Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0010470

Physical Location & Seq

Genomic Coordinates Forward (+)

40886354 .. 40898911

Gene Structure 12558 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1274200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGGAGGACTCGGACGGAGTCCTCAACTTCGACTTCGAGGGCGGCCTCGATGCCGCCGCCACCGTCTCGGCCACTGCGGGCCCCGCCAACACGGGCCCAGCATCTAATTATTCCGTGATGCAATCAGACTCCGCCGTCACCGGGGCCGGCGGGGCGGGCTCCAACCAGGCTGCTGTGGCGCAGCAGCCCAATCAGAATGCGAACCGGATGGGTGGGCGGAGCTATCGCCAGACGGTGTGTCGTCACTGGCTGCGCAGCCTTTGTATGAAGGGCGAGGCCTGTGGGTTCCTCCACCAATACGACAAGTCGCGCATGCCCGTGTGCCGCTTCTTCCGGTTGTATGGTGAGTGCCGCGAGCAGGACTGCGTGTACAAGCACACTAACGAGGACATCAAAGAGTGCAATATGTACAAGTTGGGTTTTTGTCCAAATGGTCCTGATTGCCGGTATAGACACGCAAAGCTGCCGGGACCTCCACCTCCAGTGGAAGAAGTCCTTCAGAAGATCCAGCATTTGAATTCTTACAATTACAACAACTCAAATAAGTTCTATCAACAAAGGAATGCTGGTTTTCCCCAACAAGGAGAGAAATACCAACCTGCACAAGGACCCAACAATTTTGTGGGAAAACCTACTACAGCAGAGTCTGGGAATGTTCAGCAGCAGCAACAGCTTCAACAAACCCAACAACAGGTTGGCCCCGCACAGACACAAAATCTTCCTTCTGGCCTAGCTAATCAGGCAAATAGAAGTGCGTTGCCTTTGCCTCAAGGAACATCTAGGTATTTTATTGTTAAAAGTTGCAACCGTGAAAATTTGGAATTATCTGTACAACAAGGAGTATGGGCAACCCAAAGGAGCAATGAATCCAAACTTAATGAAGCTTTTGACTCTGCTGAAAATGTGATTTTAATTTTCTCAGTCAACCGGACTCGACATTTCCAGGGTTGTGCAAAGATGATGTCCAGAATTGGTGGGTCAGTTGGTGGAGGGAACTGGAAATATGCACACGGAACTGCGCATTACGGGCGAAATTTCTCTGTCAAATGGTTAAAGCTATGTGAACTGTCCTTTCACAAAACTCGTCATTTGAGGAATCCCTACAATGAGAACCTACCAGTGAAGATAAGTAGAGATTGTCAAGAGCTAGAGCAATCCGTCGGTGAGCAGTTGGCTTCCTTGCTTTATCTTGAGCCAGATAGTGAACTTATGGCAATTTCAATTGCGGCAGAATCAAAACGTGAAGAAGAAAAAGCAAAGGGAGTCAATCCAGAGAATGGTGGTGAGAATCCAGACATTGTCCCATTTGAGGACAATGAAGAGGAGGAAGAGGAAGAAAGTGAAGATGAGGAAGATAGCTTCGGTCAGGTTCCCGGAGCAGGAAATGATGGCAGAGGAAGGGGCAGGGGAGGAGTCATGTGGCCACCTCACATGCCTCTACCAAGAGGTGGCAGACCTATGCCCGGGATGCAAGGTTTTCCCCCAGGAATGATGGGTCCTGATGCAATGCCTTATGGCCCTGACGGATTTGTTATGCCAAATCCTTTTGGTATGGGCCCTCGGGGTTTCAATCCGTATGGTCCCAGGTTTTCAGGTGACTTTACAGTGCCCAACCCTGGCATGATGTTCCGTGGACGGCCACAACAACCTGGGTTTCCACCTGGTGGGTTTGGGATTATGGGTCCTGGACGAGCACCATTTATGGGAGGCCCCCATCCAGGCCGAGGTGGTCGGCCAACTGGTATATCTCCAATGTTTCCACCACCCCCGCCACTATTATCTCAAAACCCTAACTGGATGCCGAAGAGAGATCCAAGGGGAGCTTCCAGTGATCGGAGAGGACAAGATATGACAGGTTCGGCTGGGGGACCAGATGATGAGGCACTTTATGGTGCTGGAAACAACTCTAGAAATGATGACAGTGACAGTGAGGATGAGGCCCCGAGGCGGTCGAGGCATGGAGAGGGAAAGAAGAAACGGCGAGACTCGGAAGGAGATGCGACCTCCGAGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010363 GO:0010467 GO:0010468 GO:0010646 GO:0010941 GO:0010942 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0023051 GO:0031123 GO:0031124 GO:0031323 GO:0031347 GO:0031349 GO:0031440 GO:0031974 GO:0031981 GO:0032991 GO:0034052 GO:0034641 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050684 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1900363 GO:1901360 GO:1901363 GO:1903311 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

ko03015 ko05164 map03015 map05164

Pfam Domains

Protein Families

YTH

Protein Analysis

672

Amino Acids

73.47

Weight (kDa)

6.21

Isoelectric Point (pI)

55.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YTH	PF04146	260 - 394	3.5e-47	YT521-B-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30460 AT1G30460 AT1G30460
fragaria_vesca	FvH4_3g09980
malus_domestica	MD05G1274200.v1.1 MD10G1253900.v1.1
prunus_persica	Prupe.4G089500_v2.0.a1
pyrus_communis	pycom05g25560 pycom10g20950
rosa_chinensis	RchiOBHm_Chr5g0015731 RchiOBHm_Chr5g0015861
rosa_laevigata	RLG00000032226
rosa_multiflora	Rmu_sc0000012.1_g000002
rosa_roxburghii	Rroxscaffold_1G00060740
rosa_rugosa	Rorug05G0029600
rosa_samantha	Rh5AG123200 Rh5BG122100 Rh5CG132200 Rh5CG133300 Rh5DG121500
rosa_wichuraiana	Rw5G010630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	134
Acc16I	TGCGCA	2 cut(s)	254, 1020
Acc36I	ACCTGC	1 cut(s)	607
AccB7I	CCANNNNNTGG	3 cut(s)	1277, 1448, 1664
AccII	CGCG	2 cut(s)	310, 354
AclWI	GGATC	2 cut(s)	499, 1805
AcoI	YGGCCR	4 cut(s)	69, 1421, 1637, 1733
AcsI	RAATTY	3 cut(s)	517, 814, 1033
AcuI	CTGAAG	1 cut(s)	482
AdeI	CACNNNGTG	1 cut(s)	1664
AfaI	GTAC	3 cut(s)	371, 410, 831
AgsI	TTSAA	4 cut(s)	517, 677, 1221, 1570
AhdI	GACNNNNNGTC	1 cut(s)	237
AjnI	CCWGG	9 cut(s)	165, 942, 1483, 1583, 1615, 1648, 1660, 1684, 1717
AjuI	GAANNNNNNNTTGG	2 cut(s)	1807, 1839
AluBI	AGCT	9 cut(s)	222, 463, 673, 734, 884, 1057, 1147, 1359, 1823
AluI	AGCT	9 cut(s)	222, 463, 673, 734, 884, 1057, 1147, 1359, 1823
Alw21I	GWGCWC	2 cut(s)	1696, 2013
Alw26I	GTCTC	2 cut(s)	70, 1977
AlwI	GGATC	2 cut(s)	499, 1805
AlwNI	CAGNNNCTG	1 cut(s)	647
Ama87I	CYCGRG	3 cut(s)	1463, 1560, 1942
ApaI	GGGCCC	3 cut(s)	83, 98, 1559
ApeKI	GCWGC	8 cut(s)	170, 181, 184, 250, 255, 463, 661, 664
ApoI	RAATTY	3 cut(s)	517, 814, 1033
ArsI	GACNNNNNNTTYG	2 cut(s)	947, 979
Asp700I	GAANNNNTTC	1 cut(s)	495
AspLEI	GCGC	4 cut(s)	181, 255, 312, 1021
AsuC2I	CCSGG	5 cut(s)	142, 468, 1374, 1464, 1465
AsuHPI	GGTGA	5 cut(s)	130, 356, 1175, 1295, 1607
AvaI	CYCGRG	3 cut(s)	1463, 1560, 1942
AvaII	GGWCC	7 cut(s)	434, 470, 608, 1496, 1580, 1682, 1868
BaeGI	GKGCMC	4 cut(s)	83, 98, 1559, 1611
BalI	TGGCCA	1 cut(s)	1423
BanII	GRGCYC	4 cut(s)	83, 98, 161, 1559
Bbv12I	GWGCWC	2 cut(s)	1696, 2013
BbvI	GCAGC	8 cut(s)	157, 193, 196, 237, 267, 450, 673, 676
BccI	CCATC	4 cut(s)	202, 1382, 1486, 1722
BceAI	ACGGC	3 cut(s)	119, 1652, 1994
BciT130I	CCWGG	9 cut(s)	167, 944, 1485, 1585, 1617, 1650, 1662, 1686, 1719
BcnI	CCSGG	5 cut(s)	142, 468, 1374, 1464, 1465
BcoDI	GTCTC	2 cut(s)	70, 1977
BfaI	CTAG	5 cut(s)	731, 780, 1148, 1908, 2014
BfmI	CTRYAG	1 cut(s)	636
BfuAI	ACCTGC	1 cut(s)	607
BglI	GCCNNNNNGGC	1 cut(s)	152
Bme18I	GGWCC	7 cut(s)	434, 470, 608, 1496, 1580, 1682, 1868
BmeRI	GACNNNNNGTC	1 cut(s)	237
BmeT110I	CYCGRG	3 cut(s)	1463, 1560, 1942
BmsI	GCATC	7 cut(s)	40, 108, 110, 1458, 1492, 1788, 1987
BpmI	CTGGAG	1 cut(s)	465
BpuEI	CTTGAG	2 cut(s)	753, 1211
BpuMI	CCSGG	5 cut(s)	142, 468, 1374, 1464, 1465
BsaWI	WCCGGW	3 cut(s)	204, 333, 927
Bse118I	RCCGGY	2 cut(s)	146, 444
Bse1I	ACTGG	7 cut(s)	251, 482, 1001, 1118, 1744, 1799, 1827
Bse3DI	GCAATG	2 cut(s)	868, 1512
BseBI	CCWGG	9 cut(s)	167, 944, 1485, 1585, 1617, 1650, 1662, 1686, 1719
BseGI	GGATG	5 cut(s)	213, 1473, 1714, 1803, 1939
BseMI	GCAATG	2 cut(s)	868, 1512
BseMII	CTCAG	1 cut(s)	933
BseNI	ACTGG	7 cut(s)	251, 482, 1001, 1118, 1744, 1799, 1827
BseRI	GAGGAG	2 cut(s)	1337, 1425
BseSI	GKGCMC	4 cut(s)	83, 98, 1559, 1611
BseXI	GCAGC	8 cut(s)	157, 193, 196, 237, 267, 450, 673, 676
BseYI	CCCAGC	2 cut(s)	97, 1862
BsgI	GTGCAG	1 cut(s)	585
Bsh1236I	CGCG	2 cut(s)	310, 354
Bsh1285I	CGRYCG	1 cut(s)	1952
BsiEI	CGRYCG	1 cut(s)	1952
BsiHKAI	GWGCWC	2 cut(s)	1696, 2013
BsiHKCI	CYCGRG	3 cut(s)	1463, 1560, 1942
BsiSI	CCGG	9 cut(s)	141, 147, 205, 334, 445, 467, 928, 1374, 1464
BslFI	GGGAC	4 cut(s)	483, 1286, 1566, 1881
BsmAI	GTCTC	2 cut(s)	70, 1977
BsmBI	CGTCTC	1 cut(s)	70
BsmFI	GGGAC	4 cut(s)	483, 1286, 1566, 1881
BsmI	GAATGC	2 cut(s)	202, 568
BsoBI	CYCGRG	3 cut(s)	1463, 1560, 1942
Bsp120I	GGGCCC	3 cut(s)	79, 94, 1555
Bsp1286I	GDGCHC	7 cut(s)	83, 98, 161, 1559, 1611, 1696, 2013
Bsp1407I	TGTACA	3 cut(s)	369, 408, 829
Bsp143I	GATC	3 cut(s)	504, 1810, 1831
BspCNI	CTCAG	1 cut(s)	932
BspFNI	CGCG	2 cut(s)	310, 354
BspMI	ACCTGC	1 cut(s)	607
BspPI	GGATC	2 cut(s)	499, 1805
BsrDI	GCAATG	2 cut(s)	868, 1512
BsrFI	RCCGGY	2 cut(s)	146, 444
BsrGI	TGTACA	3 cut(s)	369, 408, 829
BsrI	ACTGG	7 cut(s)	251, 482, 1001, 1118, 1744, 1799, 1827
BssAI	RCCGGY	2 cut(s)	146, 444
BssMI	GATC	3 cut(s)	504, 1810, 1831
BssT1I	CCWWGG	1 cut(s)	1814
Bst2UI	CCWGG	9 cut(s)	167, 944, 1485, 1585, 1617, 1650, 1662, 1686, 1719
Bst4CI	ACNGT	7 cut(s)	64, 235, 809, 1068, 1606, 1922, 1928
Bst6I	CTCTTC	3 cut(s)	1314, 1323, 1799
BstAUI	TGTACA	3 cut(s)	369, 408, 829
BstC8I	GCNNGC	5 cut(s)	79, 148, 157, 314, 356
BstDEI	CTNAG	1 cut(s)	919
BstDSI	CCRYGG	1 cut(s)	1630
BstENI	CCTNNNNNAGG	1 cut(s)	603
BstF5I	GGATG	5 cut(s)	213, 1473, 1714, 1803, 1939
BstFNI	CGCG	2 cut(s)	310, 354
BstHHI	GCGC	4 cut(s)	181, 255, 312, 1021
BstKTI	GATC	3 cut(s)	507, 1813, 1834
BstMAI	GTCTC	2 cut(s)	70, 1977
BstMBI	GATC	3 cut(s)	504, 1810, 1831
BstMCI	CGRYCG	1 cut(s)	1952
BstMWI	GCNNNNNNNGC	9 cut(s)	83, 152, 156, 176, 670, 740, 1027, 1468, 1954
BstNI	CCWGG	9 cut(s)	167, 944, 1485, 1585, 1617, 1650, 1662, 1686, 1719
BstNSI	RCATGY	2 cut(s)	316, 1435
BstSFI	CTRYAG	1 cut(s)	636
BstSLI	GKGCMC	4 cut(s)	83, 98, 1559, 1611
BstUI	CGCG	2 cut(s)	310, 354
BstV1I	GCAGC	8 cut(s)	157, 193, 196, 237, 267, 450, 673, 676
BstX2I	RGATCY	2 cut(s)	504, 1810
BstYI	RGATCY	2 cut(s)	504, 1810
BtgI	CCRYGG	1 cut(s)	1630
BtsCI	GGATG	5 cut(s)	213, 1473, 1714, 1803, 1939
BtsI	GCAGTG	1 cut(s)	72
BtsIMutI	CAGTG	8 cut(s)	72, 244, 489, 1125, 1611, 1834, 1927, 1933
BveI	ACCTGC	1 cut(s)	607
Cac8I	GCNNGC	5 cut(s)	79, 148, 157, 314, 356
CaiI	CAGNNNCTG	1 cut(s)	647
CfoI	GCGC	4 cut(s)	181, 255, 312, 1021
Cfr10I	RCCGGY	2 cut(s)	146, 444
Cfr9I	CCCGGG	1 cut(s)	1463
CsiI	ACCWGGT	1 cut(s)	1660
Csp6I	GTAC	3 cut(s)	370, 409, 830
CviAII	CATG	5 cut(s)	313, 1417, 1432, 1621, 1958
CviQI	GTAC	3 cut(s)	370, 409, 830
DdeI	CTNAG	1 cut(s)	919
DpnI	GATC	3 cut(s)	506, 1812, 1833
DpnII	GATC	3 cut(s)	504, 1810, 1831
DraIII	CACNNNGTG	1 cut(s)	1664
DrdI	GACNNNNNNGTC	1 cut(s)	134
DriI	GACNNNNNGTC	1 cut(s)	237
DseDI	GACNNNNNNGTC	1 cut(s)	134
EaeI	YGGCCR	4 cut(s)	69, 1421, 1637, 1733
Eam1104I	CTCTTC	3 cut(s)	1314, 1323, 1799
Eam1105I	GACNNNNNGTC	1 cut(s)	237
EarI	CTCTTC	3 cut(s)	1314, 1323, 1799
EciI	GGCGGA	2 cut(s)	121, 232
Eco130I	CCWWGG	1 cut(s)	1814
Eco147I	AGGCCT	1 cut(s)	278
Eco24I	GRGCYC	4 cut(s)	83, 98, 161, 1559
Eco47I	GGWCC	7 cut(s)	434, 470, 608, 1496, 1580, 1682, 1868
Eco57I	CTGAAG	1 cut(s)	482
Eco88I	CYCGRG	3 cut(s)	1463, 1560, 1942
EcoNI	CCTNNNNNAGG	1 cut(s)	603
EcoO109I	RGGNCCY	8 cut(s)	80, 470, 608, 1496, 1556, 1682, 1709, 1939
EcoRI	GAATTC	1 cut(s)	517
EcoRII	CCWGG	9 cut(s)	165, 942, 1483, 1583, 1615, 1648, 1660, 1684, 1717
EcoT14I	CCWWGG	1 cut(s)	1814
EcoT38I	GRGCYC	4 cut(s)	83, 98, 161, 1559
ErhI	CCWWGG	1 cut(s)	1814
Esp3I	CGTCTC	1 cut(s)	70
FaeI	CATG	5 cut(s)	316, 1420, 1435, 1624, 1961
FalI	AAGNNNNNCTT	4 cut(s)	480, 512, 1807, 1839
FaqI	GGGAC	4 cut(s)	483, 1286, 1566, 1881
FatI	CATG	5 cut(s)	312, 1416, 1431, 1620, 1957
FauI	CCCGC	6 cut(s)	70, 91, 143, 148, 709, 1776
FokI	GGATG	5 cut(s)	220, 1480, 1701, 1810, 1946
FriOI	GRGCYC	4 cut(s)	83, 98, 161, 1559
FspBI	CTAG	5 cut(s)	731, 780, 1148, 1908, 2014
FspI	TGCGCA	2 cut(s)	254, 1020
GlaI	GCGC	4 cut(s)	180, 254, 311, 1020
GsaI	CCCAGC	2 cut(s)	101, 1866
GsuI	CTGGAG	1 cut(s)	465
HapII	CCGG	9 cut(s)	141, 147, 205, 334, 445, 467, 928, 1374, 1464
HhaI	GCGC	4 cut(s)	181, 255, 312, 1021
Hin1II	CATG	5 cut(s)	316, 1420, 1435, 1624, 1961
Hin6I	GCGC	4 cut(s)	179, 253, 310, 1019
HinP1I	GCGC	4 cut(s)	179, 253, 310, 1019
HincII	GTYRAC	1 cut(s)	925
HindII	GTYRAC	1 cut(s)	925
HindIII	AAGCTT	1 cut(s)	882
HpaII	CCGG	9 cut(s)	141, 147, 205, 334, 445, 467, 928, 1374, 1464
HphI	GGTGA	5 cut(s)	130, 356, 1175, 1295, 1607
Hpy166II	GTNNAC	5 cut(s)	370, 925, 1064, 1205, 1634
Hpy188I	TCNGA	7 cut(s)	13, 127, 195, 501, 1836, 1990, 2008
Hpy188III	TCNNGA	8 cut(s)	437, 966, 1142, 1190, 1271, 1292, 1499, 1908
Hpy8I	GTNNAC	5 cut(s)	370, 925, 1064, 1205, 1634
Hpy99I	CGWCG	1 cut(s)	1163
HpyAV	CCTTC	5 cut(s)	262, 506, 732, 1392, 1985
HpyCH4III	ACNGT	7 cut(s)	64, 235, 809, 1068, 1606, 1922, 1928
HpyCH4IV	ACGT	1 cut(s)	1240
HpyCH4V	TGCA	8 cut(s)	121, 402, 602, 804, 953, 1007, 1471, 1505
HpyF10VI	GCNNNNNNNGC	9 cut(s)	83, 152, 156, 176, 670, 740, 1027, 1468, 1954
HpyF3I	CTNAG	1 cut(s)	919
HpySE526I	ACGT	1 cut(s)	1240
Hsp92II	CATG	5 cut(s)	316, 1420, 1435, 1624, 1961
HspAI	GCGC	4 cut(s)	179, 253, 310, 1019
KroI	GCCGGC	1 cut(s)	146
KroNI	GCCGGC	1 cut(s)	148
Kzo9I	GATC	3 cut(s)	504, 1810, 1831
LmnI	GCTCC	5 cut(s)	164, 219, 858, 1376, 1820
Lsp1109I	GCAGC	8 cut(s)	157, 193, 196, 237, 267, 450, 673, 676
LweI	GCATC	7 cut(s)	40, 108, 110, 1458, 1492, 1788, 1987
MabI	ACCWGGT	1 cut(s)	1660
MaeI	CTAG	5 cut(s)	731, 780, 1148, 1908, 2014
MaeII	ACGT	1 cut(s)	1240
MaeIII	GTNAC	4 cut(s)	136, 242, 1595, 1922
MalI	GATC	3 cut(s)	506, 1812, 1833
MboI	GATC	3 cut(s)	504, 1810, 1831
MfeI	CAATTG	1 cut(s)	1221
MflI	RGATCY	2 cut(s)	504, 1810
MhlI	GDGCHC	7 cut(s)	83, 98, 161, 1559, 1611, 1696, 2013
MlsI	TGGCCA	1 cut(s)	1423
MluNI	TGGCCA	1 cut(s)	1423
MlyI	GAGTC	9 cut(s)	2, 27, 122, 653, 884, 925, 1272, 1422, 1979
MmeI	TCCRAC	1 cut(s)	186
Mox20I	TGGCCA	1 cut(s)	1423
MroNI	GCCGGC	1 cut(s)	146
MroXI	GAANNNNTTC	1 cut(s)	495
MscI	TGGCCA	1 cut(s)	1423
MseI	TTAA	4 cut(s)	795, 876, 911, 1052
MslI	CAYNNNNRTG	1 cut(s)	317
Msp20I	TGGCCA	1 cut(s)	1423
MspI	CCGG	9 cut(s)	141, 147, 205, 334, 445, 467, 928, 1374, 1464
MunI	CAATTG	1 cut(s)	1221
Mva1269I	GAATGC	2 cut(s)	202, 568
MvaI	CCWGG	9 cut(s)	167, 944, 1485, 1585, 1617, 1650, 1662, 1686, 1719
MvnI	CGCG	2 cut(s)	310, 354
MwoI	GCNNNNNNNGC	9 cut(s)	83, 152, 156, 176, 670, 740, 1027, 1468, 1954
NaeI	GCCGGC	1 cut(s)	148
NciI	CCSGG	5 cut(s)	142, 468, 1374, 1464, 1465
NdeII	GATC	3 cut(s)	504, 1810, 1831
NgoMIV	GCCGGC	1 cut(s)	146
NlaIII	CATG	5 cut(s)	316, 1420, 1435, 1624, 1961
NmeAIII	GCCGAG	2 cut(s)	47, 1748
NmuCI	GTSAC	4 cut(s)	136, 242, 1595, 1922
NsbI	TGCGCA	2 cut(s)	254, 1020
NspI	RCATGY	2 cut(s)	316, 1435
PaeI	GCATGC	1 cut(s)	316
PceI	AGGCCT	1 cut(s)	278
PctI	GAATGC	2 cut(s)	202, 568
PdiI	GCCGGC	1 cut(s)	148
PdmI	GAANNNNTTC	1 cut(s)	495
PfeI	GAWTC	4 cut(s)	866, 1096, 1232, 1288
PflFI	GACNNNGTC	2 cut(s)	17, 1298
PflMI	CCANNNNNTGG	3 cut(s)	1277, 1448, 1664
PfoI	TCCNGGA	2 cut(s)	1372, 1684
PleI	GAGTC	9 cut(s)	2, 26, 122, 652, 884, 925, 1271, 1421, 1979
PpsI	GAGTC	9 cut(s)	2, 26, 122, 652, 884, 925, 1271, 1421, 1979
PpuMI	RGGWCCY	4 cut(s)	470, 608, 1496, 1682
Psp5II	RGGWCCY	4 cut(s)	470, 608, 1496, 1682
Psp6I	CCWGG	9 cut(s)	165, 942, 1483, 1583, 1615, 1648, 1660, 1684, 1717
PspFI	CCCAGC	2 cut(s)	97, 1862
PspGI	CCWGG	9 cut(s)	165, 942, 1483, 1583, 1615, 1648, 1660, 1684, 1717
PspOMI	GGGCCC	3 cut(s)	79, 94, 1555
PspPPI	RGGWCCY	4 cut(s)	470, 608, 1496, 1682
PstNI	CAGNNNCTG	1 cut(s)	647
PsuI	RGATCY	2 cut(s)	504, 1810
PsyI	GACNNNGTC	2 cut(s)	17, 1298
RsaI	GTAC	3 cut(s)	371, 410, 831
RsaNI	GTAC	3 cut(s)	370, 409, 830
RseI	CAYNNNNRTG	1 cut(s)	317
SaqAI	TTAA	4 cut(s)	795, 876, 911, 1052
Sau3AI	GATC	3 cut(s)	504, 1810, 1831
SchI	GAGTC	9 cut(s)	2, 27, 122, 653, 884, 925, 1272, 1422, 1979
SduI	GDGCHC	7 cut(s)	83, 98, 161, 1559, 1611, 1696, 2013
SexAI	ACCWGGT	1 cut(s)	1660
SfaNI	GCATC	7 cut(s)	40, 108, 110, 1458, 1492, 1788, 1987
SfcI	CTRYAG	1 cut(s)	636
SinI	GGWCC	7 cut(s)	434, 470, 608, 1496, 1580, 1682, 1868
SmaI	CCCGGG	1 cut(s)	1465
SmiMI	CAYNNNNRTG	1 cut(s)	317
SmlI	CTYRAG	2 cut(s)	768, 1190
SmoI	CTYRAG	2 cut(s)	768, 1190
SphI	GCATGC	1 cut(s)	316
SseBI	AGGCCT	1 cut(s)	278
SspMI	CTAG	5 cut(s)	731, 780, 1148, 1908, 2014
StuI	AGGCCT	1 cut(s)	278
StyI	CCWWGG	1 cut(s)	1814
TaaI	ACNGT	7 cut(s)	64, 235, 809, 1068, 1606, 1922, 1928
TaiI	ACGT	1 cut(s)	1243
TaqI	TCGA	5 cut(s)	30, 36, 48, 934, 1952
TaqII	GACCGA	1 cut(s)	1352
TatI	WGTACW	3 cut(s)	369, 408, 829
TauI	GCSGC	6 cut(s)	45, 56, 59, 327, 354, 1229
TfiI	GAWTC	4 cut(s)	866, 1096, 1232, 1288
Tru1I	TTAA	4 cut(s)	795, 876, 911, 1052
Tru9I	TTAA	4 cut(s)	795, 876, 911, 1052
TscAI	CASTG	8 cut(s)	79, 251, 489, 1125, 1611, 1834, 1927, 1933
TseFI	GTSAC	4 cut(s)	136, 242, 1595, 1922
TseI	GCWGC	8 cut(s)	170, 181, 184, 250, 255, 463, 661, 664
Tsp45I	GTSAC	4 cut(s)	136, 242, 1595, 1922
TspDTI	ATGAA	4 cut(s)	281, 879, 894, 1332
TspGWI	ACGGA	7 cut(s)	30, 103, 1026, 1147, 1539, 1563, 1619
TspMI	CCCGGG	1 cut(s)	1463
TspRI	CASTG	8 cut(s)	79, 251, 489, 1125, 1611, 1834, 1927, 1933
Tth111I	GACNNNGTC	2 cut(s)	17, 1298
Van91I	CCANNNNNTGG	3 cut(s)	1277, 1448, 1664
VpaK11BI	GGWCC	7 cut(s)	434, 470, 608, 1496, 1580, 1682, 1868
XagI	CCTNNNNNAGG	1 cut(s)	603
XapI	RAATTY	3 cut(s)	517, 814, 1033
XbaI	TCTAGA	1 cut(s)	1907
XceI	RCATGY	2 cut(s)	316, 1435
XcmI	CCANNNNNNNNNTGG	2 cut(s)	619, 692
XmaI	CCCGGG	1 cut(s)	1463
XmnI	GAANNNNTTC	1 cut(s)	495
XspI	CTAG	5 cut(s)	731, 780, 1148, 1908, 2014

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.