Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0010470

Physical Location & Seq

Genomic Coordinates Forward (+)

11139862 .. 11145522

Gene Structure 5661 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG133300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGGAAGGATTCTGTCATTGCAGGTACAAGCTAGGTTTTTGTCCAAATGGTCCTGATTGCCGGTATAGACATGCAAAGCTTCCTGGACCTCCACCCCCTGTGGAAGAAGTCCTTCAGAAGATTCAGCATTTGAATTCGTACAATTACAACAACTCGAATAAGTTTTTCCAACAACGGAATGGTGGTTTTCCCCAACAACCTGATAGATCTCAGCCCGCACAAGTCCCCAATTCATTCAATCAAGTGGTTATAAGACCTTCAGCAGCAGAGTCTGCTAATGTCCAGCAGCCTCAACAATTTCAGCAAACACAACAACAGGTTGGCCAGACTCAGGCACAGAGTATTCCCAATGGCCTGCCTAGTCAGGCAAATAGAGCTGCATTGCCCTTGCCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAACCGTGAAAATTTGGAATTATCCGTACAACAAGGAGTATGGGCAACTCAAAGGAGCAATGAATCCAAACTTAATGAAGCTTTCGACTCTGCAGAAAATGTCATTTTAATTTTCTCAGTCAACCGGACTCGACATTTCCAGGGTTGTGCAAAGATGATGTCCAGAATTGGTGGGTCTGTTAGTGGAGGGAACTGGAAATATGCACATGGAACTGCACATTATGGGCGTAATTTCTCTGTCAAATGGTTAAAGCTATGTGAATTGTCCTTTCACAAAACTCGTCACTTGAGGAACCCATACAATGAGAACTTACCAGTGAAGATAAGCAGAGATTGTCAAGAGCTAGAGCCCTCCATTGGTGAGCAGTTGGCATCCTTGCTTTATCTTGAGCCAGATAGTGAACTTATGGCAATCTCCATTGCAGCAGAGTCAAAACGAGAAGAAGAAAAGGCAAAGGGAGTCAATCCAGAGAATGGTGGCGAGAACCCAGACATTGTCCCATTTGAGGACAATGAAGAAGAGGAAGAGGAAGAAAGTGACGACGAGGAAGACTACCAAGTTCCTGGTGGAGCAAATGAGAACAGAGGAAGGGGCAGAGGTATGTGGCCCCCTCATATGCCACTAGGAGGAAGAGGTGGCAGACCTATGCCTGGGATGCAGGGTTTCCCCCCTGGAATGATGGGTCCAGATGCAATGCCATATGGACCGGTTACACCTGATGGATTTGTTATGCCAAATCCTTTTGGTATGGGCCCTCGGGGTTTCAATCCATATGGTCCTAGGTTTTCCGGTGATTTTAATGGGCCCAATTCTGGCATGATGTTTCGTGGGCGTCCTTCACAACCCGGTGGTATGTTTCCACCTGGTCCCTATGGGATGATGATGGGTCCTGGACGTGGACCATTTATGGGAGGGATGGGGGTTGGAGGTGCAAATCCAGCCCGAGGTGGTCGTCCAGGTGGTATGCCGCCAATGTTCCCCCCACACCCACCACCATCATCTCAAAACAATAACCGGTTGCAGAAGAGAGATCCAAGGGGAGCTGGCAATGATCGAAATGAGAGGTATAGTGCAGGATCAGGCCATGGCAAAGAGATGCAGGCCGGTGGACCAGATGATGAGACCCATTATCAGCAATCATCAAAATCGTACCAGGAAGATTATGGTGGTGGGAACAATGGTAGGAATGATGACAGTGAAAGTGAAGATGAGGCACCGAGGCGGTCAAGGCATGGGGAGGGAAAGAAGAAACGGCGAGACGCGGAAGGAGATGCTACCTCTGAGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010363 GO:0010467 GO:0010468 GO:0010646 GO:0010941 GO:0010942 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0023051 GO:0031123 GO:0031124 GO:0031323 GO:0031347 GO:0031349 GO:0031440 GO:0031974 GO:0031981 GO:0032991 GO:0034052 GO:0034641 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050684 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1900363 GO:1901360 GO:1901363 GO:1903311 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

ko03015 ko05164 map03015 map05164

Pfam Domains

Protein Families

YTH

Protein Analysis

572

Amino Acids

62.94

Weight (kDa)

6.43

Isoelectric Point (pI)

55.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YTH	PF04146	135 - 269	7e-48	YT521-B-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30460 AT1G30460 AT1G30460
fragaria_vesca	FvH4_3g09980
malus_domestica	MD05G1274200.v1.1 MD10G1253900.v1.1
prunus_persica	Prupe.4G089500_v2.0.a1
pyrus_communis	pycom05g25560 pycom10g20950
rosa_chinensis	RchiOBHm_Chr5g0015731 RchiOBHm_Chr5g0015861
rosa_laevigata	RLG00000032226
rosa_multiflora	Rmu_sc0000012.1_g000002
rosa_roxburghii	Rroxscaffold_1G00060740
rosa_rugosa	Rorug05G0029600
rosa_samantha	Rh5AG123200 Rh5BG122100 Rh5CG132200 Rh5CG133300 Rh5DG121500
rosa_wichuraiana	Rw5G010630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	251
Acc36I	ACCTGC	1 cut(s)	12
AccB1I	GGYRCC	1 cut(s)	1642
AccB7I	CCANNNNNTGG	1 cut(s)	902
AccII	CGCG	1 cut(s)	1691
AciI	CCGC	4 cut(s)	216, 1397, 1651, 1691
AclWI	GGATC	2 cut(s)	1454, 1513
AcoI	YGGCCR	1 cut(s)	322
AcsI	RAATTY	2 cut(s)	133, 439
AcuI	CTGAAG	2 cut(s)	98, 243
AcyI	GRCGYC	1 cut(s)	1261
AfaI	GTAC	4 cut(s)	26, 140, 456, 1580
AgeI	ACCGGT	2 cut(s)	1135, 1443
AgsI	TTSAA	3 cut(s)	133, 238, 1195
AjiI	CACGTC	1 cut(s)	1325
AjnI	CCWGG	9 cut(s)	82, 567, 991, 1078, 1099, 1291, 1318, 1384, 1581
AluBI	AGCT	7 cut(s)	31, 79, 377, 509, 682, 772, 1472
AluI	AGCT	7 cut(s)	31, 79, 377, 509, 682, 772, 1472
Alw21I	GWGCWC	1 cut(s)	1716
Alw26I	GTCTC	2 cut(s)	1544, 1680
AlwI	GGATC	2 cut(s)	1454, 1513
AlwNI	CAGNNNCTG	1 cut(s)	272
Ama87I	CYCGRG	2 cut(s)	1185, 1371
AoxI	GGCC	7 cut(s)	322, 352, 1034, 1180, 1232, 1510, 1530
ApaI	GGGCCC	2 cut(s)	1184, 1236
ApeKI	GCWGC	4 cut(s)	263, 286, 377, 851
ApoI	RAATTY	2 cut(s)	133, 439
ArsI	GACNNNNNNTTYG	2 cut(s)	572, 604
AsiGI	ACCGGT	2 cut(s)	1135, 1443
Asp700I	GAANNNNTTC	1 cut(s)	111
AspA2I	CCTAGG	1 cut(s)	1208
AsuC2I	CCSGG	1 cut(s)	1275
AsuHPI	GGTGA	2 cut(s)	800, 1232
AvaI	CYCGRG	2 cut(s)	1185, 1371
AvaII	GGWCC	9 cut(s)	50, 86, 1112, 1133, 1205, 1295, 1316, 1328, 1538
AvrII	CCTAGG	1 cut(s)	1208
BaeGI	GKGCMC	2 cut(s)	1184, 1236
BalI	TGGCCA	1 cut(s)	324
BanI	GGYRCC	1 cut(s)	1642
BanII	GRGCYC	3 cut(s)	780, 1184, 1236
BbsI	GAAGAC	1 cut(s)	984
Bbv12I	GWGCWC	1 cut(s)	1716
BbvI	GCAGC	4 cut(s)	275, 298, 364, 863
BccI	CCATC	5 cut(s)	1102, 1142, 1306, 1339, 1432
BceAI	ACGGC	1 cut(s)	1697
BciT130I	CCWGG	9 cut(s)	84, 569, 993, 1080, 1101, 1293, 1320, 1386, 1583
BcnI	CCSGG	1 cut(s)	1275
BcoDI	GTCTC	2 cut(s)	1544, 1680
BfaI	CTAG	7 cut(s)	32, 360, 405, 773, 1052, 1209, 1717
BfmI	CTRYAG	1 cut(s)	519
BfuAI	ACCTGC	1 cut(s)	12
BglII	AGATCT	1 cut(s)	206
BisI	GCNGC	5 cut(s)	264, 287, 378, 852, 1397
BlnI	CCTAGG	1 cut(s)	1208
BlsI	GCNGC	5 cut(s)	265, 288, 379, 853, 1398
Bme18I	GGWCC	9 cut(s)	50, 86, 1112, 1133, 1205, 1295, 1316, 1328, 1538
BmeT110I	CYCGRG	2 cut(s)	1185, 1371
BmgBI	CACGTC	1 cut(s)	1325
BmiI	GGNNCC	8 cut(s)	722, 1037, 1113, 1182, 1234, 1297, 1317, 1644
BmsI	GCATC	5 cut(s)	809, 1074, 1108, 1515, 1690
BpiI	GAAGAC	1 cut(s)	984
BpuEI	CTTGAG	3 cut(s)	378, 736, 836
BpuMI	CCSGG	1 cut(s)	1275
BsaHI	GRCGYC	1 cut(s)	1261
BsaI	GGTCTC	1 cut(s)	1544
BsaJI	CCNNGG	9 cut(s)	568, 1079, 1099, 1184, 1208, 1372, 1463, 1513, 1646
BsaWI	WCCGGW	4 cut(s)	552, 1135, 1217, 1443
Bse118I	RCCGGY	4 cut(s)	60, 1135, 1443, 1532
Bse1I	ACTGG	2 cut(s)	626, 743
Bse3DI	GCAATG	6 cut(s)	16, 380, 493, 846, 1128, 1483
BseBI	CCWGG	9 cut(s)	84, 569, 993, 1080, 1101, 1293, 1320, 1386, 1583
BseDI	CCNNGG	9 cut(s)	568, 1079, 1099, 1184, 1208, 1372, 1463, 1513, 1646
BseGI	GGATG	4 cut(s)	800, 1089, 1311, 1350
BseMI	GCAATG	6 cut(s)	16, 380, 493, 846, 1128, 1483
BseMII	CTCAG	4 cut(s)	224, 344, 558, 1701
BseNI	ACTGG	2 cut(s)	626, 743
BseSI	GKGCMC	2 cut(s)	1184, 1236
BseXI	GCAGC	4 cut(s)	275, 298, 364, 863
BsgI	GTGCAG	2 cut(s)	627, 1521
Bsh1236I	CGCG	1 cut(s)	1691
BshFI	GGCC	7 cut(s)	324, 354, 1036, 1182, 1234, 1512, 1532
BshNI	GGYRCC	1 cut(s)	1642
BshTI	ACCGGT	2 cut(s)	1135, 1443
BsiHKAI	GWGCWC	1 cut(s)	1716
BsiHKCI	CYCGRG	2 cut(s)	1185, 1371
BsiSI	CCGG	7 cut(s)	61, 553, 1136, 1218, 1275, 1444, 1533
BslFI	GGGAC	3 cut(s)	209, 911, 1281
BsmAI	GTCTC	2 cut(s)	1544, 1680
BsmBI	CGTCTC	1 cut(s)	1680
BsmFI	GGGAC	3 cut(s)	209, 911, 1281
BsnI	GGCC	7 cut(s)	324, 354, 1036, 1182, 1234, 1512, 1532
Bso31I	GGTCTC	1 cut(s)	1544
BsoBI	CYCGRG	2 cut(s)	1185, 1371
Bsp120I	GGGCCC	2 cut(s)	1180, 1232
Bsp1286I	GDGCHC	4 cut(s)	780, 1184, 1236, 1716
Bsp143I	GATC	4 cut(s)	206, 1459, 1480, 1505
Bsp19I	CCATGG	1 cut(s)	1513
BspACI	CCGC	4 cut(s)	216, 1397, 1651, 1691
BspANI	GGCC	7 cut(s)	324, 354, 1036, 1182, 1234, 1512, 1532
BspCNI	CTCAG	4 cut(s)	223, 343, 557, 1702
BspFNI	CGCG	1 cut(s)	1691
BspLI	GGNNCC	8 cut(s)	722, 1037, 1113, 1182, 1234, 1297, 1317, 1644
BspMAI	CTGCAG	1 cut(s)	523
BspMI	ACCTGC	1 cut(s)	12
BspPI	GGATC	2 cut(s)	1454, 1513
BspT107I	GGYRCC	1 cut(s)	1642
BspTNI	GGTCTC	1 cut(s)	1544
BsrDI	GCAATG	6 cut(s)	16, 380, 493, 846, 1128, 1483
BsrFI	RCCGGY	4 cut(s)	60, 1135, 1443, 1532
BsrI	ACTGG	2 cut(s)	626, 743
BssAI	RCCGGY	4 cut(s)	60, 1135, 1443, 1532
BssECI	CCNNGG	9 cut(s)	568, 1079, 1099, 1184, 1208, 1372, 1463, 1513, 1646
BssMI	GATC	4 cut(s)	206, 1459, 1480, 1505
BssNI	GRCGYC	1 cut(s)	1261
BssT1I	CCWWGG	3 cut(s)	1208, 1463, 1513
Bst2UI	CCWGG	9 cut(s)	84, 569, 993, 1080, 1101, 1293, 1320, 1386, 1583
Bst4CI	ACNGT	2 cut(s)	434, 1625
Bst6I	CTCTTC	4 cut(s)	942, 948, 1054, 1448
BstACI	GRCGYC	1 cut(s)	1261
BstAPI	GCANNNNNTGC	1 cut(s)	272
BstC8I	GCNNGC	4 cut(s)	216, 356, 1474, 1530
BstDEI	CTNAG	4 cut(s)	210, 330, 544, 1710
BstDSI	CCRYGG	1 cut(s)	1513
BstF5I	GGATG	4 cut(s)	800, 1089, 1311, 1350
BstFNI	CGCG	1 cut(s)	1691
BstKTI	GATC	4 cut(s)	209, 1462, 1483, 1508
BstMAI	GTCTC	2 cut(s)	1544, 1680
BstMBI	GATC	4 cut(s)	206, 1459, 1480, 1505
BstMWI	GCNNNNNNNGC	5 cut(s)	272, 374, 1084, 1367, 1657
BstNI	CCWGG	9 cut(s)	84, 569, 993, 1080, 1101, 1293, 1320, 1386, 1583
BstNSI	RCATGY	1 cut(s)	74
BstSFI	CTRYAG	1 cut(s)	519
BstSLI	GKGCMC	2 cut(s)	1184, 1236
BstUI	CGCG	1 cut(s)	1691
BstV1I	GCAGC	4 cut(s)	275, 298, 364, 863
BstV2I	GAAGAC	1 cut(s)	984
BstX2I	RGATCY	2 cut(s)	206, 1459
BstXI	CCANNNNNNTGG	1 cut(s)	992
BstYI	RGATCY	2 cut(s)	206, 1459
BsuRI	GGCC	7 cut(s)	324, 354, 1036, 1182, 1234, 1512, 1532
BtgI	CCRYGG	1 cut(s)	1513
BtrI	CACGTC	1 cut(s)	1325
BtsCI	GGATG	4 cut(s)	800, 1089, 1311, 1350
BtsIMutI	CAGTG	2 cut(s)	750, 1630
BveI	ACCTGC	1 cut(s)	12
Cac8I	GCNNGC	4 cut(s)	216, 356, 1474, 1530
CaiI	CAGNNNCTG	1 cut(s)	272
Cfr10I	RCCGGY	4 cut(s)	60, 1135, 1443, 1532
CseI	GACGC	2 cut(s)	1250, 1697
CsiI	ACCWGGT	1 cut(s)	1291
Csp6I	GTAC	4 cut(s)	25, 139, 455, 1579
CspAI	ACCGGT	2 cut(s)	1135, 1443
CviAII	CATG	5 cut(s)	71, 635, 1246, 1514, 1661
CviQI	GTAC	4 cut(s)	25, 139, 455, 1579
DdeI	CTNAG	4 cut(s)	210, 330, 544, 1710
DpnI	GATC	4 cut(s)	208, 1461, 1482, 1507
DpnII	GATC	4 cut(s)	206, 1459, 1480, 1505
EaeI	YGGCCR	1 cut(s)	322
Eam1104I	CTCTTC	4 cut(s)	942, 948, 1054, 1448
EarI	CTCTTC	4 cut(s)	942, 948, 1054, 1448
Eco130I	CCWWGG	3 cut(s)	1208, 1463, 1513
Eco24I	GRGCYC	3 cut(s)	780, 1184, 1236
Eco31I	GGTCTC	1 cut(s)	1544
Eco47I	GGWCC	9 cut(s)	50, 86, 1112, 1133, 1205, 1295, 1316, 1328, 1538
Eco57I	CTGAAG	2 cut(s)	98, 243
Eco88I	CYCGRG	2 cut(s)	1185, 1371
EcoO109I	RGGNCCY	2 cut(s)	1181, 1316
EcoRI	GAATTC	1 cut(s)	133
EcoRII	CCWGG	9 cut(s)	82, 567, 991, 1078, 1099, 1291, 1318, 1384, 1581
EcoT14I	CCWWGG	3 cut(s)	1208, 1463, 1513
EcoT38I	GRGCYC	3 cut(s)	780, 1184, 1236
ErhI	CCWWGG	3 cut(s)	1208, 1463, 1513
Esp3I	CGTCTC	1 cut(s)	1680
FaeI	CATG	5 cut(s)	74, 638, 1249, 1517, 1664
FalI	AAGNNNNNCTT	2 cut(s)	96, 128
FaqI	GGGAC	3 cut(s)	209, 911, 1281
FatI	CATG	5 cut(s)	70, 634, 1245, 1513, 1660
FauI	CCCGC	1 cut(s)	223
FauNDI	CATATG	3 cut(s)	1044, 1129, 1201
Fnu4HI	GCNGC	5 cut(s)	264, 287, 378, 852, 1397
FokI	GGATG	4 cut(s)	787, 1096, 1318, 1357
FriOI	GRGCYC	3 cut(s)	780, 1184, 1236
Fsp4HI	GCNGC	5 cut(s)	264, 287, 378, 852, 1397
FspBI	CTAG	7 cut(s)	32, 360, 405, 773, 1052, 1209, 1717
GluI	GCNGC	5 cut(s)	264, 287, 378, 852, 1397
HaeIII	GGCC	7 cut(s)	324, 354, 1036, 1182, 1234, 1512, 1532
HapII	CCGG	7 cut(s)	61, 553, 1136, 1218, 1275, 1444, 1533
HgaI	GACGC	2 cut(s)	1250, 1697
Hin1I	GRCGYC	1 cut(s)	1261
Hin1II	CATG	5 cut(s)	74, 638, 1249, 1517, 1664
HincII	GTYRAC	1 cut(s)	550
HindII	GTYRAC	1 cut(s)	550
HindIII	AAGCTT	2 cut(s)	77, 507
HinfI	GANTC	9 cut(s)	9, 121, 269, 328, 491, 515, 556, 857, 888
HpaII	CCGG	7 cut(s)	61, 553, 1136, 1218, 1275, 1444, 1533
HphI	GGTGA	2 cut(s)	800, 1232
Hpy166II	GTNNAC	4 cut(s)	550, 830, 1328, 1538
Hpy188I	TCNGA	2 cut(s)	117, 1711
Hpy188III	TCNNGA	6 cut(s)	53, 591, 767, 815, 896, 1115
Hpy8I	GTNNAC	4 cut(s)	550, 830, 1328, 1538
Hpy99I	CGWCG	1 cut(s)	974
HpyAV	CCTTC	5 cut(s)	122, 267, 1011, 1275, 1688
HpyCH4III	ACNGT	2 cut(s)	434, 1625
HpyCH4IV	ACGT	1 cut(s)	1324
HpyF10VI	GCNNNNNNNGC	5 cut(s)	272, 374, 1084, 1367, 1657
HpyF3I	CTNAG	4 cut(s)	210, 330, 544, 1710
HpySE526I	ACGT	1 cut(s)	1324
Hsp92I	GRCGYC	1 cut(s)	1261
Hsp92II	CATG	5 cut(s)	74, 638, 1249, 1517, 1664
Kzo9I	GATC	4 cut(s)	206, 1459, 1480, 1505
LmnI	GCTCC	3 cut(s)	483, 998, 1469
Lsp1109I	GCAGC	4 cut(s)	275, 298, 364, 863
LweI	GCATC	5 cut(s)	809, 1074, 1108, 1515, 1690
MabI	ACCWGGT	1 cut(s)	1291
MaeI	CTAG	7 cut(s)	32, 360, 405, 773, 1052, 1209, 1717
MaeII	ACGT	1 cut(s)	1324
MaeIII	GTNAC	3 cut(s)	710, 965, 1138
MalI	GATC	4 cut(s)	208, 1461, 1482, 1507
MboI	GATC	4 cut(s)	206, 1459, 1480, 1505
MflI	RGATCY	2 cut(s)	206, 1459
MhlI	GDGCHC	4 cut(s)	780, 1184, 1236, 1716
MlsI	TGGCCA	1 cut(s)	324
MluNI	TGGCCA	1 cut(s)	324
MlyI	GAGTC	6 cut(s)	278, 322, 509, 550, 866, 897
MmeI	TCCRAC	2 cut(s)	193, 1333
Mox20I	TGGCCA	1 cut(s)	324
MroXI	GAANNNNTTC	1 cut(s)	111
MscI	TGGCCA	1 cut(s)	324
MseI	TTAA	5 cut(s)	420, 501, 536, 677, 1227
Msp20I	TGGCCA	1 cut(s)	324
MspI	CCGG	7 cut(s)	61, 553, 1136, 1218, 1275, 1444, 1533
MvaI	CCWGG	9 cut(s)	84, 569, 993, 1080, 1101, 1293, 1320, 1386, 1583
MvnI	CGCG	1 cut(s)	1691
MwoI	GCNNNNNNNGC	5 cut(s)	272, 374, 1084, 1367, 1657
NciI	CCSGG	1 cut(s)	1275
NcoI	CCATGG	1 cut(s)	1513
NdeI	CATATG	3 cut(s)	1044, 1129, 1201
NdeII	GATC	4 cut(s)	206, 1459, 1480, 1505
NlaIII	CATG	5 cut(s)	74, 638, 1249, 1517, 1664
NlaIV	GGNNCC	8 cut(s)	722, 1037, 1113, 1182, 1234, 1297, 1317, 1644
NmuCI	GTSAC	2 cut(s)	710, 965
NspI	RCATGY	1 cut(s)	74
PdmI	GAANNNNTTC	1 cut(s)	111
PfeI	GAWTC	3 cut(s)	9, 121, 491
PflFI	GACNNNGTC	1 cut(s)	923
PflMI	CCANNNNNTGG	1 cut(s)	902
PfoI	TCCNGGA	2 cut(s)	82, 1318
PinAI	ACCGGT	2 cut(s)	1135, 1443
PkrI	GCNGC	5 cut(s)	265, 288, 379, 853, 1398
PleI	GAGTC	6 cut(s)	277, 322, 509, 550, 865, 896
PpsI	GAGTC	6 cut(s)	277, 322, 509, 550, 865, 896
PpuMI	RGGWCCY	1 cut(s)	1316
PsiI	TTATAA	1 cut(s)	251
Psp5II	RGGWCCY	1 cut(s)	1316
Psp6I	CCWGG	9 cut(s)	82, 567, 991, 1078, 1099, 1291, 1318, 1384, 1581
PspGI	CCWGG	9 cut(s)	82, 567, 991, 1078, 1099, 1291, 1318, 1384, 1581
PspN4I	GGNNCC	8 cut(s)	722, 1037, 1113, 1182, 1234, 1297, 1317, 1644
PspOMI	GGGCCC	2 cut(s)	1180, 1232
PspPPI	RGGWCCY	1 cut(s)	1316
PstI	CTGCAG	1 cut(s)	523
PstNI	CAGNNNCTG	1 cut(s)	272
PsuI	RGATCY	2 cut(s)	206, 1459
PsyI	GACNNNGTC	1 cut(s)	923
RsaI	GTAC	4 cut(s)	26, 140, 456, 1580
RsaNI	GTAC	4 cut(s)	25, 139, 455, 1579
SaqAI	TTAA	5 cut(s)	420, 501, 536, 677, 1227
SatI	GCNGC	5 cut(s)	264, 287, 378, 852, 1397
Sau3AI	GATC	4 cut(s)	206, 1459, 1480, 1505
SchI	GAGTC	6 cut(s)	278, 322, 509, 550, 866, 897
SduI	GDGCHC	4 cut(s)	780, 1184, 1236, 1716
SexAI	ACCWGGT	1 cut(s)	1291
SfaNI	GCATC	5 cut(s)	809, 1074, 1108, 1515, 1690
SfcI	CTRYAG	1 cut(s)	519
SinI	GGWCC	9 cut(s)	50, 86, 1112, 1133, 1205, 1295, 1316, 1328, 1538
SmlI	CTYRAG	3 cut(s)	393, 715, 815
SmoI	CTYRAG	3 cut(s)	393, 715, 815
SsiI	CCGC	4 cut(s)	216, 1397, 1651, 1691
SspMI	CTAG	7 cut(s)	32, 360, 405, 773, 1052, 1209, 1717
StyI	CCWWGG	3 cut(s)	1208, 1463, 1513
TaaI	ACNGT	2 cut(s)	434, 1625
TaiI	ACGT	1 cut(s)	1327
TaqI	TCGA	4 cut(s)	155, 513, 559, 1483
TauI	GCSGC	1 cut(s)	1399
TfiI	GAWTC	3 cut(s)	9, 121, 491
Tru1I	TTAA	5 cut(s)	420, 501, 536, 677, 1227
Tru9I	TTAA	5 cut(s)	420, 501, 536, 677, 1227
TscAI	CASTG	2 cut(s)	750, 1630
TseFI	GTSAC	2 cut(s)	710, 965
TseI	GCWGC	4 cut(s)	263, 286, 377, 851
Tsp45I	GTSAC	2 cut(s)	710, 965
TspDTI	ATGAA	4 cut(s)	222, 504, 519, 957
TspGWI	ACGGA	2 cut(s)	190, 442
TspRI	CASTG	2 cut(s)	750, 1630
Tth111I	GACNNNGTC	1 cut(s)	923
Van91I	CCANNNNNTGG	1 cut(s)	902
VpaK11BI	GGWCC	9 cut(s)	50, 86, 1112, 1133, 1205, 1295, 1316, 1328, 1538
XapI	RAATTY	2 cut(s)	133, 439
XceI	RCATGY	1 cut(s)	74
XcmI	CCANNNNNNNNNTGG	3 cut(s)	176, 992, 1589
XmaJI	CCTAGG	1 cut(s)	1208
XmnI	GAANNNNTTC	1 cut(s)	111
XspI	CTAG	7 cut(s)	32, 360, 405, 773, 1052, 1209, 1717

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.