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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g13150 FvH4_3g13150 |
| malus_domestica | MD05G1244600.v1.1 |
| prunus_persica | Prupe.4G119000_v2.0.a1 |
| pyrus_communis | pycom05g22110 |
| rosa_chinensis | RchiOBHm_Chr5g0021391 |
| rosa_laevigata | RLG00000032609 |
| rosa_roxburghii | Rroxscaffold_1G00057150 |
| rosa_rugosa | Rorug05G0066900 |
| rosa_samantha | Rh5AG156000 Rh5BG155500 Rh5CG169200 Rh5DG156000 |
| rosa_wichuraiana | Rw5G013890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 162 |
| AciI | CCGC | 2 cut(s) | 216, 346 |
| AclWI | GGATC | 1 cut(s) | 735 |
| AcsI | RAATTY | 1 cut(s) | 27 |
| AcyI | GRCGYC | 1 cut(s) | 159 |
| AgsI | TTSAA | 6 cut(s) | 96, 108, 412, 448, 550, 661 |
| AjnI | CCWGG | 1 cut(s) | 463 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 653, 685 |
| AluBI | AGCT | 1 cut(s) | 744 |
| AluI | AGCT | 1 cut(s) | 744 |
| Alw26I | GTCTC | 1 cut(s) | 415 |
| AlwI | GGATC | 1 cut(s) | 735 |
| AoxI | GGCC | 3 cut(s) | 315, 461, 666 |
| ApoI | RAATTY | 1 cut(s) | 27 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 19, 51 |
| AspS9I | GGNCC | 1 cut(s) | 316 |
| AsuC2I | CCSGG | 1 cut(s) | 588 |
| AsuHPI | GGTGA | 4 cut(s) | 108, 220, 376, 701 |
| BccI | CCATC | 7 cut(s) | 62, 239, 287, 378, 389, 448, 680 |
| BciT130I | CCWGG | 1 cut(s) | 465 |
| BcnI | CCSGG | 1 cut(s) | 588 |
| BcoDI | GTCTC | 1 cut(s) | 415 |
| BfaI | CTAG | 1 cut(s) | 636 |
| Bme1390I | CCNGG | 2 cut(s) | 465, 588 |
| BmgT120I | GGNCC | 1 cut(s) | 316 |
| BmiI | GGNNCC | 1 cut(s) | 469 |
| BmrFI | CCNGG | 2 cut(s) | 465, 588 |
| BoxI | GACNNNNGTC | 1 cut(s) | 325 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 420, 452 |
| BpuEI | CTTGAG | 2 cut(s) | 422, 560 |
| BpuMI | CCSGG | 1 cut(s) | 588 |
| BsaHI | GRCGYC | 1 cut(s) | 159 |
| BsaI | GGTCTC | 1 cut(s) | 415 |
| BsaJI | CCNNGG | 2 cut(s) | 587, 669 |
| Bse1I | ACTGG | 1 cut(s) | 455 |
| Bse3DI | GCAATG | 3 cut(s) | 99, 396, 570 |
| BseBI | CCWGG | 1 cut(s) | 465 |
| BseDI | CCNNGG | 2 cut(s) | 587, 669 |
| BseGI | GGATG | 4 cut(s) | 279, 285, 459, 691 |
| BseMI | GCAATG | 3 cut(s) | 99, 396, 570 |
| BseMII | CTCAG | 2 cut(s) | 213, 687 |
| BseNI | ACTGG | 1 cut(s) | 455 |
| BseRI | GAGGAG | 4 cut(s) | 73, 167, 170, 233 |
| BshFI | GGCC | 3 cut(s) | 317, 463, 668 |
| BsiSI | CCGG | 1 cut(s) | 587 |
| BsmAI | GTCTC | 1 cut(s) | 415 |
| BsnI | GGCC | 3 cut(s) | 317, 463, 668 |
| Bso31I | GGTCTC | 1 cut(s) | 415 |
| Bsp143I | GATC | 1 cut(s) | 727 |
| BspACI | CCGC | 2 cut(s) | 216, 346 |
| BspANI | GGCC | 3 cut(s) | 317, 463, 668 |
| BspCNI | CTCAG | 2 cut(s) | 212, 688 |
| BspLI | GGNNCC | 1 cut(s) | 469 |
| BspPI | GGATC | 1 cut(s) | 735 |
| BspTNI | GGTCTC | 1 cut(s) | 415 |
| BsrDI | GCAATG | 3 cut(s) | 99, 396, 570 |
| BsrI | ACTGG | 1 cut(s) | 455 |
| BssECI | CCNNGG | 2 cut(s) | 587, 669 |
| BssMI | GATC | 1 cut(s) | 727 |
| BssNI | GRCGYC | 1 cut(s) | 159 |
| BssT1I | CCWWGG | 1 cut(s) | 669 |
| Bst2UI | CCWGG | 1 cut(s) | 465 |
| Bst6I | CTCTTC | 2 cut(s) | 91, 413 |
| BstACI | GRCGYC | 1 cut(s) | 159 |
| BstDEI | CTNAG | 2 cut(s) | 199, 696 |
| BstF5I | GGATG | 4 cut(s) | 279, 285, 459, 691 |
| BstKTI | GATC | 1 cut(s) | 730 |
| BstMAI | GTCTC | 1 cut(s) | 415 |
| BstMBI | GATC | 1 cut(s) | 727 |
| BstNI | CCWGG | 1 cut(s) | 465 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 325 |
| BstSCI | CCNGG | 2 cut(s) | 463, 586 |
| BsuRI | GGCC | 3 cut(s) | 317, 463, 668 |
| BtsCI | GGATG | 4 cut(s) | 279, 285, 459, 691 |
| Cfr13I | GGNCC | 1 cut(s) | 316 |
| CviAII | CATG | 3 cut(s) | 313, 325, 391 |
| CviJI | RGCY | 9 cut(s) | 239, 317, 463, 468, 545, 635, 668, 719, 744 |
| CviKI_1 | RGCY | 9 cut(s) | 239, 317, 463, 468, 545, 635, 668, 719, 744 |
| DdeI | CTNAG | 2 cut(s) | 199, 696 |
| DpnI | GATC | 1 cut(s) | 729 |
| DpnII | GATC | 1 cut(s) | 727 |
| Eam1104I | CTCTTC | 2 cut(s) | 91, 413 |
| EarI | CTCTTC | 2 cut(s) | 91, 413 |
| EciI | GGCGGA | 1 cut(s) | 335 |
| Eco130I | CCWWGG | 1 cut(s) | 669 |
| Eco147I | AGGCCT | 2 cut(s) | 463, 668 |
| Eco31I | GGTCTC | 1 cut(s) | 415 |
| EcoRII | CCWGG | 1 cut(s) | 463 |
| EcoT14I | CCWWGG | 1 cut(s) | 669 |
| ErhI | CCWWGG | 1 cut(s) | 669 |
| FaeI | CATG | 3 cut(s) | 316, 328, 394 |
| FaiI | YATR | 7 cut(s) | 15, 314, 326, 392, 615, 732, 734 |
| FatI | CATG | 3 cut(s) | 312, 324, 390 |
| FauNDI | CATATG | 1 cut(s) | 732 |
| FokI | GGATG | 4 cut(s) | 266, 272, 466, 698 |
| FspBI | CTAG | 1 cut(s) | 636 |
| HaeIII | GGCC | 3 cut(s) | 317, 463, 668 |
| HapII | CCGG | 1 cut(s) | 587 |
| Hin1I | GRCGYC | 1 cut(s) | 159 |
| Hin1II | CATG | 3 cut(s) | 316, 328, 394 |
| HinfI | GANTC | 2 cut(s) | 342, 692 |
| HpaII | CCGG | 1 cut(s) | 587 |
| HphI | GGTGA | 4 cut(s) | 108, 220, 376, 701 |
| Hpy188I | TCNGA | 4 cut(s) | 147, 202, 336, 697 |
| HpyAV | CCTTC | 3 cut(s) | 88, 304, 369 |
| HpyCH4IV | ACGT | 1 cut(s) | 159 |
| HpyF3I | CTNAG | 2 cut(s) | 199, 696 |
| HpySE526I | ACGT | 1 cut(s) | 159 |
| Hsp92I | GRCGYC | 1 cut(s) | 159 |
| Hsp92II | CATG | 3 cut(s) | 316, 328, 394 |
| Kzo9I | GATC | 1 cut(s) | 727 |
| LmnI | GCTCC | 1 cut(s) | 473 |
| LpnPI | CCDG | 9 cut(s) | 21, 436, 439, 445, 450, 477, 486, 600, 730 |
| MaeI | CTAG | 1 cut(s) | 636 |
| MaeII | ACGT | 1 cut(s) | 159 |
| MaeIII | GTNAC | 2 cut(s) | 160, 327 |
| MalI | GATC | 1 cut(s) | 729 |
| MboI | GATC | 1 cut(s) | 727 |
| MboII | GAAGA | 4 cut(s) | 78, 81, 84, 430 |
| MluCI | AATT | 1 cut(s) | 27 |
| MlyI | GAGTC | 2 cut(s) | 336, 701 |
| MseI | TTAA | 1 cut(s) | 642 |
| MslI | CAYNNNNRTG | 1 cut(s) | 389 |
| MspI | CCGG | 1 cut(s) | 587 |
| MspR9I | CCNGG | 2 cut(s) | 465, 588 |
| MvaI | CCWGG | 1 cut(s) | 465 |
| NciI | CCSGG | 1 cut(s) | 588 |
| NdeI | CATATG | 1 cut(s) | 732 |
| NdeII | GATC | 1 cut(s) | 727 |
| NlaIII | CATG | 3 cut(s) | 316, 328, 394 |
| NlaIV | GGNNCC | 1 cut(s) | 469 |
| NmuCI | GTSAC | 2 cut(s) | 160, 327 |
| PceI | AGGCCT | 2 cut(s) | 463, 668 |
| PleI | GAGTC | 2 cut(s) | 336, 700 |
| PpsI | GAGTC | 2 cut(s) | 336, 700 |
| PshAI | GACNNNNGTC | 1 cut(s) | 325 |
| Psp6I | CCWGG | 1 cut(s) | 463 |
| PspGI | CCWGG | 1 cut(s) | 463 |
| PspN4I | GGNNCC | 1 cut(s) | 469 |
| PspPI | GGNCC | 1 cut(s) | 316 |
| RseI | CAYNNNNRTG | 1 cut(s) | 389 |
| SaqAI | TTAA | 1 cut(s) | 642 |
| Sau3AI | GATC | 1 cut(s) | 727 |
| Sau96I | GGNCC | 1 cut(s) | 316 |
| SchI | GAGTC | 2 cut(s) | 336, 701 |
| ScrFI | CCNGG | 2 cut(s) | 465, 588 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 389 |
| SmlI | CTYRAG | 2 cut(s) | 437, 539 |
| SmoI | CTYRAG | 2 cut(s) | 437, 539 |
| Sse9I | AATT | 1 cut(s) | 27 |
| SseBI | AGGCCT | 2 cut(s) | 463, 668 |
| SsiI | CCGC | 2 cut(s) | 216, 346 |
| SspMI | CTAG | 1 cut(s) | 636 |
| StuI | AGGCCT | 2 cut(s) | 463, 668 |
| StyD4I | CCNGG | 2 cut(s) | 463, 586 |
| StyI | CCWWGG | 1 cut(s) | 669 |
| TaiI | ACGT | 1 cut(s) | 162 |
| TasI | AATT | 1 cut(s) | 27 |
| Tru1I | TTAA | 1 cut(s) | 642 |
| Tru9I | TTAA | 1 cut(s) | 642 |
| TseFI | GTSAC | 2 cut(s) | 160, 327 |
| Tsp45I | GTSAC | 2 cut(s) | 160, 327 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XapI | RAATTY | 1 cut(s) | 27 |
| XspI | CTAG | 1 cut(s) | 636 |
| ZraI | GACGTC | 1 cut(s) | 160 |