, 1687, 1921
Hsp92I	GRCGYC	2 cut(s)	51, 155
Hsp92II	CATG	7 cut(s)	247, 437, 1001, 1408, 1423, 1618, 2033
HspAI	GCGC	3 cut(s)	155, 746, 1007
KasI	GGCGCC	1 cut(s)	154
Kpn2I	TCCGGA	1 cut(s)	1258
KroI	GCCGGC	1 cut(s)	1734
KroNI	GCCGGC	1 cut(s)	1736
KspI	CCGCGG	1 cut(s)	66
Kzo9I	GATC	4 cut(s)	1001, 1813, 1834, 1954
LmnI	GCTCC	3 cut(s)	198, 334, 846
Lsp1109I	GCAGC	5 cut(s)	71, 136, 216, 429, 667
LweI	GCATC	5 cut(s)	93, 1446, 1480, 1791, 1943
MabI	ACCWGGT	1 cut(s)	1654
MaeI	CTAG	6 cut(s)	722, 768, 1136, 1427, 1980, 2086
MaeII	ACGT	3 cut(s)	289, 1687, 1921
MaeIII	GTNAC	5 cut(s)	221, 285, 1328, 1970, 2071
MalI	GATC	4 cut(s)	1003, 1815, 1836, 1956
MboI	GATC	4 cut(s)	1001, 1813, 1834, 1954
MflI	RGATCY	2 cut(s)	1001, 1813
MhlI	GDGCHC	6 cut(s)	71, 1143, 1553, 1605, 1693, 2085
MlsI	TGGCCA	1 cut(s)	690
MluNI	TGGCCA	1 cut(s)	690
Mly113I	GGCGCC	1 cut(s)	155
MlyI	GAGTC	8 cut(s)	2, 107, 644, 863, 872, 913, 1229, 1260
MmeI	TCCRAC	2 cut(s)	135, 1696
Mox20I	TGGCCA	1 cut(s)	690
MroI	TCCGGA	1 cut(s)	1258
MroNI	GCCGGC	1 cut(s)	1734
MroXI	GAANNNNTTC	2 cut(s)	474, 622
MscI	TGGCCA	1 cut(s)	690
MseI	TTAA	5 cut(s)	372, 783, 864, 899, 1040
Msp20I	TGGCCA	1 cut(s)	690
MspA1I	CMGCKG	2 cut(s)	65, 149
MspI	CCGG	7 cut(s)	80, 184, 424, 916, 1259, 1735, 1948
Mva1269I	GAATGC	1 cut(s)	547
MvnI	CGCG	2 cut(s)	65, 1230
MwoI	GCNNNNNNNGC	8 cut(s)	59, 152, 249, 731, 1456, 1744, 1940, 2026
NaeI	GCCGGC	1 cut(s)	1736
NarI	GGCGCC	1 cut(s)	155
NciI	CCSGG	3 cut(s)	80, 81, 1949
NdeI	CATATG	1 cut(s)	1570
NdeII	GATC	4 cut(s)	1001, 1813, 1834, 1954
NgoMIV	GCCGGC	1 cut(s)	1734
NlaIII	CATG	7 cut(s)	247, 437, 1001, 1408, 1423, 1618, 2033
NmuCI	GTSAC	3 cut(s)	221, 285, 1328
NsbI	TGCGCA	1 cut(s)	1008
NspI	RCATGY	2 cut(s)	437, 1423
PceI	AGGCCT	2 cut(s)	45, 257
PctI	GAATGC	1 cut(s)	547
PdiI	GCCGGC	1 cut(s)	1736
PdmI	GAANNNNTTC	2 cut(s)	474, 622
PfeI	GAWTC	4 cut(s)	175, 484, 1401, 1885
PflFI	GACNNNGTC	1 cut(s)	1286
PflMI	CCANNNNNTGG	1 cut(s)	1658
PfoI	TCCNGGA	1 cut(s)	1681
PinAI	ACCGGT	1 cut(s)	183
PleI	GAGTC	8 cut(s)	2, 107, 643, 862, 872, 913, 1228, 1259
PluTI	GGCGCC	1 cut(s)	158
PpsI	GAGTC	8 cut(s)	2, 107, 643, 862, 872, 913, 1228, 1259
Ppu21I	YACGTR	1 cut(s)	290
PpuMI	RGGWCCY	2 cut(s)	1679, 1823
PsiI	TTATAA	1 cut(s)	504
Psp5II	RGGWCCY	2 cut(s)	1679, 1823
PspOMI	GGGCCC	3 cut(s)	67, 1549, 1601
PspPPI	RGGWCCY	2 cut(s)	1679, 1823
PsuI	RGATCY	2 cut(s)	1001, 1813
PsyI	GACNNNGTC	1 cut(s)	1286
RigI	GGCCGGCC	1 cut(s)	1738
RsaI	GTAC	5 cut(s)	320, 350, 389, 819, 1961
RsaNI	GTAC	5 cut(s)	319, 349, 388, 818, 1960
SacII	CCGCGG	1 cut(s)	66
SaqAI	TTAA	5 cut(s)	372, 783, 864, 899, 1040
Sau3AI	GATC	4 cut(s)	1001, 1813, 1834, 1954
SchI	GAGTC	8 cut(s)	2, 107, 644, 863, 872, 913, 1229, 1260
SduI	GDGCHC	6 cut(s)	71, 1143, 1553, 1605, 1693, 2085
SexAI	ACCWGGT	1 cut(s)	1654
SfaNI	GCATC	5 cut(s)	93, 1446, 1480, 1791, 1943
SfiI	GGCCNNNNNGGCC	1 cut(s)	1744
SfoI	GGCGCC	1 cut(s)	156
Sfr303I	CCGCGG	1 cut(s)	66
SgrBI	CCGCGG	1 cut(s)	66
SinI	GGWCC	9 cut(s)	83, 413, 449, 1352, 1505, 1574, 1679, 1823, 1904
SmaI	CCCGGG	1 cut(s)	81
SmlI	CTYRAG	2 cut(s)	756, 1178
SmoI	CTYRAG	2 cut(s)	756, 1178
SseBI	AGGCCT	2 cut(s)	45, 257
SspDI	GGCGCC	1 cut(s)	154
SspMI	CTAG	6 cut(s)	722, 768, 1136, 1427, 1980, 2086
StuI	AGGCCT	2 cut(s)	45, 257
StyI	CCWWGG	1 cut(s)	1817
TaaI	ACNGT	4 cut(s)	214, 797, 1056, 1964
TaiI	ACGT	3 cut(s)	292, 1690, 1924
TaqI	TCGA	6 cut(s)	30, 36, 48, 922, 1208, 1837
TatI	WGTACW	3 cut(s)	348, 387, 817
TauI	GCSGC	5 cut(s)	65, 128, 149, 155, 1217
TfiI	GAWTC	4 cut(s)	175, 484, 1401, 1885
Tru1I	TTAA	5 cut(s)	372, 783, 864, 899, 1040
Tru9I	TTAA	5 cut(s)	372, 783, 864, 899, 1040
TscAI	CASTG	1 cut(s)	230
TseFI	GTSAC	3 cut(s)	221, 285, 1328
TseI	GCWGC	5 cut(s)	59, 149, 229, 442, 655
Tsp45I	GTSAC	3 cut(s)	221, 285, 1328
TspDTI	ATGAA	3 cut(s)	260, 882, 1320
TspGWI	ACGGA	4 cut(s)	30, 553, 586, 1533
TspMI	CCCGGG	1 cut(s)	79
TspRI	CASTG	1 cut(s)	230
Tth111I	GACNNNGTC	1 cut(s)	1286
Van91I	CCANNNNNTGG	1 cut(s)	1658
VneI	GTGCAC	1 cut(s)	1689
VpaK11BI	GGWCC	9 cut(s)	83, 413, 449, 1352, 1505, 1574, 1679, 1823, 1904
XagI	CCTNNNNNAGG	1 cut(s)	627
XapI	RAATTY	4 cut(s)	496, 524, 802, 1021
XbaI	TCTAGA	1 cut(s)	1979
XceI	RCATGY	2 cut(s)	437, 1423
XcmI	CCANNNNNNNNNTGG	1 cut(s)	683
XmaI	CCCGGG	1 cut(s)	79
XmiI	GTMKAC	1 cut(s)	1441
XmnI	GAANNNNTTC	2 cut(s)	474, 622
XspI	CTAG	6 cut(s)	722, 768, 1136, 1427, 1980, 2086

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.