Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0008771

Physical Location & Seq

Genomic Coordinates Forward (+)

7986195 .. 7992725

Gene Structure 6531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g13360.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGGAAGCTTTCGGCGGATTCTTGGTGGACGAGAAGGCGGTCCGGGTCGAGAACATCTTCTTGGACTTCCTCAAAAGCTTCCGACTCGGCGGCGAAGGCGAGCTCTATTACGAGGCCGAGATCGAAGCCATGATCAACAACGAGTCCACCACCATGTTCATCGACTTCTCTCACGTCATGACCTTCAACAATCTCCTCCAGAAGGCCATTTCCGACGAGTTCTTGAGGTTCGAGCCGTATTTGAGGAACGCGTGCAAGAGATTCGTGATGGAGCGGCGGTCCAATGCGATGCAGGATGATGTTAACAAGGACATCAATGTGGCCTTCTTCAATCTTCCGGCGTCGAAGAGGTTGAGGGAATTGACGACAGCCGAAATAGGGAAACTGGTGTCGGTGAAAGGAGTGGTGACTCGGACGAGTGAGGTCCGGCCTGAGCTTCTCCAGGGGACTTTTAAGTGCTTGGAATGCGGAGGTGTCATCAAGAATGTTGAACAGCAGTATAAGTACACTGAGCCGACGATTTGTGTCAATGCCACTTGCGCAAATAGAGCAAGGTGGGCATTGCTTCGGCAAGAGAGCAAATTTGCGGATTGGCAGAGGGTGCGAATGCAGGAGACTTCCAAGGAGATACCCGCGGGCTCCCTTCCCAGGTCGCTGGATGTTATAATCCGCCATGAGATCGTTGAGAAGGCCAGGGCTGGTGACACGGTTATATTCACTGGCACAGTGGTTGTGATACCAGACATATTGGCTTTGTCTGCCCCCGGAGAGAGATCAGAAGTTTCGCGCCAAGCTTCCCAGCGTAGTAATGGTGCAGCTGGGCATGAAGGAGTCAGGGGTCTCCGAGCATTAGGAGTGAGAGACCTCTCATACCGCCTGGCCTTCATCGCAAATTCAGTTCAGATTTCTGATGGCAGGCAGGATACTGACATTCGGAATAGAAAGAAGGATGCTGAAGATGATGACAACCAGCAGTTCACTGCAGAAGAGCAAGATGAAGTTCAAAGAATGAGGAATACTCCTGATTTCTTCAATAAGATTGTTGATAGCATTGCCCCAACCGTGTTTGGCCACCAAGATATCAAGAGAGCAATCCTGCTTATGCTCCTGGGTGGTGTCCACAAGTTTACTCATGAAGGTATCAACCTGAGAGGAGATATCAATGTATGTATAGTCGGGGACCCCAGTTGTGCAAAATCTCAGTTCCTCAAGTATGCTGCTGGGATAGTTCCAAGATCTGTTTACACATCCGGGAAATCCTCCTCTGCTGCTGGTTTAACTGCTACTGTGGCCAAAGAACCAGAAACTGGGGAGTTTTGTATTGAGGCTGGTGCATTAATGCTCGCTGACAATGGCATTTGTTGCATTGATGAATTTGACAAGATGGATGTTAGGGATCAGGTTGCAATTCATGAGGCAATGGAACAGCAGACGATAAGCATTACAAAAGCAGGAATACAGGCAACACTGAATGCTCGAACATCGATTCTTGCTGCTGCGAACCCCACAGGGGGCCGTTATGATAAATCTAAACCTCTAAAGTATAACGTGGCTCTTCCTCCTCCTATTTTATCAAGGTTTGATCTGGTATATGTCATGATTGATGACCCAGATGATCAAACTGATTACCACATAGCCCACCATATTGTAAGAGTACATCAAAAACGGGAAGAGGCACTCAGTCCTACATTCACTACTGCACAGCTGAAGCGGTATATTACATATGCCAAAACTCTGAAACCAAAGTTAAATTCAGATGCTAGAAAGCTGTTGGTGGACTCTTATGTTGCTCTCAGAAGAGGTGATACTGCTCCTGGTGGTAGAGTTGCTTATCGCATGACAGTTAGGCAACTAGAGGCATTAATCAGATTGTCAGAGGCCATTGCTCGAAGTTATTTAGAGCTTCAGGTTAAACCACACCATGTCCGTTTAGCAGTGAGATTGCTGAAAACCTCAATAATTAGTGTCGAGTCTAGTGAGATTGATCTATCAGAGTTTGAAGACTCTCATGACAATGTTGAGGGCAATGACAATGGAAATAATGGTACTGATCACGTTGATGATAATGGAAATAATGGTACTGGTCCAGGTGATGATCAAACAACCAATGGCAGAGCTTCTGTGAACGGCGAAGGTGGGGCTGCAAATCAACAGGGAAAGAAGCTTATAATAAGTGATGAATATTTTCAGAGAGTTACCCAGGCCCTTATCATGCGTCTGAGACAGCACGAAGAAGATGTTAGACAAAGTGGGACAGGGCTGGCTGGAATGAGGCAGAGGGACTTGATTCAGTGGTATGTGAGTCAGCAGAACGAGAAAAATAATTATGATTTTGTGGAGGAAGCAGCTGCTGAAATTTCTAAAATCAAAGCTATCATAGAGAGCTTAATAAGAAGAGAAGGGCATCTGATAGTCCTAGATGATGAGAGGCAAGCAGCAGATGGTGAAGGACCACCACAGCCACCAGTATCCAGAAATGACAGAATATTGGCCGTGGCTCCTAACTATGTCATTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0051276 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

840

Amino Acids

93.48

Weight (kDa)

5.74

Isoelectric Point (pI)

39.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_N	PF14551	18 - 111	1e-17	MCM N-terminal domain
MCM_OB	PF17207	118 - 246	8.2e-41	MCM OB domain
MCM	PF00493	331 - 553	2.7e-102	MCM P-loop domain
Mg_chelatase	PF01078	440 - 530	1.7e-06	Magnesium chelatase, subunit ChlI
MCM_lid	PF17855	568 - 653	6e-23	MCM AAA-lid domain
WHD_MCM6	PF18263	720 - 794	1.5e-10	MCM6 C-terminal winged-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44635 AT5G44635
fragaria_vesca	FvH4_3g13360 FvH4_3g13360 FvH4_3g13360 FvH4_3g13360
malus_domestica	MD05G1242400.v1.1 MD10G1224200.v1.1
prunus_persica	Prupe.4G121000_v2.0.a1 Prupe.4G121000_v2.0.a1 Prupe.4G121000_v2.0.a1
pyrus_communis	pycom05g21890 pycom10g18820
rosa_chinensis	RchiOBHm_Chr5g0022071
rosa_laevigata	RLG00000032641
rosa_multiflora	Rmu_sc0006966.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056860
rosa_rugosa	Rorug05G0070900
rosa_samantha	Rh5AG158900 Rh5BG158200 Rh5CG172600 Rh5DG158400
rosa_wichuraiana	Rw5G014180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	665, 2168
Acc16I	TGCGCA	1 cut(s)	541
AccB7I	CCANNNNNTGG	1 cut(s)	1307
AccBSI	CCGCTC	1 cut(s)	274
AccII	CGCG	3 cut(s)	251, 635, 787
AclWI	GGATC	1 cut(s)	1404
AcoI	YGGCCR	3 cut(s)	1069, 1290, 2490
AcsI	RAATTY	5 cut(s)	581, 892, 1373, 1750, 2355
AcuI	CTGAAG	3 cut(s)	975, 1727, 1889
AcyI	GRCGYC	1 cut(s)	341
AfaI	GTAC	4 cut(s)	506, 1656, 2047, 2080
AfiI	CCNNNNNNNGG	6 cut(s)	202, 378, 648, 1307, 1510, 1511
AflIII	ACRYGT	1 cut(s)	249
AgsI	TTSAA	6 cut(s)	187, 331, 491, 1004, 1033, 2000
AjiI	CACGTC	1 cut(s)	175
AjnI	CCWGG	8 cut(s)	441, 647, 692, 876, 1107, 1813, 2086, 2199
AjuI	GAANNNNNNNTTGG	4 cut(s)	44, 76, 1735, 1767
Alw21I	GWGCWC	1 cut(s)	105
Alw26I	GTCTC	4 cut(s)	608, 845, 855, 2215
AlwI	GGATC	1 cut(s)	1404
AlwNI	CAGNNNCTG	2 cut(s)	1307, 2351
ApeKI	GCWGC	9 cut(s)	815, 1217, 1268, 1493, 1496, 2141, 2345, 2348, 2435
ApoI	RAATTY	5 cut(s)	581, 892, 1373, 1750, 2355
AseI	ATTAAT	2 cut(s)	1337, 1862
Asp700I	GAANNNNTTC	2 cut(s)	56, 2184
AspLEI	GCGC	2 cut(s)	542, 789
AspS9I	GGNCC	8 cut(s)	40, 279, 424, 1180, 1513, 2084, 2203, 2450
AsuC2I	CCSGG	3 cut(s)	44, 765, 1252
AsuHPI	GGTGA	6 cut(s)	406, 418, 713, 1814, 2102, 2456
AvaII	GGWCC	6 cut(s)	40, 279, 424, 1180, 2084, 2450
BalI	TGGCCA	2 cut(s)	1071, 1292
BanII	GRGCYC	2 cut(s)	105, 641
BarI	GAAGNNNNNNTAC	2 cut(s)	1789, 1821
BbsI	GAAGAC	1 cut(s)	2007
Bbv12I	GWGCWC	1 cut(s)	105
BbvI	GCAGC	9 cut(s)	827, 1204, 1255, 1480, 1483, 2128, 2335, 2357, 2447
BccI	CCATC	4 cut(s)	262, 905, 1378, 2435
BceAI	ACGGC	4 cut(s)	220, 1500, 2143, 2477
BcgI	CGANNNNNNTGC	2 cut(s)	244, 278
BciT130I	CCWGG	8 cut(s)	443, 649, 694, 878, 1109, 1815, 2088, 2201
BciVI	GTATCC	2 cut(s)	916, 2479
BclI	TGATCA	4 cut(s)	132, 1615, 2050, 2095
BcnI	CCSGG	3 cut(s)	44, 765, 1252
BcoDI	GTCTC	4 cut(s)	608, 845, 855, 2215
BfaI	CTAG	4 cut(s)	1761, 1853, 1974, 2417
BfmI	CTRYAG	1 cut(s)	981
BfuI	GTATCC	2 cut(s)	916, 2479
BglII	AGATCT	1 cut(s)	1235
Bme18I	GGWCC	6 cut(s)	40, 279, 424, 1180, 2084, 2450
BmgBI	CACGTC	1 cut(s)	175
BmgT120I	GGNCC	8 cut(s)	40, 279, 424, 1180, 1513, 2084, 2203, 2450
BmiI	GGNNCC	5 cut(s)	640, 1181, 1182, 1514, 2499
BmrI	ACTGGG	2 cut(s)	1179, 1317
BmsI	GCATC	4 cut(s)	279, 940, 1747, 2413
BmuI	ACTGGG	2 cut(s)	1179, 1317
BpiI	GAAGAC	1 cut(s)	2007
BplI	GAGNNNNNCTC	2 cut(s)	1003, 1035
BpmI	CTGGAG	2 cut(s)	182, 425
Bpu10I	CCTNAGC	1 cut(s)	432
BpuEI	CTTGAG	2 cut(s)	244, 1193
BpuMI	CCSGG	3 cut(s)	44, 765, 1252
Bsa29I	ATCGAT	1 cut(s)	1484
BsaHI	GRCGYC	1 cut(s)	341
BsaI	GGTCTC	2 cut(s)	845, 855
BsaJI	CCNNGG	9 cut(s)	442, 621, 633, 647, 693, 763, 1108, 2199, 2493
BsaXI	ACNNNNNCTCC	2 cut(s)	263, 293
Bsc4I	CCNNNNNNNGG	6 cut(s)	202, 378, 648, 1307, 1510, 1511
Bse1I	ACTGG	6 cut(s)	390, 724, 1185, 1312, 2086, 2465
Bse3DI	GCAATG	5 cut(s)	560, 1050, 1425, 1881, 2032
BseBI	CCWGG	8 cut(s)	443, 649, 694, 878, 1109, 1815, 2088, 2201
BseCI	ATCGAT	1 cut(s)	1484
BseDI	CCNNGG	9 cut(s)	442, 621, 633, 647, 693, 763, 1108, 2199, 2493
BseGI	GGATG	5 cut(s)	301, 664, 955, 1247, 1393
BseLI	CCNNNNNNNGG	6 cut(s)	202, 378, 648, 1307, 1510, 1511
BseMI	GCAATG	5 cut(s)	560, 1050, 1425, 1881, 2032
BseMII	CTCAG	7 cut(s)	423, 501, 1139, 1214, 1693, 1807, 2210
BseNI	ACTGG	6 cut(s)	390, 724, 1185, 1312, 2086, 2465
BseRI	GAGGAG	4 cut(s)	185, 1167, 1252, 1551
BseXI	GCAGC	9 cut(s)	827, 1204, 1255, 1480, 1483, 2128, 2335, 2357, 2447
BseYI	CCCAGC	3 cut(s)	798, 818, 1220
BsgI	GTGCAG	2 cut(s)	834, 1683
Bsh1236I	CGCG	3 cut(s)	251, 635, 787
BshVI	ATCGAT	1 cut(s)	1484
BsiHKAI	GWGCWC	1 cut(s)	105
BsiSI	CCGG	5 cut(s)	43, 338, 427, 765, 1251
BslFI	GGGAC	4 cut(s)	460, 1193, 2266, 2294
BslI	CCNNNNNNNGG	6 cut(s)	202, 378, 648, 1307, 1510, 1511
BsmAI	GTCTC	4 cut(s)	608, 845, 855, 2215
BsmFI	GGGAC	4 cut(s)	460, 1193, 2266, 2294
BsmI	GAATGC	3 cut(s)	470, 612, 1477
Bso31I	GGTCTC	2 cut(s)	845, 855
Bsp1286I	GDGCHC	2 cut(s)	105, 641
BspCNI	CTCAG	7 cut(s)	424, 502, 1140, 1213, 1692, 1806, 2211
BspDI	ATCGAT	1 cut(s)	1484
BspFNI	CGCG	3 cut(s)	251, 635, 787
BspHI	TCATGA	5 cut(s)	177, 1132, 1411, 1596, 2008
BspLI	GGNNCC	5 cut(s)	640, 1181, 1182, 1514, 2499
BspMAI	CTGCAG	1 cut(s)	985
BspPI	GGATC	1 cut(s)	1404
BspQI	GCTCTTC	2 cut(s)	981, 1560
BspTNI	GGTCTC	2 cut(s)	845, 855
BsrBI	CCGCTC	1 cut(s)	274
BsrDI	GCAATG	5 cut(s)	560, 1050, 1425, 1881, 2032
BsrI	ACTGG	6 cut(s)	390, 724, 1185, 1312, 2086, 2465
BssECI	CCNNGG	9 cut(s)	442, 621, 633, 647, 693, 763, 1108, 2199, 2493
BssNI	GRCGYC	1 cut(s)	341
BssT1I	CCWWGG	1 cut(s)	621
Bst2UI	CCWGG	8 cut(s)	443, 649, 694, 878, 1109, 1815, 2088, 2201
Bst4CI	ACNGT	5 cut(s)	709, 727, 1063, 1288, 1843
Bst6I	CTCTTC	6 cut(s)	341, 981, 1560, 1665, 1792, 2389
BstACI	GRCGYC	1 cut(s)	341
BstAPI	GCANNNNNTGC	2 cut(s)	601, 1362
BstC8I	GCNNGC	7 cut(s)	101, 253, 637, 917, 1344, 2262, 2433
BstDEI	CTNAG	7 cut(s)	432, 510, 1148, 1200, 1679, 1793, 2219
BstDSI	CCRYGG	2 cut(s)	633, 2493
BstENI	CCTNNNNNAGG	1 cut(s)	200
BstF5I	GGATG	5 cut(s)	301, 664, 955, 1247, 1393
BstFNI	CGCG	3 cut(s)	251, 635, 787
BstHHI	GCGC	2 cut(s)	542, 789
BstMAI	GTCTC	4 cut(s)	608, 845, 855, 2215
BstNI	CCWGG	8 cut(s)	443, 649, 694, 878, 1109, 1815, 2088, 2201
BstSFI	CTRYAG	1 cut(s)	981
BstUI	CGCG	3 cut(s)	251, 635, 787
BstV1I	GCAGC	9 cut(s)	827, 1204, 1255, 1480, 1483, 2128, 2335, 2357, 2447
BstV2I	GAAGAC	1 cut(s)	2007
BstX2I	RGATCY	1 cut(s)	1235
BstXI	CCANNNNNNTGG	1 cut(s)	655
BstYI	RGATCY	1 cut(s)	1235
Bsu15I	ATCGAT	1 cut(s)	1484
BsuI	GTATCC	2 cut(s)	916, 2479
BsuTUI	ATCGAT	1 cut(s)	1484
BtgI	CCRYGG	2 cut(s)	633, 2493
BtgZI	GCGATG	2 cut(s)	302, 871
BtrI	CACGTC	1 cut(s)	175
BtsCI	GGATG	5 cut(s)	301, 664, 955, 1247, 1393
BtsI	GCAGTG	2 cut(s)	978, 1941
BtsIMutI	CAGTG	7 cut(s)	507, 717, 732, 978, 1466, 1941, 2297
Cac8I	GCNNGC	7 cut(s)	101, 253, 637, 917, 1344, 2262, 2433
CaiI	CAGNNNCTG	2 cut(s)	1307, 2351
CciI	TCATGA	5 cut(s)	177, 1132, 1411, 1596, 2008
CfoI	GCGC	2 cut(s)	542, 789
Cfr13I	GGNCC	8 cut(s)	40, 279, 424, 1180, 1513, 2084, 2203, 2450
Cfr42I	CCGCGG	1 cut(s)	636
ClaI	ATCGAT	1 cut(s)	1484
CpoI	CGGWCCG	1 cut(s)	40
CseI	GACGC	2 cut(s)	330, 2204
Csp6I	GTAC	4 cut(s)	505, 1655, 2046, 2079
CspI	CGGWCCG	1 cut(s)	40
CviQI	GTAC	4 cut(s)	505, 1655, 2046, 2079
DdeI	CTNAG	7 cut(s)	432, 510, 1148, 1200, 1679, 1793, 2219
EaeI	YGGCCR	3 cut(s)	1069, 1290, 2490
Eam1104I	CTCTTC	6 cut(s)	341, 981, 1560, 1665, 1792, 2389
EarI	CTCTTC	6 cut(s)	341, 981, 1560, 1665, 1792, 2389
EciI	GGCGGA	2 cut(s)	30, 659
Ecl136II	GAGCTC	1 cut(s)	103
Eco130I	CCWWGG	1 cut(s)	621
Eco24I	GRGCYC	2 cut(s)	105, 641
Eco31I	GGTCTC	2 cut(s)	845, 855
Eco32I	GATATC	2 cut(s)	1081, 1159
Eco47I	GGWCC	6 cut(s)	40, 279, 424, 1180, 2084, 2450
Eco53kI	GAGCTC	1 cut(s)	103
Eco57I	CTGAAG	3 cut(s)	975, 1727, 1889
EcoICRI	GAGCTC	1 cut(s)	103
EcoNI	CCTNNNNNAGG	1 cut(s)	200
EcoO109I	RGGNCCY	2 cut(s)	1180, 2203
EcoRII	CCWGG	8 cut(s)	441, 647, 692, 876, 1107, 1813, 2086, 2199
EcoRV	GATATC	2 cut(s)	1081, 1159
EcoT14I	CCWWGG	1 cut(s)	621
EcoT38I	GRGCYC	2 cut(s)	105, 641
ErhI	CCWWGG	1 cut(s)	621
FaqI	GGGAC	4 cut(s)	460, 1193, 2266, 2294
FauI	CCCGC	2 cut(s)	628, 640
FauNDI	CATATG	1 cut(s)	1723
FbaI	TGATCA	4 cut(s)	132, 1615, 2050, 2095
FokI	GGATG	5 cut(s)	308, 671, 962, 1234, 1400
FriOI	GRGCYC	2 cut(s)	105, 641
FspBI	CTAG	4 cut(s)	1761, 1853, 1974, 2417
FspI	TGCGCA	1 cut(s)	541
GlaI	GCGC	2 cut(s)	541, 788
GsaI	CCCAGC	3 cut(s)	802, 822, 1224
GsuI	CTGGAG	2 cut(s)	182, 425
HapII	CCGG	5 cut(s)	43, 338, 427, 765, 1251
HgaI	GACGC	2 cut(s)	330, 2204
HhaI	GCGC	2 cut(s)	542, 789
Hin1I	GRCGYC	1 cut(s)	341
Hin6I	GCGC	2 cut(s)	540, 787
HinP1I	GCGC	2 cut(s)	540, 787
HincII	GTYRAC	1 cut(s)	304
HindII	GTYRAC	1 cut(s)	304
HindIII	AAGCTT	4 cut(s)	6, 76, 792, 2162
HpaI	GTTAAC	1 cut(s)	304
HpaII	CCGG	5 cut(s)	43, 338, 427, 765, 1251
HphI	GGTGA	6 cut(s)	406, 418, 713, 1814, 2102, 2456
Hpy99I	CGWCG	3 cut(s)	218, 346, 520
HpyCH4III	ACNGT	5 cut(s)	709, 727, 1063, 1288, 1843
HpyCH4IV	ACGT	3 cut(s)	174, 1548, 2055
HpyF3I	CTNAG	7 cut(s)	432, 510, 1148, 1200, 1679, 1793, 2219
HpySE526I	ACGT	3 cut(s)	174, 1548, 2055
Hsp92I	GRCGYC	1 cut(s)	341
HspAI	GCGC	2 cut(s)	540, 787
KflI	GGGWCCC	1 cut(s)	1180
Ksp22I	TGATCA	4 cut(s)	132, 1615, 2050, 2095
KspAI	GTTAAC	1 cut(s)	304
KspI	CCGCGG	1 cut(s)	636
LguI	GCTCTTC	2 cut(s)	981, 1560
LmnI	GCTCC	5 cut(s)	271, 644, 1110, 1816, 2503
Lsp1109I	GCAGC	9 cut(s)	827, 1204, 1255, 1480, 1483, 2128, 2335, 2357, 2447
LweI	GCATC	4 cut(s)	279, 940, 1747, 2413
MaeI	CTAG	4 cut(s)	1761, 1853, 1974, 2417
MaeII	ACGT	3 cut(s)	174, 1548, 2055
MaeIII	GTNAC	3 cut(s)	406, 701, 2194
MbiI	CCGCTC	1 cut(s)	274
MflI	RGATCY	1 cut(s)	1235
MhlI	GDGCHC	2 cut(s)	105, 641
MlsI	TGGCCA	2 cut(s)	1071, 1292
MluCI	AATT	9 cut(s)	359, 581, 892, 1373, 1407, 1750, 1959, 2323, 2355
MluI	ACGCGT	1 cut(s)	249
MluNI	TGGCCA	2 cut(s)	1071, 1292
MlyI	GAGTC	8 cut(s)	78, 152, 403, 840, 1772, 1979, 1997, 2311
MmeI	TCCRAC	2 cut(s)	106, 237
Mox20I	TGGCCA	2 cut(s)	1071, 1292
MroXI	GAANNNNTTC	2 cut(s)	56, 2184
MscI	TGGCCA	2 cut(s)	1071, 1292
MseI	TTAA	8 cut(s)	303, 453, 1277, 1337, 1748, 1862, 1911, 2387
MslI	CAYNNNNRTG	4 cut(s)	152, 317, 2013, 2058
Msp20I	TGGCCA	2 cut(s)	1071, 1292
MspA1I	CMGCKG	4 cut(s)	635, 818, 1705, 2348
MspI	CCGG	5 cut(s)	43, 338, 427, 765, 1251
Mva1269I	GAATGC	3 cut(s)	470, 612, 1477
MvaI	CCWGG	8 cut(s)	443, 649, 694, 878, 1109, 1815, 2088, 2201
MvnI	CGCG	3 cut(s)	251, 635, 787
NciI	CCSGG	3 cut(s)	44, 765, 1252
NdeI	CATATG	1 cut(s)	1723
NlaIV	GGNNCC	5 cut(s)	640, 1181, 1182, 1514, 2499
NmeAIII	GCCGAG	2 cut(s)	66, 142
NmuCI	GTSAC	2 cut(s)	406, 701
NsbI	TGCGCA	1 cut(s)	541
PagI	TCATGA	5 cut(s)	177, 1132, 1411, 1596, 2008
PciSI	GCTCTTC	2 cut(s)	981, 1560
PctI	GAATGC	3 cut(s)	470, 612, 1477
PdmI	GAANNNNTTC	2 cut(s)	56, 2184
PfeI	GAWTC	4 cut(s)	18, 261, 1486, 2287
PflMI	CCANNNNNTGG	1 cut(s)	1307
PfoI	TCCNGGA	1 cut(s)	1250
PleI	GAGTC	8 cut(s)	78, 151, 403, 839, 1772, 1978, 1997, 2310
PpsI	GAGTC	8 cut(s)	78, 151, 403, 839, 1772, 1978, 1997, 2310
PpuMI	RGGWCCY	1 cut(s)	1180
PshBI	ATTAAT	2 cut(s)	1337, 1862
PsiI	TTATAA	2 cut(s)	665, 2168
Psp124BI	GAGCTC	1 cut(s)	105
Psp5II	RGGWCCY	1 cut(s)	1180
Psp6I	CCWGG	8 cut(s)	441, 647, 692, 876, 1107, 1813, 2086, 2199
PspFI	CCCAGC	3 cut(s)	798, 818, 1220
PspGI	CCWGG	8 cut(s)	441, 647, 692, 876, 1107, 1813, 2086, 2199
PspN4I	GGNNCC	5 cut(s)	640, 1181, 1182, 1514, 2499
PspPI	GGNCC	8 cut(s)	40, 279, 424, 1180, 1513, 2084, 2203, 2450
PspPPI	RGGWCCY	1 cut(s)	1180
PstI	CTGCAG	1 cut(s)	985
PstNI	CAGNNNCTG	2 cut(s)	1307, 2351
PsuI	RGATCY	1 cut(s)	1235
PvuII	CAGCTG	3 cut(s)	818, 1705, 2348
RsaI	GTAC	4 cut(s)	506, 1656, 2047, 2080
RsaNI	GTAC	4 cut(s)	505, 1655, 2046, 2079
RseI	CAYNNNNRTG	4 cut(s)	152, 317, 2013, 2058
Rsr2I	CGGWCCG	1 cut(s)	40
RsrII	CGGWCCG	1 cut(s)	40
SacI	GAGCTC	1 cut(s)	105
SacII	CCGCGG	1 cut(s)	636
SapI	GCTCTTC	2 cut(s)	981, 1560
SaqAI	TTAA	8 cut(s)	303, 453, 1277, 1337, 1748, 1862, 1911, 2387
Sau96I	GGNCC	8 cut(s)	40, 279, 424, 1180, 1513, 2084, 2203, 2450
SchI	GAGTC	8 cut(s)	78, 152, 403, 840, 1772, 1979, 1997, 2311
SduI	GDGCHC	2 cut(s)	105, 641
SfaNI	GCATC	4 cut(s)	279, 940, 1747, 2413
SfcI	CTRYAG	1 cut(s)	981
Sfr303I	CCGCGG	1 cut(s)	636
SgrBI	CCGCGG	1 cut(s)	636
SinI	GGWCC	6 cut(s)	40, 279, 424, 1180, 2084, 2450
SmiMI	CAYNNNNRTG	4 cut(s)	152, 317, 2013, 2058
SmlI	CTYRAG	2 cut(s)	223, 1208
SmoI	CTYRAG	2 cut(s)	223, 1208
Sse9I	AATT	9 cut(s)	359, 581, 892, 1373, 1407, 1750, 1959, 2323, 2355
SspI	AATATT	2 cut(s)	2183, 2487
SspMI	CTAG	4 cut(s)	1761, 1853, 1974, 2417
SstI	GAGCTC	1 cut(s)	105
StyI	CCWWGG	1 cut(s)	621
TaaI	ACNGT	5 cut(s)	709, 727, 1063, 1288, 1843
TaiI	ACGT	3 cut(s)	177, 1551, 2058
TaqI	TCGA	9 cut(s)	48, 123, 162, 231, 344, 1477, 1484, 1888, 1968
TasI	AATT	9 cut(s)	359, 581, 892, 1373, 1407, 1750, 1959, 2323, 2355
TatI	WGTACW	2 cut(s)	504, 1654
TauI	GCSGC	2 cut(s)	93, 277
TfiI	GAWTC	4 cut(s)	18, 261, 1486, 2287
Tru1I	TTAA	8 cut(s)	303, 453, 1277, 1337, 1748, 1862, 1911, 2387
Tru9I	TTAA	8 cut(s)	303, 453, 1277, 1337, 1748, 1862, 1911, 2387
TscAI	CASTG	7 cut(s)	514, 724, 732, 985, 1473, 1941, 2297
TseFI	GTSAC	2 cut(s)	406, 701
TseI	GCWGC	9 cut(s)	815, 1217, 1268, 1493, 1496, 2141, 2345, 2348, 2435
Tsp45I	GTSAC	2 cut(s)	406, 701
TspDTI	ATGAA	8 cut(s)	148, 840, 874, 1011, 1149, 1386, 1400, 2193
TspGWI	ACGGA	1 cut(s)	1916
TspRI	CASTG	7 cut(s)	514, 724, 732, 985, 1473, 1941, 2297
Van91I	CCANNNNNTGG	1 cut(s)	1307
VpaK11BI	GGWCC	6 cut(s)	40, 279, 424, 1180, 2084, 2450
VspI	ATTAAT	2 cut(s)	1337, 1862
XagI	CCTNNNNNAGG	1 cut(s)	200
XapI	RAATTY	5 cut(s)	581, 892, 1373, 1750, 2355
XcmI	CCANNNNNNNNNTGG	1 cut(s)	806
XmnI	GAANNNNTTC	2 cut(s)	56, 2184
XspI	CTAG	4 cut(s)	1761, 1853, 1974, 2417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.