Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0010470

Physical Location & Seq

Genomic Coordinates Reverse (-)

82985139 .. 82990733

Gene Structure 5595 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00060740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGGAGGACTCAGATGGAGTCCTCAACTTCGACTTCGAGGGCGGCCTCGACACCACCGCCGTCGCCGGCCCCACCCACACCGGCCCGGCCTCCAACGCCCCGATCCAGTCCGACTCCTTCGTCGCGCAGTCCAACAACCAAGCCGCCGCCGCGCCACAACCCGACCCGAATGTCAACCCCTCGGGCCGGAAGAGCTTCCGGCAAACGGTGTGTCGTCACTGGCTTCGCAGCCTCTGTATGAAGGGCGAGGCTTGCGGCTTCCTTCACCAATACGACAAGTCGCGCATGCCGGTGTGCCGGTTCTTCCGTATGTACGGCGAGTGTAGGGAGCAGGATTGCGTGTATAAGCACACCAACGAGGACATTAAAGAGTGTAATATGTACAAGCTAGGTTTTTGTCCAAATGGTCCTGATTGCCGGTATAGACATGCAAAGCTTCCTGGACCTCCACCCCCTGTGGAAGAAGTGCTTCAGAAGATTCAGCATTTGAATTCGTACAATTACAACAACTCGAATAAGTTTTTCCAACAACGGAATGGTGGTTTTCCCCAACAACCTGATCGATCTCAGCCCGCACAAGTAGCCAATTCATTCAATCAAGTGGTTATAAGACCTTCAGCAGCAGAGTCTGCTAATGTCCAGCAGCCTCAACAATTTCAGCAAACACAACAACAGGTTGGCCAGACTCAGGCACAGAGTATTCCCAATGGCCTGGCTAGTCAGGCAAATAGAGCCGCATTGCCCTTGCCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAACCGTGAAAATTTGGAATTATCCGTACAACAAGGAGTATGGGCAACTCAAAGGAGCAATGAATCCAAACTTAACGAAGCTTTCGACGCTGCAGAAAATGTCATTTTAATTTTCTCAGTCAACCGGACTCGACATTTCCAGGGTTGTGCAAAGATGATGTCCAGAATTGGTGGGTCTGTTAGTGGAGGGAACTGGAAATATGCACATGGAACTGCACATTACGGGCGTAATTTCTCAGTCAAATGGTTAAAGCTATGTGAACTGTCCTTTCACAAAACTCGTCACTTGAGGAATCCATACAATGAGAACTTACCAGTGAAGATAAGCAGAGATTGTCAAGAGCTAGAGCCCTCCGTTGGTGAGCAGTTGGCATCCTTGCTTTATCTTGAGCCAGATAGTGAACTTATGGCAATCTCCATTGCAGCAGAGTCAAAACGAGAAGAAGAAAAAGCAAAGGGAGTCAATCCAGAGAATGGTGGCGAGAACCCAGACATTGTCCCATTTGAGGACAATGAAGAAGAGGAAGAGGAAGAAAGTGACGATGAGGAAGACTACCAAGTTCCTGGTGGAGCAAATGAGATCAGAGGAAGGGGCAGAGGTATGTGGCCCCCTCATATGCCACTAGGAGGAAGAGGTGGCAGACCTATGCCTGGGATGCAGGGTTTCCCCCTGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010363 GO:0010467 GO:0010468 GO:0010646 GO:0010941 GO:0010942 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0023051 GO:0031123 GO:0031124 GO:0031323 GO:0031347 GO:0031349 GO:0031440 GO:0031974 GO:0031981 GO:0032991 GO:0034052 GO:0034641 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050684 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1900363 GO:1901360 GO:1901363 GO:1903311 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

ko03015 ko05164 map03015 map05164

Pfam Domains

Protein Families

YTH

Protein Analysis

487

Amino Acids

54.41

Weight (kDa)

5.82

Isoelectric Point (pI)

55.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YTH	PF04146	254 - 388	7.2e-48	YT521-B-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30460 AT1G30460 AT1G30460
fragaria_vesca	FvH4_3g09980
malus_domestica	MD05G1274200.v1.1 MD10G1253900.v1.1
prunus_persica	Prupe.4G089500_v2.0.a1
pyrus_communis	pycom05g25560 pycom10g20950
rosa_chinensis	RchiOBHm_Chr5g0015731 RchiOBHm_Chr5g0015861
rosa_laevigata	RLG00000032226
rosa_multiflora	Rmu_sc0000012.1_g000002
rosa_roxburghii	Rroxscaffold_1G00060740
rosa_rugosa	Rorug05G0029600
rosa_samantha	Rh5AG123200 Rh5BG122100 Rh5CG132200 Rh5CG133300 Rh5DG121500
rosa_wichuraiana	Rw5G010630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	608
AasI	GACNNNNNNGTC	2 cut(s)	119, 170
AccB7I	CCANNNNNTGG	1 cut(s)	1259
AccII	CGCG	3 cut(s)	125, 152, 283
AciI	CCGC	8 cut(s)	42, 57, 144, 147, 150, 255, 573, 735
AclWI	GGATC	1 cut(s)	97
AcoI	YGGCCR	1 cut(s)	679
AcsI	RAATTY	2 cut(s)	490, 796
AcuI	CTGAAG	2 cut(s)	455, 600
AfaI	GTAC	4 cut(s)	314, 383, 497, 813
AfiI	CCNNNNNNNGG	8 cut(s)	186, 205, 688, 1142, 1259, 1291, 1412, 1436
AgsI	TTSAA	2 cut(s)	490, 595
AjnI	CCWGG	6 cut(s)	439, 711, 924, 1348, 1435, 1455
AluBI	AGCT	6 cut(s)	195, 388, 436, 866, 1039, 1129
AluI	AGCT	6 cut(s)	195, 388, 436, 866, 1039, 1129
AlwI	GGATC	1 cut(s)	97
AlwNI	CAGNNNCTG	2 cut(s)	234, 629
Ama87I	CYCGRG	1 cut(s)	181
AoxI	GGCC	8 cut(s)	43, 67, 82, 87, 184, 679, 709, 1391
ApeKI	GCWGC	5 cut(s)	228, 620, 643, 875, 1208
ApoI	RAATTY	2 cut(s)	490, 796
ArsI	GACNNNNNNTTYG	4 cut(s)	196, 228, 929, 961
Asp700I	GAANNNNTTC	2 cut(s)	194, 468
AspLEI	GCGC	3 cut(s)	127, 154, 285
AspS9I	GGNCC	6 cut(s)	68, 83, 184, 407, 443, 1392
AsuC2I	CCSGG	1 cut(s)	86
AsuHPI	GGTGA	2 cut(s)	257, 1157
AvaI	CYCGRG	1 cut(s)	181
AvaII	GGWCC	2 cut(s)	407, 443
BalI	TGGCCA	1 cut(s)	681
BanII	GRGCYC	1 cut(s)	1137
BbsI	GAAGAC	1 cut(s)	1341
BbvI	GCAGC	5 cut(s)	240, 632, 655, 862, 1220
BccI	CCATC	1 cut(s)	8
BceAI	ACGGC	2 cut(s)	44, 331
BciT130I	CCWGG	6 cut(s)	441, 713, 926, 1350, 1437, 1457
BcnI	CCSGG	1 cut(s)	86
BfaI	CTAG	5 cut(s)	389, 717, 762, 1130, 1409
BfmI	CTRYAG	1 cut(s)	876
Bme1390I	CCNGG	7 cut(s)	86, 441, 713, 926, 1350, 1437, 1457
Bme18I	GGWCC	2 cut(s)	407, 443
BmeT110I	CYCGRG	1 cut(s)	181
BmgT120I	GGNCC	6 cut(s)	68, 83, 184, 407, 443, 1392
BmiI	GGNNCC	2 cut(s)	70, 1394
BmrFI	CCNGG	7 cut(s)	86, 441, 713, 926, 1350, 1437, 1457
BmsI	GCATC	2 cut(s)	1166, 1431
BpiI	GAAGAC	1 cut(s)	1341
BpuEI	CTTGAG	3 cut(s)	735, 1093, 1193
BpuMI	CCSGG	1 cut(s)	86
Bsa29I	ATCGAT	1 cut(s)	562
BsaJI	CCNNGG	4 cut(s)	180, 925, 1436, 1455
BsaWI	WCCGGW	1 cut(s)	909
Bsc4I	CCNNNNNNNGG	8 cut(s)	186, 205, 688, 1142, 1259, 1291, 1412, 1436
Bse118I	RCCGGY	5 cut(s)	65, 80, 289, 297, 417
Bse1I	ACTGG	4 cut(s)	106, 224, 983, 1100
Bse3DI	GCAATG	3 cut(s)	737, 850, 1203
BseBI	CCWGG	6 cut(s)	441, 713, 926, 1350, 1437, 1457
BseCI	ATCGAT	1 cut(s)	562
BseDI	CCNNGG	4 cut(s)	180, 925, 1436, 1455
BseGI	GGATG	2 cut(s)	1157, 1446
BseLI	CCNNNNNNNGG	8 cut(s)	186, 205, 688, 1142, 1259, 1291, 1412, 1436
BseMI	GCAATG	3 cut(s)	737, 850, 1203
BseMII	CTCAG	5 cut(s)	24, 581, 701, 915, 1035
BseNI	ACTGG	4 cut(s)	106, 224, 983, 1100
BseXI	GCAGC	5 cut(s)	240, 632, 655, 862, 1220
BsgI	GTGCAG	1 cut(s)	984
Bsh1236I	CGCG	3 cut(s)	125, 152, 283
BshFI	GGCC	8 cut(s)	45, 69, 84, 89, 186, 681, 711, 1393
BshVI	ATCGAT	1 cut(s)	562
BsiHKCI	CYCGRG	1 cut(s)	181
BsiSI	CCGG	9 cut(s)	66, 81, 86, 187, 199, 290, 298, 418, 910
BslFI	GGGAC	1 cut(s)	1268
BslI	CCNNNNNNNGG	8 cut(s)	186, 205, 688, 1142, 1259, 1291, 1412, 1436
BsmFI	GGGAC	1 cut(s)	1268
BsnI	GGCC	8 cut(s)	45, 69, 84, 89, 186, 681, 711, 1393
BsoBI	CYCGRG	1 cut(s)	181
Bsp1286I	GDGCHC	1 cut(s)	1137
Bsp1407I	TGTACA	1 cut(s)	381
Bsp143I	GATC	4 cut(s)	102, 559, 563, 1365
BspACI	CCGC	8 cut(s)	42, 57, 144, 147, 150, 255, 573, 735
BspANI	GGCC	8 cut(s)	45, 69, 84, 89, 186, 681, 711, 1393
BspCNI	CTCAG	5 cut(s)	23, 580, 700, 914, 1034
BspDI	ATCGAT	1 cut(s)	562
BspFNI	CGCG	3 cut(s)	125, 152, 283
BspLI	GGNNCC	2 cut(s)	70, 1394
BspMAI	CTGCAG	1 cut(s)	880
BspPI	GGATC	1 cut(s)	97
BspQI	GCTCTTC	1 cut(s)	185
BsrDI	GCAATG	3 cut(s)	737, 850, 1203
BsrFI	RCCGGY	5 cut(s)	65, 80, 289, 297, 417
BsrGI	TGTACA	1 cut(s)	381
BsrI	ACTGG	4 cut(s)	106, 224, 983, 1100
BssAI	RCCGGY	5 cut(s)	65, 80, 289, 297, 417
BssECI	CCNNGG	4 cut(s)	180, 925, 1436, 1455
BssMI	GATC	4 cut(s)	102, 559, 563, 1365
Bst2UI	CCWGG	6 cut(s)	441, 713, 926, 1350, 1437, 1457
Bst4CI	ACNGT	3 cut(s)	208, 791, 1050
Bst6I	CTCTTC	4 cut(s)	185, 1299, 1305, 1411
BstAPI	GCANNNNNTGC	1 cut(s)	629
BstAUI	TGTACA	1 cut(s)	381
BstC8I	GCNNGC	4 cut(s)	67, 253, 287, 573
BstDEI	CTNAG	5 cut(s)	10, 567, 687, 901, 1021
BstF5I	GGATG	2 cut(s)	1157, 1446
BstFNI	CGCG	3 cut(s)	125, 152, 283
BstHHI	GCGC	3 cut(s)	127, 154, 285
BstKTI	GATC	4 cut(s)	105, 562, 566, 1368
BstMBI	GATC	4 cut(s)	102, 559, 563, 1365
BstNI	CCWGG	6 cut(s)	441, 713, 926, 1350, 1437, 1457
BstNSI	RCATGY	2 cut(s)	289, 431
BstSCI	CCNGG	7 cut(s)	84, 439, 711, 924, 1348, 1435, 1455
BstSFI	CTRYAG	1 cut(s)	876
BstUI	CGCG	3 cut(s)	125, 152, 283
BstV1I	GCAGC	5 cut(s)	240, 632, 655, 862, 1220
BstV2I	GAAGAC	1 cut(s)	1341
BstXI	CCANNNNNNTGG	2 cut(s)	712, 1349
Bsu15I	ATCGAT	1 cut(s)	562
BsuRI	GGCC	8 cut(s)	45, 69, 84, 89, 186, 681, 711, 1393
BsuTUI	ATCGAT	1 cut(s)	562
BtsCI	GGATG	2 cut(s)	1157, 1446
BtsIMutI	CAGTG	2 cut(s)	217, 1107
Cac8I	GCNNGC	4 cut(s)	67, 253, 287, 573
CaiI	CAGNNNCTG	2 cut(s)	234, 629
CfoI	GCGC	3 cut(s)	127, 154, 285
Cfr10I	RCCGGY	5 cut(s)	65, 80, 289, 297, 417
Cfr13I	GGNCC	6 cut(s)	68, 83, 184, 407, 443, 1392
ClaI	ATCGAT	1 cut(s)	562
CseI	GACGC	1 cut(s)	881
Csp6I	GTAC	4 cut(s)	313, 382, 496, 812
CviAII	CATG	3 cut(s)	286, 428, 992
CviQI	GTAC	4 cut(s)	313, 382, 496, 812
DdeI	CTNAG	5 cut(s)	10, 567, 687, 901, 1021
DpnI	GATC	4 cut(s)	104, 561, 565, 1367
DpnII	GATC	4 cut(s)	102, 559, 563, 1365
DrdI	GACNNNNNNGTC	2 cut(s)	119, 170
DseDI	GACNNNNNNGTC	2 cut(s)	119, 170
EaeI	YGGCCR	1 cut(s)	679
Eam1104I	CTCTTC	4 cut(s)	185, 1299, 1305, 1411
EarI	CTCTTC	4 cut(s)	185, 1299, 1305, 1411
Eco24I	GRGCYC	1 cut(s)	1137
Eco47I	GGWCC	2 cut(s)	407, 443
Eco57I	CTGAAG	2 cut(s)	455, 600
Eco88I	CYCGRG	1 cut(s)	181
EcoRI	GAATTC	1 cut(s)	490
EcoRII	CCWGG	6 cut(s)	439, 711, 924, 1348, 1435, 1455
EcoT38I	GRGCYC	1 cut(s)	1137
FaeI	CATG	3 cut(s)	289, 431, 995
FalI	AAGNNNNNCTT	2 cut(s)	453, 485
FaqI	GGGAC	1 cut(s)	1268
FatI	CATG	3 cut(s)	285, 427, 991
FauI	CCCGC	1 cut(s)	580
FauNDI	CATATG	1 cut(s)	1401
FokI	GGATG	2 cut(s)	1144, 1453
FriOI	GRGCYC	1 cut(s)	1137
FspBI	CTAG	5 cut(s)	389, 717, 762, 1130, 1409
GlaI	GCGC	3 cut(s)	126, 153, 284
HaeIII	GGCC	8 cut(s)	45, 69, 84, 89, 186, 681, 711, 1393
HapII	CCGG	9 cut(s)	66, 81, 86, 187, 199, 290, 298, 418, 910
HgaI	GACGC	1 cut(s)	881
HhaI	GCGC	3 cut(s)	127, 154, 285
Hin1II	CATG	3 cut(s)	289, 431, 995
Hin6I	GCGC	3 cut(s)	125, 152, 283
HinP1I	GCGC	3 cut(s)	125, 152, 283
HincII	GTYRAC	2 cut(s)	175, 907
HindII	GTYRAC	2 cut(s)	175, 907
HindIII	AAGCTT	2 cut(s)	434, 864
HpaII	CCGG	9 cut(s)	66, 81, 86, 187, 199, 290, 298, 418, 910
HphI	GGTGA	2 cut(s)	257, 1157
Hpy166II	GTNNAC	4 cut(s)	175, 907, 1046, 1187
Hpy188I	TCNGA	4 cut(s)	13, 112, 474, 1370
Hpy188III	TCNNGA	5 cut(s)	410, 948, 1124, 1172, 1253
Hpy8I	GTNNAC	4 cut(s)	175, 907, 1046, 1187
Hpy99I	CGWCG	3 cut(s)	65, 125, 875
HpyAV	CCTTC	5 cut(s)	127, 235, 272, 624, 1368
HpyCH4III	ACNGT	3 cut(s)	208, 791, 1050
HpyCH4V	TGCA	8 cut(s)	431, 786, 878, 935, 989, 1001, 1208, 1444
HpyF3I	CTNAG	5 cut(s)	10, 567, 687, 901, 1021
Hsp92II	CATG	3 cut(s)	289, 431, 995
HspAI	GCGC	3 cut(s)	125, 152, 283
KroI	GCCGGC	1 cut(s)	65
KroNI	GCCGGC	1 cut(s)	67
Kzo9I	GATC	4 cut(s)	102, 559, 563, 1365
LguI	GCTCTTC	1 cut(s)	185
LmnI	GCTCC	3 cut(s)	328, 840, 1355
Lsp1109I	GCAGC	5 cut(s)	240, 632, 655, 862, 1220
LweI	GCATC	2 cut(s)	1166, 1431
MaeI	CTAG	5 cut(s)	389, 717, 762, 1130, 1409
MaeIII	GTNAC	3 cut(s)	215, 1067, 1322
MalI	GATC	4 cut(s)	104, 561, 565, 1367
MboI	GATC	4 cut(s)	102, 559, 563, 1365
MhlI	GDGCHC	1 cut(s)	1137
MlsI	TGGCCA	1 cut(s)	681
MluCI	AATT	9 cut(s)	490, 499, 586, 653, 796, 803, 894, 951, 1015
MluNI	TGGCCA	1 cut(s)	681
MlyI	GAGTC	8 cut(s)	2, 27, 107, 635, 679, 907, 1223, 1254
MmeI	TCCRAC	4 cut(s)	117, 135, 156, 550
Mox20I	TGGCCA	1 cut(s)	681
MroNI	GCCGGC	1 cut(s)	65
MroXI	GAANNNNTTC	2 cut(s)	194, 468
MscI	TGGCCA	1 cut(s)	681
MseI	TTAA	5 cut(s)	366, 777, 858, 893, 1034
MslI	CAYNNNNRTG	1 cut(s)	290
Msp20I	TGGCCA	1 cut(s)	681
MspI	CCGG	9 cut(s)	66, 81, 86, 187, 199, 290, 298, 418, 910
MspR9I	CCNGG	7 cut(s)	86, 441, 713, 926, 1350, 1437, 1457
MvaI	CCWGG	6 cut(s)	441, 713, 926, 1350, 1437, 1457
MvnI	CGCG	3 cut(s)	125, 152, 283
NaeI	GCCGGC	1 cut(s)	67
NciI	CCSGG	1 cut(s)	86
NdeI	CATATG	1 cut(s)	1401
NdeII	GATC	4 cut(s)	102, 559, 563, 1365
NgoMIV	GCCGGC	1 cut(s)	65
NlaIII	CATG	3 cut(s)	289, 431, 995
NlaIV	GGNNCC	2 cut(s)	70, 1394
NmuCI	GTSAC	3 cut(s)	215, 1067, 1322
NspI	RCATGY	2 cut(s)	289, 431
PaeI	GCATGC	1 cut(s)	289
PciSI	GCTCTTC	1 cut(s)	185
PcsI	WCGNNNNNNNCGW	1 cut(s)	867
PdiI	GCCGGC	1 cut(s)	67
PdmI	GAANNNNTTC	2 cut(s)	194, 468
PfeI	GAWTC	3 cut(s)	478, 848, 1078
PflFI	GACNNNGTC	1 cut(s)	1280
PflMI	CCANNNNNTGG	1 cut(s)	1259
PfoI	TCCNGGA	1 cut(s)	439
PleI	GAGTC	8 cut(s)	2, 26, 107, 634, 679, 907, 1222, 1253
PpsI	GAGTC	8 cut(s)	2, 26, 107, 634, 679, 907, 1222, 1253
PsiI	TTATAA	1 cut(s)	608
Psp6I	CCWGG	6 cut(s)	439, 711, 924, 1348, 1435, 1455
PspGI	CCWGG	6 cut(s)	439, 711, 924, 1348, 1435, 1455
PspN4I	GGNNCC	2 cut(s)	70, 1394
PspPI	GGNCC	6 cut(s)	68, 83, 184, 407, 443, 1392
PstI	CTGCAG	1 cut(s)	880
PstNI	CAGNNNCTG	2 cut(s)	234, 629
PsyI	GACNNNGTC	1 cut(s)	1280
RsaI	GTAC	4 cut(s)	314, 383, 497, 813
RsaNI	GTAC	4 cut(s)	313, 382, 496, 812
RseI	CAYNNNNRTG	1 cut(s)	290
SapI	GCTCTTC	1 cut(s)	185
SaqAI	TTAA	5 cut(s)	366, 777, 858, 893, 1034
Sau3AI	GATC	4 cut(s)	102, 559, 563, 1365
Sau96I	GGNCC	6 cut(s)	68, 83, 184, 407, 443, 1392
SchI	GAGTC	8 cut(s)	2, 27, 107, 635, 679, 907, 1223, 1254
ScrFI	CCNGG	7 cut(s)	86, 441, 713, 926, 1350, 1437, 1457
SduI	GDGCHC	1 cut(s)	1137
SfaNI	GCATC	2 cut(s)	1166, 1431
SfcI	CTRYAG	1 cut(s)	876
SinI	GGWCC	2 cut(s)	407, 443
SmiMI	CAYNNNNRTG	1 cut(s)	290
SmlI	CTYRAG	3 cut(s)	750, 1072, 1172
SmoI	CTYRAG	3 cut(s)	750, 1072, 1172
SphI	GCATGC	1 cut(s)	289
Sse9I	AATT	9 cut(s)	490, 499, 586, 653, 796, 803, 894, 951, 1015
SsiI	CCGC	8 cut(s)	42, 57, 144, 147, 150, 255, 573, 735
SspMI	CTAG	5 cut(s)	389, 717, 762, 1130, 1409
StyD4I	CCNGG	7 cut(s)	84, 439, 711, 924, 1348, 1435, 1455
TaaI	ACNGT	3 cut(s)	208, 791, 1050
TaqI	TCGA	7 cut(s)	30, 36, 48, 512, 562, 870, 916
TasI	AATT	9 cut(s)	490, 499, 586, 653, 796, 803, 894, 951, 1015
TatI	WGTACW	1 cut(s)	381
TauI	GCSGC	6 cut(s)	45, 146, 149, 152, 258, 737
TfiI	GAWTC	3 cut(s)	478, 848, 1078
Tru1I	TTAA	5 cut(s)	366, 777, 858, 893, 1034
Tru9I	TTAA	5 cut(s)	366, 777, 858, 893, 1034
TscAI	CASTG	2 cut(s)	224, 1107
TseFI	GTSAC	3 cut(s)	215, 1067, 1322
TseI	GCWGC	5 cut(s)	228, 620, 643, 875, 1208
Tsp45I	GTSAC	3 cut(s)	215, 1067, 1322
TspDTI	ATGAA	4 cut(s)	254, 579, 861, 1314
TspGWI	ACGGA	4 cut(s)	296, 547, 799, 1129
TspRI	CASTG	2 cut(s)	224, 1107
Tth111I	GACNNNGTC	1 cut(s)	1280
Van91I	CCANNNNNTGG	1 cut(s)	1259
VpaK11BI	GGWCC	2 cut(s)	407, 443
XapI	RAATTY	2 cut(s)	490, 796
XceI	RCATGY	2 cut(s)	289, 431
XcmI	CCANNNNNNNNNTGG	2 cut(s)	533, 1349
XmnI	GAANNNNTTC	2 cut(s)	194, 468
XspI	CTAG	5 cut(s)	389, 717, 762, 1130, 1409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.