Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0012854

Physical Location & Seq

Genomic Coordinates Reverse (-)

8008579 .. 8013143

Gene Structure 4565 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g13410.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGAAGTCTGTCTTCCTCTCCTTTCTTCTTGTGTTCTTCATTTGCTTCCATTGTGTTTGTTCACATGATCAGACTCTTAGGAGACAAGCCTCAATCTTGGCTTCTGTCAAGCAAGGTTTTGAAGCCTCAGATCCTTCTCTAAGTAGCTGGAATGTATCAAACTATAAGTTCCTTTGCTCTTGGGCTGGTATCATGTGTGACAACCTCAGCAGATCAGTGATTTCCTTAGACGTATCGAATTACAACCTCTCTGGTTCTCTTTCACCTGATATCACAGAACTGAGAACCCTTGTCAATCTCTCTGTGTCTGGGAATGATTTTTCAGGTAGTTTCCCAGCTGGAATTCACAAGCTTCCCAGGCTTCAATACCTCAACATATCCAACAATGGCTTTGGTGGAAGCATGGACTGGGAATTTGCTCAGCTAAAGGAGCTCATATTGCTTGATGCTTACAACAATGATTTCAATGGTTCACTCCCATTAGGTGTCACTCAACTTCCCAAGCTGAAGCGCTTAGACTTCGGAGGAAATTACTTCAGTGGCAGCATCCCTCCAAGCTATGGAAATATGTCACAGCTTAATTACCTCTCAGTTGCAGGAAATGATCTCAGTGGTTTCATACCAAGTGAGCTTGGCAACCTTACTAACCTCACTCAGCTGTTCTTGGGATATTACAATGATTTTGATGGAGGTATCCCACCTGAGATTGGTAAACTGACCAATCTGTTCCATTTAGACCTTGCAAACTGTGGCTTGGAGGGCTCAATCCCACCTGAGCTGGGAAATCTGAAGAAGCTAGACACTTTGTTCTTGCAAACCAATCAGCTCAGTGGTTCCATTCCTGCTCAGCTTGGGAACTTGAGTAGCTTGAGGTCTCTTGATCTCTCAAACAATGCACTAACAGGAGACATCCCTGTCGAGTTCTCAGCTCTCCGCGAGCTTACTCTCTTGAACTTGTTCATCAACAAGTTTCATGGAGAGATCCCTCATGAAATAGCTGAGCTGCCCAACTTGGAGGTCTTGAAGCTGTGGCAAAACAATTTCACTGGAGCAATTCCTTCAAAGCTTGGTCAGAATGGTAAACTGGTTGAGCTTGATCTGTCTACTAATAAGCTCACTGGTGAAGTCCCAAAATCTCTTTGCTTTGGAAGGAAGCTGAAGATATTGATTCTGCTCAACAATTTTCTCTTTGGGCCTCTACCTGATGATCTTGGTGAATGTGACACTCTAGTAAGAGTTAGGCTGGGGCAGAATTACCTGAGTGGATCAATTCCAAGAGGGTTTCTTTACTTGCCTGAGCTCACTCTGATGGAGCTGCAGAACAATTATCTTACTGGTCAACTTGATATGCAGGAAAAAAGCCAAGTACCCTCAAAGCTTTCTCAGCTGAATCTCTCAAGCAATCGCTTATCGGGGTCACCTCCTGCATCTATTGGAAATTTCTCTAGCTTGCAGATTCTTTTGCTAAGTGGAAACAGATTTACTGGAGAAATTCCATCTGACATAGGCCGGTTGAGAAATGTTCTAAAGTTGGATATGAGCAGAAACAATTTTTCAGGCAGCATCCCTCCAGAAATTGGAAACTGTACCTTGCTGACTTATCTAGACTTGAGCCAAAACCAACTTTCTGGTCCAATTCCACCTCAAGTTGTTCAAATTCACATACTGAATTACTTCAACGTGTCATGGAACCACTTAAACCAGAGCCTACCTAAGGAACTTGGGTCCTTGAAGAGTCTAACCTCTGCTGATTTTTCCCACAACAGCTTCTCAGGTTCAGTACCACAAACAGGTCAATACTTATTCTTTAACCACACATCTTTTATAGGCAACCCTGATTTATGTGACTCTTCAGTAAATCCTTGCAACTATTCTTCCAACTCACCATTAGAGTCTCACAACCAAAATGGCTCAAGGTCTCAAGTCCTTGGGAAATTCAAGCTTGTCTTTGCATTAGGCCTCTTGTTGTGTTCATTTGTGTTTGCGACCTTTGCAATCATAAAGACCAGAAAGGTGAGGAGGAATTCGAACACATGGAAGCTCACCGCCTTCCAGAAGCTAGAATTTGGAAGTGAAGACATCTTGGAGTGCATCAAGGACAACAATGTTATTGGGAGAGGTGGAGCTGGGATTGTATATAGAGGAACAATGTTAAGTGGCGAGCAAGTAGCTGTTAAGAAGCTGTTGGGAATCAACAAAGGCTCTTCTCATGATAATGGCCTCTCAGCAGAAATTCAGACACTTGGGAAAATCAGGCACCGGAACATTGTCCGGTTGCTAGCATTTTGCTCAAACAAAGAGACCAATCTGCTTGTTTATGAGTACATGCCAAATGGAAGCTTGGGTGAAGTTTTGCATGGGAAGAGAGGTGGATATCTAAAATGGGAGACTAGGCTTAACATAGCCATTGAAGCAGCAAAAGGGCTTTGTTACTTGCACCATGATTGTTCCCCTTTGATTCTTCATAGGGATGTCAAATCCAACAACATTTTGCTCAACTCCGAAGTATGCATACACATTGAGGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009908 GO:0010073 GO:0010075 GO:0016020 GO:0022414 GO:0032501 GO:0032502 GO:0040008 GO:0044464 GO:0048367 GO:0048437 GO:0048507 GO:0048509 GO:0048608 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0061458 GO:0065007 GO:0071944 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

843

Amino Acids

92.65

Weight (kDa)

7.0

Isoelectric Point (pI)

34.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	29 - 67	1.3e-06	Leucine rich repeat N-terminal domain
LRR_14	PF23598	113 - 222	9.3e-09	Leucine-rich repeat region
LRR_14	PF23598	232 - 322	9.8e-09	Leucine-rich repeat region
LRR_8	PF13855	265 - 323	9.6e-07	Leucine rich repeat
Pkinase	PF00069	700 - 835	1.6e-24	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	701 - 840	5.3e-24	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012854)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20270
fragaria_vesca	FvH4_3g13410
malus_domestica	MD05G1241900.v1.1 MD10G1223800.v1.1
prunus_persica	Prupe.4G121500_v2.0.a1
pyrus_communis	pycom05g21850 pycom10g18770 pycom10g18780
rosa_chinensis	RchiOBHm_Chr5g0022141
rosa_laevigata	RLG00000032647
rosa_multiflora	Rmu_sc0000491.1_g000007
rosa_roxburghii	Rroxscaffold_1G00056790
rosa_rugosa	Rorug05G0071500.1
rosa_samantha	Rh5AG159600 Rh5BG159100 Rh5CG173300 Rh5DG159100
rosa_wichuraiana	Rw5G014250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	914
AccB1I	GGYRCC	1 cut(s)	2256
AccB7I	CCANNNNNTGG	2 cut(s)	560, 1577
AccI	GTMKAC	1 cut(s)	1103
AccII	CGCG	1 cut(s)	936
AciI	CCGC	2 cut(s)	934, 2046
AclWI	GGATC	3 cut(s)	125, 976, 1273
AcsI	RAATTY	9 cut(s)	342, 413, 1438, 1491, 1656, 1934, 2023, 2063, 2232
AcuI	CTGAAG	5 cut(s)	520, 527, 809, 1178, 1836
AfaI	GTAC	4 cut(s)	1368, 1588, 1782, 2324
AfeI	AGCGCT	1 cut(s)	512
AfiI	CCNNNNNNNGG	6 cut(s)	560, 707, 779, 1577, 1714, 1790
AflIII	ACRYGT	1 cut(s)	1680
AjnI	CCWGG	1 cut(s)	356
Alw21I	GWGCWC	2 cut(s)	435, 1302
Alw26I	GTCTC	7 cut(s)	76, 879, 900, 1899, 1923, 2294, 2381
AlwI	GGATC	3 cut(s)	125, 976, 1273
Aor51HI	AGCGCT	1 cut(s)	512
AoxI	GGCC	4 cut(s)	1193, 1507, 1957, 2218
ApeKI	GCWGC	5 cut(s)	543, 1003, 1315, 1560, 2414
ApoI	RAATTY	9 cut(s)	342, 413, 1438, 1491, 1656, 1934, 2023, 2063, 2232
ArsI	GACNNNNNNTTYG	2 cut(s)	398, 430
Asp700I	GAANNNNTTC	2 cut(s)	956, 1673
AspLEI	GCGC	1 cut(s)	513
AspS9I	GGNCC	3 cut(s)	1193, 1631, 1725
AsuHPI	GGTGA	8 cut(s)	255, 1133, 1226, 1410, 1875, 2026, 2035, 2357
AsuII	TTCGAA	1 cut(s)	2027
AsuNHI	GCTAGC	1 cut(s)	2278
AvaII	GGWCC	2 cut(s)	1631, 1725
AxyI	CCTNAGG	1 cut(s)	1713
BanI	GGYRCC	1 cut(s)	2256
BanII	GRGCYC	3 cut(s)	435, 764, 1302
BarI	GAAGNNNNNNTAC	2 cut(s)	2496, 2528
BbsI	GAAGAC	2 cut(s)	4, 2082
Bbv12I	GWGCWC	2 cut(s)	435, 1302
BbvCI	CCTCAGC	1 cut(s)	206
BbvI	GCAGC	5 cut(s)	555, 990, 1302, 1572, 2426
BccI	CCATC	3 cut(s)	680, 1303, 1504
BciT130I	CCWGG	1 cut(s)	358
BciVI	GTATCC	1 cut(s)	704
BclI	TGATCA	1 cut(s)	67
BcoDI	GTCTC	7 cut(s)	76, 879, 900, 1899, 1923, 2294, 2381
BfaI	CTAG	7 cut(s)	797, 1229, 1446, 1604, 2060, 2279, 2391
BfmI	CTRYAG	1 cut(s)	1316
BfoI	RGCGCY	1 cut(s)	514
BfuI	GTATCC	1 cut(s)	704
BisI	GCNGC	5 cut(s)	544, 1004, 1316, 1561, 2415
BlpI	GCTNAGC	3 cut(s)	420, 846, 999
BlsI	GCNGC	5 cut(s)	545, 1005, 1317, 1562, 2416
Bme1390I	CCNGG	1 cut(s)	358
Bme18I	GGWCC	2 cut(s)	1631, 1725
BmgT120I	GGNCC	3 cut(s)	1193, 1631, 1725
BmiI	GGNNCC	4 cut(s)	835, 1691, 1726, 2258
BmrFI	CCNGG	1 cut(s)	358
BmrI	ACTGGG	1 cut(s)	418
BmsI	GCATC	5 cut(s)	436, 555, 1436, 1572, 2100
BmtI	GCTAGC	1 cut(s)	2282
BmuI	ACTGGG	1 cut(s)	418
BpiI	GAAGAC	2 cut(s)	4, 2082
BpmI	CTGGAG	3 cut(s)	1068, 1506, 1554
Bpu10I	CCTNAGC	3 cut(s)	206, 774, 1296
Bpu1102I	GCTNAGC	3 cut(s)	420, 846, 999
Bpu14I	TTCGAA	1 cut(s)	2027
BpuEI	CTTGAG	7 cut(s)	880, 889, 1381, 1629, 1630, 1897, 1905
BsaI	GGTCTC	3 cut(s)	879, 1923, 2294
BsaJI	CCNNGG	2 cut(s)	356, 1927
BsaWI	WCCGGW	2 cut(s)	2259, 2271
Bsc4I	CCNNNNNNNGG	6 cut(s)	560, 707, 779, 1577, 1714, 1790
Bse118I	RCCGGY	1 cut(s)	1509
Bse1I	ACTGG	6 cut(s)	413, 1051, 1089, 1123, 1339, 1489
Bse21I	CCTNAGG	1 cut(s)	1713
BseBI	CCWGG	1 cut(s)	358
BseDI	CCNNGG	2 cut(s)	356, 1927
BseGI	GGATG	4 cut(s)	546, 909, 1563, 2476
BseLI	CCNNNNNNNGG	6 cut(s)	560, 707, 779, 1577, 1714, 1790
BseNI	ACTGG	6 cut(s)	413, 1051, 1089, 1123, 1339, 1489
BseRI	GAGGAG	1 cut(s)	2032
BseXI	GCAGC	5 cut(s)	555, 990, 1302, 1572, 2426
BseYI	CCCAGC	4 cut(s)	334, 778, 1243, 2126
Bsh1236I	CGCG	1 cut(s)	936
BshFI	GGCC	4 cut(s)	1195, 1509, 1959, 2220
BshNI	GGYRCC	1 cut(s)	2256
BsiHKAI	GWGCWC	2 cut(s)	435, 1302
BsiSI	CCGG	3 cut(s)	1510, 2260, 2272
BslFI	GGGAC	1 cut(s)	1112
BslI	CCNNNNNNNGG	6 cut(s)	560, 707, 779, 1577, 1714, 1790
BsmAI	GTCTC	7 cut(s)	76, 879, 900, 1899, 1923, 2294, 2381
BsmFI	GGGAC	1 cut(s)	1112
BsnI	GGCC	4 cut(s)	1195, 1509, 1959, 2220
Bso31I	GGTCTC	3 cut(s)	879, 1923, 2294
Bsp119I	TTCGAA	1 cut(s)	2027
Bsp1286I	GDGCHC	3 cut(s)	435, 764, 1302
Bsp143I	GATC	9 cut(s)	67, 130, 212, 604, 880, 981, 1096, 1207, 1265
Bsp1720I	GCTNAGC	3 cut(s)	420, 846, 999
BspACI	CCGC	2 cut(s)	934, 2046
BspANI	GGCC	4 cut(s)	1195, 1509, 1959, 2220
BspFNI	CGCG	1 cut(s)	936
BspHI	TCATGA	2 cut(s)	988, 2209
BspLI	GGNNCC	4 cut(s)	835, 1691, 1726, 2258
BspMAI	CTGCAG	1 cut(s)	1320
BspOI	GCTAGC	1 cut(s)	2282
BspPI	GGATC	3 cut(s)	125, 976, 1273
BspQI	GCTCTTC	1 cut(s)	2209
BspT104I	TTCGAA	1 cut(s)	2027
BspT107I	GGYRCC	1 cut(s)	2256
BspTNI	GGTCTC	3 cut(s)	879, 1923, 2294
BsrFI	RCCGGY	1 cut(s)	1509
BsrI	ACTGG	6 cut(s)	413, 1051, 1089, 1123, 1339, 1489
BssAI	RCCGGY	1 cut(s)	1509
BssECI	CCNNGG	2 cut(s)	356, 1927
BssMI	GATC	9 cut(s)	67, 130, 212, 604, 880, 981, 1096, 1207, 1265
BssT1I	CCWWGG	1 cut(s)	1927
Bst2UI	CCWGG	1 cut(s)	358
Bst4CI	ACNGT	2 cut(s)	749, 1586
Bst6I	CTCTTC	4 cut(s)	1727, 1855, 2209, 2357
BstBI	TTCGAA	1 cut(s)	2027
BstC8I	GCNNGC	4 cut(s)	938, 1451, 2162, 2280
BstEII	GGTNACC	1 cut(s)	1416
BstENI	CCTNNNNNAGG	1 cut(s)	1712
BstF5I	GGATG	4 cut(s)	546, 909, 1563, 2476
BstFNI	CGCG	1 cut(s)	936
BstH2I	RGCGCY	1 cut(s)	514
BstHHI	GCGC	1 cut(s)	513
BstKTI	GATC	9 cut(s)	70, 133, 215, 607, 883, 984, 1099, 1210, 1268
BstMAI	GTCTC	7 cut(s)	76, 879, 900, 1899, 1923, 2294, 2381
BstMBI	GATC	9 cut(s)	67, 130, 212, 604, 880, 981, 1096, 1207, 1265
BstMWI	GCNNNNNNNGC	7 cut(s)	358, 430, 439, 759, 1384, 1991, 2411
BstNI	CCWGG	1 cut(s)	358
BstNSI	RCATGY	1 cut(s)	2329
BstPI	GGTNACC	1 cut(s)	1416
BstSCI	CCNGG	1 cut(s)	356
BstSFI	CTRYAG	1 cut(s)	1316
BstUI	CGCG	1 cut(s)	936
BstV1I	GCAGC	5 cut(s)	555, 990, 1302, 1572, 2426
BstV2I	GAAGAC	2 cut(s)	4, 2082
BstX2I	RGATCY	2 cut(s)	130, 981
BstXI	CCANNNNNNTGG	1 cut(s)	1628
BstYI	RGATCY	2 cut(s)	130, 981
Bsu36I	CCTNAGG	1 cut(s)	1713
BsuI	GTATCC	1 cut(s)	704
BsuRI	GGCC	4 cut(s)	1195, 1509, 1959, 2220
BtsCI	GGATG	4 cut(s)	546, 909, 1563, 2476
BtsIMutI	CAGTG	6 cut(s)	222, 544, 616, 835, 1044, 1116
Cac8I	GCNNGC	4 cut(s)	938, 1451, 2162, 2280
CciI	TCATGA	2 cut(s)	988, 2209
CfoI	GCGC	1 cut(s)	513
Cfr10I	RCCGGY	1 cut(s)	1509
Cfr13I	GGNCC	3 cut(s)	1193, 1631, 1725
Csp6I	GTAC	4 cut(s)	1367, 1587, 1781, 2323
CviQI	GTAC	4 cut(s)	1367, 1587, 1781, 2323
DpnI	GATC	9 cut(s)	69, 132, 214, 606, 882, 983, 1098, 1209, 1267
DpnII	GATC	9 cut(s)	67, 130, 212, 604, 880, 981, 1096, 1207, 1265
DrdI	GACNNNNNNGTC	1 cut(s)	914
DseDI	GACNNNNNNGTC	1 cut(s)	914
Eam1104I	CTCTTC	4 cut(s)	1727, 1855, 2209, 2357
EarI	CTCTTC	4 cut(s)	1727, 1855, 2209, 2357
Ecl136II	GAGCTC	2 cut(s)	433, 1300
Eco130I	CCWWGG	1 cut(s)	1927
Eco147I	AGGCCT	1 cut(s)	1959
Eco24I	GRGCYC	3 cut(s)	435, 764, 1302
Eco31I	GGTCTC	3 cut(s)	879, 1923, 2294
Eco32I	GATATC	2 cut(s)	271, 2375
Eco47I	GGWCC	2 cut(s)	1631, 1725
Eco47III	AGCGCT	1 cut(s)	512
Eco53kI	GAGCTC	2 cut(s)	433, 1300
Eco57I	CTGAAG	5 cut(s)	520, 527, 809, 1178, 1836
Eco81I	CCTNAGG	1 cut(s)	1713
Eco91I	GGTNACC	1 cut(s)	1416
EcoICRI	GAGCTC	2 cut(s)	433, 1300
EcoNI	CCTNNNNNAGG	1 cut(s)	1712
EcoO109I	RGGNCCY	1 cut(s)	1725
EcoO65I	GGTNACC	1 cut(s)	1416
EcoRI	GAATTC	2 cut(s)	342, 2023
EcoRII	CCWGG	1 cut(s)	356
EcoRV	GATATC	2 cut(s)	271, 2375
EcoT14I	CCWWGG	1 cut(s)	1927
EcoT22I	ATGCAT	1 cut(s)	2513
EcoT38I	GRGCYC	3 cut(s)	435, 764, 1302
ErhI	CCWWGG	1 cut(s)	1927
FalI	AAGNNNNNCTT	3 cut(s)	28, 1931, 1963
FaqI	GGGAC	1 cut(s)	1112
FbaI	TGATCA	1 cut(s)	67
FblI	GTMKAC	1 cut(s)	1103
Fnu4HI	GCNGC	5 cut(s)	544, 1004, 1316, 1561, 2415
FokI	GGATG	4 cut(s)	533, 896, 1550, 2483
FriOI	GRGCYC	3 cut(s)	435, 764, 1302
Fsp4HI	GCNGC	5 cut(s)	544, 1004, 1316, 1561, 2415
FspBI	CTAG	7 cut(s)	797, 1229, 1446, 1604, 2060, 2279, 2391
GlaI	GCGC	1 cut(s)	512
GluI	GCNGC	5 cut(s)	544, 1004, 1316, 1561, 2415
GsaI	CCCAGC	4 cut(s)	338, 782, 1247, 2130
GsuI	CTGGAG	3 cut(s)	1068, 1506, 1554
HaeII	RGCGCY	1 cut(s)	514
HaeIII	GGCC	4 cut(s)	1195, 1509, 1959, 2220
HapII	CCGG	3 cut(s)	1510, 2260, 2272
HhaI	GCGC	1 cut(s)	513
Hin6I	GCGC	1 cut(s)	511
HinP1I	GCGC	1 cut(s)	511
HincII	GTYRAC	1 cut(s)	1340
HindII	GTYRAC	1 cut(s)	1340
HindIII	AAGCTT	5 cut(s)	350, 1064, 1376, 1940, 2338
HinfI	GANTC	9 cut(s)	73, 1168, 1390, 1456, 1735, 1847, 1892, 2190, 2458
HpaII	CCGG	3 cut(s)	1510, 2260, 2272
HphI	GGTGA	8 cut(s)	255, 1133, 1226, 1410, 1875, 2026, 2035, 2357
Hpy166II	GTNNAC	6 cut(s)	62, 473, 713, 1082, 1104, 1340
Hpy188I	TCNGA	9 cut(s)	72, 130, 524, 789, 1074, 1308, 1501, 2238, 2503
Hpy188III	TCNNGA	8 cut(s)	878, 949, 989, 1021, 1571, 1604, 2053, 2210
Hpy8I	GTNNAC	6 cut(s)	62, 473, 713, 1082, 1104, 1340
HpyAV	CCTTC	4 cut(s)	144, 1068, 1143, 2059
HpyCH4III	ACNGT	2 cut(s)	749, 1586
HpyCH4IV	ACGT	2 cut(s)	231, 1680
HpyF10VI	GCNNNNNNNGC	7 cut(s)	358, 430, 439, 759, 1384, 1991, 2411
HpySE526I	ACGT	2 cut(s)	231, 1680
HspAI	GCGC	1 cut(s)	511
Ksp22I	TGATCA	1 cut(s)	67
Kzo9I	GATC	9 cut(s)	67, 130, 212, 604, 880, 981, 1096, 1207, 1265
LguI	GCTCTTC	1 cut(s)	2209
LmnI	GCTCC	4 cut(s)	430, 1049, 1312, 2123
Lsp1109I	GCAGC	5 cut(s)	555, 990, 1302, 1572, 2426
LweI	GCATC	5 cut(s)	436, 555, 1436, 1572, 2100
MaeI	CTAG	7 cut(s)	797, 1229, 1446, 1604, 2060, 2279, 2391
MaeII	ACGT	2 cut(s)	231, 1680
MaeIII	GTNAC	7 cut(s)	197, 487, 570, 1220, 1416, 1844, 2429
MalI	GATC	9 cut(s)	69, 132, 214, 606, 882, 983, 1098, 1209, 1267
MboI	GATC	9 cut(s)	67, 130, 212, 604, 880, 981, 1096, 1207, 1265
MflI	RGATCY	2 cut(s)	130, 981
MhlI	GDGCHC	3 cut(s)	435, 764, 1302
MlyI	GAGTC	4 cut(s)	67, 1744, 1841, 1901
MmeI	TCCRAC	4 cut(s)	405, 1512, 1902, 2505
Mph1103I	ATGCAT	1 cut(s)	2513
MroXI	GAANNNNTTC	2 cut(s)	956, 1673
MseI	TTAA	6 cut(s)	579, 1697, 1809, 2153, 2175, 2397
MslI	CAYNNNNRTG	3 cut(s)	1307, 2214, 2469
MspA1I	CMGCKG	3 cut(s)	338, 658, 1387
MspI	CCGG	3 cut(s)	1510, 2260, 2272
MspR9I	CCNGG	1 cut(s)	358
MvaI	CCWGG	1 cut(s)	358
MvnI	CGCG	1 cut(s)	936
MwoI	GCNNNNNNNGC	7 cut(s)	358, 430, 439, 759, 1384, 1991, 2411
NdeII	GATC	9 cut(s)	67, 130, 212, 604, 880, 981, 1096, 1207, 1265
NheI	GCTAGC	1 cut(s)	2278
NlaIV	GGNNCC	4 cut(s)	835, 1691, 1726, 2258
NmuCI	GTSAC	6 cut(s)	197, 487, 570, 1220, 1416, 1844
NsiI	ATGCAT	1 cut(s)	2513
NspI	RCATGY	1 cut(s)	2329
NspV	TTCGAA	1 cut(s)	2027
PagI	TCATGA	2 cut(s)	988, 2209
PceI	AGGCCT	1 cut(s)	1959
PciSI	GCTCTTC	1 cut(s)	2209
PdmI	GAANNNNTTC	2 cut(s)	956, 1673
PfeI	GAWTC	5 cut(s)	1168, 1390, 1456, 2190, 2458
PflMI	CCANNNNNTGG	2 cut(s)	560, 1577
PkrI	GCNGC	5 cut(s)	545, 1005, 1317, 1562, 2416
PleI	GAGTC	4 cut(s)	67, 1743, 1841, 1900
PpsI	GAGTC	4 cut(s)	67, 1743, 1841, 1900
PpuMI	RGGWCCY	1 cut(s)	1725
Psp124BI	GAGCTC	2 cut(s)	435, 1302
Psp5II	RGGWCCY	1 cut(s)	1725
Psp6I	CCWGG	1 cut(s)	356
PspEI	GGTNACC	1 cut(s)	1416
PspFI	CCCAGC	4 cut(s)	334, 778, 1243, 2126
PspGI	CCWGG	1 cut(s)	356
PspN4I	GGNNCC	4 cut(s)	835, 1691, 1726, 2258
PspPI	GGNCC	3 cut(s)	1193, 1631, 1725
PspPPI	RGGWCCY	1 cut(s)	1725
PstI	CTGCAG	1 cut(s)	1320
PsuI	RGATCY	2 cut(s)	130, 981
PvuII	CAGCTG	3 cut(s)	338, 658, 1387
RsaI	GTAC	4 cut(s)	1368, 1588, 1782, 2324
RsaNI	GTAC	4 cut(s)	1367, 1587, 1781, 2323
RseI	CAYNNNNRTG	3 cut(s)	1307, 2214, 2469
SacI	GAGCTC	2 cut(s)	435, 1302
SapI	GCTCTTC	1 cut(s)	2209
SaqAI	TTAA	6 cut(s)	579, 1697, 1809, 2153, 2175, 2397
SatI	GCNGC	5 cut(s)	544, 1004, 1316, 1561, 2415
Sau3AI	GATC	9 cut(s)	67, 130, 212, 604, 880, 981, 1096, 1207, 1265
Sau96I	GGNCC	3 cut(s)	1193, 1631, 1725
SchI	GAGTC	4 cut(s)	67, 1744, 1841, 1901
ScrFI	CCNGG	1 cut(s)	358
SduI	GDGCHC	3 cut(s)	435, 764, 1302
SfaNI	GCATC	5 cut(s)	436, 555, 1436, 1572, 2100
SfcI	CTRYAG	1 cut(s)	1316
SfuI	TTCGAA	1 cut(s)	2027
SinI	GGWCC	2 cut(s)	1631, 1725
SmiMI	CAYNNNNRTG	3 cut(s)	1307, 2214, 2469
SmlI	CTYRAG	7 cut(s)	859, 868, 1396, 1609, 1644, 1912, 1920
SmoI	CTYRAG	7 cut(s)	859, 868, 1396, 1609, 1644, 1912, 1920
SseBI	AGGCCT	1 cut(s)	1959
SsiI	CCGC	2 cut(s)	934, 2046
SspMI	CTAG	7 cut(s)	797, 1229, 1446, 1604, 2060, 2279, 2391
SstI	GAGCTC	2 cut(s)	435, 1302
StuI	AGGCCT	1 cut(s)	1959
StyD4I	CCNGG	1 cut(s)	356
StyI	CCWWGG	1 cut(s)	1927
TaaI	ACNGT	2 cut(s)	749, 1586
TaiI	ACGT	2 cut(s)	234, 1683
TaqI	TCGA	3 cut(s)	236, 918, 2027
TatI	WGTACW	1 cut(s)	2322
TfiI	GAWTC	5 cut(s)	1168, 1390, 1456, 2190, 2458
Tru1I	TTAA	6 cut(s)	579, 1697, 1809, 2153, 2175, 2397
Tru9I	TTAA	6 cut(s)	579, 1697, 1809, 2153, 2175, 2397
TscAI	CASTG	6 cut(s)	222, 544, 616, 835, 1051, 1123
TseFI	GTSAC	6 cut(s)	197, 487, 570, 1220, 1416, 1844
TseI	GCWGC	5 cut(s)	543, 1003, 1315, 1560, 2414
Tsp45I	GTSAC	6 cut(s)	197, 487, 570, 1220, 1416, 1844
TspDTI	ATGAA	8 cut(s)	17, 28, 607, 949, 962, 1005, 1962, 2453
TspRI	CASTG	6 cut(s)	222, 544, 616, 835, 1051, 1123
Van91I	CCANNNNNTGG	2 cut(s)	560, 1577
VpaK11BI	GGWCC	2 cut(s)	1631, 1725
XagI	CCTNNNNNAGG	1 cut(s)	1712
XapI	RAATTY	9 cut(s)	342, 413, 1438, 1491, 1656, 1934, 2023, 2063, 2232
XbaI	TCTAGA	1 cut(s)	1603
XceI	RCATGY	1 cut(s)	2329
XmiI	GTMKAC	1 cut(s)	1103
XmnI	GAANNNNTTC	2 cut(s)	956, 1673
XspI	CTAG	7 cut(s)	797, 1229, 1446, 1604, 2060, 2279, 2391
Zsp2I	ATGCAT	1 cut(s)	2513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.