Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0008771

Physical Location & Seq

Genomic Coordinates Reverse (-)

32194253 .. 32199144

Gene Structure 4892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1224200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGGAGGCCTACGGAGGATACTTGGTGGATGAGAAGGCGGTGAGGGTAGAGTCCATCTTCGTGGACTTCCTCAAGAACTTCAGGATCGCAGGTGGAGGAGGAGAGGCGTATTACGAGGCGGAGATCGAAGCCATGGCCGCCAACGAATCCAGCACCATGTTCATTGACTTCTCCCACGTTATGGTCTTCAACAATCTCCTCCAGAAAGCCATTTCCGACGAGTTTCTCAGGTTTGAGCCCTATTTGAAGAACGCTTGCAAGACATTCGTGACCCAGCTCCGCCCCAACTTCATCTCCGACGATACAAACAAGGACATCAATGTCGCCTTCTTCAACCTCCCCGTCTCCAAGAGGTTGAGGGAATTGACCACTGCAGAAATTGGAAAATTGGTATCGGTGAAAGGTGTGGTGACTCGGACCAGTGAGGTTCGACCAGAGCTTCTCCACGGGACATTCAAGTGCTTGGAGTGCGGAGGCGTCATCAAGAATGTCGAACAACAATTCAAGTACACCGAGCCAACAATCTGTGTCAATGCCACCTGCTCCAATAGAGCAAGGTGGGCGTTGCTTCGGCAAGAGAGCAAATTTGCAGACTGGCAGAGGGTACGAATGCAGGAGACGTCCAAAGAGATACCTGCAGGCTCCCTTCCTAGATCACTGGATGTTATTATCCGCCACGAGATTGTTGAGAAGGCCAGGGCCGGTGACACGGTCATTTTCACGGGCACAGTGGTTGTCATACCAGACATAATGGCATTGGCCTCCCCTGGAGACAGAGCAGAGTGTTCTCGACAAGCATCCCAGCGCAATGGTTCTATGGCTGGACATGAAGGAGTGAGGGGTCTAAAAGCATTGGGAGTGAGAGACCTCTCCTATCGCCTTGCCTTTATTGCCAACTCAGTTCAGATTTCTGATGGTAGACAGGATACTGATGTCCGGAATAGAAAGAAGGATGCTGACGACGATGACAACCAGCAGTTCACTGAAGAAGAGAAAGACGAAGTTCAAAGAATGAGGAATACCCCTGATTTCTTCAATAAGCTTGTTGATAGCATTGCCCCAACTGTATTTGGCCATCAAGATATCAAGCGTGCAATTCTGCTTATGCTCCTGGGTGGTGTCCACAAGTTTACTCATGAAGGCATCAACTTGAGAGGAGACATCAATGTTTGTATAGTTGGAGACCCCAGTTGTGCAAAATCTCAGTTCCTCAAGTATACGGCAGGAATAGTTCCAAGATCTGTTTACACTTCTGGGAAATCCTCCTCTGCTGCTGGTTTAACTGCAACTGTTGCCAAAGAACCAGAAACAGGAGAATTTTGTATTGAGGCAGGCGCGTTAATGCTTGCTGACAATGGTATTTGTTGCATTGATGAATTTGACAAAATGGACATTAGGGATCAGGTTGCGATTCATGAGGCCATGGAACAACAGACAATAAGCATTACAAAAGCAGGGATACAGGCAACACTGAATGCTCGAACATCAATTCTCGCTGCTGCTAACCCCACAGGCGGCCGTTATGATAAATCTAAACCACTCAAGTATAATGTGGCTCTTCCTCCTCCTATCCTCTCAAGGTTTGATCTGGTATATGTTATGATTGATGACCCAGATGATCAAACTGATTACCACATTGCCCACCACATTGTAAGAGTACATCAAAAGCGCGAAGAGGCACTCACTCCTGAATTCACTACTGCACAGCTGAAACGTTATATTGCATTTGCTAAAACTCTGAAACCTAAGTTAAACTCCGATGCTAGAAAGCTGTTGGTGGAATCTTATGTTGCTCTCAGAAGAGGTGATACTGCTCCTGGTAGTAGAGTTGCTTATCGCATGACAGTTAGGCAACTAGAGGCGTTGATTAGACTATCCGAAGCCATTGCTCGAAGTCATTTAGACCTTCAGGTAAAACCAGCCCATGTCCGTTTAGCAGTGAGATTGCTGAAAACATCAGTGATCAGTGTGGAGTCTAGTGAGATTGATCTGTCCGATTTTGATCAAGGTGTAGCAAATGATGATGGTGCAGCTGACCAAGGAAAGATTAAAGTAAGTGATGAATACTTTCAGAGGATTGCCCAGGCCCTTGTCATGCGTCTTAGACAGCATGAAGAAGATGTTAGGCAAAGCGGGACAGGGCTGGCTGGAATGAGGCAGAGGGATTTGATTGAATGGTATGTGAGACAGCAGGACGAGAAAAATGCTTACAGTTCCAAGGAGGAGGCGGAGCGTGAAGTCACCATAATCAGTGCCATAATAGAGTGGTTGATAACAAGAGAAGGACATCTGATAGTACTACATGACGGTAGTCAAGCAGCAGAAGGCGAGGGTGAAGGCGAAGGTGGAGGTCAAGGTGAAGGCGAAGGTGTAGGGCAACAGTCAAAAAAATCTAGAAAAGAAAGAATATTGACTGTGAATCCCAACTATGTTATAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0051276 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

814

Amino Acids

90.46

Weight (kDa)

5.91

Isoelectric Point (pI)

35.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_N	PF14551	20 - 112	1.5e-15	MCM N-terminal domain
MCM_OB	PF17207	119 - 247	7.3e-41	MCM OB domain
MCM	PF00493	332 - 554	2.5e-102	MCM P-loop domain
Mg_chelatase	PF01078	441 - 531	2e-06	Magnesium chelatase, subunit ChlI
MCM_lid	PF17855	569 - 653	2.9e-23	MCM AAA-lid domain
WHD_MCM6	PF18263	682 - 812	1.7e-20	MCM6 C-terminal winged-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44635 AT5G44635
fragaria_vesca	FvH4_3g13360 FvH4_3g13360 FvH4_3g13360 FvH4_3g13360
malus_domestica	MD05G1242400.v1.1 MD10G1224200.v1.1
prunus_persica	Prupe.4G121000_v2.0.a1 Prupe.4G121000_v2.0.a1 Prupe.4G121000_v2.0.a1
pyrus_communis	pycom05g21890 pycom10g18820
rosa_chinensis	RchiOBHm_Chr5g0022071
rosa_laevigata	RLG00000032641
rosa_multiflora	Rmu_sc0006966.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056860
rosa_rugosa	Rorug05G0070900
rosa_samantha	Rh5AG158900 Rh5BG158200 Rh5CG172600 Rh5DG158400
rosa_wichuraiana	Rw5G014180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	80, 548
AasI	GACNNNNNNGTC	1 cut(s)	320
AatII	GACGTC	1 cut(s)	623
Acc36I	ACCTGC	3 cut(s)	80, 548, 643
AccB7I	CCANNNNNTGG	1 cut(s)	181
AccI	GTMKAC	2 cut(s)	919, 1217
AccII	CGCG	2 cut(s)	1337, 1671
AccIII	TCCGGA	1 cut(s)	936
AciI	CCGC	9 cut(s)	38, 119, 138, 280, 471, 673, 1515, 2133, 2228
AclI	AACGTT	1 cut(s)	1714
AclWI	GGATC	2 cut(s)	92, 1407
AcoI	YGGCCR	3 cut(s)	135, 1072, 1516
AcsI	RAATTY	4 cut(s)	584, 1316, 1376, 1691
AcuI	CTGAAG	3 cut(s)	64, 1005, 1892
AcyI	GRCGYC	2 cut(s)	477, 620
AfaI	GTAC	4 cut(s)	509, 606, 1659, 2298
AfiI	CCNNNNNNNGG	3 cut(s)	181, 1310, 1514
AgsI	TTSAA	8 cut(s)	190, 247, 334, 457, 505, 1007, 1036, 2174
AjnI	CCWGG	5 cut(s)	695, 766, 1110, 1816, 2082
AluBI	AGCT	6 cut(s)	277, 439, 1042, 1708, 1771, 2033
AluI	AGCT	6 cut(s)	277, 439, 1042, 1708, 1771, 2033
Alw26I	GTCTC	7 cut(s)	349, 611, 765, 858, 1152, 1176, 2179
AlwI	GGATC	2 cut(s)	92, 1407
Aor13HI	TCCGGA	1 cut(s)	936
AoxI	GGCC	9 cut(s)	6, 135, 693, 699, 759, 1072, 1419, 1516, 2085
ApeKI	GCWGC	5 cut(s)	1271, 1496, 1499, 2030, 2318
ApoI	RAATTY	4 cut(s)	584, 1316, 1376, 1691
Asp700I	GAANNNNTTC	1 cut(s)	2067
AspLEI	GCGC	3 cut(s)	807, 1337, 1671
AspS9I	GGNCC	3 cut(s)	417, 699, 2086
AsuHPI	GGTGA	8 cut(s)	52, 409, 421, 716, 1817, 2233, 2345, 2369
AvaII	GGWCC	1 cut(s)	417
BaeGI	GKGCMC	1 cut(s)	728
BaeI	ACNNNNGTAYC	2 cut(s)	918, 951
BalI	TGGCCA	1 cut(s)	1074
BanII	GRGCYC	1 cut(s)	240
BarI	GAAGNNNNNNTAC	2 cut(s)	1792, 1824
BauI	CACGAG	1 cut(s)	677
BbsI	GAAGAC	1 cut(s)	178
BbvI	GCAGC	5 cut(s)	1258, 1483, 1486, 2042, 2330
BccI	CCATC	4 cut(s)	62, 908, 1083, 2018
BceAI	ACGGC	2 cut(s)	1236, 1503
BcgI	CGANNNNNNTGC	6 cut(s)	247, 281, 1868, 1902, 2186, 2220
BciT130I	CCWGG	5 cut(s)	697, 768, 1112, 1818, 2084
BciVI	GTATCC	3 cut(s)	11, 919, 1452
BclI	TGATCA	3 cut(s)	1618, 1962, 2002
BcoDI	GTCTC	7 cut(s)	349, 611, 765, 858, 1152, 1176, 2179
BfaI	CTAG	5 cut(s)	651, 1764, 1856, 1977, 2394
BfmI	CTRYAG	2 cut(s)	372, 636
BfuAI	ACCTGC	3 cut(s)	80, 548, 643
BfuI	GTATCC	3 cut(s)	11, 919, 1452
BglII	AGATCT	1 cut(s)	1238
BisI	GCNGC	7 cut(s)	138, 1272, 1497, 1500, 1516, 2031, 2319
BlsI	GCNGC	7 cut(s)	139, 1273, 1498, 1501, 1517, 2032, 2320
BmcAI	AGTACT	1 cut(s)	2298
Bme1390I	CCNGG	5 cut(s)	697, 768, 1112, 1818, 2084
Bme18I	GGWCC	1 cut(s)	417
BmgT120I	GGNCC	3 cut(s)	417, 699, 2086
BmiI	GGNNCC	1 cut(s)	643
BmrFI	CCNGG	5 cut(s)	697, 768, 1112, 1818, 2084
BmrI	ACTGGG	1 cut(s)	1182
BmsI	GCATC	4 cut(s)	806, 943, 1152, 1750
BmuI	ACTGGG	1 cut(s)	1182
BoxI	GACNNNNGTC	1 cut(s)	2310
BpiI	GAAGAC	1 cut(s)	178
BpmI	CTGGAG	2 cut(s)	185, 789
BpuEI	CTTGAG	5 cut(s)	56, 1171, 1196, 1526, 1561
BsaBI	GATNNNNATC	1 cut(s)	2001
BsaHI	GRCGYC	2 cut(s)	477, 620
BsaI	GGTCTC	2 cut(s)	858, 1176
BsaJI	CCNNGG	9 cut(s)	132, 445, 696, 766, 1111, 1422, 2038, 2082, 2217
BsaWI	WCCGGW	1 cut(s)	936
BsaXI	ACNNNNNCTCC	2 cut(s)	278, 308
Bsc4I	CCNNNNNNNGG	3 cut(s)	181, 1310, 1514
Bse118I	RCCGGY	1 cut(s)	701
Bse1I	ACTGG	4 cut(s)	420, 599, 663, 1188
Bse3DI	GCAATG	4 cut(s)	814, 1053, 1635, 1884
Bse8I	GATNNNNATC	1 cut(s)	2001
BseAI	TCCGGA	1 cut(s)	936
BseBI	CCWGG	5 cut(s)	697, 768, 1112, 1818, 2084
BseDI	CCNNGG	9 cut(s)	132, 445, 696, 766, 1111, 1422, 2038, 2082, 2217
BseGI	GGATG	4 cut(s)	34, 667, 797, 958
BseJI	GATNNNNATC	1 cut(s)	2001
BseLI	CCNNNNNNNGG	3 cut(s)	181, 1310, 1514
BseMI	GCAATG	4 cut(s)	814, 1053, 1635, 1884
BseMII	CTCAG	4 cut(s)	241, 912, 1217, 1810
BseNI	ACTGG	4 cut(s)	420, 599, 663, 1188
BseRI	GAGGAG	7 cut(s)	111, 114, 188, 1170, 1255, 1554, 2237
BseSI	GKGCMC	1 cut(s)	728
BseX3I	CGGCCG	1 cut(s)	1516
BseXI	GCAGC	5 cut(s)	1258, 1483, 1486, 2042, 2330
BseYI	CCCAGC	2 cut(s)	273, 801
BsgI	GTGCAG	2 cut(s)	1686, 2049
Bsh1236I	CGCG	2 cut(s)	1337, 1671
Bsh1285I	CGRYCG	1 cut(s)	1519
BshFI	GGCC	9 cut(s)	8, 137, 695, 701, 761, 1074, 1421, 1518, 2087
BsiEI	CGRYCG	1 cut(s)	1519
BsiSI	CCGG	2 cut(s)	702, 937
BslFI	GGGAC	2 cut(s)	463, 2149
BslI	CCNNNNNNNGG	3 cut(s)	181, 1310, 1514
BsmAI	GTCTC	7 cut(s)	349, 611, 765, 858, 1152, 1176, 2179
BsmBI	CGTCTC	2 cut(s)	349, 611
BsmFI	GGGAC	2 cut(s)	463, 2149
BsmI	GAATGC	2 cut(s)	615, 1480
BsnI	GGCC	9 cut(s)	8, 137, 695, 701, 761, 1074, 1421, 1518, 2087
Bso31I	GGTCTC	2 cut(s)	858, 1176
Bsp1286I	GDGCHC	2 cut(s)	240, 728
Bsp13I	TCCGGA	1 cut(s)	936
Bsp19I	CCATGG	2 cut(s)	132, 1422
BspACI	CCGC	9 cut(s)	38, 119, 138, 280, 471, 673, 1515, 2133, 2228
BspANI	GGCC	9 cut(s)	8, 137, 695, 701, 761, 1074, 1421, 1518, 2087
BspCNI	CTCAG	4 cut(s)	240, 911, 1216, 1809
BspEI	TCCGGA	1 cut(s)	936
BspFNI	CGCG	2 cut(s)	1337, 1671
BspHI	TCATGA	2 cut(s)	1135, 1414
BspLI	GGNNCC	1 cut(s)	643
BspMAI	CTGCAG	2 cut(s)	376, 640
BspMI	ACCTGC	3 cut(s)	80, 548, 643
BspPI	GGATC	2 cut(s)	92, 1407
BspQI	GCTCTTC	1 cut(s)	1563
BspTNI	GGTCTC	2 cut(s)	858, 1176
BsrDI	GCAATG	4 cut(s)	814, 1053, 1635, 1884
BsrFI	RCCGGY	1 cut(s)	701
BsrI	ACTGG	4 cut(s)	420, 599, 663, 1188
BssAI	RCCGGY	1 cut(s)	701
BssECI	CCNNGG	9 cut(s)	132, 445, 696, 766, 1111, 1422, 2038, 2082, 2217
BssNAI	GTATAC	1 cut(s)	1218
BssNI	GRCGYC	2 cut(s)	477, 620
BssSI	CACGAG	1 cut(s)	677
BssT1I	CCWWGG	4 cut(s)	132, 1422, 2038, 2217
Bst1107I	GTATAC	1 cut(s)	1218
Bst2BI	CACGAG	1 cut(s)	677
Bst2UI	CCWGG	5 cut(s)	697, 768, 1112, 1818, 2084
Bst4CI	ACNGT	9 cut(s)	712, 730, 1066, 1291, 1846, 2213, 2309, 2382, 2416
Bst6I	CTCTTC	4 cut(s)	984, 1563, 1668, 1795
BstACI	GRCGYC	2 cut(s)	477, 620
BstAPI	GCANNNNNTGC	1 cut(s)	1292
BstC8I	GCNNGC	6 cut(s)	256, 640, 1092, 1333, 1347, 2145
BstDEI	CTNAG	6 cut(s)	227, 898, 1203, 1746, 1796, 2102
BstDSI	CCRYGG	3 cut(s)	132, 445, 1422
BstF5I	GGATG	4 cut(s)	34, 667, 797, 958
BstFNI	CGCG	2 cut(s)	1337, 1671
BstHHI	GCGC	3 cut(s)	807, 1337, 1671
BstMAI	GTCTC	7 cut(s)	349, 611, 765, 858, 1152, 1176, 2179
BstMCI	CGRYCG	1 cut(s)	1519
BstMWI	GCNNNNNNNGC	5 cut(s)	137, 468, 560, 890, 1292
BstNI	CCWGG	5 cut(s)	697, 768, 1112, 1818, 2084
BstPAI	GACNNNNGTC	1 cut(s)	2310
BstSCI	CCNGG	5 cut(s)	695, 766, 1110, 1816, 2082
BstSFI	CTRYAG	2 cut(s)	372, 636
BstSLI	GKGCMC	1 cut(s)	728
BstUI	CGCG	2 cut(s)	1337, 1671
BstV1I	GCAGC	5 cut(s)	1258, 1483, 1486, 2042, 2330
BstV2I	GAAGAC	1 cut(s)	178
BstX2I	RGATCY	1 cut(s)	1238
BstXI	CCANNNNNNTGG	2 cut(s)	61, 809
BstYI	RGATCY	1 cut(s)	1238
BstZ17I	GTATAC	1 cut(s)	1218
BstZI	CGGCCG	1 cut(s)	1516
BsuI	GTATCC	3 cut(s)	11, 919, 1452
BsuRI	GGCC	9 cut(s)	8, 137, 695, 701, 761, 1074, 1421, 1518, 2087
BtgI	CCRYGG	3 cut(s)	132, 445, 1422
BtsCI	GGATG	4 cut(s)	34, 667, 797, 958
BtsI	GCAGTG	2 cut(s)	369, 1944
BveI	ACCTGC	3 cut(s)	80, 548, 643
Cac8I	GCNNGC	6 cut(s)	256, 640, 1092, 1333, 1347, 2145
CciI	TCATGA	2 cut(s)	1135, 1414
CfoI	GCGC	3 cut(s)	807, 1337, 1671
Cfr10I	RCCGGY	1 cut(s)	701
Cfr13I	GGNCC	3 cut(s)	417, 699, 2086
CseI	GACGC	2 cut(s)	466, 2087
Csp6I	GTAC	4 cut(s)	508, 605, 1658, 2297
CviQI	GTAC	4 cut(s)	508, 605, 1658, 2297
DdeI	CTNAG	6 cut(s)	227, 898, 1203, 1746, 1796, 2102
DrdI	GACNNNNNNGTC	1 cut(s)	320
DseDI	GACNNNNNNGTC	1 cut(s)	320
EaeI	YGGCCR	3 cut(s)	135, 1072, 1516
EagI	CGGCCG	1 cut(s)	1516
Eam1104I	CTCTTC	4 cut(s)	984, 1563, 1668, 1795
EarI	CTCTTC	4 cut(s)	984, 1563, 1668, 1795
EciI	GGCGGA	4 cut(s)	134, 269, 662, 2243
EclXI	CGGCCG	1 cut(s)	1516
Eco130I	CCWWGG	4 cut(s)	132, 1422, 2038, 2217
Eco147I	AGGCCT	1 cut(s)	8
Eco24I	GRGCYC	1 cut(s)	240
Eco31I	GGTCTC	2 cut(s)	858, 1176
Eco32I	GATATC	1 cut(s)	1084
Eco47I	GGWCC	1 cut(s)	417
Eco52I	CGGCCG	1 cut(s)	1516
Eco57I	CTGAAG	3 cut(s)	64, 1005, 1892
EcoO109I	RGGNCCY	1 cut(s)	2086
EcoRI	GAATTC	1 cut(s)	1691
EcoRII	CCWGG	5 cut(s)	695, 766, 1110, 1816, 2082
EcoRV	GATATC	1 cut(s)	1084
EcoT14I	CCWWGG	4 cut(s)	132, 1422, 2038, 2217
EcoT38I	GRGCYC	1 cut(s)	240
ErhI	CCWWGG	4 cut(s)	132, 1422, 2038, 2217
Esp3I	CGTCTC	2 cut(s)	349, 611
FaqI	GGGAC	2 cut(s)	463, 2149
FauI	CCCGC	1 cut(s)	2126
FbaI	TGATCA	3 cut(s)	1618, 1962, 2002
FblI	GTMKAC	2 cut(s)	919, 1217
Fnu4HI	GCNGC	7 cut(s)	138, 1272, 1497, 1500, 1516, 2031, 2319
FokI	GGATG	4 cut(s)	41, 674, 784, 965
FriOI	GRGCYC	1 cut(s)	240
Fsp4HI	GCNGC	7 cut(s)	138, 1272, 1497, 1500, 1516, 2031, 2319
FspBI	CTAG	5 cut(s)	651, 1764, 1856, 1977, 2394
GlaI	GCGC	3 cut(s)	806, 1336, 1670
GluI	GCNGC	7 cut(s)	138, 1272, 1497, 1500, 1516, 2031, 2319
GsaI	CCCAGC	2 cut(s)	277, 805
GsuI	CTGGAG	2 cut(s)	185, 789
HaeIII	GGCC	9 cut(s)	8, 137, 695, 701, 761, 1074, 1421, 1518, 2087
HapII	CCGG	2 cut(s)	702, 937
HgaI	GACGC	2 cut(s)	466, 2087
HhaI	GCGC	3 cut(s)	807, 1337, 1671
Hin1I	GRCGYC	2 cut(s)	477, 620
Hin6I	GCGC	3 cut(s)	805, 1335, 1669
HinP1I	GCGC	3 cut(s)	805, 1335, 1669
HindIII	AAGCTT	1 cut(s)	1040
HinfI	GANTC	7 cut(s)	50, 146, 412, 1411, 1781, 1973, 2419
HpaII	CCGG	2 cut(s)	702, 937
HphI	GGTGA	8 cut(s)	52, 409, 421, 716, 1817, 2233, 2345, 2369
Hpy166II	GTNNAC	8 cut(s)	64, 510, 920, 981, 1123, 1131, 1218, 1246
Hpy8I	GTNNAC	8 cut(s)	64, 510, 920, 981, 1123, 1131, 1218, 1246
Hpy99I	CGWCG	3 cut(s)	221, 302, 965
HpyCH4III	ACNGT	9 cut(s)	712, 730, 1066, 1291, 1846, 2213, 2309, 2382, 2416
HpyCH4IV	ACGT	3 cut(s)	177, 620, 1714
HpyF10VI	GCNNNNNNNGC	5 cut(s)	137, 468, 560, 890, 1292
HpyF3I	CTNAG	6 cut(s)	227, 898, 1203, 1746, 1796, 2102
HpySE526I	ACGT	3 cut(s)	177, 620, 1714
Hsp92I	GRCGYC	2 cut(s)	477, 620
HspAI	GCGC	3 cut(s)	805, 1335, 1669
Kpn2I	TCCGGA	1 cut(s)	936
Ksp22I	TGATCA	3 cut(s)	1618, 1962, 2002
LguI	GCTCTTC	1 cut(s)	1563
LmnI	GCTCC	6 cut(s)	282, 548, 647, 1113, 1819, 2230
Lsp1109I	GCAGC	5 cut(s)	1258, 1483, 1486, 2042, 2330
LweI	GCATC	4 cut(s)	806, 943, 1152, 1750
MaeI	CTAG	5 cut(s)	651, 1764, 1856, 1977, 2394
MaeII	ACGT	3 cut(s)	177, 620, 1714
MaeIII	GTNAC	4 cut(s)	268, 409, 704, 2239
MflI	RGATCY	1 cut(s)	1238
MhlI	GDGCHC	2 cut(s)	240, 728
MlsI	TGGCCA	1 cut(s)	1074
MluNI	TGGCCA	1 cut(s)	1074
MlyI	GAGTC	3 cut(s)	59, 406, 1982
MmeI	TCCRAC	3 cut(s)	240, 321, 1159
Mox20I	TGGCCA	1 cut(s)	1074
MroI	TCCGGA	1 cut(s)	936
MroXI	GAANNNNTTC	1 cut(s)	2067
MscI	TGGCCA	1 cut(s)	1074
MseI	TTAA	5 cut(s)	1280, 1340, 1751, 2049, 2440
MslI	CAYNNNNRTG	2 cut(s)	59, 457
Msp20I	TGGCCA	1 cut(s)	1074
MspA1I	CMGCKG	2 cut(s)	1708, 2033
MspI	CCGG	2 cut(s)	702, 937
MspR9I	CCNGG	5 cut(s)	697, 768, 1112, 1818, 2084
Mva1269I	GAATGC	2 cut(s)	615, 1480
MvaI	CCWGG	5 cut(s)	697, 768, 1112, 1818, 2084
MvnI	CGCG	2 cut(s)	1337, 1671
MwoI	GCNNNNNNNGC	5 cut(s)	137, 468, 560, 890, 1292
NcoI	CCATGG	2 cut(s)	132, 1422
NlaIV	GGNNCC	1 cut(s)	643
NmuCI	GTSAC	4 cut(s)	268, 409, 704, 2239
PagI	TCATGA	2 cut(s)	1135, 1414
PaqCI	CACCTGC	2 cut(s)	80, 548
PceI	AGGCCT	1 cut(s)	8
PciSI	GCTCTTC	1 cut(s)	1563
PctI	GAATGC	2 cut(s)	615, 1480
PdmI	GAANNNNTTC	1 cut(s)	2067
PfeI	GAWTC	4 cut(s)	146, 1411, 1781, 2419
PflFI	GACNNNGTC	1 cut(s)	710
PflMI	CCANNNNNTGG	1 cut(s)	181
PkrI	GCNGC	7 cut(s)	139, 1273, 1498, 1501, 1517, 2032, 2320
PleI	GAGTC	3 cut(s)	58, 406, 1981
PpsI	GAGTC	3 cut(s)	58, 406, 1981
PshAI	GACNNNNGTC	1 cut(s)	2310
Psp1406I	AACGTT	1 cut(s)	1714
Psp6I	CCWGG	5 cut(s)	695, 766, 1110, 1816, 2082
PspFI	CCCAGC	2 cut(s)	273, 801
PspGI	CCWGG	5 cut(s)	695, 766, 1110, 1816, 2082
PspN4I	GGNNCC	1 cut(s)	643
PspPI	GGNCC	3 cut(s)	417, 699, 2086
PstI	CTGCAG	2 cut(s)	376, 640
PsuI	RGATCY	1 cut(s)	1238
PsyI	GACNNNGTC	1 cut(s)	710
PvuII	CAGCTG	2 cut(s)	1708, 2033
RsaI	GTAC	4 cut(s)	509, 606, 1659, 2298
RsaNI	GTAC	4 cut(s)	508, 605, 1658, 2297
RseI	CAYNNNNRTG	2 cut(s)	59, 457
SapI	GCTCTTC	1 cut(s)	1563
SaqAI	TTAA	5 cut(s)	1280, 1340, 1751, 2049, 2440
SatI	GCNGC	7 cut(s)	138, 1272, 1497, 1500, 1516, 2031, 2319
Sau96I	GGNCC	3 cut(s)	417, 699, 2086
SbfI	CCTGCAGG	1 cut(s)	640
ScaI	AGTACT	1 cut(s)	2298
SchI	GAGTC	3 cut(s)	59, 406, 1982
ScrFI	CCNGG	5 cut(s)	697, 768, 1112, 1818, 2084
SdaI	CCTGCAGG	1 cut(s)	640
SduI	GDGCHC	2 cut(s)	240, 728
SfaNI	GCATC	4 cut(s)	806, 943, 1152, 1750
SfcI	CTRYAG	2 cut(s)	372, 636
SinI	GGWCC	1 cut(s)	417
SmiMI	CAYNNNNRTG	2 cut(s)	59, 457
SmlI	CTYRAG	5 cut(s)	71, 1150, 1211, 1541, 1576
SmoI	CTYRAG	5 cut(s)	71, 1150, 1211, 1541, 1576
Sse8387I	CCTGCAGG	1 cut(s)	640
SseBI	AGGCCT	1 cut(s)	8
SsiI	CCGC	9 cut(s)	38, 119, 138, 280, 471, 673, 1515, 2133, 2228
SspI	AATATT	1 cut(s)	2409
SspMI	CTAG	5 cut(s)	651, 1764, 1856, 1977, 2394
StuI	AGGCCT	1 cut(s)	8
StyD4I	CCNGG	5 cut(s)	695, 766, 1110, 1816, 2082
StyI	CCWWGG	4 cut(s)	132, 1422, 2038, 2217
TaaI	ACNGT	9 cut(s)	712, 730, 1066, 1291, 1846, 2213, 2309, 2382, 2416
TaiI	ACGT	3 cut(s)	180, 623, 1717
TaqI	TCGA	6 cut(s)	126, 430, 492, 790, 1480, 1891
TatI	WGTACW	3 cut(s)	507, 1657, 2296
TauI	GCSGC	2 cut(s)	140, 1518
TfiI	GAWTC	4 cut(s)	146, 1411, 1781, 2419
Tru1I	TTAA	5 cut(s)	1280, 1340, 1751, 2049, 2440
Tru9I	TTAA	5 cut(s)	1280, 1340, 1751, 2049, 2440
TseFI	GTSAC	4 cut(s)	268, 409, 704, 2239
TseI	GCWGC	5 cut(s)	1271, 1496, 1499, 2030, 2318
Tsp45I	GTSAC	4 cut(s)	268, 409, 704, 2239
TspDTI	ATGAA	8 cut(s)	151, 280, 843, 1152, 1389, 1403, 2076, 2127
TspGWI	ACGGA	2 cut(s)	27, 1919
Tth111I	GACNNNGTC	1 cut(s)	710
Van91I	CCANNNNNTGG	1 cut(s)	181
VpaK11BI	GGWCC	1 cut(s)	417
XapI	RAATTY	4 cut(s)	584, 1316, 1376, 1691
XbaI	TCTAGA	1 cut(s)	2393
XmiI	GTMKAC	2 cut(s)	919, 1217
XmnI	GAANNNNTTC	1 cut(s)	2067
XspI	CTAG	5 cut(s)	651, 1764, 1856, 1977, 2394
ZraI	GACGTC	1 cut(s)	621
ZrmI	AGTACT	1 cut(s)	2298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.