No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g13150 FvH4_3g13150 |
| malus_domestica | MD05G1244600.v1.1 |
| prunus_persica | Prupe.4G119000_v2.0.a1 |
| pyrus_communis | pycom05g22110 |
| rosa_chinensis | RchiOBHm_Chr5g0021391 |
| rosa_laevigata | RLG00000032609 |
| rosa_roxburghii | Rroxscaffold_1G00057150 |
| rosa_rugosa | Rorug05G0066900 |
| rosa_samantha | Rh5AG156000 Rh5BG155500 Rh5CG169200 Rh5DG156000 |
| rosa_wichuraiana | Rw5G013890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 667 |
| AciI | CCGC | 1 cut(s) | 213 |
| AclWI | GGATC | 1 cut(s) | 654 |
| AcsI | RAATTY | 1 cut(s) | 27 |
| AgsI | TTSAA | 5 cut(s) | 90, 102, 355, 457, 568 |
| AjnI | CCWGG | 2 cut(s) | 204, 370 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 560, 592 |
| AluBI | AGCT | 1 cut(s) | 349 |
| AluI | AGCT | 1 cut(s) | 349 |
| Alw26I | GTCTC | 2 cut(s) | 46, 322 |
| AlwI | GGATC | 1 cut(s) | 654 |
| AoxI | GGCC | 4 cut(s) | 312, 317, 339, 368 |
| ApoI | RAATTY | 1 cut(s) | 27 |
| AspS9I | GGNCC | 3 cut(s) | 313, 318, 340 |
| AsuC2I | CCSGG | 2 cut(s) | 316, 495 |
| AsuHPI | GGTGA | 3 cut(s) | 102, 217, 376 |
| BbsI | GAAGAC | 1 cut(s) | 159 |
| BccI | CCATC | 4 cut(s) | 62, 236, 355, 433 |
| BciT130I | CCWGG | 2 cut(s) | 206, 372 |
| BcnI | CCSGG | 2 cut(s) | 316, 495 |
| BcoDI | GTCTC | 2 cut(s) | 46, 322 |
| BfaI | CTAG | 1 cut(s) | 543 |
| BfuAI | ACCTGC | 1 cut(s) | 667 |
| Bme1390I | CCNGG | 4 cut(s) | 206, 316, 372, 495 |
| BmgT120I | GGNCC | 3 cut(s) | 313, 318, 340 |
| BmiI | GGNNCC | 1 cut(s) | 376 |
| BmrFI | CCNGG | 4 cut(s) | 206, 316, 372, 495 |
| BmrI | ACTGGG | 1 cut(s) | 374 |
| BmuI | ACTGGG | 1 cut(s) | 374 |
| BpiI | GAAGAC | 1 cut(s) | 159 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 327, 359 |
| BpuEI | CTTGAG | 2 cut(s) | 329, 467 |
| BpuMI | CCSGG | 2 cut(s) | 316, 495 |
| BsaI | GGTCTC | 1 cut(s) | 322 |
| Bse1I | ACTGG | 2 cut(s) | 362, 380 |
| Bse3DI | GCAATG | 1 cut(s) | 477 |
| BseBI | CCWGG | 2 cut(s) | 206, 372 |
| BseGI | GGATG | 4 cut(s) | 282, 366, 444, 503 |
| BseMI | GCAATG | 1 cut(s) | 477 |
| BseMII | CTCAG | 1 cut(s) | 606 |
| BseNI | ACTGG | 2 cut(s) | 362, 380 |
| BseRI | GAGGAG | 4 cut(s) | 70, 164, 167, 230 |
| BshFI | GGCC | 4 cut(s) | 314, 319, 341, 370 |
| BsiSI | CCGG | 2 cut(s) | 316, 494 |
| BsmAI | GTCTC | 2 cut(s) | 46, 322 |
| BsmBI | CGTCTC | 1 cut(s) | 46 |
| BsnI | GGCC | 4 cut(s) | 314, 319, 341, 370 |
| Bso31I | GGTCTC | 1 cut(s) | 322 |
| Bsp143I | GATC | 1 cut(s) | 646 |
| BspACI | CCGC | 1 cut(s) | 213 |
| BspANI | GGCC | 4 cut(s) | 314, 319, 341, 370 |
| BspCNI | CTCAG | 1 cut(s) | 607 |
| BspLI | GGNNCC | 1 cut(s) | 376 |
| BspMI | ACCTGC | 1 cut(s) | 667 |
| BspPI | GGATC | 1 cut(s) | 654 |
| BspTNI | GGTCTC | 1 cut(s) | 322 |
| BsrDI | GCAATG | 1 cut(s) | 477 |
| BsrI | ACTGG | 2 cut(s) | 362, 380 |
| BssMI | GATC | 1 cut(s) | 646 |
| Bst2UI | CCWGG | 2 cut(s) | 206, 372 |
| Bst4CI | ACNGT | 1 cut(s) | 709 |
| Bst6I | CTCTTC | 1 cut(s) | 88 |
| BstDEI | CTNAG | 1 cut(s) | 615 |
| BstF5I | GGATG | 4 cut(s) | 282, 366, 444, 503 |
| BstKTI | GATC | 1 cut(s) | 649 |
| BstMAI | GTCTC | 2 cut(s) | 46, 322 |
| BstMBI | GATC | 1 cut(s) | 646 |
| BstNI | CCWGG | 2 cut(s) | 206, 372 |
| BstSCI | CCNGG | 4 cut(s) | 204, 314, 370, 493 |
| BstV2I | GAAGAC | 1 cut(s) | 159 |
| BsuRI | GGCC | 4 cut(s) | 314, 319, 341, 370 |
| BtsCI | GGATG | 4 cut(s) | 282, 366, 444, 503 |
| BveI | ACCTGC | 1 cut(s) | 667 |
| Cfr13I | GGNCC | 3 cut(s) | 313, 318, 340 |
| CviAII | CATG | 1 cut(s) | 310 |
| DdeI | CTNAG | 1 cut(s) | 615 |
| DpnI | GATC | 1 cut(s) | 648 |
| DpnII | GATC | 1 cut(s) | 646 |
| Eam1104I | CTCTTC | 1 cut(s) | 88 |
| EarI | CTCTTC | 1 cut(s) | 88 |
| Eco147I | AGGCCT | 1 cut(s) | 370 |
| Eco31I | GGTCTC | 1 cut(s) | 322 |
| EcoO109I | RGGNCCY | 1 cut(s) | 340 |
| EcoRII | CCWGG | 2 cut(s) | 204, 370 |
| Esp3I | CGTCTC | 1 cut(s) | 46 |
| FaeI | CATG | 1 cut(s) | 313 |
| FaiI | YATR | 9 cut(s) | 161, 311, 323, 522, 651, 653, 682, 684, 714 |
| FatI | CATG | 1 cut(s) | 309 |
| FauNDI | CATATG | 1 cut(s) | 651 |
| FokI | GGATG | 4 cut(s) | 269, 373, 451, 510 |
| FspBI | CTAG | 1 cut(s) | 543 |
| HaeIII | GGCC | 4 cut(s) | 314, 319, 341, 370 |
| HapII | CCGG | 2 cut(s) | 316, 494 |
| Hin1II | CATG | 1 cut(s) | 313 |
| HinfI | GANTC | 1 cut(s) | 98 |
| HpaII | CCGG | 2 cut(s) | 316, 494 |
| HphI | GGTGA | 3 cut(s) | 102, 217, 376 |
| Hpy166II | GTNNAC | 1 cut(s) | 665 |
| Hpy188I | TCNGA | 1 cut(s) | 616 |
| Hpy188III | TCNNGA | 1 cut(s) | 13 |
| Hpy8I | GTNNAC | 1 cut(s) | 665 |
| HpyAV | CCTTC | 2 cut(s) | 85, 622 |
| HpyCH4III | ACNGT | 1 cut(s) | 709 |
| HpyF3I | CTNAG | 1 cut(s) | 615 |
| Hsp92II | CATG | 1 cut(s) | 313 |
| Kzo9I | GATC | 1 cut(s) | 646 |
| LmnI | GCTCC | 1 cut(s) | 380 |
| MaeI | CTAG | 1 cut(s) | 543 |
| MaeIII | GTNAC | 1 cut(s) | 703 |
| MalI | GATC | 1 cut(s) | 648 |
| MboI | GATC | 1 cut(s) | 646 |
| MboII | GAAGA | 3 cut(s) | 75, 78, 164 |
| MluCI | AATT | 3 cut(s) | 27, 69, 502 |
| MseI | TTAA | 1 cut(s) | 689 |
| MspI | CCGG | 2 cut(s) | 316, 494 |
| MspR9I | CCNGG | 4 cut(s) | 206, 316, 372, 495 |
| MvaI | CCWGG | 2 cut(s) | 206, 372 |
| NciI | CCSGG | 2 cut(s) | 316, 495 |
| NdeI | CATATG | 1 cut(s) | 651 |
| NdeII | GATC | 1 cut(s) | 646 |
| NlaIII | CATG | 1 cut(s) | 313 |
| NlaIV | GGNNCC | 1 cut(s) | 376 |
| PceI | AGGCCT | 1 cut(s) | 370 |
| PfeI | GAWTC | 1 cut(s) | 98 |
| PfoI | TCCNGGA | 1 cut(s) | 493 |
| Psp6I | CCWGG | 2 cut(s) | 204, 370 |
| PspGI | CCWGG | 2 cut(s) | 204, 370 |
| PspN4I | GGNNCC | 1 cut(s) | 376 |
| PspPI | GGNCC | 3 cut(s) | 313, 318, 340 |
| SaqAI | TTAA | 1 cut(s) | 689 |
| Sau3AI | GATC | 1 cut(s) | 646 |
| Sau96I | GGNCC | 3 cut(s) | 313, 318, 340 |
| ScrFI | CCNGG | 4 cut(s) | 206, 316, 372, 495 |
| SetI | ASST | 9 cut(s) | 159, 174, 207, 225, 256, 351, 607, 633, 681 |
| SmlI | CTYRAG | 2 cut(s) | 344, 446 |
| SmoI | CTYRAG | 2 cut(s) | 344, 446 |
| Sse9I | AATT | 3 cut(s) | 27, 69, 502 |
| SseBI | AGGCCT | 1 cut(s) | 370 |
| SsiI | CCGC | 1 cut(s) | 213 |
| SspMI | CTAG | 1 cut(s) | 543 |
| StuI | AGGCCT | 1 cut(s) | 370 |
| StyD4I | CCNGG | 4 cut(s) | 204, 314, 370, 493 |
| TaaI | ACNGT | 1 cut(s) | 709 |
| TasI | AATT | 3 cut(s) | 27, 69, 502 |
| TfiI | GAWTC | 1 cut(s) | 98 |
| Tru1I | TTAA | 1 cut(s) | 689 |
| Tru9I | TTAA | 1 cut(s) | 689 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XapI | RAATTY | 1 cut(s) | 27 |
| XspI | CTAG | 1 cut(s) | 543 |